Query 035225
Match_columns 70
No_of_seqs 102 out of 319
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 16:49:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035225.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035225hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1mit_A RCMTI-V, trypsin inhibi 100.0 3.4E-38 1.2E-42 182.9 7.9 68 3-70 2-69 (69)
2 1vbw_A Trypsin inhibitor BGIT; 100.0 5.4E-38 1.8E-42 181.7 7.2 68 3-70 1-68 (68)
3 1dwm_A LUTI, linum usitatissin 100.0 1.7E-37 5.9E-42 180.1 7.8 69 2-70 2-70 (70)
4 3rdy_A BWI-1=protease inhibito 100.0 1.5E-35 5.2E-40 176.0 7.5 67 3-69 12-78 (79)
5 1to2_I Chymotrypsin inhibitor 100.0 1.2E-35 4.1E-40 170.1 6.4 63 8-70 2-64 (64)
6 2ci2_I Chymotrypsin inhibitor 100.0 4.9E-35 1.7E-39 174.9 7.0 66 5-70 18-83 (83)
7 1cse_I Eglin C; complex(serine 100.0 5.1E-35 1.7E-39 170.0 6.2 65 6-70 5-70 (70)
8 1cq4_A Protein (serine protein 99.9 3.6E-26 1.2E-30 124.0 4.2 46 8-53 2-47 (47)
9 1hym_A CMTI-V, hydrolyzed cucu 99.9 3.6E-22 1.2E-26 107.5 4.9 44 2-46 2-45 (45)
10 1hym_B CMTI-V, hydrolyzed cucu 99.4 1.9E-13 6.6E-18 65.7 3.1 24 47-70 1-24 (26)
11 3ouv_A Serine/threonine protei 76.5 1.5 5.2E-05 23.5 1.9 23 8-30 7-29 (71)
12 2kuf_A PKNB, serine/threonine- 68.5 5.8 0.0002 23.6 3.4 22 8-29 7-28 (139)
13 3ge3_E Toluene-4-monooxygenase 52.0 17 0.00057 21.7 3.3 24 22-45 27-50 (103)
14 2kue_A PKNB, serine/threonine- 46.8 11 0.00037 22.5 1.9 23 9-31 76-98 (138)
15 2kui_A PKNB, serine/threonine- 46.0 43 0.0015 22.2 5.0 57 9-67 9-79 (275)
16 2kud_A PKNB, serine/threonine- 41.3 15 0.00051 21.8 1.9 22 9-30 9-30 (140)
17 2yh9_A Small protein A, BAME p 39.5 24 0.00082 19.6 2.5 18 49-66 54-71 (88)
18 2oqc_A Penicillin V acylase; N 35.1 33 0.0011 23.4 3.1 52 17-68 112-176 (327)
19 3db7_A Putative calcium-regula 35.0 55 0.0019 19.4 3.8 44 21-65 80-124 (127)
20 1u07_A TONB protein; beta-hair 34.1 24 0.00081 19.4 1.9 15 52-66 28-42 (90)
21 3dlm_A Histone-lysine N-methyl 29.8 45 0.0015 22.3 3.0 59 7-65 128-189 (213)
22 3py9_A Protein kinase; pasta, 29.2 27 0.00093 23.6 1.9 22 8-29 6-27 (294)
23 4a7k_A Aldos-2-ulose dehydrata 28.9 40 0.0014 27.1 2.9 36 33-68 470-511 (900)
24 3djc_A Type III pantothenate k 28.8 30 0.001 23.2 2.0 39 10-48 102-140 (266)
25 3c3d_A 2-phospho-L-lactate tra 28.7 39 0.0013 23.6 2.6 25 18-46 173-197 (311)
26 2bjf_A Choloylglycine hydrolas 28.1 56 0.0019 22.3 3.4 52 17-68 114-178 (329)
27 2km7_A Small protein A; BAME, 28.0 33 0.0011 19.7 1.9 17 50-66 69-85 (102)
28 2yka_B ORF57 protein, 52 kDa i 32.5 14 0.00047 16.8 0.0 14 2-17 4-17 (26)
29 2p0y_A Hypothetical protein LP 26.1 46 0.0016 23.5 2.6 26 17-46 177-202 (341)
30 2k9k_A TONB2; metal transport; 25.1 31 0.0011 19.4 1.4 15 52-66 43-57 (106)
31 3pjy_A Hypothetical signal pep 25.1 29 0.001 21.2 1.3 13 54-66 72-84 (136)
32 3m7a_A Uncharacterized protein 25.0 29 0.001 21.4 1.3 13 54-66 86-98 (140)
33 3elg_A Uncharacterized peripla 23.8 1E+02 0.0035 18.1 3.7 42 23-65 83-125 (128)
34 2q7x_A UPF0052 protein SP_1565 22.8 48 0.0017 23.1 2.2 26 17-46 173-198 (326)
35 2o2z_A Hypothetical protein; s 22.7 58 0.002 22.8 2.6 23 19-45 169-191 (323)
36 2ppv_A Uncharacterized protein 22.3 60 0.0021 22.9 2.6 24 19-46 168-191 (332)
37 1vm9_A Toluene-4-monooxygenase 22.0 59 0.002 18.2 2.2 27 39-65 12-39 (111)
38 2con_A RUH-035 protein, NIN on 22.0 30 0.001 19.6 0.8 22 43-64 27-55 (79)
39 1yr1_A Divib, FTSQ, cell-divis 20.7 81 0.0028 18.4 2.7 54 11-64 38-94 (119)
40 2jo6_A Nitrite reductase [NAD( 20.1 35 0.0012 19.3 0.9 23 39-61 17-39 (113)
No 1
>1mit_A RCMTI-V, trypsin inhibitor V; serine protease inhibitor (RCMTI-V); NMR {Cucurbita maxima} SCOP: d.40.1.1 PDB: 1tin_A
Probab=100.00 E-value=3.4e-38 Score=182.93 Aligned_cols=68 Identities=54% Similarity=0.998 Sum_probs=66.9
Q ss_pred CCCCCCCCcccccccchHHHHHHHHhhCCCCceEEecCCCcccCCccCCeEEEEeCCCCcEEcCCccC
Q 035225 3 TFCSGKTSWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTREFRCDRVWVWVDAIGRVSKPPVVG 70 (70)
