Query 035162
Match_columns 71
No_of_seqs 106 out of 137
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 15:59:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035162.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035162hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oiga_ g.3.18.1 (A:) Dumpy {F 32.6 2.7 0.0002 19.4 -0.8 9 14-22 3-11 (26)
2 d2hp8a_ a.17.1.1 (A:) p8-MTCP1 23.1 24 0.0017 19.5 2.0 18 1-18 1-20 (68)
3 d2dara1 g.39.1.3 (A:53-84) PDZ 14.3 27 0.0019 16.7 0.7 10 53-62 4-13 (32)
4 d1kwia_ d.17.1.3 (A:) Cathelic 12.8 16 0.0012 20.0 -0.5 19 16-34 50-68 (98)
5 d1u97a_ a.17.1.2 (A:) Cytochro 11.6 30 0.0021 19.1 0.5 18 41-58 44-61 (69)
6 d1x41a1 a.4.1.1 (A:8-54) Trans 10.8 40 0.0029 16.3 0.8 9 25-33 32-40 (47)
7 d1sxma_ g.3.7.2 (A:) Noxiustox 10.5 21 0.0015 17.6 -0.4 9 27-35 8-16 (39)
8 d1xppa_ d.74.3.2 (A:) DNA-dire 9.5 19 0.0014 20.2 -1.0 28 25-52 62-89 (99)
9 d1h9ii_ g.3.2.1 (I:) Trypsin i 9.4 8.5 0.00062 18.1 -2.1 11 12-22 6-16 (30)
10 d1z3aa1 c.97.1.2 (A:13-168) tR 8.7 75 0.0055 18.4 1.7 19 40-58 136-154 (156)
No 1
>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=32.60 E-value=2.7 Score=19.44 Aligned_cols=9 Identities=44% Similarity=1.106 Sum_probs=6.9
Q ss_pred HHHhcCccc
Q 035162 14 KCLSESDCV 22 (71)
Q Consensus 14 ~Cl~~SdCv 22 (71)
+|+++|||-
T Consensus 3 ecvl~sdcp 11 (26)
T d1oiga_ 3 ECVLNSDCP 11 (26)
T ss_dssp SCCSSTTSS
T ss_pred ceeEcCCCC
Confidence 588888883
No 2
>d2hp8a_ a.17.1.1 (A:) p8-MTCP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.10 E-value=24 Score=19.45 Aligned_cols=18 Identities=39% Similarity=0.781 Sum_probs=12.4
Q ss_pred Cch--hHHHHHHHHHHHHhc
Q 035162 1 MSK--SCKGLAMELVKCLSE 18 (71)
Q Consensus 1 M~~--sC~~~r~~L~~Cl~~ 18 (71)
||+ +|+...=++-.||+.
T Consensus 1 mp~kdPCk~~AC~IQ~CLq~ 20 (68)
T d2hp8a_ 1 MPQKDPCQKQACEIQKCLQA 20 (68)
T ss_dssp CCSCCTTHHHHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHHHHH
Confidence 555 777777777777654
No 3
>d2dara1 g.39.1.3 (A:53-84) PDZ and LIM domain protein 5, Enigma {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.32 E-value=27 Score=16.66 Aligned_cols=10 Identities=20% Similarity=0.431 Sum_probs=8.1
Q ss_pred hcccCCCCCC
Q 035162 53 NCKRGQVDMR 62 (71)
Q Consensus 53 eCKR~~lD~r 62 (71)
.||++|.|+=
T Consensus 4 ~C~~sL~d~g 13 (32)
T d2dara1 4 HCKNTMAYIG 13 (32)
T ss_dssp SSCCBCSSSC
T ss_pred cccccHhhcc
Confidence 5899998873
No 4
>d1kwia_ d.17.1.3 (A:) Cathelicidin motif of protegrin-3 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=12.76 E-value=16 Score=20.02 Aligned_cols=19 Identities=16% Similarity=0.335 Sum_probs=15.5
Q ss_pred HhcCccccccCCChhHHhc
Q 035162 16 LSESDCVKVEKRSFRECAG 34 (71)
Q Consensus 16 l~~SdCv~~~~~t~~eCL~ 34 (71)
+.+|+|-+.+..++.+|--
T Consensus 50 i~eT~C~k~~~~~~~~C~~ 68 (98)
T d1kwia_ 50 VKETVCPRPTRQPPELCDF 68 (98)
T ss_dssp EEEEEEESSCCSCGGGSCB
T ss_pred EEEeecCCcCCCChHHCcc
Confidence 3578999988889999974
No 5
>d1u97a_ a.17.1.2 (A:) Cytochrome C oxidase copper chaperone, COX17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=11.59 E-value=30 Score=19.10 Aligned_cols=18 Identities=28% Similarity=0.689 Sum_probs=14.8
Q ss_pred hhhHHHHHHHHHhcccCC
Q 035162 41 PSECVGLRETYFNCKRGQ 58 (71)
Q Consensus 41 p~eC~~lr~~f~eCKR~~ 58 (71)
+++|..|-.+|-+|-|+.
