Query 035158
Match_columns 72
No_of_seqs 115 out of 692
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 09:41:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035158.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035158hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03151 TPT: Triose-phosphate 99.8 1E-20 2.2E-25 119.4 6.7 69 2-70 85-153 (153)
2 KOG1441 Glucose-6-phosphate/ph 99.8 5.8E-21 1.3E-25 136.9 1.6 70 3-72 240-309 (316)
3 PTZ00343 triose or hexose phos 99.6 1E-15 2.2E-20 109.7 7.7 71 2-72 280-350 (350)
4 KOG1444 Nucleotide-sugar trans 99.3 3.2E-12 7E-17 91.8 4.8 71 1-72 231-302 (314)
5 TIGR00817 tpt Tpt phosphate/ph 99.3 1E-11 2.3E-16 86.3 5.5 66 7-72 230-295 (302)
6 KOG1443 Predicted integral mem 99.2 1E-11 2.2E-16 89.7 4.9 68 2-69 247-314 (349)
7 KOG1442 GDP-fucose transporter 99.0 1E-11 2.2E-16 89.0 -4.2 72 1-72 258-329 (347)
8 PF08449 UAA: UAA transporter 99.0 1.8E-09 4E-14 75.6 7.3 71 2-72 229-299 (303)
9 PF04142 Nuc_sug_transp: Nucle 98.2 8.5E-06 1.8E-10 56.5 6.5 69 2-70 21-89 (244)
10 COG5070 VRG4 Nucleotide-sugar 97.9 8.8E-06 1.9E-10 57.7 3.4 72 1-72 227-298 (309)
11 PF00892 EamA: EamA-like trans 97.8 0.00012 2.6E-09 43.4 6.1 62 8-69 64-125 (126)
12 TIGR00803 nst UDP-galactose tr 97.8 1.8E-05 3.9E-10 53.0 2.5 58 11-68 165-222 (222)
13 KOG1583 UDP-N-acetylglucosamin 97.7 2.6E-05 5.7E-10 56.3 2.7 69 2-70 246-314 (330)
14 TIGR00688 rarD rarD protein. T 97.6 0.00048 1E-08 46.8 7.4 65 3-67 75-139 (256)
15 KOG1580 UDP-galactose transpor 97.5 0.00012 2.6E-09 52.4 3.7 62 5-66 248-309 (337)
16 PF13536 EmrE: Multidrug resis 97.5 0.0013 2.8E-08 40.1 7.6 65 4-69 40-105 (113)
17 TIGR00950 2A78 Carboxylate/Ami 97.5 0.00073 1.6E-08 45.4 6.9 66 4-69 53-118 (260)
18 PRK15430 putative chlorampheni 97.4 0.0012 2.5E-08 46.2 7.6 66 3-68 78-143 (296)
19 PLN00411 nodulin MtN21 family 97.4 0.00096 2.1E-08 48.6 7.3 65 3-67 83-153 (358)
20 TIGR00817 tpt Tpt phosphate/ph 97.3 0.0011 2.5E-08 46.0 6.9 66 3-68 70-135 (302)
21 TIGR00950 2A78 Carboxylate/Ami 97.3 0.0014 3.1E-08 43.9 6.9 56 10-65 204-259 (260)
22 PRK10532 threonine and homoser 97.3 0.0023 5.1E-08 44.5 7.9 58 14-71 225-282 (293)
23 PRK11689 aromatic amino acid e 97.2 0.0023 5E-08 44.6 7.7 60 8-67 225-284 (295)
24 TIGR03340 phn_DUF6 phosphonate 97.2 0.0022 4.8E-08 44.3 7.0 65 3-67 68-132 (281)
25 PRK15051 4-amino-4-deoxy-L-ara 97.0 0.0022 4.8E-08 39.7 5.1 43 25-68 65-107 (111)
26 PLN00411 nodulin MtN21 family 97.0 0.0052 1.1E-07 44.8 7.7 58 14-71 272-329 (358)
27 PRK11272 putative DMT superfam 96.9 0.0084 1.8E-07 41.7 7.7 58 13-70 228-285 (292)
28 PRK15430 putative chlorampheni 96.9 0.01 2.2E-07 41.4 8.0 59 10-68 225-283 (296)
29 PRK09541 emrE multidrug efflux 96.8 0.004 8.7E-08 38.8 5.2 46 25-70 58-103 (110)
30 PRK11431 multidrug efflux syst 96.8 0.0046 1E-07 38.3 5.2 46 24-69 56-101 (105)
31 PRK10650 multidrug efflux syst 96.7 0.0055 1.2E-07 38.2 5.3 46 24-69 62-107 (109)
32 PTZ00343 triose or hexose phos 96.7 0.0098 2.1E-07 42.8 7.2 65 3-67 119-183 (350)
33 KOG2234 Predicted UDP-galactos 96.7 0.0065 1.4E-07 44.7 6.1 67 3-69 97-163 (345)
34 PRK10452 multidrug efflux syst 96.6 0.0062 1.3E-07 38.6 5.1 45 25-69 58-102 (120)
35 COG2076 EmrE Membrane transpor 96.6 0.0097 2.1E-07 37.2 5.5 47 24-70 57-103 (106)
36 TIGR03340 phn_DUF6 phosphonate 96.5 0.0042 9E-08 42.9 4.1 60 8-67 221-280 (281)
37 PF06027 DUF914: Eukaryotic pr 96.4 0.014 3E-07 42.6 6.3 63 5-67 86-148 (334)
38 PRK11453 O-acetylserine/cystei 96.2 0.04 8.7E-07 38.4 7.7 53 16-68 233-285 (299)
39 KOG1581 UDP-galactose transpor 96.2 0.0043 9.4E-08 45.2 2.9 64 7-70 250-313 (327)
40 PRK11689 aromatic amino acid e 96.1 0.04 8.7E-07 38.4 7.4 47 21-67 88-134 (295)
41 COG0697 RhaT Permeases of the 96.1 0.045 9.7E-07 36.4 7.3 65 5-69 77-142 (292)
42 PF08449 UAA: UAA transporter 96.1 0.039 8.5E-07 38.7 7.1 67 4-70 70-136 (303)
43 TIGR00776 RhaT RhaT L-rhamnose 96.0 0.049 1.1E-06 38.2 7.4 69 4-72 217-290 (290)
44 PRK02971 4-amino-4-deoxy-L-ara 96.0 0.082 1.8E-06 33.6 7.8 34 37-70 87-122 (129)
45 COG0697 RhaT Permeases of the 95.7 0.11 2.5E-06 34.5 7.7 60 11-70 228-287 (292)
46 KOG3912 Predicted integral mem 95.6 0.012 2.6E-07 43.1 3.0 61 10-70 274-334 (372)
47 PRK11453 O-acetylserine/cystei 95.6 0.12 2.7E-06 35.9 7.9 54 14-67 75-129 (299)
48 PF06027 DUF914: Eukaryotic pr 95.5 0.037 8E-07 40.4 5.2 56 16-71 251-306 (334)
49 PRK11272 putative DMT superfam 94.8 0.29 6.3E-06 34.0 7.9 56 12-68 83-139 (292)
50 COG2510 Predicted membrane pro 94.6 0.028 6E-07 36.7 2.2 34 35-68 104-137 (140)
51 PF00893 Multi_Drug_Res: Small 94.6 0.061 1.3E-06 32.1 3.5 53 8-60 38-92 (93)
52 KOG2765 Predicted membrane pro 94.4 0.069 1.5E-06 40.1 4.1 66 4-69 165-230 (416)
53 TIGR00776 RhaT RhaT L-rhamnose 93.3 0.35 7.6E-06 33.9 5.9 61 10-70 71-136 (290)
54 KOG4510 Permease of the drug/m 91.3 0.073 1.6E-06 38.8 0.5 65 3-67 102-166 (346)
55 KOG1582 UDP-galactose transpor 90.3 1.9 4.2E-05 31.7 6.9 64 5-68 267-330 (367)
56 PF04657 DUF606: Protein of un 86.6 6.3 0.00014 25.1 7.1 66 2-67 68-138 (138)
57 PF10639 UPF0546: Uncharacteri 84.4 0.91 2E-05 28.5 2.2 61 7-67 46-111 (113)
58 COG2962 RarD Predicted permeas 83.9 1.3 2.8E-05 32.2 3.0 46 23-68 97-142 (293)
59 PF05653 Mg_trans_NIPA: Magnes 83.1 2.9 6.3E-05 29.9 4.5 55 13-67 65-119 (300)
60 COG2962 RarD Predicted permeas 80.1 7.3 0.00016 28.3 5.7 50 21-70 234-283 (293)
61 COG5006 rhtA Threonine/homoser 78.2 9.6 0.00021 27.7 5.8 53 14-66 226-278 (292)
62 KOG4314 Predicted carbohydrate 71.8 4.3 9.4E-05 28.8 2.7 59 12-70 67-125 (290)