Q Consensus 3 ~~c~~k~~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~df~~~RV~v~vD~~g~V~~vP~iG 70 (70)
+.|++|++||||||+++++|+.+|++|+|++.++||++|+++||||||||||||+|++|+|+++|+||
T Consensus 2 ~~c~~K~sWpELVG~~~~~A~~~I~~d~p~v~v~vl~~g~~vT~Dfr~~RV~V~vD~~g~V~~vP~vG 69 (69)
T 1mit_A 2 SSCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 69 (69)
T ss_dssp CCCSSCSCCCCCTTSHHHHHHHHHHHHCTTSEEEEEETTCCCCSSCCTTEEEEEEETTTEEECCSSCC
T ss_pred CCCCCcCcCHHHcCccHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEeCCcCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999998
No 2
>1vbw_A Trypsin inhibitor BGIT; BGTI, protein binding; HET: TLA; 0.93A {Momordica charantia}
Probab=100.00 E-value=5.4e-38 Score=181.67 Aligned_cols=68 Identities=50% Similarity=1.008 Sum_probs=66.5
Q ss_pred CCCCCCCCcccccccchHHHHHHHHhhCCCCceEEecCCCcccCCccCCeEEEEeCCCCcEEcCCccC
Q 035225 3 TFCSGKTSWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTREFRCDRVWVWVDAIGRVSKPPVVG 70 (70)
Q Consensus 3 ~~c~~k~~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~df~~~RV~v~vD~~g~V~~vP~iG 70 (70)
+.|++|++||||||+++++|+.+|++|+|++.+++|++|+++||||||||||||+|++|+|+++|+||
T Consensus 1 ~~c~~K~sWpELVG~~~~~A~~~I~~d~p~~~v~vl~~g~~vT~Df~~~RV~v~vD~~g~V~~vP~vG 68 (68)
T 1vbw_A 1 SRCQGKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERGIVARPPTIG 68 (68)
T ss_dssp CCSCSCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTSCCCCSCCTTEEEEEECTTSBBCSCCEEC
T ss_pred CCCCCCCcCHHHCCcCHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEecCcCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999998
No 3
>1dwm_A LUTI, linum usitatissinum trypsin inhibitor; serine proteinase inhibitor; NMR {Linum usitatissimum} SCOP: d.40.1.1
Probab=100.00 E-value=1.7e-37 Score=180.14 Aligned_cols=69 Identities=46% Similarity=0.875 Sum_probs=67.4
Q ss_pred CCCCCCCCCcccccccchHHHHHHHHhhCCCCceEEecCCCcccCCccCCeEEEEeCCCCcEEcCCccC
Q 035225 2 ATFCSGKTSWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTREFRCDRVWVWVDAIGRVSKPPVVG 70 (70)
Q Consensus 2 ~~~c~~k~~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~df~~~RV~v~vD~~g~V~~vP~iG 70 (70)
|+.|++|++||||||+++++|+.+|++|+|++.+++|+||+++|||||+||||||+|++|+|+++|+||
T Consensus 2 ~~~c~~k~sWpelVG~~~~~A~~~i~~e~p~~~vrvl~pg~~vT~Dfr~~RV~v~vD~~g~V~~vP~ig 70 (70)
T 1dwm_A 2 SRRCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVTSVPHIT 70 (70)
T ss_dssp CCCCSSCSBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCCSCCTTEEEEEECTTSBBCSCCBBC
T ss_pred CCcCCChhHhHHHcCCcHHHHHHHHHHhCCCceEEEecCCCccCCccCCCeEEEEECCCCeEEeCCcCC
Confidence 567999999999999999999999999999999999999999999999999999999999999999998
No 4
>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} SCOP: d.40.1.0 PDB: 3rdz_C
Probab=100.00 E-value=1.5e-35 Score=176.02 Aligned_cols=67 Identities=54% Similarity=0.914 Sum_probs=64.7
Q ss_pred CCCCCCCCcccccccchHHHHHHHHhhCCCCceEEecCCCcccCCccCCeEEEEeCCCCcEEcCCcc
Q 035225 3 TFCSGKTSWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTREFRCDRVWVWVDAIGRVSKPPVV 69 (70)
Q Consensus 3 ~~c~~k~~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~df~~~RV~v~vD~~g~V~~vP~i 69 (70)
.+|++|+|||||||+++++|+++|++|+|++.++||++|+++||||||||||||+|++|+|+++|+|
T Consensus 12 ~~~~~K~sWPELVG~~~~~A~~~I~~e~P~v~v~Vl~~Gs~VT~Dfr~~RVrV~VD~~g~V~~~P~i 78 (79)
T 3rdy_A 12 RQCSGKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVVVDTPVV 78 (79)
T ss_dssp -CCCSCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCSCCCSSEEEEEECTTSBBCSCCBB
T ss_pred hcCCCCCcChHHCCcCHHHHHHHHHHHCCCCceEEeCCCCccCCccCCCEEEEEECCCCeEEeCcee
Confidence 3688999999999999999999999999999999999999999999999999999999999999997
No 5
>1to2_I Chymotrypsin inhibitor 2; serine protease, hydrolase; HET: CIT 15P; 1.30A {Hordeum vulgare subsp} SCOP: d.40.1.1 PDB: 1tm3_I* 1tm5_I* 1tm1_I* 1tm7_I* 1tm4_I* 1y4a_I* 1y4d_I 1tmg_I* 1lw6_I 1y3b_I* 1y1k_I* 1y34_I* 1y48_I* 1y3d_I* 1y3c_I* 1y33_I* 1to1_I* 1y3f_I* 3ci2_A 1coa_I ...
