BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>035162
MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD
MRARIRGNKGY
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT1G10865 AT1G10865 AT1G10865	protein from Arabidopsis thaliana	3.3e-31
BLAST match view associations BLAST with Y18D10A.16 Y18D10A.16 Y18D10A.16	gene from Caenorhabditis elegans	9.4e-11
BLAST match view associations BLAST with COA5 COA5 COA5 Uncharacterized protein	protein from Sus scrofa	1.8e-09
BLAST match view associations BLAST with COA5 COA5 COA5 Cytochrome c oxidase assembly factor 5	protein from Bos taurus	2.9e-09
BLAST match view associations BLAST with COA5 COA5 COA5 Cytochrome c oxidase assembly factor 5	protein from Homo sapiens	2.9e-09
BLAST match view associations BLAST with Coa5 Coa5 Coa5 cytochrome C oxidase assembly factor 5	protein from Mus musculus	2.6e-08
BLAST match view associations BLAST with Coa5 Coa5 Coa5 cytochrome C oxidase assembly factor 5	gene from Rattus norvegicus	2.6e-08
BLAST match view associations BLAST with PET191 PET191 PET191 Protein required for assembly of cytochrome c oxidase	gene from Saccharomyces cerevisiae	1.4e-07
BLAST match view associations BLAST with coa5 coa5 coa5 cytochrome C oxidase assembly factor 5	gene_product from Danio rerio	3.8e-07
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035162
        (71 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4010713430 - symbol:AT1G10865 "AT1G10865" spec...   343  3.3e-31   1
WB|WBGene00012483 - symbol:Y18D10A.16 species:6239 "Caeno...   150  9.4e-11   1
UNIPROTKB|E1C792 - symbol:COA5 "Uncharacterized protein" ...   148  1.5e-10   1
POMBASE|SPBC16A3.16 - symbol:SPBC16A3.16 "mitochondrial i...   147  2.0e-10   1
UNIPROTKB|F1STD9 - symbol:COA5 "Uncharacterized protein" ...   138  1.8e-09   1
UNIPROTKB|Q3ZCK8 - symbol:COA5 "Cytochrome c oxidase asse...   136  2.9e-09   1
UNIPROTKB|Q86WW8 - symbol:COA5 "Cytochrome c oxidase asse...   136  2.9e-09   1
MGI|MGI:1923428 - symbol:Coa5 "cytochrome C oxidase assem...   127  2.6e-08   1
RGD|1565095 - symbol:Coa5 "cytochrome C oxidase assembly ...   127  2.6e-08   1
SGD|S000003795 - symbol:PET191 "Protein required for asse...   120  1.4e-07   1
ZFIN|ZDB-GENE-060825-53 - symbol:coa5 "cytochrome C oxida...   116  3.8e-07   1


>TAIR|locus:4010713430 [details] [associations]
            symbol:AT1G10865 "AT1G10865" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR018793 Pfam:PF10203 HOGENOM:HOG000243245 OMA:PCIPSEC
            EMBL:AK118760 IPI:IPI00516995 RefSeq:NP_001077513.1
            UniGene:At.16752 UniGene:At.64974 PRIDE:Q8GWM1
            EnsemblPlants:AT1G10865.1 GeneID:5007681 KEGG:ath:AT1G10865
            TAIR:At1g10865 PhylomeDB:Q8GWM1 ProtClustDB:CLSN2697857
            Genevestigator:Q8GWM1 Uniprot:Q8GWM1
        Length = 71

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 64/71 (90%), Positives = 66/71 (92%)

Query:     1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
             M+KSCKGLA ELVKCLSES CVK EKRS R+C GEKSPCIPSECVGLRETYFNCKRGQVD
Sbjct:     1 MAKSCKGLAEELVKCLSESICVKGEKRSIRDCTGEKSPCIPSECVGLRETYFNCKRGQVD 60

Query:    61 MRARIRGNKGY 71
             MRARIRGNKGY
Sbjct:    61 MRARIRGNKGY 71


>WB|WBGene00012483 [details] [associations]
            symbol:Y18D10A.16 species:6239 "Caenorhabditis elegans"
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            GO:GO:0040010 EMBL:AL034393 eggNOG:NOG284465 InterPro:IPR018793
            Pfam:PF10203 HOGENOM:HOG000243245 PIR:T26525 RefSeq:NP_493253.1
            STRING:Q9XW18 PaxDb:Q9XW18 EnsemblMetazoa:Y18D10A.16 GeneID:173157
            KEGG:cel:CELE_Y18D10A.16 UCSC:Y18D10A.16 CTD:173157
            WormBase:Y18D10A.16 InParanoid:Q9XW18 OMA:PCIPSEC NextBio:878509
            Uniprot:Q9XW18
        Length = 96