63 KOG2234 Predicted UDP-galactos 64.3 34 0.00073 25.5 6.1 55 17-71 269-323 (345)
64 KOG3912 Predicted integral mem 64.1 25 0.00054 26.2 5.4 57 11-67 99-155 (372)
65 PF04142 Nuc_sug_transp: Nucle 63.4 9.8 0.00021 26.3 3.1 46 15-60 198-243 (244)
66 KOG2766 Predicted membrane pro 54.2 1.6 3.4E-05 31.9 -2.2 48 20-67 100-147 (336)
67 PF05961 Chordopox_A13L: Chord 50.7 16 0.00034 21.2 2.0 17 55-71 7-23 (68)
68 PF07444 Ycf66_N: Ycf66 protei 45.0 24 0.00053 21.1 2.3 21 49-69 4-24 (84)
69 PF06800 Sugar_transport: Suga 42.9 1.2E+02 0.0027 21.6 6.4 64 3-66 200-267 (269)
70 COG0342 SecD Preprotein transl 42.1 1.4E+02 0.003 23.2 6.5 60 3-63 347-406 (506)
71 PHA03049 IMV membrane protein; 41.2 29 0.00062 20.1 2.1 17 55-71 7-23 (68)
72 PF07857 DUF1632: CEO family ( 39.4 20 0.00044 25.3 1.6 23 50-72 114-136 (254)
73 KOG4812 Golgi-associated prote 33.1 1.9E+02 0.0041 20.9 5.7 63 2-67 164-236 (262)
74 KOG4782 Predicted membrane pro 31.8 25 0.00054 21.8 0.9 24 46-69 57-80 (108)
75 KOG1581 UDP-galactose transpor 31.6 93 0.002 23.1 4.0 60 12-71 97-156 (327)
76 COG3296 Uncharacterized protei 31.3 1.3E+02 0.0028 19.8 4.2 32 35-66 76-107 (143)
77 PF04342 DUF486: Protein of un 30.3 54 0.0012 20.6 2.2 34 32-65 66-103 (108)
78 PF15061 DUF4538: Domain of un 26.1 67 0.0015 18.0 1.9 17 54-70 9-25 (58)
79 KOG2922 Uncharacterized conser 25.7 12 0.00026 27.8 -1.5 37 30-66 96-132 (335)
80 PRK10532 threonine and homoser 25.2 2.3E+02 0.0051 19.4 7.1 27 5-31 78-104 (293)
81 PRK02237 hypothetical protein; 22.4 2.1E+02 0.0046 18.0 4.5 42 26-67 61-102 (109)
82 KOG2765 Predicted membrane pro 22.1 1.7E+02 0.0036 22.5 3.9 59 12-70 332-390 (416)
83 COG3238 Uncharacterized protei 21.8 2.5E+02 0.0053 18.5 5.9 68 3-70 74-146 (150)
84 PF14576 SEO_N: Sieve element 21.4 85 0.0018 22.8 2.2 31 5-36 117-150 (286)
85 PF02694 UPF0060: Uncharacteri 20.6 2.3E+02 0.005 17.7 4.4 41 27-67 60-100 (107)
86 PF07479 NAD_Gly3P_dh_C: NAD-d 20.1 1.4E+02 0.0031 19.1 2.9 21 25-45 4-24 (149)
No 1
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.83 E-value=1e-20 Score=119.44 Aligned_cols=69 Identities=33% Similarity=0.565 Sum_probs=67.6
Q ss_pred hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
+.+|++++++|+++|.+++++||+|++|.|++|+++++..|+++|+|++|+.|+.|+.+++.|..+|+|
T Consensus 85 ~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 85 ILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 578999999999999999999999999999999999999999999999999999999999999999987
No 2
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.81 E-value=5.8e-21 Score=136.87 Aligned_cols=70 Identities=30% Similarity=0.478 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK 72 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k 72 (72)
.+..++|++|++.|+++++|||+|++|+|++||++++..|+++|+||+|+.|+.|+.+|+.|+.+|++.|
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k 309 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK 309 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence 4558999999999999999999999999999999999999999999999999999999999999999986
No 3
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.63 E-value=1e-15 Score=109.70 Aligned_cols=71 Identities=21% Similarity=0.395 Sum_probs=69.0
Q ss_pred hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158 2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK 72 (72)
Q Consensus 2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k 72 (72)
+.+|+.+|++|.++|..++++||+|+++.+++|+++.++.|+++|||++|+.|++|.++++.|+.+|++.|
T Consensus 280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999987
No 4
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.30 E-value=3.2e-12 Score=91.85 Aligned_cols=71 Identities=28% Similarity=0.413 Sum_probs=68.0
Q ss_pred ChhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCC-cccchhhHHHHHHHHHHhhhhhcC
Q 035158 1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHD-EFTWLKGFGLFTILVGVSLFNWYK 72 (72)
Q Consensus 1 ll~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~-~~t~~~~~G~~i~~~G~~~Y~~~k 72 (72)
+.+||+++|..|++.+++...+|++|++++| .|+.+...++.+.++| |+++.|.+|+.+.+.|..+|++.|
T Consensus 231 ~~lScv~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~ 302 (314)
T KOG1444|consen 231 MLLSCVMGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT 302 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence 4689999999999999999999999999999 9999999999999988 999999999999999999999874
No 5
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.25 E-value=1e-11 Score=86.28 Aligned_cols=66 Identities=24% Similarity=0.407 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158 7 LAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK 72 (72)
Q Consensus 7 ~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k 72 (72)
..++.|...|..++++||.|.++.+.+|.+..+..|++++||++|+.+++|.++++.|+.+|++.|
T Consensus 230 ~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k 295 (302)
T TIGR00817 230 FFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295 (302)
T ss_pred HHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 455677899999999999999999999999999999999999999999999999999999999875
No 6
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.24 E-value=1e-11 Score=89.65 Aligned_cols=68 Identities=38% Similarity=0.616 Sum_probs=65.7
Q ss_pred hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158 2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
.+.|.++|++-.+||.+..+||.+|.|++|++||+.++..+..+-+|+++..|++|..+++.|+..|.
