BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035213
MWTLGNAGMGALQRLAKDSNPAIAAAASKTIFELKKQWEIEEGDSWRFMMNPKPAEGEET
EEASDDADTN

High Scoring Gene Products

Symbol, full name Information P value
AT1G66330 protein from Arabidopsis thaliana 2.1e-18

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035213
        (70 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2201547 - symbol:AT1G66330 species:3702 "Arabi...   227  2.1e-18   1


>TAIR|locus:2201547 [details] [associations]
            symbol:AT1G66330 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0010150 "leaf
            senescence" evidence=IMP] [GO:0010228 "vegetative to reproductive
            phase transition of meristem" evidence=IMP] [GO:0034599 "cellular
            response to oxidative stress" evidence=IMP] [GO:0072593 "reactive
            oxygen species metabolic process" evidence=IMP] [GO:0010264
            "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA]
            EMBL:CP002684 GO:GO:0009507 Gene3D:1.25.10.10 InterPro:IPR011989
            GO:GO:0034599 GO:GO:0010150 GO:GO:0072593 GO:GO:0010228
            EMBL:AC020665 IPI:IPI00527820 PIR:E96688 RefSeq:NP_564872.1
            RefSeq:NP_974095.1 UniGene:At.18041 STRING:Q9C8Y4 PRIDE:Q9C8Y4
            EnsemblPlants:AT1G66330.1 EnsemblPlants:AT1G66330.2 GeneID:842950
            KEGG:ath:AT1G66330 TAIR:At1g66330 InParanoid:Q9C8Y4 OMA:FVYNDAK
            PhylomeDB:Q9C8Y4 ProtClustDB:CLSN2689043 Genevestigator:Q9C8Y4
            Uniprot:Q9C8Y4
        Length = 417

 Score = 227 (85.0 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 44/51 (86%), Positives = 47/51 (92%)

Query:     1 MWTLGNAGMGALQRLAKDSNPAIAAAASKTIFELKKQWEIEEGDSWRFMMN 51
             MWTLGNAGMGALQRLA+DSNPAIAAAAS+ I  LKKQWE+EEGDS RFMMN
Sbjct:   350 MWTLGNAGMGALQRLAEDSNPAIAAAASRAINALKKQWEVEEGDSLRFMMN 400


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.127   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       70        56   0.00091  102 3  11 23  0.36    28
                                                     29  0.42    27


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  481 (51 KB)
  Total size of DFA:  92 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.10u 0.18s 7.28t   Elapsed:  00:00:01
  Total cpu time:  7.10u 0.18s 7.28t   Elapsed:  00:00:01
  Start:  Fri May 10 06:31:42 2013   End:  Fri May 10 06:31:43 2013

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