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 28/68 (41%), Positives = 40/68 (58%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSP-CIPSECVGLRETYFNCKRGQVDMR 62
             SC  L   L KC+  S CV+V+ RS +EC   +    +P +C  + + + +CKR  VDMR
Sbjct:    27 SCDRLRQALKKCIKNSHCVQVQARSAKECIDARGDGSVPDKCFAVLQNFTDCKRSLVDMR 86

Query:    63 ARIRGNKG 70
             +R RG KG
Sbjct:    87 SRFRGRKG 94


>UNIPROTKB|E1C792 [details] [associations]
            symbol:COA5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
            CTD:493753 GeneTree:ENSGT00390000005548 OMA:MRYEGNE
            InterPro:IPR018793 Pfam:PF10203 EMBL:AADN02017688 IPI:IPI00684281
            RefSeq:XP_001232442.1 UniGene:Gga.12244 Ensembl:ENSGALT00000030248
            GeneID:769722 KEGG:gga:769722 NextBio:20919949 Uniprot:E1C792
        Length = 75

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 31/69 (44%), Positives = 41/69 (59%)

Query:     3 KSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMR 62
             ++C G+  +L +CL ES CV  E +S R+C  E        C GL+ T+F CKR  +D R
Sbjct:    13 QACSGVREDLRQCLLESPCVLQENKSPRQCLRE------GHCKGLQLTFFACKRSMLDTR 66

Query:    63 ARIRGNKGY 71
             AR RG KGY
Sbjct:    67 ARFRGRKGY 75


>POMBASE|SPBC16A3.16 [details] [associations]
            symbol:SPBC16A3.16 "mitochondrial inner membrane protein
            involved in cytochrome c oxidase assembly Pet191 (predicted)"
            species:4896 "Schizosaccharomyces pombe" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005829
            "cytosol" evidence=IDA] [GO:0007005 "mitochondrion organization"
            evidence=IC] [GO:0008535 "respiratory chain complex IV assembly"
            evidence=ISO] PomBase:SPBC16A3.16 GO:GO:0005829 GO:GO:0005739
            GO:GO:0005634 EMBL:CU329671 GO:GO:0007005 GO:GO:0008535
            eggNOG:NOG284465 InterPro:IPR018793 Pfam:PF10203 PIR:T39536
            RefSeq:NP_596773.1 STRING:O42921 EnsemblFungi:SPBC16A3.16.1
            GeneID:2539684 KEGG:spo:SPBC16A3.16 HOGENOM:HOG000243245
            OMA:KKSAREC OrthoDB:EOG441TN0 NextBio:20800838 Uniprot:O42921
        Length = 85

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 30/66 (45%), Positives = 38/66 (57%)

Query:     1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVD 60
             M +SCK +  +L  CL  SDC+ V+K+S REC   K   +P EC  L E Y  CKR  +D
Sbjct:     1 MGRSCKVIREDLANCLLHSDCMFVKKKSARECLKNKDE-LPEECKNLIEAYGECKRQMLD 59

Query:    61 MRARIR 66
             M  R R
Sbjct:    60 MTKRYR 65


>UNIPROTKB|F1STD9 [details] [associations]
            symbol:COA5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
            GeneTree:ENSGT00390000005548 OMA:MRYEGNE InterPro:IPR018793
            Pfam:PF10203 EMBL:CU694916 Ensembl:ENSSSCT00000026882
            Uniprot:F1STD9
        Length = 74

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/68 (42%), Positives = 40/68 (58%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
             +C G+  +L  CL +SDCV  E +S R+C  E S      C  L+ ++F CKR  +D R+
Sbjct:    13 ACAGVKEDLGACLLQSDCVLQEGKSPRQCLKEGS------CKALQYSFFECKRSMLDARS 66