T Consensus 247 ~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 247 SLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 46799999999999999999999999999999999999999999999999999999999999999994
No 7
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.99 E-value=1e-11 Score=89.04 Aligned_cols=72 Identities=26% Similarity=0.273 Sum_probs=69.5
Q ss_pred ChhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158 1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK 72 (72)
Q Consensus 1 ll~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k 72 (72)
|.++|+++|.+|+.+++-|+.|||+||+|.|..|.+.+.++++.+++|.-+..-|-|-.+.+.|..+|.+.|
T Consensus 258 mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 258 MTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK 329 (347)
T ss_pred HHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999875
No 8
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.99 E-value=1.8e-09 Score=75.60 Aligned_cols=71 Identities=23% Similarity=0.318 Sum_probs=65.9
Q ss_pred hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158 2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK 72 (72)
Q Consensus 2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k 72 (72)
+++++.+..-+...+.+++++||+|.++..+++..+.+.+|+++|++++++.++.|+.+.+.|..+|++.|
T Consensus 229 ~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~ 299 (303)
T PF08449_consen 229 LLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK 299 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence 45677777777888999999999999999999999999999999999999999999999999999999875
No 9
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=98.15 E-value=8.5e-06 Score=56.52 Aligned_cols=69 Identities=20% Similarity=0.244 Sum_probs=65.4
Q ss_pred hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
.+++++....|...|....+..|-|+++..+.|-+.+-++++++++.+++.+||.++.+...|+...+.
T Consensus 21 ~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~ 89 (244)
T PF04142_consen 21 AVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQL 89 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeec
Confidence 568899999999999999999999999999999999999999999999999999999999999987654
No 10
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.94 E-value=8.8e-06 Score=57.65 Aligned_cols=72 Identities=17% Similarity=0.226 Sum_probs=68.3
Q ss_pred ChhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhcC
Q 035158 1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWYK 72 (72)
Q Consensus 1 ll~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~k 72 (72)
|+++|+.++...+++=+++..||+-|++..|.+.....-+.|.++|++|.+..++..+.+-......|++.|
T Consensus 227 m~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavak 298 (309)
T COG5070 227 MFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAK 298 (309)
T ss_pred HHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999998764
No 11
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.78 E-value=0.00012 Score=43.40 Aligned_cols=62 Identities=18% Similarity=0.328 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158 8 AFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 8 af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
...-+..-+...+++++-..+......-+.....++++++|++++.+++|..+.+.|+.+-+
T Consensus 64 ~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 64 TALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred eehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 35667778888999999999999999999999999999999999999999999999998754
No 12
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=97.77 E-value=1.8e-05 Score=53.04 Aligned_cols=58 Identities=12% Similarity=0.074 Sum_probs=54.0
Q ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158 11 MVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF 68 (72)
Q Consensus 11 ~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y 68 (72)
..++..+++++.++.+.+++....-++..++|+++||+++|+.++.|..+.+.|+..|
T Consensus 165 ~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 165 GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 3456788999999999999999999999999999999999999999999999998877
No 13
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=97.71 E-value=2.6e-05 Score=56.31 Aligned_cols=69 Identities=25% Similarity=0.444 Sum_probs=61.8
Q ss_pred hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
+.+++.-+.--=..|.+..++|+||-++.=+++.-+-...|++.|+||+|+.-++|..+...|..+|+-
T Consensus 246 l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 246 LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456666666666677888899999999999999999999999999999999999999999999999975
No 14
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.58 E-value=0.00048 Score=46.76 Aligned_cols=65 Identities=14% Similarity=0.145 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
..|++....+.+-+..++++++-+-++....--+.+.++++++++|+++.++++|..+++.|+.+
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~l 139 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVIS 139 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 35666666778888999999999999999999999999999999999999999999999999874
No 15
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.51 E-value=0.00012 Score=52.42 Aligned_cols=62 Identities=15% Similarity=0.214 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHh
Q 035158 5 GALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVS 66 (72)
Q Consensus 5 ~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~ 66 (72)
++.+.+-..+.|.-+.+.+|||-||.-+-+...+|++|+++|++|++.+||+|-.+.+.|..
T Consensus 248 ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~ 309 (337)
T KOG1580|consen 248 AIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALT 309 (337)
T ss_pred HHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhh
Confidence 45556667788999999999999999999999999999999999999999999999888764
No 16
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.47 E-value=0.0013 Score=40.11 Aligned_cols=65 Identities=22% Similarity=0.329 Sum_probs=51.5
Q ss_pred HHHHHH-HHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158 4 GGALAF-FMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 4 s~~~af-~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
.|.+.. .-+...+...+..++ .-++.-..--+...++|.++|+|++++.++.|..++++|+.+=.
T Consensus 40 ~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~ 105 (113)
T PF13536_consen 40 AGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIA 105 (113)
T ss_pred HHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHh
Confidence 345554 556666677777775 55566677888899999999999999999999999999998644
No 17
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.46 E-value=0.00073 Score=45.39 Aligned_cols=66 Identities=14% Similarity=-0.005 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158 4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 4 s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
+++...+.+...|..++++++-+-++.-...-+.+..++.++++|+++++++.|+.+++.|..+..
