Query 035182
Match_columns 71
No_of_seqs 101 out of 123
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 16:14:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035182.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035182hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2zjrs1 b.53.1.1 (S:1-175) Rib 36.1 3.2 0.00023 26.4 -0.3 10 45-55 16-25 (175)
2 d1dfup_ b.53.1.1 (P:) Ribosoma 28.6 3 0.00022 24.1 -1.3 8 46-53 24-31 (94)
3 d1qeza_ b.40.5.1 (A:) Inorgani 21.8 9.9 0.00072 24.1 0.2 9 42-50 48-56 (170)
4 d1i40a_ b.40.5.1 (A:) Inorgani 18.5 13 0.00094 23.6 0.2 10 42-51 52-61 (175)
5 d1twla_ b.40.5.1 (A:) Inorgani 18.1 13 0.00097 23.5 0.2 9 43-51 53-61 (173)
6 d2prda_ b.40.5.1 (A:) Inorgani 15.0 17 0.0012 23.1 0.1 9 43-51 53-61 (174)
7 d2cvza2 c.2.1.6 (A:2-157) Hydr 14.7 64 0.0046 18.4 2.8 23 19-46 133-155 (156)
8 d2f20a1 d.303.1.1 (A:2-232) Hy 13.9 22 0.0016 23.0 0.4 10 41-50 55-64 (231)
9 d1feua_ b.53.1.1 (A:) Ribosoma 12.8 11 0.00082 23.8 -1.3 10 46-56 22-31 (185)
10 d1s7ja_ d.21.1.2 (A:) Hypothet 12.3 76 0.0056 19.5 2.8 22 17-43 28-49 (260)
No 1
>d2zjrs1 b.53.1.1 (S:1-175) Ribosomal protein TL5 (general stress protein CTC) {Deinococcus radiodurans [TaxId: 1299]}
Probab=36.06 E-value=3.2 Score=26.43 Aligned_cols=10 Identities=20% Similarity=0.159 Sum_probs=9.0
Q ss_pred eehhhhhhhhc
Q 035182 45 YGFIPLVIIIG 55 (71)
Q Consensus 45 yGfIPlVIylG 55 (71)
=|+||.||| |
T Consensus 16 ~G~VPaViY-G 25 (175)
T d2zjrs1 16 ESMIAAVAY-N 25 (175)
T ss_dssp SSCCCEEEE-S
T ss_pred CCCCCEEEE-C
Confidence 589999999 7
No 2
>d1dfup_ b.53.1.1 (P:) Ribosomal protein L25 {Escherichia coli [TaxId: 562]}
Probab=28.55 E-value=3 Score=24.10 Aligned_cols=8 Identities=25% Similarity=0.455 Sum_probs=7.4
Q ss_pred ehhhhhhh
Q 035182 46 GFIPLVII 53 (71)
Q Consensus 46 GfIPlVIy 53 (71)
|+||.|||
T Consensus 24 G~vPaViY 31 (94)
T d1dfup_ 24 NKFPAIIY 31 (94)
T ss_dssp TEEEEEEE
T ss_pred CCccEEEE
Confidence 78999999
No 3
>d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=21.84 E-value=9.9 Score=24.07 Aligned_cols=9 Identities=56% Similarity=0.925 Sum_probs=7.2
Q ss_pred eeEeehhhh
Q 035182 42 ITHYGFIPL 50 (71)
Q Consensus 42 v~HyGfIPl 50 (71)
-+.|||||=
T Consensus 48 P~nYGfiP~ 56 (170)
T d1qeza_ 48 PFNYGFIPG 56 (170)
T ss_dssp SSEEEECTT
T ss_pred Ccceeeeec
Confidence 378999984
No 4
>d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]}
Probab=18.45 E-value=13 Score=23.58 Aligned_cols=10 Identities=30% Similarity=0.627 Sum_probs=7.8
Q ss_pred eeEeehhhhh
Q 035182 42 ITHYGFIPLV 51 (71)
Q Consensus 42 v~HyGfIPlV 51 (71)
-+.|||||=-
T Consensus 52 P~nYGfiP~T 61 (175)
T d1i40a_ 52 PCNYGYINHT 61 (175)
T ss_dssp SSEEEECTTC
T ss_pred CCcCCccccc
Confidence 4699999953
No 5
>d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]}