Probab=100.00 E-value=1.2e-35 Score=170.07 Aligned_cols=63 Identities=43% Similarity=0.703 Sum_probs=62.3
Q ss_pred CCCcccccccchHHHHHHHHhhCCCCceEEecCCCcccCCccCCeEEEEeCCCCcEEcCCccC
Q 035225 8 KTSWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTREFRCDRVWVWVDAIGRVSKPPVVG 70 (70)
Q Consensus 8 k~~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~df~~~RV~v~vD~~g~V~~vP~iG 70 (70)
|+|||||||+++++|+.+|++|+|++.+++|++|+++||||||||||||+|++|+|+++|+||
T Consensus 2 k~sWPELVG~~~~~A~~~I~~d~p~v~v~vl~~g~~vT~Df~~~RV~v~vD~~g~V~~vP~iG 64 (64)
T 1to2_I 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVPRVG 64 (64)
T ss_dssp CCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCEEECBCCTTEEEEEECTTSBBCSCCEEC
T ss_pred CcCCHhhCCCcHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCeEEecCcCC
Confidence 899999999999999999999999999999999999999999999999999999999999998
No 6
>2ci2_I Chymotrypsin inhibitor 2; proteinase inhibitor (chymotrypsin); 2.00A {Hordeum vulgare} SCOP: d.40.1.1 PDB: 2sni_I
Probab=100.00 E-value=4.9e-35 Score=174.93 Aligned_cols=66 Identities=41% Similarity=0.615 Sum_probs=63.8
Q ss_pred CCCCCCcccccccchHHHHHHHHhhCCCCceEEecCCCcccCCccCCeEEEEeCCCCcEEcCCccC
Q 035225 5 CSGKTSWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTREFRCDRVWVWVDAIGRVSKPPVVG 70 (70)
Q Consensus 5 c~~k~~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~df~~~RV~v~vD~~g~V~~vP~iG 70 (70)
|.+|++||||||+++++|+.+|++|+|++.++||++|+++||||||||||||+|++|+|+++|+||
T Consensus 18 ~~~K~sWPELVG~~~~~A~~~I~~d~p~v~vrVl~~G~~VT~Dfr~dRV~V~vD~~g~V~~vP~vG 83 (83)
T 2ci2_I 18 HNLKTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAEVPRVG 83 (83)
T ss_dssp -CCCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCSCCCTTEEEEEECTTSBBCSCCEEC
T ss_pred CCChhhhHHHcCCcHHHHHHHHHhhCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEeCCcCC
Confidence 458999999999999999999999999999999999999999999999999999999999999998
No 7
>1cse_I Eglin C; complex(serine proteinase-inhibitor); 1.20A {Hirudo medicinalis} SCOP: d.40.1.1 PDB: 2sec_I 2tec_I 1egl_A 1tec_I 1acb_I 3tec_I 1sib_I 1sbn_I 1mee_I 1egp_A 1egp_B
Probab=100.00 E-value=5.1e-35 Score=170.04 Aligned_cols=65 Identities=35% Similarity=0.495 Sum_probs=61.3
Q ss_pred CCCCCcccccccchHHHHHHHHhhCCCCceEEecCCCcccCCccCCeEEEEeC-CCCcEEcCCccC
Q 035225 6 SGKTSWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTREFRCDRVWVWVD-AIGRVSKPPVVG 70 (70)
Q Consensus 6 ~~k~~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~df~~~RV~v~vD-~~g~V~~vP~iG 70 (70)
++|++||||||+++++|+.+|++|+|++.+++|++|+++||||||||||||+| ++|+|+++|+||
T Consensus 5 ~~k~sWPELVG~~~~~A~~~I~~d~p~~~v~vl~~g~~vT~Df~~~RV~V~vD~~~g~V~~vP~iG 70 (70)
T 1cse_I 5 SELKSFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPHVG 70 (70)
T ss_dssp ---CBCGGGTTSBHHHHHHHHHHHCTTSEEEEEETTCCEECCCCTTEEEEEEETTTTEECSCCEEC
T ss_pred CCCCcCHHHcCccHHHHHHHHHHHCCCCeEEEecCCCccCCccCCCeEEEEEcCCCCEEEeCCcCC
Confidence 36999999999999999999999999999999999999999999999999999 999999999998
No 8
>1cq4_A Protein (serine proteinase inhibitor 2); serine protease inhibitor, polyglutamine insertion mutant, subtilisin- chymotrypsin inhibitor-2; 1.80A {Hordeum vulgare} SCOP: d.40.1.1
Probab=99.92 E-value=3.6e-26 Score=124.02 Aligned_cols=46 Identities=37% Similarity=0.469 Sum_probs=36.5
Q ss_pred CCCcccccccchHHHHHHHHhhCCCCceEEecCCCcccCCccCCeE
Q 035225 8 KTSWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTREFRCDRV 53 (70)
Q Consensus 8 k~~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~df~~~RV 53 (70)
|+|||||||+++++|+.+|++|||++.++||++|+++||||||||+
T Consensus 2 K~sWPELVG~~~~~A~~~I~~e~p~v~v~vl~~gs~vT~Df~~~R~ 47 (47)
T 1cq4_A 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMGQQQQGM 47 (47)
T ss_dssp CCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCC---------
T ss_pred CcCChhhcCccHHHHHHHHHHHCCCCEEEEeCCCCCcCcccCCCCC
Confidence 8999999999999999999999999999999999999999999996
No 9
>1hym_A CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1
Probab=99.86 E-value=3.6e-22 Score=107.47 Aligned_cols=44 Identities=57% Similarity=0.932 Sum_probs=42.1
Q ss_pred CCCCCCCCCcccccccchHHHHHHHHhhCCCCceEEecCCCcccC
Q 035225 2 ATFCSGKTSWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTR 46 (70)
Q Consensus 2 ~~~c~~k~~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~ 46 (70)
|+ |++|+|||||||+++++|+++|++|||++.+.||++|+++|+
T Consensus 2 s~-c~~K~sWPELVG~~~~~A~~~I~~e~P~v~v~vl~~gs~vT~ 45 (45)
T 1hym_A 2 SS-CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTK 45 (45)
T ss_dssp CC-CCSCSBCCCCTTSCHHHHHHHHHHHCTTCEEEEEECCSCCCC
T ss_pred CC-CCCCCcChhhcCCcHHHHHHHHHHHCCCCeEEEecCCCcCCC
Confidence 44 999999999999999999999999999999999999999996
No 10
>1hym_B CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1
Probab=99.39 E-value=1.9e-13 Score=65.75 Aligned_cols=24 Identities=50% Similarity=1.172 Sum_probs=23.5
Q ss_pred CccCCeEEEEeCCCCcEEcCCccC
Q 035225 47 EFRCDRVWVWVDAIGRVSKPPVVG 70 (70)
Q Consensus 47 df~~~RV~v~vD~~g~V~~vP~iG 70 (70)
||||+||+||+|++|+|+++|+||
T Consensus 1 Df~~~RVrvfvd~~g~V~~~P~iG 24 (26)
T 1hym_B 1 DFRCNRVRIWVNKRGLVVSPPRIG 24 (26)
T ss_dssp CCCTTEEEEEEETTTEEECCSBCC
T ss_pred CCCCCEEEEEECCCCcEEECCccc
Confidence 899999999999999999999998
No 11
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=76.46 E-value=1.5 Score=23.50 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=18.7
Q ss_pred CCCcccccccchHHHHHHHHhhC
Q 035225 8 KTSWPELVGEIGAVAAATIKLQN 30 (70)
Q Consensus 8 k~~WpelVG~~~~~A~~~I~~~~ 30 (70)
+..=|+|+|++.++|+..++..-
T Consensus 7 ~v~VPdv~G~~~~~A~~~L~~~G 29 (71)
T 3ouv_A 7 TKDIPDVAGQTVDVAQKNMNVYG 29 (71)
T ss_dssp EEECCCCTTCBHHHHHHHHHHTT
T ss_pred ceECCCcCCCCHHHHHHHHHHCC
Confidence 34569999999999998887653
No 12
>2kuf_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=68.48 E-value=5.8 Score=23.64 Aligned_cols=22 Identities=18% Similarity=0.374 Sum_probs=18.1
Q ss_pred CCCcccccccchHHHHHHHHhh
Q 035225 8 KTSWPELVGEIGAVAAATIKLQ 29 (70)
Q Consensus 8 k~~WpelVG~~~~~A~~~I~~~ 29 (70)
+..-|+|+|++..+|...++..