T Consensus 53 ~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~ 118 (260)
T TIGR00950 53 GALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL 118 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence 334445667888899999998888999999999999999999999999999999999999988753
No 18
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.41 E-value=0.0012 Score=46.16 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF 68 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y 68 (72)
.+++.....+.+.|..++++++-.-++....--+.+...++++++|++++++++|+.+++.|+.+-
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li 143 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ 143 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 344555567889999999999999999999999999999999999999999999999999998764
No 19
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.39 E-value=0.00096 Score=48.57 Aligned_cols=65 Identities=17% Similarity=0.297 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhh------cCCcccchhhHHHHHHHHHHhh
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFY------FHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~------f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
+.|++++..+...+.-.+.|||-.-++....--+.+.++++++ ++|+++..+++|+.+++.|+.+
T Consensus 83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~l 153 (358)
T PLN00411 83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALV 153 (358)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHH
Confidence 4566666677788999999999999999999999999999998 6999999999999999999875
No 20
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.33 E-value=0.0011 Score=46.01 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF 68 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y 68 (72)
..|++....+..++..++++|+-..++.-..--+.+..++.++++|+++.+++.|..+++.|+.+-
T Consensus 70 ~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~ 135 (302)
T TIGR00817 70 PVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA 135 (302)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence 345556677788999999999999999999999999999999999999999999999999998753
No 21
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.29 E-value=0.0014 Score=43.93 Aligned_cols=56 Identities=13% Similarity=0.130 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHH
Q 035158 10 FMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGV 65 (72)
Q Consensus 10 ~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~ 65 (72)
.-...-+..+++.++-+.++.....-+.....++++++|++++.++.|..+.+.|+
T Consensus 204 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 204 LAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 33445677899999999999999999999999999999999999999999999986
No 22
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.26 E-value=0.0023 Score=44.55 Aligned_cols=58 Identities=10% Similarity=0.130 Sum_probs=53.8
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhc
Q 035158 14 TEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWY 71 (72)
Q Consensus 14 ~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~ 71 (72)
.-+..+++.+|-+-++...+.-+.....|++++||++++.+++|.++.+.|.+.+++.
T Consensus 225 l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 4467899999999999999999999999999999999999999999999999988653
No 23
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.24 E-value=0.0023 Score=44.61 Aligned_cols=60 Identities=12% Similarity=0.047 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 8 AFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 8 af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
...-...-+..+++.+|...++...+.-++-+..|++++||++|+.+++|.++.+.|+..
T Consensus 225 t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~ 284 (295)
T PRK11689 225 MGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLL 284 (295)
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHH
Confidence 333445567889999999999999999999999999999999999999999999999754
No 24
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.18 E-value=0.0022 Score=44.30 Aligned_cols=65 Identities=11% Similarity=0.031 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
.+++.......+.+...+++++-.-++.....-+....+++++++|+++..+++|+.+.+.|+.+
T Consensus 68 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~l 132 (281)
T TIGR03340 68 ISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLV 132 (281)
T ss_pred HHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 45555666677777778888777777777788999999999999999999999999999999875
No 25
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.00 E-value=0.0022 Score=39.66 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158 25 VTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF 68 (72)
Q Consensus 25 lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y 68 (72)
..+.+.. .--+.+...|+++|||++|+++++|+.+.+.|+..=
T Consensus 65 ~Ay~~~~-l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 65 IAYPMLS-LNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 3344444 666788899999999999999999999999998764
No 26
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.00 E-value=0.0052 Score=44.79 Aligned_cols=58 Identities=12% Similarity=0.146 Sum_probs=53.2
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhc
Q 035158 14 TEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWY 71 (72)
Q Consensus 14 ~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~ 71 (72)
.-+..+++.+|..-++...+--++..+.|++++||++++.+++|.++.+.|+.+-++-
T Consensus 272 lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 272 IHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 3455899999999999999999999999999999999999999999999999886653
No 27
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=96.88 E-value=0.0084 Score=41.69 Aligned_cols=58 Identities=17% Similarity=0.116 Sum_probs=53.2
Q ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 13 STEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 13 ~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
..-+..+++.++-+-++.....-+.....|++++||++|+.+++|..+.+.|+.+-++
T Consensus 228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 4566778999999999999999999999999999999999999999999999987654
No 28
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=96.85 E-value=0.01 Score=41.39 Aligned_cols=59 Identities=14% Similarity=0.085 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158 10 FMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF 68 (72)
Q Consensus 10 ~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y 68 (72)
.-..+-+..+++.+|-+-+....+.-+.-+..|++++||++|+.+++|..+.+.|+...
T Consensus 225 i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~ 283 (296)
T PRK15430 225 VPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIF 283 (296)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 44556778899999999999999999999999999999999999999999998877654
No 29
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.83 E-value=0.004 Score=38.79 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 25 VTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 25 lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
+.|++-.-+-.+.+...|+++|+|++|+.+++|+.+.+.|+..-+.
T Consensus 58 iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 58 IAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4566666667888999999999999999999999999999987543
No 30
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.78 E-value=0.0046 Score=38.29 Aligned_cols=46 Identities=7% Similarity=0.079 Sum_probs=41.4
Q ss_pred hhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158 24 AVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 24 ~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
.+.|++-.-+-.+.+...|+++|+|++|+.+++|+.+.+.|+..-+
T Consensus 56 gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 56 GTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 4678888888899999999999999999999999999999998654
No 31
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.73 E-value=0.0055 Score=38.23 Aligned_cols=46 Identities=15% Similarity=0.218 Sum_probs=40.6
Q ss_pred hhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158 24 AVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 24 ~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
.+.|++-.-+-.+.+...|+++|+|++|+.+++|+.+.+.|+..=+
T Consensus 62 gvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 62 SVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3567787888889999999999999999999999999999997643
No 32
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=96.71 E-value=0.0098 Score=42.83 Aligned_cols=65 Identities=12% Similarity=0.273 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
.-|++.+..+...+..++.+|+-..++.-..--+.+.+++.++++|+.+.+++.|+.+.+.|+.+
T Consensus 119 p~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l 183 (350)
T PTZ00343 119 PQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVAL 183 (350)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHh
Confidence 34566666666777888899988888888888899999999999999999999999999999975
No 33
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.67 E-value=0.0065 Score=44.71 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
+.+.+...+|-..|......+|.|++|..++|-.-+-..++++.+++++.+||.-.++.+.|+..=+
T Consensus 97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 5677888999999999999999999999999999999999999999999999999999999998654
No 34
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.64 E-value=0.0062 Score=38.60 Aligned_cols=45 Identities=22% Similarity=0.345 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158 25 VTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 25 lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
+.|++-.-+-.+.+...|+++|+|++|+.+++|+.+.+.|+..=+
T Consensus 58 iAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 58 VAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIK 102 (120)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence 456665556788899999999999999999999999999987644
No 35
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.56 E-value=0.0097 Score=37.20 Aligned_cols=47 Identities=28% Similarity=0.327 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 24 AVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 24 ~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
.+.|++-.=+-.+.+...|+++|+|++++.+++|+.+.++|+..-+.