Probab=18.13 E-value=13 Score=23.53 Aligned_cols=9 Identities=44% Similarity=0.933 Sum_probs=7.3
Q ss_pred eEeehhhhh
Q 035182 43 THYGFIPLV 51 (71)
Q Consensus 43 ~HyGfIPlV 51 (71)
+.|||||=-
T Consensus 53 ~nYGfiP~T 61 (173)
T d1twla_ 53 VDYGIIPRT 61 (173)
T ss_dssp SEEEECTTC
T ss_pred cccceeecc
Confidence 589999964
No 6
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]}
Probab=15.05 E-value=17 Score=23.06 Aligned_cols=9 Identities=56% Similarity=1.117 Sum_probs=7.3
Q ss_pred eEeehhhhh
Q 035182 43 THYGFIPLV 51 (71)
Q Consensus 43 ~HyGfIPlV 51 (71)
+.|||||=-
T Consensus 53 ~nYGfiP~T 61 (174)
T d2prda_ 53 GDYGFIPST 61 (174)
T ss_dssp SEEEECSSC
T ss_pred CCcceeccc
Confidence 689999954
No 7
>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=14.66 E-value=64 Score=18.37 Aligned_cols=23 Identities=22% Similarity=0.186 Sum_probs=17.9
Q ss_pred CcHHHHHHHHHHhhhhhhhheeeeeEee
Q 035182 19 DSEKSRADCLKEWSTWAMKKAKVITHYG 46 (71)
Q Consensus 19 ~se~sk~R~~k~~~~w~~~~~k~v~HyG 46 (71)
+++++-+++..++ .+++.++|-|
T Consensus 133 G~~~~~~~~~p~L-----~~~~~v~~~G 155 (156)
T d2cvza2 133 GPEEAVERVRPFL-----AYAKKVVHVG 155 (156)
T ss_dssp SCHHHHHHHGGGC-----TTEEEEEEEE
T ss_pred CCHHHHHHHHHHH-----HhcCcCEEeC
Confidence 4467778877777 7899999977
No 8
>d2f20a1 d.303.1.1 (A:2-232) Hypothetical protein BT1218 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=13.91 E-value=22 Score=22.97 Aligned_cols=10 Identities=30% Similarity=0.896 Sum_probs=8.1
Q ss_pred eeeEeehhhh
Q 035182 41 VITHYGFIPL 50 (71)
Q Consensus 41 ~v~HyGfIPl 50 (71)
..++||++|.
T Consensus 55 ~~~~WGl~P~ 64 (231)
T d2f20a1 55 QVFNWGLIPF 64 (231)
T ss_dssp EEEEESCCCT
T ss_pred EEEEcccccc
Confidence 4579999994
No 9
>d1feua_ b.53.1.1 (A:) Ribosomal protein TL5 (general stress protein CTC) {Thermus thermophilus [TaxId: 274]}
Probab=12.81 E-value=11 Score=23.81 Aligned_cols=10 Identities=20% Similarity=0.388 Sum_probs=8.8
Q ss_pred ehhhhhhhhcc
Q 035182 46 GFIPLVIIIGM 56 (71)
Q Consensus 46 GfIPlVIylG~ 56 (71)
|+||.||| |-
T Consensus 22 G~VPaViY-G~ 31 (185)
T d1feua_ 22 GKLPGLMY-NR 31 (185)
T ss_dssp TEEEEEEE-CS
T ss_pred CCceEEEE-CC
Confidence 99999999 63
No 10
>d1s7ja_ d.21.1.2 (A:) Hypothetical protein EF0119 {Enterococcus faecalis [TaxId: 1351]}
Probab=12.32 E-value=76 Score=19.54 Aligned_cols=22 Identities=9% Similarity=-0.169 Sum_probs=19.2
Q ss_pred CcCcHHHHHHHHHHhhhhhhhheeeee
Q 035182 17 AKDSEKSRADCLKEWSTWAMKKAKVIT 43 (71)
Q Consensus 17 ~~~se~sk~R~~k~~~~w~~~~~k~v~ 43 (71)
...+++.+++|++|+ +.+-|+|
T Consensus 28 ~~l~~~~mq~IA~e~-----n~sET~F 49 (260)
T d1s7ja_ 28 KWLPEAVMQNIAIEN-----NLSETAF 49 (260)
T ss_dssp SCCCHHHHHHHHHHH-----CCSCEEE
T ss_pred CCCCHHHHHHHHHHh-----CCCceEE
Confidence 346789999999999 9999988
Done!