BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035166
(71 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZC22|HSBP1_BOVIN Heat shock factor-binding protein 1 OS=Bos taurus GN=HSBP1 PE=3
SV=1
Length = 76
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 1 MTAFVQNLLQQMQSRFQTMSESIIAKIDEMGSRIDELEQSINDLRSEMGIE 51
+T+ VQ LLQQMQ +FQTMS+ II +ID+M SRID+LE++I DL ++ G+E
Sbjct: 12 LTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVE 62
>sp|O75506|HSBP1_HUMAN Heat shock factor-binding protein 1 OS=Homo sapiens GN=HSBP1 PE=1
SV=1
Length = 76
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 1 MTAFVQNLLQQMQSRFQTMSESIIAKIDEMGSRIDELEQSINDLRSEMGIE 51
+T+ VQ LLQQMQ +FQTMS+ II +ID+M SRID+LE++I DL ++ G+E
Sbjct: 12 LTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVE 62
>sp|Q5RDI2|HSBP1_PONAB Heat shock factor-binding protein 1 OS=Pongo abelii GN=HSBP1 PE=3
SV=1
Length = 76
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 1 MTAFVQNLLQQMQSRFQTMSESIIAKIDEMGSRIDELEQSINDLRSEMGIE 51
+T+ VQ LLQQMQ +FQTMS+ II +ID+M SRID+LE++I DL ++ G+E
Sbjct: 12 LTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVE 62
>sp|Q8K3X8|HSBP1_RAT Heat shock factor-binding protein 1 OS=Rattus norvegicus GN=Hsbp1
PE=3 SV=1
Length = 76
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%)
Query: 1 MTAFVQNLLQQMQSRFQTMSESIIAKIDEMGSRIDELEQSINDLRSEMGIE 51
+T V+ LLQQMQ +FQ MS+ II +ID+M SRID+LE++I DL ++ G+E
Sbjct: 12 ITLVVETLLQQMQDKFQIMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVE 62
>sp|Q9CQZ1|HSBP1_MOUSE Heat shock factor-binding protein 1 OS=Mus musculus GN=Hsbp1 PE=2
SV=1
Length = 76
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%)
Query: 1 MTAFVQNLLQQMQSRFQTMSESIIAKIDEMGSRIDELEQSINDLRSEMGIE 51
+T V+ LLQQMQ +FQ MS+ II +ID+M SRID+LE++I DL ++ G+E
Sbjct: 12 ITLVVETLLQQMQDKFQIMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVE 62
>sp|D4A9E1|HSBPL_RAT Heat shock factor-binding protein 1-like protein 1 OS=Rattus
norvegicus GN=Hsbp1l1 PE=3 SV=1
Length = 72
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 39/48 (81%)
Query: 6 QNLLQQMQSRFQTMSESIIAKIDEMGSRIDELEQSINDLRSEMGIEGS 53
+NLLQ+++ FQ ++ ++ +++EMG+RI++L+++++DL ++ GIE S
Sbjct: 19 ENLLQEVEEHFQALTATLNLRMEEMGNRIEDLQRNVDDLMAQAGIENS 66
>sp|C9JCN9|HSBPL_HUMAN Heat shock factor-binding protein 1-like protein 1 OS=Homo
sapiens GN=HSBP1L1 PE=3 SV=2
Length = 74
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 36/48 (75%)
Query: 6 QNLLQQMQSRFQTMSESIIAKIDEMGSRIDELEQSINDLRSEMGIEGS 53
+NL Q++Q FQ ++ ++ +++EMG+RI++L++++ DL + GIE S
Sbjct: 19 ENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENS 66
>sp|B2RXB2|HSBPL_MOUSE Heat shock factor-binding protein 1-like protein 1 OS=Mus
musculus GN=Hsbp1l1 PE=3 SV=1
Length = 72
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 38/48 (79%)
Query: 6 QNLLQQMQSRFQTMSESIIAKIDEMGSRIDELEQSINDLRSEMGIEGS 53
+NLL +++ FQ ++ ++ +++EMGSRI++L+++++DL ++ GIE S
Sbjct: 19 ENLLLEVEEHFQALTTTLNLRMEEMGSRIEDLQRNVDDLMTQAGIENS 66
>sp|O14330|YB7F_SCHPO Uncharacterized protein C16E9.15 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC16E9.15 PE=3 SV=1
Length = 75
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 1 MTAFVQNLLQQMQSRFQTMSESIIAKIDEMGSRIDELEQSINDLRSEMGIEGSASP 56
+T LL+ + F+T+ + K++ M +R+D+LE+S +R M + S SP
Sbjct: 18 ITTLTDKLLEDISGDFETLQKQFSEKLETMSTRLDQLEES---MREAMNKKSSVSP 70
>sp|Q58304|FLAC_METJA Putative flagella-related protein C OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=flaC PE=4 SV=1
Length = 141
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 23/28 (82%)
Query: 20 SESIIAKIDEMGSRIDELEQSINDLRSE 47
+E ++AK++++ S++ +LE SIN+LR E
Sbjct: 4 TEGLLAKVNDIESKLPKLESSINNLRKE 31
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.123 0.317
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,103,017
Number of Sequences: 539616
Number of extensions: 710214
Number of successful extensions: 3813
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3771
Number of HSP's gapped (non-prelim): 58
length of query: 71
length of database: 191,569,459
effective HSP length: 43
effective length of query: 28
effective length of database: 168,365,971
effective search space: 4714247188
effective search space used: 4714247188
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)