T Consensus 57 gvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 57 GVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 35677888888899999999999999999999999999999987554
No 36
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=96.52 E-value=0.0042 Score=42.92 Aligned_cols=60 Identities=8% Similarity=0.154 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 8 AFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 8 af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
+..-...-+..+++.++-+-+....+--+.....|++++||++|+.+++|..+.+.|+.+
T Consensus 221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 333444555667777776666666666789999999999999999999999999999864
No 37
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.40 E-value=0.014 Score=42.60 Aligned_cols=63 Identities=16% Similarity=0.328 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 5 GALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 5 ~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
|++=+.-|.......++||..+.+.....--+.+..+|+++++++.++.+++|+.+++.|+.+
T Consensus 86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~l 148 (334)
T PF06027_consen 86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVL 148 (334)
T ss_pred HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Confidence 556667888999999999999999999999999999999999999999999999999999874
No 38
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=96.23 E-value=0.04 Score=38.40 Aligned_cols=53 Identities=17% Similarity=0.201 Sum_probs=47.9
Q ss_pred HHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158 16 FVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF 68 (72)
Q Consensus 16 f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y 68 (72)
+..+++.+|-+.+....+--+.....|++++||++++.+++|..+.+.|+..=
T Consensus 233 ~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 233 GTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN 285 (299)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 34568889999999999999999999999999999999999999999998763
No 39
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.22 E-value=0.0043 Score=45.25 Aligned_cols=64 Identities=13% Similarity=0.142 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 7 LAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 7 ~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
.+-.-....|.-|++-.|+|+...-..+..+.+.+|.+.|+.+++..|+.|+.+.+.|..+=.+
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL 313 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence 3334445678899999999999999999999999999999999999999999999999876444
No 40
>PRK11689 aromatic amino acid exporter; Provisional
Probab=96.15 E-value=0.04 Score=38.40 Aligned_cols=47 Identities=28% Similarity=0.411 Sum_probs=40.1
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 21 VTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 21 ~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
.+++..-++....--+.+..+++++++|++++++++|+.+++.|+.+
T Consensus 88 ~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~l 134 (295)
T PRK11689 88 RRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAW 134 (295)
T ss_pred cccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhh
Confidence 45556667777777888899999999999999999999999999865
No 41
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=96.14 E-value=0.045 Score=36.45 Aligned_cols=65 Identities=20% Similarity=0.191 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhH-hhcCCcccchhhHHHHHHHHHHhhhh
Q 035158 5 GALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAV-FYFHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 5 ~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~-~~f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
++.....+..-+..++++++-+..+....--+.+...+. ++++|+++.+++.|..+.+.|+.+-.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~ 142 (292)
T COG0697 77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLIL 142 (292)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhee
Confidence 344445556666668889999999999999999999996 66699999999999999999987643
No 42
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.09 E-value=0.039 Score=38.65 Aligned_cols=67 Identities=15% Similarity=0.179 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 4 s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
.+++-+.-+..+....+..|.=|+.+.--.|-+.+.+.+.++++++.+..++++..+..+|++....
T Consensus 70 ~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~ 136 (303)
T PF08449_consen 70 LSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTL 136 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeee
Confidence 4566677778888999999999999999999999999999999999999999999999999987654
No 43
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=96.04 E-value=0.049 Score=38.21 Aligned_cols=69 Identities=10% Similarity=0.031 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhh----HHHHHHHHHHhhhhhcC
Q 035158 4 GGALAFFMVSTEFVLVS-VTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKG----FGLFTILVGVSLFNWYK 72 (72)
Q Consensus 4 s~~~af~~n~~~f~~i~-~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~----~G~~i~~~G~~~Y~~~k 72 (72)
.|++...-+..-+.-.+ +..+-+.++.....-+.-...++++++|+.+++|. +|..+.+.|+.+=...|
T Consensus 217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~~ 290 (290)
T TIGR00776 217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIGK 290 (290)
T ss_pred HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhccC
Confidence 56665444555556667 89999999999999999999999999999999999 99999999998765544
No 44
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=96.03 E-value=0.082 Score=33.60 Aligned_cols=34 Identities=32% Similarity=0.558 Sum_probs=27.5
Q ss_pred HHHhhhH--hhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 37 VNILVAV--FYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 37 ~~i~~s~--~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
.....++ .+|+|++|+.+++|..+.++|+.+-+.
T Consensus 87 ~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 87 LVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 3444444 489999999999999999999987654
No 45
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=95.66 E-value=0.11 Score=34.48 Aligned_cols=60 Identities=13% Similarity=0.193 Sum_probs=51.6
Q ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 11 MVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 11 ~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
--...+...++.++-.-+......-+..+..++++++|+.+..+++|..+.+.|....+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~ 287 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence 344456678888888888888888888888999999999999999999999999988764
No 46
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=95.63 E-value=0.012 Score=43.09 Aligned_cols=61 Identities=18% Similarity=0.282 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 10 FMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 10 ~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
+.|++...+.++-|+-|.++.-.+++.++=..+...+-|.+...|+.|..+-+.|++.|+-
T Consensus 274 ffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 274 FFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred eeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588889999999999999999999999999999999999999999999999999999974
No 47
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=95.56 E-value=0.12 Score=35.93 Aligned_cols=54 Identities=15% Similarity=0.204 Sum_probs=41.1
Q ss_pred HHHHHHhcc-chhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 14 TEFVLVSVT-SAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 14 ~~f~~i~~t-S~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
..|...+++ ++=.-++.-..--+.+..+++++++|+++.++++|..++++|+.+
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l 129 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLV 129 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHH
Confidence 445555554 333344455566788899999999999999999999999999875
No 48
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=95.49 E-value=0.037 Score=40.37 Aligned_cols=56 Identities=18% Similarity=0.504 Sum_probs=50.9
Q ss_pred HHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhc
Q 035158 16 FVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWY 71 (72)
Q Consensus 16 f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~ 71 (72)
-.++..+||..+++.=-.-+.-.++.++++|++++++.-++|.++.+.|...|+..
T Consensus 251 p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 251 PIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 35788999999999888889999999999999999999999999999999999753
No 49
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=94.84 E-value=0.29 Score=33.96 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=42.0
Q ss_pred HHHHHHHH-hccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158 12 VSTEFVLV-SVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF 68 (72)
Q Consensus 12 n~~~f~~i-~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y 68 (72)
+...+... +.+|+-.-++.-..--+.+..++.+ ++|+++.++++|+.++++|+.+-
T Consensus 83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll 139 (292)
T PRK11272 83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLL 139 (292)
T ss_pred HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHH
Confidence 33444444 5566555666666677788888875 79999999999999999998764
No 50
>COG2510 Predicted membrane protein [Function unknown]
Probab=94.62 E-value=0.028 Score=36.71 Aligned_cols=34 Identities=15% Similarity=0.465 Sum_probs=30.4
Q ss_pred HHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158 35 EAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF 68 (72)
Q Consensus 35 ~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y 68 (72)
-++.+..|++++||++|..+++|+.+..+|..+-
T Consensus 104 vvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv 137 (140)
T COG2510 104 VVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence 3578899999999999999999999999998653
No 51
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.59 E-value=0.061 Score=32.11 Aligned_cols=53 Identities=17% Similarity=0.137 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhccch--hHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHH
Q 035158 8 AFFMVSTEFVLVSVTSA--VTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60 (72)
Q Consensus 8 af~~n~~~f~~i~~tS~--lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i 60 (72)
.+..++.-+...-|.=| +.|.+-.-.-.+.+...|+.+|+|++|+.+++|+.+
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 44444443333333333 345565556778999999999999999999999875
No 52
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.38 E-value=0.069 Score=40.14 Aligned_cols=66 Identities=20% Similarity=0.249 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhh
Q 035158 4 GGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 4 s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
=|.+=|+-|+..-..++.||.-..++..-.-...++.+|.++-+|++|..+.++..+++.|+++-+
T Consensus 165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt 230 (416)
T KOG2765|consen 165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVT 230 (416)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEE
Confidence 367778999999999999999999999999999999999999999999999999999999987643
No 53
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=93.29 E-value=0.35 Score=33.92 Aligned_cols=61 Identities=18% Similarity=0.171 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhccchhHH-HHHHHHHHHHHHhhhHhhcCCcccchh----hHHHHHHHHHHhhhhh
Q 035158 10 FMVSTEFVLVSVTSAVTV-QIAAVVKEAVNILVAVFYFHDEFTWLK----GFGLFTILVGVSLFNW 70 (72)
Q Consensus 10 ~~n~~~f~~i~~tS~lT~-sV~g~~K~v~~i~~s~~~f~~~~t~~~----~~G~~i~~~G~~~Y~~ 70 (72)
.-|++-|..+++++.=+- .+....--+...+.|.++|+|+.+.++ ++|..+++.|..+...
