BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035197
MAGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSFSFVHFVLPLIHDLLY
LCSSFPHPLL

High Scoring Gene Products

Symbol, full name Information P value
AT2G40765 protein from Arabidopsis thaliana 2.3e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035197
        (70 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006312 - symbol:AT2G40765 "AT2G40765" speci...   118  2.3e-07   1


>TAIR|locus:505006312 [details] [associations]
            symbol:AT2G40765 "AT2G40765" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005750 "mitochondrial respiratory chain complex
            III" evidence=IDA] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005750
            UniGene:At.25019 UniGene:At.27873 EMBL:AF370214 EMBL:AY085666
            EMBL:AY142541 IPI:IPI00521439 RefSeq:NP_565941.1 IntAct:Q94K78
            STRING:Q94K78 PaxDb:Q94K78 PRIDE:Q94K78 EnsemblPlants:AT2G40765.1
            GeneID:818673 KEGG:ath:AT2G40765 TAIR:At2g40765 eggNOG:NOG300346
            HOGENOM:HOG000029090 InParanoid:Q94K78 OMA:AGENAMF
            ProtClustDB:CLSN2697018 ArrayExpress:Q94K78 Genevestigator:Q94K78
            Uniprot:Q94K78
        Length = 57

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 23/53 (43%), Positives = 37/53 (69%)

Query:     1 MAGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSFSFVHFVLP 53
             MAG + +L  +KPK  +Q +D+QAAA WG+AA +GA++++Q F +    F+ P
Sbjct:     1 MAGTSGLLNAVKPK--IQTIDIQAAAGWGIAAAAGAIWVVQPFGWIKKTFIDP 51


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.142   0.443    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       70        70   0.00091  102 3  11 21  0.36    28
                                                     29  0.41    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  440 (47 KB)
  Total size of DFA:  81 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.29u 0.19s 7.48t   Elapsed:  00:00:01
  Total cpu time:  7.29u 0.19s 7.48t   Elapsed:  00:00:01
  Start:  Fri May 10 06:26:29 2013   End:  Fri May 10 06:26:30 2013

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