Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>035193
MPSYLDAFFQINFKHEIPADRTGDFNMIYDFLRENWNIVKWVALGVVILQNRFRMGRVDL
TFRFALVVEK

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035193
        (70 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2033718 - symbol:TOM2A "tobamovirus multiplica...   153  9.8e-11   1


>TAIR|locus:2033718 [details] [associations]
            symbol:TOM2A "tobamovirus multiplication 2A" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0016020 "membrane"
            evidence=ISS] [GO:0046786 "viral replication complex formation and
            maintenance" evidence=IMP] [GO:0005773 "vacuole" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
            apparatus" evidence=IDA] InterPro:IPR018499 Pfam:PF00335
            GO:GO:0016021 EMBL:CP002684 GO:GO:0009506 GO:GO:0005794
            GO:GO:0005773 GO:GO:0016020 HOGENOM:HOG000029054 GO:GO:0046786
            EMBL:AF334723 EMBL:AF385687 EMBL:AY088560 EMBL:AB085684
            IPI:IPI00522211 RefSeq:NP_001031127.1 RefSeq:NP_564399.1
            RefSeq:NP_973952.1 UniGene:At.15525 IntAct:Q9C5W7 STRING:Q9C5W7
            PRIDE:Q9C5W7 ProMEX:Q9C5W7 EnsemblPlants:AT1G32400.1
            EnsemblPlants:AT1G32400.2 EnsemblPlants:AT1G32400.3 GeneID:840133
            KEGG:ath:AT1G32400 TAIR:At1g32400 InParanoid:Q9C5W7 OMA:TSEFTYN
            PhylomeDB:Q9C5W7 ProtClustDB:CLSN2688198 ArrayExpress:Q9C5W7
            Genevestigator:Q9C5W7 Uniprot:Q9C5W7
        Length = 280

 Score = 153 (58.9 bits), Expect = 9.8e-11, P = 9.8e-11
 Identities = 25/43 (58%), Positives = 36/43 (83%)

Query:     8 FFQINFKHEIPADRTGDFNMIYDFLRENWNIVKWVALGVVILQ 50
             FF  +++ E+P+DRTG+F+ IY+FLRENW IV+WVALG V+ +
Sbjct:   133 FFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFE 175


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.333   0.146   0.467    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       70        70   0.00091  102 3  11 21  0.37    28
                                                     29  0.41    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  537 (57 KB)
  Total size of DFA:  106 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.81u 0.12s 6.93t   Elapsed:  00:00:01
  Total cpu time:  6.81u 0.12s 6.93t   Elapsed:  00:00:01
  Start:  Fri May 10 06:25:58 2013   End:  Fri May 10 06:25:59 2013

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