T Consensus 71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~ 136 (290)
T TIGR00776 71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSR 136 (290)
T ss_pred hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEe
Confidence 345666666665443222 122334445677899999999999999 9999999999887543
No 54
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=91.31 E-value=0.073 Score=38.83 Aligned_cols=65 Identities=20% Similarity=0.299 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
+-|+++|.--+-.|+...+.|----.+.=-..-++++..++.+.+||.|..+.+|..+++.|+.+
T Consensus 102 LRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVL 166 (346)
T KOG4510|consen 102 LRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVL 166 (346)
T ss_pred eehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEE
Confidence 34556655555555554433321111222235678999999999999999999999999999865
No 55
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=90.26 E-value=1.9 Score=31.73 Aligned_cols=64 Identities=17% Similarity=0.298 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158 5 GALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF 68 (72)
Q Consensus 5 ~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y 68 (72)
++.+|+-..+...+|+...+++-.-.-+.+..+++++|.++|..|+|.+-.-|-.+.+.|+.+=
T Consensus 267 s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln 330 (367)
T KOG1582|consen 267 SLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLN 330 (367)
T ss_pred HHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhh
Confidence 4455666666777888899999999999999999999999999999999999999999998763
No 56
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=86.61 E-value=6.3 Score=25.09 Aligned_cols=66 Identities=29% Similarity=0.459 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhh-hHh-hc---CCcccchhhHHHHHHHHHHhh
Q 035158 2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILV-AVF-YF---HDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~-s~~-~f---~~~~t~~~~~G~~i~~~G~~~ 67 (72)
.+.|.++-..-.++...+.+..+-+..+.-..-+++.-.+ -.+ .| ++|+++.+++|..+.++|+.+
T Consensus 68 ~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 68 YLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred hccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 4578888888888888888888877776666555443221 111 12 258999999999999999863
No 57
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=84.39 E-value=0.91 Score=28.55 Aligned_cols=61 Identities=21% Similarity=0.349 Sum_probs=42.7
Q ss_pred HHHHHHHHH----HHHHhccc-hhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 7 LAFFMVSTE----FVLVSVTS-AVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 7 ~af~~n~~~----f~~i~~tS-~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
..|++|.+. |+.++++- +++.-+++-+--+.+.+.++++.+|..++..++|+.+.+.|+.+
T Consensus 46 ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 46 IPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 456666654 22233221 23334556777889999999988888899999999999999753
No 58
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=83.92 E-value=1.3 Score=32.19 Aligned_cols=46 Identities=13% Similarity=0.285 Sum_probs=36.9
Q ss_pred chhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhh
Q 035158 23 SAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLF 68 (72)
Q Consensus 23 S~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y 68 (72)
..+.-|..=-+.-.+.+.+|.++++|++++.|++-+.++.+|+..=
T Consensus 97 ~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~ 142 (293)
T COG2962 97 HVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ 142 (293)
T ss_pred chhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 4444444445566778899999999999999999999999998753
No 59
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=83.06 E-value=2.9 Score=29.89 Aligned_cols=55 Identities=22% Similarity=0.297 Sum_probs=41.4
Q ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 13 STEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 13 ~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
..++...+...+--.+=.|-+--+....++..+.+|+++..++.|..+++.|...
T Consensus 65 ~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~l 119 (300)
T PF05653_consen 65 ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVL 119 (300)
T ss_pred HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhee
Confidence 3444444444444445556777778889999999999999999999999999864
No 60
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=80.13 E-value=7.3 Score=28.34 Aligned_cols=50 Identities=18% Similarity=0.230 Sum_probs=40.5
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 21 VTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 21 ~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
+.+==|..+...+.-.++..+++++|+||++.-+....+..-.|.+.|+.
T Consensus 234 ~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~ 283 (293)
T COG2962 234 RLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI 283 (293)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33333445555667788999999999999999999999999999988864
No 61
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=78.18 E-value=9.6 Score=27.68 Aligned_cols=53 Identities=11% Similarity=0.234 Sum_probs=47.3
Q ss_pred HHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHh
Q 035158 14 TEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVS 66 (72)
Q Consensus 14 ~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~ 66 (72)
.|.....+.++=++++.=-+.-.+--..|+++.+|..|+.|++|+...+.++.
T Consensus 226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 36677888888899999999999999999999999999999999999888765
No 62
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=71.79 E-value=4.3 Score=28.78 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=47.2
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 12 VSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 12 n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
|+--....++.||---+-.-.-....+-.++++..+|++...+++...+++.|+.+-+|
T Consensus 67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 44445667777776666666667788889999999999999999999999999887654
No 63
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=64.34 E-value=34 Score=25.51 Aligned_cols=55 Identities=11% Similarity=0.275 Sum_probs=45.0
Q ss_pred HHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhc
Q 035158 17 VLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWY 71 (72)
Q Consensus 17 ~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~ 71 (72)
+++++..-+...-+-.+-.+++.+.|+.+|+-++|..=.+|..+.+.-+.+|+..
T Consensus 269 ~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~ 323 (345)
T KOG2234|consen 269 LVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLY 323 (345)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcC
Confidence 4556666666666666777888899999998899999999999999999999854
No 64
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=64.13 E-value=25 Score=26.16 Aligned_cols=57 Identities=18% Similarity=0.194 Sum_probs=42.9
Q ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 11 MVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 11 ~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
-....|.-+..||+=.++..-=.--+.+=+.|..+.+..+++.+|+|+.-...|..-
T Consensus 99 gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlvi 155 (372)
T KOG3912|consen 99 GSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVI 155 (372)
T ss_pred hhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhe
Confidence 334445556678888888765555566667788888999999999999999999753
No 65
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=63.38 E-value=9.8 Score=26.32 Aligned_cols=46 Identities=11% Similarity=0.059 Sum_probs=40.1
Q ss_pred HHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHH
Q 035158 15 EFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFT 60 (72)
Q Consensus 15 ~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i 60 (72)
.=.++++.+.+.-..+..+--+++...++.+|+.++|..-.+|..+
T Consensus 198 va~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 198 VAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 3457889999999999999999999999999999999988888653
No 66
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=54.24 E-value=1.6 Score=31.94 Aligned_cols=48 Identities=17% Similarity=0.335 Sum_probs=41.9
Q ss_pred hccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 20 SVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 20 ~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
++||-.+-+..-.--..++..++|++.+.+-.+.++.|..+|+.|+.+
T Consensus 100 QyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvvm 147 (336)
T KOG2766|consen 100 QYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVM 147 (336)
T ss_pred hhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEE
Confidence 567777777777888899999999999999999999999999999764
No 67
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=50.67 E-value=16 Score=21.20 Aligned_cols=17 Identities=18% Similarity=0.419 Sum_probs=14.8
Q ss_pred hHHHHHHHHHHhhhhhc
Q 035158 55 GFGLFTILVGVSLFNWY 71 (72)
Q Consensus 55 ~~G~~i~~~G~~~Y~~~ 71 (72)
.++++++++|...|..+
T Consensus 7 Li~ICVaii~lIlY~iY 23 (68)
T PF05961_consen 7 LIIICVAIIGLILYGIY 23 (68)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57899999999999865
No 68
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=44.98 E-value=24 Score=21.08 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=18.8
Q ss_pred cccchhhHHHHHHHHHHhhhh
Q 035158 49 EFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 49 ~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
..++.+++|+.+.+.|..+|.