T Consensus 7 ~v~vPdv~G~~~~~A~~~L~~~ 28 (139)
T 2kuf_A 7 TKDIPDVAGQTVDVAQKNLNVY 28 (139)
T ss_dssp EEEECCCCSSBHHHHHHHHHHH
T ss_pred ceeCCCcCCCCHHHHHHHHHHC
Confidence 4557899999999999888754
No 13
>3ge3_E Toluene-4-monooxygenase system protein D; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} SCOP: d.137.1.1 PDB: 3dhh_E* 3dhi_E 3ge8_E 3i5j_E 3i63_E 3q14_E 3q2a_E* 3q3m_E* 3q3n_E* 3q3o_E* 1g10_A 1g11_A 2bf2_A 3ri7_E 2bf5_A 2bf3_A* 2bf3_B*
Probab=51.97 E-value=17 Score=21.67 Aligned_cols=24 Identities=17% Similarity=0.052 Sum_probs=18.1
Q ss_pred HHHHHHhhCCCCceEEecCCCccc
Q 035225 22 AAATIKLQNPIVNPIILMLGTPVT 45 (70)
Q Consensus 22 A~~~I~~~~p~~~v~vl~pg~~vT 45 (70)
..++|.++||++.++|...+.++-
T Consensus 27 iVeaI~~DNP~~~v~V~d~pa~vr 50 (103)
T 3ge3_E 27 VIETAEIDNPGKEITVEDRRAYVR 50 (103)
T ss_dssp HHHHHHHHCTTSCCEEEECSSEEE
T ss_pred HHHHHHhHCcCCEEEEeecCCEEE
Confidence 356899999999987766666553
No 14
>2kue_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=46.85 E-value=11 Score=22.46 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=18.9
Q ss_pred CCcccccccchHHHHHHHHhhCC
Q 035225 9 TSWPELVGEIGAVAAATIKLQNP 31 (70)
Q Consensus 9 ~~WpelVG~~~~~A~~~I~~~~p 31 (70)
..=|+|+|++..+|...++..--
T Consensus 76 v~vPd~~G~~~~~A~~~L~~~Gl 98 (138)
T 2kue_A 76 KDIPDVAGQTVDVAQKNLNVYGF 98 (138)
T ss_dssp EECCCCTTSBHHHHHHHHHHHSC
T ss_pred eeCCccCCCCHHHHHHHHHHCCC
Confidence 45789999999999998877543
No 15
>2kui_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=46.04 E-value=43 Score=22.16 Aligned_cols=57 Identities=19% Similarity=0.110 Sum_probs=34.0
Q ss_pred CCcccccccchHHHHHHHHhhCCCCceEEe-------cCCCcccCCc-------cCCeEEEEeCCCCcEEcCC
Q 035225 9 TSWPELVGEIGAVAAATIKLQNPIVNPIIL-------MLGTPVTREF-------RCDRVWVWVDAIGRVSKPP 67 (70)
Q Consensus 9 ~~WpelVG~~~~~A~~~I~~~~p~~~v~vl-------~pg~~vT~df-------~~~RV~v~vD~~g~V~~vP 67 (70)
..=|+|+|++..+|...++...- .+.+. +.|..+..+= .-..|+|++...-.-+.+|
T Consensus 9 v~VP~v~G~~~~~A~~~L~~~gl--~~~~~~~~s~~~~~g~Vi~q~P~~G~~v~~g~~V~l~vs~G~~~v~vP 79 (275)
T 2kui_A 9 VQVPDVRGQSSADAIATLQNRGF--KIRTLQKPDSTIPPDHVIGTDPAANTSVSAGDEITVNVSTGPEQREIP 79 (275)
T ss_dssp EECCCCTTSCHHHHHHHHHHHTC--EEEEEEEESSSSSCSSCSCCCTTTTSEECSSCEEEEEEEESCCEEECC
T ss_pred EECCccCCCCHHHHHHHHHHCCC--eeEEeeeeCCCCCCCEEEEecCCCCCCcCCCCEEEEEEecCCcccccC
Confidence 46799999999999998877543 22222 2333333221 1356888887543334455
No 16
>2kud_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=41.29 E-value=15 Score=21.84 Aligned_cols=22 Identities=27% Similarity=0.362 Sum_probs=18.6
Q ss_pred CCcccccccchHHHHHHHHhhC
Q 035225 9 TSWPELVGEIGAVAAATIKLQN 30 (70)
Q Consensus 9 ~~WpelVG~~~~~A~~~I~~~~ 30 (70)
..-|+|+|++..+|...++...
