BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035183
MGGGMEANKNRFIEEWGAARETLEHNFRWTRRNLAIVGLFGIAVPVFIYKGIVKEFHMQD
EDAGRPYRKFL

High Scoring Gene Products

Symbol, full name Information P value
AT2G31490 protein from Arabidopsis thaliana 1.8e-30

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035183
        (71 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2061305 - symbol:AT2G31490 "AT2G31490" species...   336  1.8e-30   1


>TAIR|locus:2061305 [details] [associations]
            symbol:AT2G31490 "AT2G31490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0009853 "photorespiration"
            evidence=RCA;TAS] [GO:0031966 "mitochondrial membrane"
            evidence=IDA] [GO:0045271 "respiratory chain complex I"
            evidence=IDA] [GO:0005747 "mitochondrial respiratory chain complex
            I" evidence=IDA] EMBL:CP002685 GO:GO:0005747 EMBL:AC007169
            GO:GO:0009853 EMBL:AC007071 EMBL:BT004657 EMBL:AK118471
            EMBL:AK318820 IPI:IPI00525347 PIR:D84721 RefSeq:NP_565726.1
            UniGene:At.43206 IntAct:Q9SIQ8 STRING:Q9SIQ8 PRIDE:Q9SIQ8
            EnsemblPlants:AT2G31490.1 GeneID:817707 KEGG:ath:AT2G31490
            TAIR:At2g31490 InParanoid:Q9SIQ8 OMA:WGSARET PhylomeDB:Q9SIQ8
            ProtClustDB:PLN02755 BioCyc:ARA:AT2G31490-MONOMER
            BioCyc:MetaCyc:AT2G31490-MONOMER ArrayExpress:Q9SIQ8
            Genevestigator:Q9SIQ8 Uniprot:Q9SIQ8
        Length = 71

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 56/71 (78%), Positives = 67/71 (94%)

Query:     1 MGGGMEANKNRFIEEWGAARETLEHNFRWTRRNLAIVGLFGIAVPVFIYKGIVKEFHMQD 60
             MGGGME NKN+FIE+WG+ARE LEHNFRWTRRN A++G+FGIA+P+ +YKGIVK+FHMQD
Sbjct:     1 MGGGMETNKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPIIVYKGIVKDFHMQD 60

Query:    61 EDAGRPYRKFL 71
             EDAGRP+RKFL
Sbjct:    61 EDAGRPHRKFL 71


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.143   0.456    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       71        71   0.00091  102 3  11 22  0.45    28
                                                     29  0.42    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  520 (55 KB)
  Total size of DFA:  104 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.70u 0.12s 7.82t   Elapsed:  00:00:00
  Total cpu time:  7.70u 0.12s 7.82t   Elapsed:  00:00:00
  Start:  Fri May 10 06:21:35 2013   End:  Fri May 10 06:21:35 2013

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