Query:    64 RIRGNKGY 71
             R RG KGY
Sbjct:    67 RFRGRKGY 74


>UNIPROTKB|Q3ZCK8 [details] [associations]
            symbol:COA5 "Cytochrome c oxidase assembly factor 5"
            species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
            GO:GO:0005739 EMBL:BC102104 IPI:IPI00690682 RefSeq:NP_001181953.1
            UniGene:Bt.54038 Ensembl:ENSBTAT00000019802 GeneID:614794
            KEGG:bta:614794 CTD:493753 eggNOG:NOG284465
            GeneTree:ENSGT00390000005548 HOVERGEN:HBG107093 InParanoid:Q3ZCK8
            OMA:MRYEGNE OrthoDB:EOG49ZXQX NextBio:20899292 InterPro:IPR018793
            Pfam:PF10203 Uniprot:Q3ZCK8
        Length = 74

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 28/68 (41%), Positives = 39/68 (57%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
             +C G+  +L  CL +SDCV  E +S R+C  E        C  L+ ++F CKR  +D R+
Sbjct:    13 ACAGVKEDLGLCLLQSDCVLKEGKSPRQCLKE------GNCKALKYSFFECKRSMLDARS 66

Query:    64 RIRGNKGY 71
             R RG KGY
Sbjct:    67 RFRGRKGY 74


>UNIPROTKB|Q86WW8 [details] [associations]
            symbol:COA5 "Cytochrome c oxidase assembly factor 5"
            species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
            evidence=IEA] GO:GO:0005739 EMBL:CH471127 Orphanet:70474 CTD:493753
            eggNOG:NOG284465 HOVERGEN:HBG107093 OMA:MRYEGNE OrthoDB:EOG49ZXQX
            InterPro:IPR018793 Pfam:PF10203 EMBL:AC010134 EMBL:BC047722
            IPI:IPI00400948 RefSeq:NP_001008216.1 UniGene:Hs.596537
            ProteinModelPortal:Q86WW8 DMDM:74727729 PaxDb:Q86WW8
            PeptideAtlas:Q86WW8 PRIDE:Q86WW8 DNASU:493753
            Ensembl:ENST00000328709 GeneID:493753 KEGG:hsa:493753
            UCSC:uc002syz.3 GeneCards:GC02M099216 HGNC:HGNC:33848 MIM:220110
            MIM:613920 neXtProt:NX_Q86WW8 Orphanet:254905 PharmGKB:PA162379390
            InParanoid:Q86WW8 PhylomeDB:Q86WW8 GenomeRNAi:493753 NextBio:111737
            ArrayExpress:Q86WW8 Bgee:Q86WW8 CleanEx:HS_C2orf64
            Genevestigator:Q86WW8 Uniprot:Q86WW8
        Length = 74

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 30/68 (44%), Positives = 38/68 (55%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
             +C GL  +L  CL +SDCV  E +S R+C  E        C  L+  +F CKR  +D RA
Sbjct:    13 ACAGLKEDLGACLLQSDCVVQEGKSPRQCLKE------GYCNSLKYAFFECKRSVLDNRA 66

Query:    64 RIRGNKGY 71
             R RG KGY
Sbjct:    67 RFRGRKGY 74


>MGI|MGI:1923428 [details] [associations]
            symbol:Coa5 "cytochrome C oxidase assembly factor 5"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008150
            "biological_process" evidence=ND] MGI:MGI:1923428 GO:GO:0005739
            CTD:493753 eggNOG:NOG284465 GeneTree:ENSGT00390000005548
            HOVERGEN:HBG107093 OMA:MRYEGNE OrthoDB:EOG49ZXQX InterPro:IPR018793
            Pfam:PF10203 EMBL:AK166651 EMBL:AK169639 EMBL:BC002137
            IPI:IPI00117109 RefSeq:NP_932123.3 UniGene:Mm.28085 PaxDb:Q99M07
            PRIDE:Q99M07 Ensembl:ENSMUST00000027286 GeneID:76178 KEGG:mmu:76178
            UCSC:uc007aro.2 InParanoid:Q99M07 NextBio:344717 Bgee:Q99M07
            CleanEx:MM_6330578E17RIK Genevestigator:Q99M07 Uniprot:Q99M07
        Length = 74

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 27/68 (39%), Positives = 38/68 (55%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
             +C G+  +L  CL +S CV  E +S R+C  E        C  L+ ++F CKR  +D R+
Sbjct:    13 ACAGVKEDLGACLLQSACVLQEGKSPRQCLKE------GNCRALQYSFFECKRSMLDARS 66