T Consensus 9 v~vPdv~G~~~~~A~~~L~~~g 30 (140)
T 2kud_A 9 VQVPDVRGQSSADAIATLQNRG 30 (140)
T ss_dssp ECCCCCTTSBHHHHHHHHHHHT
T ss_pred eECCccCCCCHHHHHHHHHHCC
Confidence 5679999999999998887653
No 17
>2yh9_A Small protein A, BAME protein; lipoprotein, 3D domain SWAP, membrane protein; 1.80A {Escherichia coli}
Probab=39.47 E-value=24 Score=19.64 Aligned_cols=18 Identities=6% Similarity=0.047 Sum_probs=15.0
Q ss_pred cCCeEEEEeCCCCcEEcC
Q 035225 49 RCDRVWVWVDAIGRVSKP 66 (70)
Q Consensus 49 ~~~RV~v~vD~~g~V~~v 66 (70)
...++.|+.|++|+|+++
T Consensus 54 ~~~~l~V~Fd~~g~V~~~ 71 (88)
T 2yh9_A 54 TQQTLTLTFNSSGVLTNI 71 (88)
T ss_dssp SCCEEEEEECTTSBEEEE
T ss_pred EEEEEEEEEcCCCeEEEE
Confidence 356799999999999875
No 18
>2oqc_A Penicillin V acylase; NTN-hydrolase, conjugated bIle acid HY choloylglycine hydrolase, hydrolase; 2.50A {Bacillus subtilis}
Probab=35.15 E-value=33 Score=23.44 Aligned_cols=52 Identities=19% Similarity=0.148 Sum_probs=35.6
Q ss_pred cchHHHHHHHHhhC------------CCCceEEe-cCCCcccCCccCCeEEEEeCCCCcEEcCCc
Q 035225 17 EIGAVAAATIKLQN------------PIVNPIIL-MLGTPVTREFRCDRVWVWVDAIGRVSKPPV 68 (70)
Q Consensus 17 ~~~~~A~~~I~~~~------------p~~~v~vl-~pg~~vT~df~~~RV~v~vD~~g~V~~vP~ 68 (70)
++.+||++.+++-. +.++..+- +-|..+..+|..+.+.|+-+.-++.+.-|.
T Consensus 112 ~tV~Ea~~~L~~~~i~~~~~~~~~~~~~~H~~i~D~sG~s~viE~~~g~l~i~~n~~~V~TN~P~ 176 (327)
T 2oqc_A 112 QSLEDVKEKIRSLTIVEKKLDLLDTVLPLHWILSDRTGRNLTIEPRADGLKVYDNQPGVMTNSPD 176 (327)
T ss_dssp CSHHHHHHHGGGEEEBCCCBGGGTBCCCEEEEEECTTSCEEEEEEETTEEEEEECSSCEECSSSC
T ss_pred CCHHHHHHHHHcCceecccccCcCCccceEEEEEcCCCCEEEEEEecCCcEEEeCCceEEcCCCC
Confidence 45677777766533 22332333 347888999999999999887788877664
No 19
>3db7_A Putative calcium-regulated periplasmic protein; structural genomics, joint center for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron} SCOP: d.98.2.1 PDB: 3due_A*
Probab=35.02 E-value=55 Score=19.45 Aligned_cols=44 Identities=9% Similarity=-0.033 Sum_probs=30.7
Q ss_pred HHHHHHHhhCCCCceE-EecCCCcccCCccCCeEEEEeCCCCcEEc
Q 035225 21 VAAATIKLQNPIVNPI-ILMLGTPVTREFRCDRVWVWVDAIGRVSK 65 (70)
Q Consensus 21 ~A~~~I~~~~p~~~v~-vl~pg~~vT~df~~~RV~v~vD~~g~V~~ 65 (70)
.+...|++..|+..+. +=+....--.++. +++-|+.|.+|.+..
T Consensus 80 ~i~~~I~~~yp~~~I~~ie~~~~~YeV~L~-ng~el~Fd~~G~~i~ 124 (127)
T 3db7_A 80 AIQKYVTTNYPDAKVLKIERDKKDYEVKLS-NRTELKFDLKFNLID 124 (127)
T ss_dssp HHHHHHHHHCTTCCEEEEEECSSEEEEEET-TSCEEEEETTCCEEE
T ss_pred HHHHHHHHHCCCCeEEEEEEECCEEEEEEC-CCcEEEEcCCCCEEe
Confidence 3467899999999877 4454433333443 568999999998765
No 20
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=34.08 E-value=24 Score=19.36 Aligned_cols=15 Identities=33% Similarity=0.260 Sum_probs=11.5
Q ss_pred eEEEEeCCCCcEEcC
Q 035225 52 RVWVWVDAIGRVSKP 66 (70)
Q Consensus 52 RV~v~vD~~g~V~~v 66 (70)
.|.+.+|.+|.|..+
T Consensus 28 ~v~~~i~~~G~v~~~ 42 (90)
T 1u07_A 28 KVKFDVTPDGRVDNV 42 (90)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 366788999988764
No 21
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=29.76 E-value=45 Score=22.30 Aligned_cols=59 Identities=15% Similarity=0.069 Sum_probs=42.0
Q ss_pred CCCCcccccccchHHHHHHHHhhCCCCceEEecCCCcccCCccCC--eEEEE-eCCCCcEEc
Q 035225 7 GKTSWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTREFRCD--RVWVW-VDAIGRVSK 65 (70)
Q Consensus 7 ~k~~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~df~~~--RV~v~-vD~~g~V~~ 65 (70)
.|.-|-++=-.+-.+=...-.++.|+-...-+++|+.++.+.+.. +.+|. +|.+-..+.
T Consensus 128 s~~vW~di~~~~~r~FIk~YL~~yP~rpmv~~~~GQ~i~~E~~g~w~~~~V~~vD~SLv~v~ 189 (213)
T 3dlm_A 128 LKKTWEDIEDISCRDFIEEYVTAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGSLVRIL 189 (213)
T ss_dssp CSSGGGGCSCHHHHHHHHHHHHHTTCCCCCCCCTTCEEEEEETTEEEEEEEEEEETTEEEEE
T ss_pred ccchhhhcCcchhHHHHHHHHHhCCCCceEEcCCCCEEEEEecCcEEEEEEEEEcceeEEEE
Confidence 477888876444333333446788888888899999999999998 66664 677655443
No 22
>3py9_A Protein kinase; pasta, muropeptide binding, phosphorylation, membran transferase; 2.20A {Staphylococcus aureus subsp} PDB: 3m9g_A
Probab=29.22 E-value=27 Score=23.58 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=17.4
Q ss_pred CCCcccccccchHHHHHHHHhh
Q 035225 8 KTSWPELVGEIGAVAAATIKLQ 29 (70)
Q Consensus 8 k~~WpelVG~~~~~A~~~I~~~ 29 (70)
...=|+|+|++..+|...++..
