BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035197
         (70 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224145008|ref|XP_002325493.1| predicted protein [Populus trichocarpa]
 gi|118482907|gb|ABK93367.1| unknown [Populus trichocarpa]
 gi|118483491|gb|ABK93644.1| unknown [Populus trichocarpa]
 gi|118487244|gb|ABK95450.1| unknown [Populus trichocarpa]
 gi|118488463|gb|ABK96046.1| unknown [Populus trichocarpa]
 gi|222862368|gb|EEE99874.1| predicted protein [Populus trichocarpa]
          Length = 59

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 34/45 (75%)

Query: 1  MAGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          MAGE +M KFL P+ RLQ  D+Q AAFWGVAA + AL+L+Q F +
Sbjct: 1  MAGENAMFKFLSPRLRLQSTDIQTAAFWGVAAGTTALWLVQPFDW 45


>gi|356509088|ref|XP_003523284.1| PREDICTED: uncharacterized protein LOC100811454 [Glycine max]
          Length = 52

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 25/30 (83%)

Query: 16 RLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          RLQP DV+AAA WGV AV+GALYL+Q + +
Sbjct: 9  RLQPTDVKAAALWGVTAVTGALYLVQPWGW 38


>gi|356516225|ref|XP_003526796.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa
          protein-like [Glycine max]
          Length = 52

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 24/30 (80%)

Query: 16 RLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          RLQP DV+AAA WGV A +GALYLIQ + +
Sbjct: 9  RLQPTDVKAAALWGVTAATGALYLIQPWGW 38


>gi|293336024|ref|NP_001169741.1| uncharacterized protein LOC100383622 [Zea mays]
 gi|224031345|gb|ACN34748.1| unknown [Zea mays]
 gi|414591192|tpg|DAA41763.1| TPA: hypothetical protein ZEAMMB73_771050 [Zea mays]
          Length = 103

 Score = 43.1 bits (100), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 2  AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQV 42
          A  + + +F+ P+SR Q  D+ AAA WGV A +  LYL+QV
Sbjct: 5  ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQV 45


>gi|326518062|dbj|BAK07283.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 60

 Score = 43.1 bits (100), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)

Query: 2  AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          A  +++ +FL  + R+QP DV A A WGVAA S A+YL+Q F +
Sbjct: 5  ASSSTLSRFLSSR-RIQPADVTALATWGVAAGSAAIYLVQPFDW 47


>gi|115474091|ref|NP_001060644.1| Os07g0680300 [Oryza sativa Japonica Group]
 gi|113612180|dbj|BAF22558.1| Os07g0680300 [Oryza sativa Japonica Group]
 gi|218200264|gb|EEC82691.1| hypothetical protein OsI_27348 [Oryza sativa Indica Group]
 gi|222637693|gb|EEE67825.1| hypothetical protein OsJ_25595 [Oryza sativa Japonica Group]
          Length = 61

 Score = 42.7 bits (99), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 2  AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          A  + + +F+ P+ R Q  D+ AAA WGV A + A+YL+Q F +
Sbjct: 5  ASSSGLFRFISPRRRPQSTDIAAAATWGVFAGTAAIYLVQPFDW 48


>gi|242051302|ref|XP_002463395.1| hypothetical protein SORBIDRAFT_02g043020 [Sorghum bicolor]
 gi|241926772|gb|EER99916.1| hypothetical protein SORBIDRAFT_02g043020 [Sorghum bicolor]
          Length = 61

 Score = 42.7 bits (99), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 2  AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          A  + + +F+ P+SR Q  D+ AAA WGV A +  LYL+Q F +
Sbjct: 5  ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQPFDW 48


>gi|195619556|gb|ACG31608.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
          mays]
 gi|195620534|gb|ACG32097.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
          mays]
 gi|195626768|gb|ACG35214.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
          mays]
          Length = 61

 Score = 42.7 bits (99), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 2  AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          A  + + +F+ P+SR Q  D+ AAA WGV A +  LYL+Q F +
Sbjct: 5  ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQPFDW 48


>gi|194692718|gb|ACF80443.1| unknown [Zea mays]
 gi|195638680|gb|ACG38808.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
          mays]
 gi|414591193|tpg|DAA41764.1| TPA: Ubiquinol-cytochrome c reductase complex protein [Zea mays]
          Length = 62