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~ 24 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYF 24 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999995
No 69
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=42.89 E-value=1.2e+02 Score=21.64 Aligned_cols=64 Identities=14% Similarity=0.110 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhh----HHHHHHHHHHh
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKG----FGLFTILVGVS 66 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~----~G~~i~~~G~~ 66 (72)
++|++-=.-|++.+...++...-+-=..+++--++-.+.|.++++|+=|.++. +|..+.+.|..
T Consensus 200 l~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 200 LTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 45555556677777777777766666777788888899999999998776654 57777766654
No 70
>COG0342 SecD Preprotein translocase subunit SecD [Intracellular trafficking and secretion]
Probab=42.06 E-value=1.4e+02 Score=23.24 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHH
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILV 63 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~ 63 (72)
.+|+.++++-..-..+-++.--+--++ ...=+.+.++...-.++-.+|+-.+.|+.+++.
T Consensus 347 ~Agl~g~~~V~vfm~~~Yr~~Gvia~i-al~~n~~lil~vls~lgatLtLpgIAGiILtIG 406 (506)
T COG0342 347 IAGLIGLALVAVFMLLYYRLAGVIAAI-ALGLNGVLILAVLSLLGATLTLPGIAGIILTIG 406 (506)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHHHHHHHHhcccccchhhhHHHHhhh
Confidence 466777766555555545533333333 333366677777777788999999999998874
No 71
>PHA03049 IMV membrane protein; Provisional
Probab=41.20 E-value=29 Score=20.10 Aligned_cols=17 Identities=12% Similarity=0.434 Sum_probs=14.5
Q ss_pred hHHHHHHHHHHhhhhhc
Q 035158 55 GFGLFTILVGVSLFNWY 71 (72)
Q Consensus 55 ~~G~~i~~~G~~~Y~~~ 71 (72)
.++++++++|...|..+
T Consensus 7 l~iICVaIi~lIvYgiY 23 (68)
T PHA03049 7 LVIICVVIIGLIVYGIY 23 (68)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57899999999999765
No 72
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=39.44 E-value=20 Score=25.33 Aligned_cols=23 Identities=30% Similarity=0.590 Sum_probs=20.6
Q ss_pred ccchhhHHHHHHHHHHhhhhhcC
Q 035158 50 FTWLKGFGLFTILVGVSLFNWYK 72 (72)
Q Consensus 50 ~t~~~~~G~~i~~~G~~~Y~~~k 72 (72)
-+..|++|.++.++|...|...|
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeec
Confidence 46899999999999999998766
No 73
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=33.09 E-value=1.9e+02 Score=20.87 Aligned_cols=63 Identities=17% Similarity=0.164 Sum_probs=39.3
Q ss_pred hhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhhHh------hcCC----cccchhhHHHHHHHHHHhh
Q 035158 2 LSGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVF------YFHD----EFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 2 l~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~------~f~~----~~t~~~~~G~~i~~~G~~~ 67 (72)
+.+-++||+.|...|++.. -+|.+.+|.--.+.=..++.+ -|.| ....+.|++..+++.|.++
T Consensus 164 ~~af~vAflFnwIGFllty---cl~tT~agRYGA~~GfGLsLikwilIv~~sd~f~~y~n~q~wLwwi~~vlG~ll 236 (262)
T KOG4812|consen 164 MWAFIVAFLFNWIGFLLTY---CLTTTHAGRYGAISGFGLSLIKWILIVRFSDDFESYFNGQYWLWWIFLVLGLLL 236 (262)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHhhHhhhhhhhhccchhhheeeEEeecccccccccccchHHHHHHHHHHHHH
Confidence 4577899999999999866 466777775444433333322 1333 3444567777777777654
No 74
>KOG4782 consensus Predicted membrane protein [Function unknown]
Probab=31.84 E-value=25 Score=21.83 Aligned_cols=24 Identities=8% Similarity=0.311 Sum_probs=14.9
Q ss_pred cCCcccchhhHHHHHHHHHHhhhh
Q 035158 46 FHDEFTWLKGFGLFTILVGVSLFN 69 (72)
Q Consensus 46 f~~~~t~~~~~G~~i~~~G~~~Y~ 69 (72)
+.|++|...+.|+.+++-|-.+||
T Consensus 57 ykN~is~a~i~alViaIY~YTfYS 80 (108)
T KOG4782|consen 57 YKNHISFAGIGALVIAIYGYTFYS 80 (108)
T ss_pred hhhhhhhHHHHHHHHHhhhheeee
Confidence 346788666666666655555554
No 75
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=31.55 E-value=93 Score=23.10 Aligned_cols=60 Identities=18% Similarity=0.265 Sum_probs=52.6
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhhc
Q 035158 12 VSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNWY 71 (72)
Q Consensus 12 n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~~ 71 (72)
..+.|-.+++.|=-|..++---|-+-+.+.+.++.+.+.+..+.+=.++.-.|+..+...
T Consensus 97 ~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~ 156 (327)
T KOG1581|consen 97 SWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLF 156 (327)
T ss_pred hHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEe
Confidence 456788899999999999999999999999999999999999999888888887766543
No 76
>COG3296 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.32 E-value=1.3e+02 Score=19.75 Aligned_cols=32 Identities=28% Similarity=0.507 Sum_probs=27.0
Q ss_pred HHHHHhhhHhhcCCcccchhhHHHHHHHHHHh
Q 035158 35 EAVNILVAVFYFHDEFTWLKGFGLFTILVGVS 66 (72)
Q Consensus 35 ~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~ 66 (72)
..+.+..|+++-+...+..+.+|..+++.|+.