T Consensus 6 ~v~VPdv~G~t~~eA~~~L~~~ 27 (294)
T 3py9_A 6 YEETPDVIGKSVKEAEQIFNKN 27 (294)
T ss_dssp --CCCCCTTCCHHHHHHHHHHT
T ss_pred eeECCCcCCCCHHHHHHHHHHC
Confidence 4567999999999999887664
No 23
>4a7k_A Aldos-2-ulose dehydratase; lyase, dehydratase/isomerase, lignin degradation, cortalcerone/microthecin forming, metalloenzyme; 2.00A {Phanerochaete chrysosporium} PDB: 4a7y_A* 4a7z_A*
Probab=28.94 E-value=40 Score=27.11 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=29.9
Q ss_pred CceEEecCCCcccCCccCCeEEEEe------CCCCcEEcCCc
Q 035225 33 VNPIILMLGTPVTREFRCDRVWVWV------DAIGRVSKPPV 68 (70)
Q Consensus 33 ~~v~vl~pg~~vT~df~~~RV~v~v------D~~g~V~~vP~ 68 (70)
++++|+||+..+-.+-|.+-|-|.. |++|+|.++|.
T Consensus 470 ~~~~v~p~~~~~~~~~~~~g~kv~~g~~~~~~~~~~~~~~p~ 511 (900)
T 4a7k_A 470 LTLVVLPPFARLDVERNVSGVKVMAGTVCWADENGKHERVPA 511 (900)
T ss_dssp EEEEEECTTCEEECCTTTCEEEEEEEEEEEEETTEEEEECSC
T ss_pred EEEEEcCCccccccccccCceEEEEEEeeeccCCCcEEeeEC
Confidence 4577999999998888888888754 67999999985
No 24
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=28.78 E-value=30 Score=23.22 Aligned_cols=39 Identities=26% Similarity=0.146 Sum_probs=31.3
Q ss_pred CcccccccchHHHHHHHHhhCCCCceEEecCCCcccCCc
Q 035225 10 SWPELVGEIGAVAAATIKLQNPIVNPIILMLGTPVTREF 48 (70)
Q Consensus 10 ~WpelVG~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~df 48 (70)
.=|+-+|.+--.+.....+..|+....|+--|++.|.|+
T Consensus 102 ~~P~~lG~DR~~~~vaA~~~~~~~~~iVVD~GTA~T~d~ 140 (266)
T 3djc_A 102 RNPVEVGADRIANAIAATHSFPNQNIIVIDFGTATTFCA 140 (266)
T ss_dssp SSGGGSCHHHHHHHHHHHHHSTTSEEEEEEESSEEEEEE
T ss_pred CChhhhHHHHHHHHHHHHHhcCCCCEEEEECCCeeEEEE
Confidence 347789998887776667777766778999999999995
No 25
>3c3d_A 2-phospho-L-lactate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FO1; 2.50A {Methanosarcina mazei GO1} PDB: 2ffe_A* 3c3e_A* 3cgw_A
Probab=28.67 E-value=39 Score=23.58 Aligned_cols=25 Identities=16% Similarity=0.295 Sum_probs=18.7
Q ss_pred chHHHHHHHHhhCCCCceEEecCCCcccC
Q 035225 18 IGAVAAATIKLQNPIVNPIILMLGTPVTR 46 (70)
Q Consensus 18 ~~~~A~~~I~~~~p~~~v~vl~pg~~vT~ 46 (70)
+..+|.++|++. ..+++.||+..|-
T Consensus 173 a~p~vl~AI~~A----D~IvlgPGS~~TS 197 (311)
T 3c3d_A 173 ISPKVLEAFEKE----ENILIGPSNPITS 197 (311)
T ss_dssp CCHHHHHHHHHC----CEEEECSSCTTTT
T ss_pred CCHHHHHHHHhC----CEEEECCCCCHHH
Confidence 345677777764 5799999998873
No 26
>2bjf_A Choloylglycine hydrolase; amidohydrolase, NTN-hydrolase, bIle acids, BSH; HET: DXC; 1.67A {Clostridium perfringens} PDB: 2bjg_A 2rlc_A* 2rf8_A 2rg2_A
Probab=28.13 E-value=56 Score=22.25 Aligned_cols=52 Identities=17% Similarity=0.256 Sum_probs=34.6
Q ss_pred cchHHHHHHHHhhC------------CCCceEEe-cCCCcccCCccCCeEEEEeCCCCcEEcCCc
Q 035225 17 EIGAVAAATIKLQN------------PIVNPIIL-MLGTPVTREFRCDRVWVWVDAIGRVSKPPV 68 (70)
Q Consensus 17 ~~~~~A~~~I~~~~------------p~~~v~vl-~pg~~vT~df~~~RV~v~vD~~g~V~~vP~ 68 (70)
++.+||++.+++-. +.++..+- +-|..+..+|..+++.|+-+.-++++.-|.
T Consensus 114 ~tV~Ea~~~l~~~~i~~~~~~~~~~~~~~H~~i~D~sG~s~viE~~~g~l~i~~n~~~V~TN~P~ 178 (329)
T 2bjf_A 114 SSVEEVKEALKNANIVDIPISENIPNTTLHWMISDITGKSIVVEQTKEKLNVFDNNIGVLTNSPT 178 (329)
T ss_dssp SSHHHHHHHHTTEEEECCCSSTTCCCCCEEEEEECTTSCEEEEEECSSCEEEEECSSCEECSSSC
T ss_pred CCHHHHHHHHHhCceecccccCcCCCcceEEEEEcCCCCEEEEEEecCCcEEEeCCceEEcCCCC
Confidence 45667777665532 12222222 347888899999999999887788877664
No 27
>2km7_A Small protein A; BAME, SMPA, BAM complex, OMP85, YAET, cell membrane, cell OU membrane, lipoprotein, membrane, palmitate, membrane protei; NMR {Escherichia coli} PDB: 2kxx_A
Probab=28.04 E-value=33 Score=19.71 Aligned_cols=17 Identities=6% Similarity=0.054 Sum_probs=14.5
Q ss_pred CCeEEEEeCCCCcEEcC
Q 035225 50 CDRVWVWVDAIGRVSKP 66 (70)
Q Consensus 50 ~~RV~v~vD~~g~V~~v 66 (70)
..++.|+.|++|+|+++
T Consensus 69 ~~~l~V~Fd~~g~V~~i 85 (102)
T 2km7_A 69 QQTLTLTFNSSGVLTNI 85 (102)
T ss_dssp CCCEEEEEETTTEEEEE
T ss_pred EEEEEEEECCCCeEEEE
Confidence 46799999999999875
No 28
>2yka_B ORF57 protein, 52 kDa immediate-early phosphoprotein; RNA binding protein-transcription complex, RNA binding prote; NMR {Saimiriine herpesvirus 2}
Probab=32.47 E-value=14 Score=16.80 Aligned_cols=14 Identities=50% Similarity=0.942 Sum_probs=9.8
Q ss_pred CCCCCCCCCccccccc
Q 035225 2 ATFCSGKTSWPELVGE 17 (70)
Q Consensus 2 ~~~c~~k~~WpelVG~ 17 (70)
.++| |++|.+-|-.
