BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035193
         (70 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q940P5|TET19_ARATH Tetraspanin-19 OS=Arabidopsis thaliana GN=At2g20740 PE=2 SV=1
          Length = 221

 Score = 39.3 bits (90), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 6   DAFFQINFKHEIPADRTGDFNMIYDFLRENWNIVKWVALGVVILQ 50
           D F   ++K + P D +G F+    F+  N+ I KW+ L +V +Q
Sbjct: 107 DIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQ 151


>sp|Q9SVU4|TET20_ARATH Tetraspanin-20 OS=Arabidopsis thaliana GN=At4g28770 PE=2 SV=1
          Length = 281

 Score = 37.0 bits (84), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 26/39 (66%)

Query: 12  NFKHEIPADRTGDFNMIYDFLRENWNIVKWVALGVVILQ 50
           +++ ++P D TG+ N +  F+ EN +I KWV + VV +Q
Sbjct: 167 HWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQ 205


>sp|Q93XY5|TET18_ARATH Tetraspanin-18 OS=Arabidopsis thaliana GN=At2g20230 PE=2 SV=1
          Length = 270

 Score = 36.6 bits (83), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 26/39 (66%)

Query: 12  NFKHEIPADRTGDFNMIYDFLRENWNIVKWVALGVVILQ 50
           +++ ++P D TG+ + +  F+ EN +I KWV + VV +Q
Sbjct: 156 HWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQ 194


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.333    0.146    0.467 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,043,027
Number of Sequences: 539616
Number of extensions: 883104
Number of successful extensions: 1789
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1786
Number of HSP's gapped (non-prelim): 3
length of query: 70
length of database: 191,569,459
effective HSP length: 42
effective length of query: 28
effective length of database: 168,905,587
effective search space: 4729356436
effective search space used: 4729356436
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 55 (25.8 bits)