T Consensus 76 s~vLil~g~~la~t~~~~i~~ig~~l~li~il 107 (143)
T COG3296 76 SFVLILAGVFLAATDISFIIIIGFFLTLIGIL 107 (143)
T ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Confidence 45567788888888999999999999988887
No 77
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=30.33 E-value=54 Score=20.61 Aligned_cols=34 Identities=24% Similarity=0.560 Sum_probs=24.6
Q ss_pred HHHHHHH----HhhhHhhcCCcccchhhHHHHHHHHHH
Q 035158 32 VVKEAVN----ILVAVFYFHDEFTWLKGFGLFTILVGV 65 (72)
Q Consensus 32 ~~K~v~~----i~~s~~~f~~~~t~~~~~G~~i~~~G~ 65 (72)
++.|+++ ...|+++.+|++++....|....+.++
T Consensus 66 i~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av 103 (108)
T PF04342_consen 66 IIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAV 103 (108)
T ss_pred HHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhh
Confidence 3445544 356888999999999999887665553
No 78
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=26.10 E-value=67 Score=18.02 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHhhhhh
Q 035158 54 KGFGLFTILVGVSLFNW 70 (72)
Q Consensus 54 ~~~G~~i~~~G~~~Y~~ 70 (72)
-++|-.+.++|.++|..
T Consensus 9 ~~~ggfVg~iG~a~Ypi 25 (58)
T PF15061_consen 9 LFVGGFVGLIGAALYPI 25 (58)
T ss_pred hhHHHHHHHHHHHHhhh
Confidence 36788999999999964
No 79
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.65 E-value=12 Score=27.75 Aligned_cols=37 Identities=16% Similarity=0.395 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHh
Q 035158 30 AAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVS 66 (72)
Q Consensus 30 ~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~ 66 (72)
.|.+--+.-..++..+.+|+++....+|+.++++|..
T Consensus 96 LGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst 132 (335)
T KOG2922|consen 96 LGALSVIISAILASFFLKEKLNLLGILGCVLCVVGST 132 (335)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccE
Confidence 3455556667888899999999999999999999974
No 80
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=25.16 E-value=2.3e+02 Score=19.45 Aligned_cols=27 Identities=7% Similarity=-0.145 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHHH
Q 035158 5 GALAFFMVSTEFVLVSVTSAVTVQIAA 31 (72)
Q Consensus 5 ~~~af~~n~~~f~~i~~tS~lT~sV~g 31 (72)
|++....+...|..++++++-.-++..
T Consensus 78 g~~~~~~~~~~~~al~~~~~~~a~~l~ 104 (293)
T PRK10532 78 GVSLGGMNYLFYLSIQTVPLGIAVALE 104 (293)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 333445556666666666544443433
No 81
>PRK02237 hypothetical protein; Provisional
Probab=22.39 E-value=2.1e+02 Score=17.95 Aligned_cols=42 Identities=17% Similarity=-0.040 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 26 TVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 26 T~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
.+..-|=+=-+.-+.=++.+.+.+.+...++|-.++++|...
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~i 102 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAV 102 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHH
Confidence 344445454555556677778889999999999999999854
No 82
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=22.09 E-value=1.7e+02 Score=22.48 Aligned_cols=59 Identities=19% Similarity=0.135 Sum_probs=46.4
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhhhhh
Q 035158 12 VSTEFVLVSVTSAVTVQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 12 n~~~f~~i~~tS~lT~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
-+.--...-.|||++-.+.=.+---+-++.-+++=+.+.|+..++|-.-.++|.+.-++
T Consensus 332 DylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 332 DYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNI 390 (416)
T ss_pred HHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheec
Confidence 33334456679999888877777777777778877889999999999999999876554
No 83
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.76 E-value=2.5e+02 Score=18.46 Aligned_cols=68 Identities=19% Similarity=0.268 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHh----hhHhhcC-CcccchhhHHHHHHHHHHhhhhh
Q 035158 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVVKEAVNIL----VAVFYFH-DEFTWLKGFGLFTILVGVSLFNW 70 (72)
Q Consensus 3 ~s~~~af~~n~~~f~~i~~tS~lT~sV~g~~K~v~~i~----~s~~~f~-~~~t~~~~~G~~i~~~G~~~Y~~ 70 (72)
+.|+++-.+-.++-....+..+.+....-..-+.+.-. .|++=.. .+++..+++|+++.++|+..-+.
T Consensus 74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 44566666666666777777766666555544433221 1222222 37899999999999999665543
No 84
>PF14576 SEO_N: Sieve element occlusion N-terminus
Probab=21.42 E-value=85 Score=22.79 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhccc---hhHHHHHHHHHHH
Q 035158 5 GALAFFMVSTEFVLVSVTS---AVTVQIAAVVKEA 36 (72)
Q Consensus 5 ~~~af~~n~~~f~~i~~tS---~lT~sV~g~~K~v 36 (72)
.+.||.+|+-+|+.+.+.. ||.-|++ .+|++
T Consensus 117 tLAAFAl~YGeFwlLaq~~~~n~LakSlA-~Lkql 150 (286)
T PF14576_consen 117 TLAAFALEYGEFWLLAQIYPTNPLAKSLA-ILKQL 150 (286)
T ss_pred HHHHHHHHhhhHHHHhhhcccCHHHHHHH-HHhcc
Confidence 4679999999999998863 4554443 44554
No 85
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=20.64 E-value=2.3e+02 Score=17.72 Aligned_cols=41 Identities=17% Similarity=0.003 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHhhhHhhcCCcccchhhHHHHHHHHHHhh
Q 035158 27 VQIAAVVKEAVNILVAVFYFHDEFTWLKGFGLFTILVGVSL 67 (72)
Q Consensus 27 ~sV~g~~K~v~~i~~s~~~f~~~~t~~~~~G~~i~~~G~~~ 67 (72)
++.-|=+=-+.-+.=++.+-+.+.+...++|-.+++.|...
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHh
Confidence 44444455555666677777888999999999999999864
No 86
>PF07479 NAD_Gly3P_dh_C: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; InterPro: IPR006109 NAD-dependent glycerol-3-phosphate dehydrogenase (1.1.1.8 from EC) (GPD) catalyzes the reversible reduction of dihydroxyacetone phosphate to glycerol-3-phosphate. It is a cytoplasmic protein, active as a homodimer [], each monomer containing an N-terminal NAD binding site []. In insects, it acts in conjunction with a mitochondrial alpha-glycerophosphate oxidase in the alpha-glycerophosphate cycle, which is essential for the production of energy used in insect flight [].; GO: 0016614 oxidoreductase activity, acting on CH-OH group of donors, 0005975 carbohydrate metabolic process, 0055114 oxidation-reduction process; PDB: 2PLA_A 3K96_A 1N1G_A 1M67_A 1JDJ_A 1N1E_B 1EVZ_A 1EVY_A 1M66_A 1TXG_B ....
Probab=20.08 E-value=1.4e+02 Score=19.12 Aligned_cols=21 Identities=19% Similarity=0.262 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHHHhhhHhh
Q 035158 25 VTVQIAAVVKEAVNILVAVFY 45 (72)
Q Consensus 25 lT~sV~g~~K~v~~i~~s~~~ 45 (72)
+...++|.+|++.-+..|+.-
T Consensus 4 ~GvEl~galKNi~Aia~Gi~~ 24 (149)
T PF07479_consen 4 VGVELCGALKNIYAIAAGIAD 24 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999998873
Done!