T Consensus 4 gssc--r~nWs~RV~E 17 (26)
T 2yka_B 4 GSSC--KTSWADRVRE 17 (26)
Confidence 4677 8899876543
No 29
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=26.15 E-value=46 Score=23.47 Aligned_cols=26 Identities=19% Similarity=0.155 Sum_probs=19.2
Q ss_pred cchHHHHHHHHhhCCCCceEEecCCCcccC
Q 035225 17 EIGAVAAATIKLQNPIVNPIILMLGTPVTR 46 (70)
Q Consensus 17 ~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~ 46 (70)
++..+|.++|.+. ..+++.||+..|-
T Consensus 177 ~a~p~al~AI~~A----D~IvlgPGSlyTS 202 (341)
T 2p0y_A 177 QAVQPVIDAIMAA----DQIVLGPGSLFTS 202 (341)
T ss_dssp CCCHHHHHHHHHC----SEEEECSSCCCCC
T ss_pred CCCHHHHHHHHhC----CEEEECCCCCHHH
Confidence 3455677777764 5799999998873
No 30
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=25.10 E-value=31 Score=19.39 Aligned_cols=15 Identities=13% Similarity=0.202 Sum_probs=11.5
Q ss_pred eEEEEeCCCCcEEcC
Q 035225 52 RVWVWVDAIGRVSKP 66 (70)
Q Consensus 52 RV~v~vD~~g~V~~v 66 (70)
.|.+.+|.+|.|..+
T Consensus 43 ~v~f~I~~~G~v~~~ 57 (106)
T 2k9k_A 43 TLSFTIDTTGKAVDI 57 (106)
T ss_dssp EEEEEEETTTEEEEE
T ss_pred EEEEEECCCCcEEEE
Confidence 466778999988764
No 31
>3pjy_A Hypothetical signal peptide protein; DUF192 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Sinorhizobium meliloti}
Probab=25.07 E-value=29 Score=21.23 Aligned_cols=13 Identities=8% Similarity=0.291 Sum_probs=11.3
Q ss_pred EEEeCCCCcEEcC
Q 035225 54 WVWVDAIGRVSKP 66 (70)
Q Consensus 54 ~v~vD~~g~V~~v 66 (70)
-+|+|++|+|+.+
T Consensus 72 iiFld~~g~Vv~i 84 (136)
T 3pjy_A 72 MLFIASDGTIRTI 84 (136)
T ss_dssp EEEECTTSBEEEE
T ss_pred EEEECCCCEEEEE
Confidence 6799999999876
No 32
>3m7a_A Uncharacterized protein; structural genomics, unknown function, joint center for structural genomics, JCSG; HET: MSE; 1.22A {Novosphingobium aromaticivorans}
Probab=25.03 E-value=29 Score=21.43 Aligned_cols=13 Identities=23% Similarity=0.189 Sum_probs=11.1
Q ss_pred EEEeCCCCcEEcC
Q 035225 54 WVWVDAIGRVSKP 66 (70)
Q Consensus 54 ~v~vD~~g~V~~v 66 (70)
-+|+|++|+|+.+
T Consensus 86 iiFid~dg~Vv~i 98 (140)
T 3m7a_A 86 IIFVGLDRRVMNI 98 (140)
T ss_dssp EEEECTTSBEEEE
T ss_pred EEEECCCCeEEEE
Confidence 6789999999875
No 33
>3elg_A Uncharacterized periplasmic protein; BLIP-like fold, structural genomics, joint center for struct genomics, JCSG; HET: CIT; 1.64A {Bacteroides vulgatus atcc 8482} SCOP: d.98.2.1
Probab=23.76 E-value=1e+02 Score=18.14 Aligned_cols=42 Identities=14% Similarity=0.014 Sum_probs=28.7
Q ss_pred HHHHHhhCCCCceE-EecCCCcccCCccCCeEEEEeCCCCcEEc
Q 035225 23 AATIKLQNPIVNPI-ILMLGTPVTREFRCDRVWVWVDAIGRVSK 65 (70)
Q Consensus 23 ~~~I~~~~p~~~v~-vl~pg~~vT~df~~~RV~v~vD~~g~V~~ 65 (70)
...|++..|+..+. +=+....--.+.. +.+-|++|.+|.+..
