BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035165
MSSRITLKTKGKSVKGAKDSEKSRADCLKEWSTWAMKKAKVITHYGFIPLVIIIGMNSDP
KPQLHQLLSPV

High Scoring Gene Products

Symbol, full name Information P value
AT5G41685 protein from Arabidopsis thaliana 4.9e-21

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035165
        (71 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006668 - symbol:AT5G41685 species:3702 "Ara...   247  4.9e-21   1
TAIR|locus:2024623 - symbol:TOM7-2 "translocase of outer ...   216  9.5e-18   1
ASPGD|ASPL0000005474 - symbol:AN10828 species:162425 "Eme...    92  0.00013   1


>TAIR|locus:505006668 [details] [associations]
            symbol:AT5G41685 species:3702 "Arabidopsis thaliana"
            [GO:0005741 "mitochondrial outer membrane" evidence=IEA]
            [GO:0006886 "intracellular protein transport" evidence=IEA]
            [GO:0008565 "protein transporter activity" evidence=ISS]
            [GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
            transporter activity" evidence=IEA] InterPro:IPR012621 Pfam:PF08038
            GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006886
            GO:GO:0005741 EMBL:AB005233 GO:GO:0015450 UniGene:At.75606
            EMBL:AF361593 EMBL:AY058224 IPI:IPI00540019 RefSeq:NP_568593.1
            UniGene:At.43280 UniGene:At.71024 UniGene:At.75660 STRING:Q9ASY8
            PaxDb:Q9ASY8 PRIDE:Q9ASY8 EnsemblPlants:AT5G41685.1 GeneID:834171
            KEGG:ath:AT5G41685 GeneFarm:2959 TAIR:At5g41685 eggNOG:NOG254195
            HOGENOM:HOG000238089 InParanoid:Q9ASY8 OMA:KEWSNWA PhylomeDB:Q9ASY8
            ProtClustDB:CLSN2682635 Genevestigator:Q9ASY8 GermOnline:AT5G41685
            Uniprot:Q9ASY8
        Length = 75

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 49/75 (65%), Positives = 58/75 (77%)

Query:     1 MSSRITLKT---KGKSVKGAKDSE-KSRADCLKEWSTWAMKKAKVITHYGFIPLVIIIGM 56
             M S I+LK    KGK  KGA  S+ KS+ D +KEW+ W++KKAKV+THYGFIPLVI +GM
Sbjct:     1 MESTISLKVNKGKGKGSKGASSSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGM 60

Query:    57 NSDPKPQLHQLLSPV 71
             NSDPKP L QLLSPV
Sbjct:    61 NSDPKPHLFQLLSPV 75


>TAIR|locus:2024623 [details] [associations]
            symbol:TOM7-2 "translocase of outer membrane 7 kDa
            subunit 2" species:3702 "Arabidopsis thaliana" [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0006886
            "intracellular protein transport" evidence=IEA] [GO:0015450
            "P-P-bond-hydrolysis-driven protein transmembrane transporter
            activity" evidence=IEA] InterPro:IPR012621 Pfam:PF08038
            GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006886
            GO:GO:0005741 EMBL:AC007764 GO:GO:0015450 HOGENOM:HOG000238089
            ProtClustDB:CLSN2682635 IPI:IPI00531094 RefSeq:NP_176604.1
            UniGene:At.66090 EnsemblPlants:AT1G64220.1 GeneID:842727
            KEGG:ath:AT1G64220 GeneFarm:2962 TAIR:At1g64220 eggNOG:NOG241315
            InParanoid:Q3ECI7 OMA:KVATHYG PhylomeDB:Q3ECI7
            Genevestigator:Q3ECI7 GermOnline:AT1G64220 Uniprot:Q3ECI7
        Length = 77

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 44/77 (57%), Positives = 55/77 (71%)

Query:     1 MSSRITLKTKGKSV--KGAKDSEKSRADC----LKEWSTWAMKKAKVITHYGFIPLVIII 54
             M+++ TLK KGK+   KG+  S  S A       K+W+ W+++KAKV THYGFIPL+III
Sbjct:     1 MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query:    55 GMNSDPKPQLHQLLSPV 71
             GMNSDPKP L  LLSPV
Sbjct:    61 GMNSDPKPHLFHLLSPV 77


>ASPGD|ASPL0000005474 [details] [associations]
            symbol:AN10828 species:162425 "Emericella nidulans"
            [GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
            transporter activity" evidence=IEA] [GO:0005742 "mitochondrial
            outer membrane translocase complex" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0015266 "protein channel
            activity" evidence=IEA] [GO:0045040 "protein import into
            mitochondrial outer membrane" evidence=IEA] [GO:0030150 "protein
            import into mitochondrial matrix" evidence=IEA] InterPro:IPR012621
            Pfam:PF08038 GO:GO:0006886 GO:GO:0005741 EMBL:BN001301
            GO:GO:0015450 HOGENOM:HOG000200536 OMA:HYGFIPF
            EnsemblFungi:CADANIAT00007270 Uniprot:C8V0I0
        Length = 53

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 17/44 (38%), Positives = 29/44 (65%)

Query:    29 KEWSTWAMKKAKVITHYGFIPLVIIIGMN-SDPKPQLHQLLSPV 71
             KE  +  +  ++V  HYG++PL++ +G   SDP+P L +L SP+
Sbjct:     9 KERISKVIDVSRVAVHYGYLPLILYLGYTYSDPRPSLFKLFSPL 52


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.387    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       71        71   0.00091  102 3  11 22  0.50    28
                                                     29  0.42    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  569 (61 KB)
  Total size of DFA:  110 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.97u 0.11s 9.08t   Elapsed:  00:00:00
  Total cpu time:  8.97u 0.11s 9.08t   Elapsed:  00:00:00
  Start:  Fri May 10 06:07:06 2013   End:  Fri May 10 06:07:06 2013

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