Your job contains 1 sequence.
>035240
MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIGFVVMGFVGFFVKLIFIP
INNIIVGSG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035240
(69 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2117393 - symbol:AT4G24920 species:3702 "Arabi... 251 1.9e-21 1
TAIR|locus:2159692 - symbol:AT5G50460 species:3702 "Arabi... 251 1.9e-21 1
TAIR|locus:2114530 - symbol:AT3G48570 species:3702 "Arabi... 235 9.2e-20 1
UNIPROTKB|Q7Z1B8 - symbol:SEC61G "Protein transport prote... 187 1.1e-14 1
UNIPROTKB|Q962X7 - symbol:SEC61G "Protein transport prote... 186 1.4e-14 1
UNIPROTKB|Q66KU2 - symbol:sec61g "Protein transport prote... 185 1.8e-14 1
FB|FBgn0033691 - symbol:CG8860 species:7227 "Drosophila m... 183 3.0e-14 1
UNIPROTKB|C1BHY7 - symbol:SC61G "Transport protein SEC61 ... 183 3.0e-14 1
UNIPROTKB|C1BWY8 - symbol:SC61G "Transport protein Sec61 ... 183 3.0e-14 1
UNIPROTKB|Q7SZU9 - symbol:sec61g "Protein transport prote... 182 3.8e-14 1
UNIPROTKB|Q7T207 - symbol:sec61g "Protein transport prote... 182 3.8e-14 1
FB|FBgn0031049 - symbol:Sec61gamma "Sec61gamma" species:7... 181 4.9e-14 1
UNIPROTKB|E1BUS9 - symbol:SEC61G "Uncharacterized protein... 181 4.9e-14 1
UNIPROTKB|Q3T104 - symbol:SEC61G "Protein transport prote... 181 4.9e-14 1
UNIPROTKB|P60058 - symbol:SEC61G "Protein transport prote... 181 4.9e-14 1
UNIPROTKB|P60059 - symbol:SEC61G "Protein transport prote... 181 4.9e-14 1
UNIPROTKB|F2Z5D9 - symbol:SEC61G "Uncharacterized protein... 181 4.9e-14 1
UNIPROTKB|B9ENP9 - symbol:SC61G "Transport protein Sec61 ... 181 4.9e-14 1
RGD|1596170 - symbol:Sec61g "SEC61, gamma subunit" specie... 181 4.9e-14 1
RGD|2323401 - symbol:LOC100363239 "Sec61 gamma subunit-li... 181 4.9e-14 1
ZFIN|ZDB-GENE-040718-203 - symbol:sec61g "Sec61 gamma sub... 181 4.9e-14 1
WB|WBGene00001303 - symbol:emo-1 species:6239 "Caenorhabd... 179 7.9e-14 1
DICTYBASE|DDB_G0287777 - symbol:sec61g "protein transport... 164 3.1e-12 1
RGD|2322543 - symbol:LOC100360207 "Sec61 gamma subunit-li... 152 5.8e-11 1
RGD|1306317 - symbol:Sec61g-ps1 "Sec61 gamma subunit, pse... 147 2.0e-10 1
RGD|2301013 - symbol:Sec61gl "SEC61 gamma subunit-like" s... 147 2.0e-10 1
GENEDB_PFALCIPARUM|PFB0450w - symbol:PFB0450w "Sec61-gamm... 132 7.6e-09 1
UNIPROTKB|O96183 - symbol:PFB0450w "Sec61 gamma subunit, ... 132 7.6e-09 1
RGD|2324557 - symbol:LOC100362376 "LRRGT00025-like" speci... 120 1.4e-07 1
RGD|1559542 - symbol:LOC499136 "LRRGT00021" species:10116... 122 1.7e-07 1
POMBASE|SPAC4G8.02c - symbol:sss1 "translocon gamma subun... 119 1.8e-07 1
FB|FBgn0034510 - symbol:CG13426 species:7227 "Drosophila ... 117 2.9e-07 1
ASPGD|ASPL0000076019 - symbol:AN4589 species:162425 "Emer... 104 7.0e-06 1
SGD|S000002493 - symbol:SSS1 "Subunit of the Sec61p trans... 90 0.00021 1
>TAIR|locus:2117393 [details] [associations]
symbol:AT4G24920 species:3702 "Arabidopsis thaliana"
[GO:0006605 "protein targeting" evidence=IEA;ISS] [GO:0006886
"intracellular protein transport" evidence=IEA;ISS] [GO:0015031
"protein transport" evidence=IEA] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0009627 "systemic acquired resistance" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 GO:GO:0016021 GO:GO:0006605 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005789 EMBL:AL161562 EMBL:AL035523
GO:GO:0015450 EMBL:AY099662 EMBL:AY128850 IPI:IPI00538857
PIR:T05513 RefSeq:NP_194222.1 RefSeq:NP_568728.1 UniGene:At.23349
UniGene:At.32310 UniGene:At.49155 ProteinModelPortal:P0DI74
GeneID:828594 GeneID:835114 KEGG:ath:AT4G24920 KEGG:ath:AT5G50460
TAIR:At4g24920 eggNOG:NOG302441 HOGENOM:HOG000194479 KO:K07342
PhylomeDB:P0DI74 GermOnline:AT4G24920 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
Uniprot:P0DI74
Length = 69
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 51/68 (75%), Positives = 54/68 (79%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MDAID+V DPLRDFAKDS+RLVKRCHKPDRKEFTKVA RTAI KLIFIP
Sbjct: 1 MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
Query: 61 INNIIVGS 68
INNIIVG+
Sbjct: 61 INNIIVGA 68
>TAIR|locus:2159692 [details] [associations]
symbol:AT5G50460 species:3702 "Arabidopsis thaliana"
[GO:0006605 "protein targeting" evidence=IEA;ISS] [GO:0006886
"intracellular protein transport" evidence=IEA;ISS] [GO:0015031