T Consensus 83 ~~~i~~~yp~~~I~~iek~~~~YeVeL~-~~~el~fd~~G~~i~ 125 (128)
T 3elg_A 83 SKYMKANYNGHKTVKIERNRKGYELTLE-NGLEVDFDQFGGFLK 125 (128)
T ss_dssp HHHHHHHSTTCCEEEEEEETTEEEEEET-TSCEEEECTTSCEEE
T ss_pred HHHHHHHCCCCEEEEEEEeCCEEEEEEC-CCeEEEEeCCCCEEe
Confidence 56888999999876 4343333333333 458999999998765
No 34
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=22.83 E-value=48 Score=23.12 Aligned_cols=26 Identities=23% Similarity=0.121 Sum_probs=19.2
Q ss_pred cchHHHHHHHHhhCCCCceEEecCCCcccC
Q 035225 17 EIGAVAAATIKLQNPIVNPIILMLGTPVTR 46 (70)
Q Consensus 17 ~~~~~A~~~I~~~~p~~~v~vl~pg~~vT~ 46 (70)
++..+|.++|.+. ..+++.||+..|-
T Consensus 173 ~a~p~al~AI~~A----D~IvlgPGSl~TS 198 (326)
T 2q7x_A 173 LASRRVVQTILES----DMIVLGPGSLFTS 198 (326)
T ss_dssp CBCSHHHHHHHHC----SEEEECSSCCCCC
T ss_pred CCCHHHHHHHHhC----CEEEECCCCCHHH
Confidence 4445677778764 5789999998873
No 35
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=22.72 E-value=58 Score=22.80 Aligned_cols=23 Identities=17% Similarity=0.134 Sum_probs=17.6
Q ss_pred hHHHHHHHHhhCCCCceEEecCCCccc
Q 035225 19 GAVAAATIKLQNPIVNPIILMLGTPVT 45 (70)
Q Consensus 19 ~~~A~~~I~~~~p~~~v~vl~pg~~vT 45 (70)
..+|.++|.+. ..+++.||+..|
T Consensus 169 ~p~~l~AI~~A----D~IvlgPGS~~T 191 (323)
T 2o2z_A 169 LREGLEAIRKA----DVIVIGPGSLYT 191 (323)
T ss_dssp CHHHHHHHHHC----SEEEECSSCTTT
T ss_pred CHHHHHHHHhC----CEEEECCCCCHH
Confidence 45677777664 578999999887
No 36
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=22.28 E-value=60 Score=22.86 Aligned_cols=24 Identities=21% Similarity=0.153 Sum_probs=17.9
Q ss_pred hHHHHHHHHhhCCCCceEEecCCCcccC
Q 035225 19 GAVAAATIKLQNPIVNPIILMLGTPVTR 46 (70)
Q Consensus 19 ~~~A~~~I~~~~p~~~v~vl~pg~~vT~ 46 (70)
..+|.++|.+. ..+++.||+..|-
T Consensus 168 ~p~~l~AI~~A----D~IvlgPGS~~TS 191 (332)
T 2ppv_A 168 MNEAIEALEQA----DLIVLGPGSLYTS 191 (332)
T ss_dssp CHHHHHHHHHC----SEEEECSSCCCCC
T ss_pred CHHHHHHHHhC----CEEEECCCCCHHH
Confidence 45677777664 5789999998873
No 37
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=22.01 E-value=59 Score=18.22 Aligned_cols=27 Identities=19% Similarity=0.019 Sum_probs=14.7
Q ss_pred cCCCcccCCc-cCCeEEEEeCCCCcEEc
Q 035225 39 MLGTPVTREF-RCDRVWVWVDAIGRVSK 65 (70)
Q Consensus 39 ~pg~~vT~df-~~~RV~v~vD~~g~V~~ 65 (70)
++|...+..+ ....+-|+-+++|.+..
T Consensus 12 ~~g~~~~~~~~~g~~v~v~r~~~g~~~A 39 (111)
T 1vm9_A 12 WVGEMETFETSDGTEVLIVNSEEHGVKA 39 (111)
T ss_dssp CTTCEEEEECTTCCEEEEEEETTTEEEE
T ss_pred CCCCeEEEEEcCCCEEEEEEeCCCeEEE
Confidence 4455555455 45566666665665543
No 38
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=21.96 E-value=30 Score=19.63 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=16.1
Q ss_pred cccCCccCC-------eEEEEeCCCCcEE
Q 035225 43 PVTREFRCD-------RVWVWVDAIGRVS 64 (70)
Q Consensus 43 ~vT~df~~~-------RV~v~vD~~g~V~ 64 (70)
-++..|++. ||.+.+|++|.+.
T Consensus 27 ~~~k~FCp~CGn~TL~Rvsvsvd~~G~~~ 55 (79)
T 2con_A 27 DMNRVFCGHCGNKTLKKVSVTINDDGTLH 55 (79)
T ss_dssp CSSCCSCSSSCCSCCEEEECBCCSSCCCB
T ss_pred CcccccccccCcccceEEEEEECCCCcEE
Confidence 345566664 9999999998754
No 39
>1yr1_A Divib, FTSQ, cell-division initiation protein; divisome, cell cycle; NMR {Geobacillus stearothermophilus} PDB: 2alj_A
Probab=20.66 E-value=81 Score=18.38 Aligned_cols=54 Identities=24% Similarity=0.067 Sum_probs=28.8
Q ss_pred cccccccchHHHHHHHHhhCCCCceEE---ecCCCcccCCccCCeEEEEeCCCCcEE
Q 035225 11 WPELVGEIGAVAAATIKLQNPIVNPII---LMLGTPVTREFRCDRVWVWVDAIGRVS 64 (70)
Q Consensus 11 WpelVG~~~~~A~~~I~~~~p~~~v~v---l~pg~~vT~df~~~RV~v~vD~~g~V~ 64 (70)
-|-++|.+..+......++...+.-.+ +..=..-+...+++|+.|+.++...|.
T Consensus 38 ~Pi~~gf~~~~~l~~~~k~l~~lp~~i~~~IseI~~~p~~~~~~~i~L~M~DGn~V~ 94 (119)
T 1yr1_A 38 APVLVGWKDGDAIAEMTGQLAELPAAVLGAMSEIHYKPTREYEDRVIVYMNDGYEVS 94 (119)
T ss_dssp SCCEESCCCHHHHHHHHHHHHHSCHHHHHSCSEEEECCCSSCTTEEEEECTTSCEEE
T ss_pred CceecCCCChHHHHHHHHHHHhCCHHHHhcccEEEcCCCCCCCCeEEEEEcCCcEEE
Confidence 588899887664432222221111111 111112234566899999998777654
No 40
>2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3
Probab=20.07 E-value=35 Score=19.30 Aligned_cols=23 Identities=13% Similarity=0.030 Sum_probs=11.6
Q ss_pred cCCCcccCCccCCeEEEEeCCCC
Q 035225 39 MLGTPVTREFRCDRVWVWVDAIG 61 (70)
Q Consensus 39 ~pg~~vT~df~~~RV~v~vD~~g 61 (70)
++|+..+.++....+-|+-+++|
T Consensus 17 ~~g~~~~~~~~g~~i~v~r~~~g 39 (113)
T 2jo6_A 17 LPETGVCALLGDEQVAIFRPYHS 39 (113)
T ss_dssp CTTEEEEEEETTEEEEEEECSSS
T ss_pred CCCCeEEEEECCEEEEEEEECCC
Confidence 34444444444455666655455
Done!