 Score = 42.7 bits (99), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 2  AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          A  + + +F+ P+SR Q  D+ AAA WGV A +  LYL+Q F +
Sbjct: 5  ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQPFDW 48


>gi|195609334|gb|ACG26497.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
          mays]
 gi|195659251|gb|ACG49093.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
          mays]
 gi|414888122|tpg|DAA64136.1| TPA: ubiquinol-cytochrome c reductase complex protein [Zea mays]
          Length = 61

 Score = 42.7 bits (99), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 2  AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          A  + + +F+ P+SR Q  D+ AAA WGV A +  LYL+Q F +
Sbjct: 5  ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQPFDW 48


>gi|116780845|gb|ABK21843.1| unknown [Picea sitchensis]
          Length = 63

 Score = 41.6 bits (96), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 30/49 (61%)

Query: 3  GEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSFSFVHFV 51
          G +S+LKF+  + R QP D  A A WGVAA + AL++IQ F +    F 
Sbjct: 6  GGSSLLKFVPIRIRPQPSDFTAVATWGVAAGTVALWMIQPFDWIKEQFT 54


>gi|414591194|tpg|DAA41765.1| TPA: hypothetical protein ZEAMMB73_771050 [Zea mays]
          Length = 81

 Score = 40.8 bits (94), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 2  AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQV 42
          A  + + +F+ P+SR Q  D+ AAA WGV A +  LYL+Q 
Sbjct: 5  ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQT 45


>gi|225448725|ref|XP_002280954.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa
          protein [Vitis vinifera]
          Length = 59

 Score = 40.0 bits (92), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 34/45 (75%)

Query: 1  MAGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          M+  ++M KFLKP  R QPVD+QAAA WGVA V+ ALYL+Q F +
Sbjct: 1  MSSGSAMFKFLKPSVRPQPVDIQAAAAWGVAGVTTALYLVQPFDW 45


>gi|218196556|gb|EEC78983.1| hypothetical protein OsI_19470 [Oryza sativa Indica Group]
          Length = 66

 Score = 38.5 bits (88), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 4  EASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
             + +FL P  R Q  DV AAA W VA V+ A++L+Q F +
Sbjct: 7  NGRLFRFLPPHRRPQGTDVAAAAGWTVAGVATAVWLVQPFDW 48


>gi|449441246|ref|XP_004138393.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa
          protein-like [Cucumis sativus]
 gi|449529780|ref|XP_004171876.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa
          protein-like [Cucumis sativus]
          Length = 57

 Score = 38.5 bits (88), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 33/45 (73%)

Query: 1  MAGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          MAGE+S+ KFL P  R Q  D+QAAA WGVAA + AL++IQ F +
Sbjct: 1  MAGESSLFKFLSPGRRFQSTDIQAAAGWGVAAATTALWVIQPFDW 45


>gi|168049305|ref|XP_001777104.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671547|gb|EDQ58097.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 61

 Score = 38.1 bits (87), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 6  SMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          S+LKF+    R Q  DV +A  WG  A  GAL+L+Q F +
Sbjct: 9  SLLKFIPKVIRPQTSDVSSAVLWGTTAACGALWLVQPFDW 48


>gi|297736472|emb|CBI25343.3| unnamed protein product [Vitis vinifera]
          Length = 53

 Score = 37.7 bits (86), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 30/39 (76%)

Query: 7  MLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQVFSF 45
          M KFLKP  R QPVD+QAAA WGVA V+ ALYL+Q F +
Sbjct: 1  MFKFLKPSVRPQPVDIQAAAAWGVAGVTTALYLVQPFDW 39


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.331    0.142    0.443 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,030,284,984
Number of Sequences: 23463169
Number of extensions: 30767830
Number of successful extensions: 105279
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105260
Number of HSP's gapped (non-prelim): 19
length of query: 70
length of database: 8,064,228,071
effective HSP length: 42
effective length of query: 28
effective length of database: 7,078,774,973
effective search space: 198205699244
effective search space used: 198205699244
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 69 (31.2 bits)