Query:    64 RIRGNKGY 71
             R RG KGY
Sbjct:    67 RFRGRKGY 74


>RGD|1565095 [details] [associations]
            symbol:Coa5 "cytochrome C oxidase assembly factor 5"
            species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
            evidence=IEA;ISO] RGD:1565095 GO:GO:0005739 EMBL:CH473965
            CTD:493753 GeneTree:ENSGT00390000005548 OMA:MRYEGNE
            OrthoDB:EOG49ZXQX InterPro:IPR018793 Pfam:PF10203 IPI:IPI00190094
            RefSeq:NP_001182417.1 UniGene:Rn.3412 Ensembl:ENSRNOT00000024366
            GeneID:503252 KEGG:rno:503252 UCSC:RGD:1565095 NextBio:713626
            Uniprot:D3ZB55
        Length = 74

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 27/68 (39%), Positives = 38/68 (55%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRA 63
             +C G+  +L  CL +S CV  E +S R+C  E        C  L+ ++F CKR  +D R+
Sbjct:    13 ACAGVKEDLGACLLQSACVLQEGKSPRQCLKE------GNCRALQYSFFECKRSMLDARS 66

Query:    64 RIRGNKGY 71
             R RG KGY
Sbjct:    67 RFRGRKGY 74


>SGD|S000003795 [details] [associations]
            symbol:PET191 "Protein required for assembly of cytochrome c
            oxidase" species:4932 "Saccharomyces cerevisiae" [GO:0003674
            "molecular_function" evidence=ND] [GO:0033617 "mitochondrial
            respiratory chain complex IV assembly" evidence=IMP] [GO:0005758
            "mitochondrial intermembrane space" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IEA;IDA] [GO:0031305 "integral to
            mitochondrial inner membrane" evidence=IDA] SGD:S000003795
            EMBL:BK006943 GO:GO:0005758 GO:GO:0031305 GO:GO:0033617 EMBL:L36344
            InterPro:IPR018793 Pfam:PF10203 EMBL:X81635 OrthoDB:EOG441TN0
            EMBL:L06067 EMBL:X70013 EMBL:Z49534 EMBL:AY558310 PIR:S28924
            RefSeq:NP_012568.1 ProteinModelPortal:Q02772 DIP:DIP-1619N
            IntAct:Q02772 MINT:MINT-403632 STRING:Q02772 PaxDb:Q02772
            PeptideAtlas:Q02772 EnsemblFungi:YJR034W GeneID:853491
            KEGG:sce:YJR034W CYGD:YJR034w eggNOG:NOG328441 HOGENOM:HOG000173745
            OMA:ICLQRSP NextBio:974122 Genevestigator:Q02772 GermOnline:YJR034W
            Uniprot:Q02772
        Length = 108

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 25/70 (35%), Positives = 36/70 (51%)

Query:     1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAG--EKSPCIPSECVGLRETYFNCKRGQ 58
             M  SCK     +  CL  S CV +E+ + +EC    E +  +P  C+   + + +CKRG 
Sbjct:     1 MVASCKDQKKAVAICLQRSPCVMIERHNPQECLDNPELNKDLPELCIAQMKAFLDCKRGI 60

Query:    59 VDMRARIRGN 68
             VDM  R  GN
Sbjct:    61 VDMTKRFTGN 70


>ZFIN|ZDB-GENE-060825-53 [details] [associations]
            symbol:coa5 "cytochrome C oxidase assembly factor 5"
            species:7955 "Danio rerio" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND]
            ZFIN:ZDB-GENE-060825-53 eggNOG:NOG284465 HOVERGEN:HBG107093
            OrthoDB:EOG49ZXQX InterPro:IPR018793 Pfam:PF10203 EMBL:BC122274
            IPI:IPI00615852 UniGene:Dr.86019 InParanoid:Q0P451 Uniprot:Q0P451
        Length = 75

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 24/68 (35%), Positives = 34/68 (50%)

Query:     3 KSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQVDMR 62
             ++C GL  +   CL + DCV  E +   EC  E        C  ++  +F CKR  +D R
Sbjct:    13 RACSGLREDFKACLLQHDCVVKEGKKPSECLKE------GHCRSMQVAFFECKRSMLDTR 66

Query:    63 ARIRGNKG 70
             +R RG KG
Sbjct:    67 SRFRGRKG 74


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       71        71   0.00091  102 3  11 22  0.46    28
                                                     29  0.42    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  11
  No. of states in DFA:  496 (53 KB)
  Total size of DFA:  95 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.11u 0.24s 8.35t   Elapsed:  00:00:00
  Total cpu time:  8.11u 0.24s 8.35t   Elapsed:  00:00:00
  Start:  Fri May 10 06:05:40 2013   End:  Fri May 10 06:05:40 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