T Consensus 44 ~~~C~~lIeahk~CMr~~ 61 (69)
T d1u97a_ 44 SEKCKEFIEKYKECMKGY 61 (69)
T ss_dssp STTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 457999999999997753
No 6
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.82 E-value=40 Score=16.26 Aligned_cols=9 Identities=22% Similarity=0.501 Sum_probs=6.1
Q ss_pred cCCChhHHh
Q 035162 25 EKRSFRECA 33 (71)
Q Consensus 25 ~~~t~~eCL 33 (71)
.+||+.+|.
T Consensus 32 ~~Rt~~Qcr 40 (47)
T d1x41a1 32 CTKTKEECE 40 (47)
T ss_dssp TTSCHHHHH
T ss_pred CCCCHHHHH
Confidence 357777775
No 7
>d1sxma_ g.3.7.2 (A:) Noxiustoxin {Mexican scorpion (Centruroides noxius) [TaxId: 6878]}
Probab=10.52 E-value=21 Score=17.62 Aligned_cols=9 Identities=22% Similarity=0.505 Sum_probs=7.3
Q ss_pred CChhHHhcC
Q 035162 27 RSFRECAGE 35 (71)
Q Consensus 27 ~t~~eCL~~ 35 (71)
-+|++||..
T Consensus 8 tspkqcl~p 16 (39)
T d1sxma_ 8 TSPKQCSKP 16 (39)
T ss_dssp SSTTSSTTT
T ss_pred CChHHHhhH
Confidence 589999974
No 8
>d1xppa_ d.74.3.2 (A:) DNA-directed RNA polymerase subunit L, RpoL {Thermoplasma acidophilum [TaxId: 2303]}
Probab=9.51 E-value=19 Score=20.20 Aligned_cols=28 Identities=4% Similarity=-0.047 Sum_probs=21.1
Q ss_pred cCCChhHHhcCCCCCChhhHHHHHHHHH
Q 035162 25 EKRSFRECAGEKSPCIPSECVGLRETYF 52 (71)
Q Consensus 25 ~~~t~~eCL~~~~~~lp~eC~~lr~~f~ 52 (71)
.+.+|.+.+++....+-.+|..+...|-
T Consensus 62 ~~~~p~~~l~~a~~~li~~~~~l~~~~~ 89 (99)
T d1xppa_ 62 KSGKPQSAIKRAVRKLSKLYEDLGTQFQ 89 (99)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4558999988766677788888887774
No 9
>d1h9ii_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=9.38 E-value=8.5 Score=18.13 Aligned_cols=11 Identities=45% Similarity=1.280 Sum_probs=7.1
Q ss_pred HHHHHhcCccc
Q 035162 12 LVKCLSESDCV 22 (71)
Q Consensus 12 L~~Cl~~SdCv 22 (71)
|+.|-|.|||.
T Consensus 6 lirckqdsdcl 16 (30)
T d1h9ii_ 6 LIRCKQDSDCL 16 (30)
T ss_dssp CCBCSSGGGSC
T ss_pred EEEeccCcccc
Confidence 34577778774
No 10
>d1z3aa1 c.97.1.2 (A:13-168) tRNA adenosine deaminase TadA {Escherichia coli [TaxId: 562]}
Probab=8.73 E-value=75 Score=18.43 Aligned_cols=19 Identities=26% Similarity=0.718 Sum_probs=15.3
Q ss_pred ChhhHHHHHHHHHhcccCC
Q 035162 40 IPSECVGLRETYFNCKRGQ 58 (71)
Q Consensus 40 lp~eC~~lr~~f~eCKR~~ 58 (71)
+-+||..|.+.||.=+|..
T Consensus 136 l~ee~~~ll~~Ff~~~r~~ 154 (156)
T d1z3aa1 136 LADECAALLSDFFRMRRQE 154 (156)
T ss_dssp THHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHhC
Confidence 5689999999999855543
Done!