BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035182
         (71 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9ASY8|TOM71_ARATH Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis
          thaliana GN=TOM7-1 PE=1 SV=1
          Length = 75

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 37/51 (72%), Positives = 45/51 (88%)

Query: 21 EKSRADCLKEWSTWAMKKAKVITHYGFIPLVIIIGMNSDPKPQLHQLLSPV 71
          +KS+ D +KEW+ W++KKAKV+THYGFIPLVI +GMNSDPKP L QLLSPV
Sbjct: 25 DKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLFQLLSPV 75


>sp|O82067|TOM7A_SOLTU Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum
          GN=TOM7-1 PE=3 SV=3
          Length = 72

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 39/47 (82%)

Query: 25 ADCLKEWSTWAMKKAKVITHYGFIPLVIIIGMNSDPKPQLHQLLSPV 71
             +KEW TW  KKAKVITHYGFIPLVIIIGMNS+PKP L QLLSPV
Sbjct: 26 GKFVKEWGTWTAKKAKVITHYGFIPLVIIIGMNSEPKPSLSQLLSPV 72


>sp|Q3ECI7|TOM72_ARATH Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis
          thaliana GN=TOM7-2 PE=2 SV=1
          Length = 77

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 6/77 (7%)

Query: 1  MSSRITLKTKGKSVKGAKDSEKSRA------DCLKEWSTWAMKKAKVITHYGFIPLVIII 54
          M+++ TLK KGK+      S  S +         K+W+ W+++KAKV THYGFIPL+III
Sbjct: 1  MAAKSTLKIKGKAKPSKGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIII 60

Query: 55 GMNSDPKPQLHQLLSPV 71
          GMNSDPKP L  LLSPV
Sbjct: 61 GMNSDPKPHLFHLLSPV 77


>sp|O42999|TOM7_SCHPO Mitochondrial import receptor subunit tom7 OS=Schizosaccharomyces
          pombe (strain 972 / ATCC 24843) GN=tom7 PE=3 SV=1
          Length = 49

 Score = 31.2 bits (69), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 20 SEKSRADCLKEWSTWAMKKAKVITHYGFIPLVIIIGMNSDPKPQLHQLLS 69
          SE+S+   +K          K +THYG+IPL++ +GM    +    +  +
Sbjct: 4  SEESKERLVK-----VFNIGKTVTHYGWIPLILWLGMAFQLRSTFSEFFT 48


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.130    0.387 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,065,119
Number of Sequences: 539616
Number of extensions: 855212
Number of successful extensions: 1786
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1780
Number of HSP's gapped (non-prelim): 5
length of query: 71
length of database: 191,569,459
effective HSP length: 43
effective length of query: 28
effective length of database: 168,365,971
effective search space: 4714247188
effective search space used: 4714247188
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)