"protein transport" evidence=IEA] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 GO:GO:0016021 GO:GO:0006605 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005789 EMBL:AL161562 EMBL:AL035523
GO:GO:0015450 EMBL:AY099662 EMBL:AY128850 IPI:IPI00538857
PIR:T05513 RefSeq:NP_194222.1 RefSeq:NP_568728.1 UniGene:At.23349
UniGene:At.32310 UniGene:At.49155 ProteinModelPortal:P0DI74
GeneID:828594 GeneID:835114 KEGG:ath:AT4G24920 KEGG:ath:AT5G50460
TAIR:At4g24920 eggNOG:NOG302441 HOGENOM:HOG000194479 KO:K07342
PhylomeDB:P0DI74 GermOnline:AT4G24920 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
Uniprot:P0DI74
Length = 69
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 51/68 (75%), Positives = 54/68 (79%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MDAID+V DPLRDFAKDS+RLVKRCHKPDRKEFTKVA RTAI KLIFIP
Sbjct: 1 MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
Query: 61 INNIIVGS 68
INNIIVG+
Sbjct: 61 INNIIVGA 68
>TAIR|locus:2114530 [details] [associations]
symbol:AT3G48570 species:3702 "Arabidopsis thaliana"
[GO:0006605 "protein targeting" evidence=IEA;ISS] [GO:0006886
"intracellular protein transport" evidence=IEA;ISS] [GO:0015031
"protein transport" evidence=IEA] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0015824 "proline transport"
evidence=RCA] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 GO:GO:0016021 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006605 GO:GO:0005789 EMBL:AL133315
GO:GO:0015450 HOGENOM:HOG000194479 KO:K07342 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
EMBL:AK118355 EMBL:AY085342 IPI:IPI00517493 PIR:T46201
RefSeq:NP_566909.1 UniGene:At.48753 ProteinModelPortal:Q9SMP2
SMR:Q9SMP2 STRING:Q9SMP2 PaxDb:Q9SMP2 PRIDE:Q9SMP2
EnsemblPlants:AT3G48570.1 GeneID:824017 KEGG:ath:AT3G48570
TAIR:At3g48570 eggNOG:NOG263311 InParanoid:Q9SMP2 OMA:IDPLRDF
PhylomeDB:Q9SMP2 ProtClustDB:CLSN2685630 Genevestigator:Q9SMP2
GermOnline:AT3G48570 Uniprot:Q9SMP2
Length = 69
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 47/68 (69%), Positives = 52/68 (76%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
M+AID+ DPLRDFAK S+RLV+RCHKPDRKEFTKVA RTAI KL+FIP
Sbjct: 1 MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60
Query: 61 INNIIVGS 68
INNIIVGS
Sbjct: 61 INNIIVGS 68
>UNIPROTKB|Q7Z1B8 [details] [associations]
symbol:SEC61G "Protein transport protein Sec61 subunit
gamma" species:213494 "Gryllotalpa orientalis" [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0045047 "protein targeting
to ER" evidence=ISS] InterPro:IPR001901 InterPro:IPR008158
Pfam:PF00584 PROSITE:PS01067 GO:GO:0016021 GO:GO:0005789
GO:GO:0008565 GO:GO:0045047 GO:GO:0015450 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
EMBL:AF540908 ProteinModelPortal:Q7Z1B8 Uniprot:Q7Z1B8
Length = 68
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 40/68 (58%), Positives = 44/68 (64%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R FAKDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIGFFVKLIHIP 60
Query: 61 INNIIVGS 68
INNIIVGS
Sbjct: 61 INNIIVGS 68
>UNIPROTKB|Q962X7 [details] [associations]
symbol:SEC61G "Protein transport protein Sec61 subunit
gamma" species:7741 "Branchiostoma belcheri" [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0045047 "protein targeting
to ER" evidence=ISS] InterPro:IPR001901 InterPro:IPR008158
Pfam:PF00584 PROSITE:PS01067 GO:GO:0016021 GO:GO:0005789
GO:GO:0008565 GO:GO:0045047 GO:GO:0015450 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
HOVERGEN:HBG058067 EMBL:AF395915 ProteinModelPortal:Q962X7
Uniprot:Q962X7
Length = 68
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 40/68 (58%), Positives = 43/68 (63%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R FAKDS RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQLVQFVEPARQFAKDSYRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVGS 68
INNIIVGS
Sbjct: 61 INNIIVGS 68
>UNIPROTKB|Q66KU2 [details] [associations]
symbol:sec61g "Protein transport protein Sec61 subunit
gamma" species:8355 "Xenopus laevis" [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0045047 "protein targeting
to ER" evidence=ISS] InterPro:IPR001901 InterPro:IPR008158
Pfam:PF00584 PROSITE:PS01067 GO:GO:0016021 GO:GO:0005789
GO:GO:0008565 GO:GO:0045047 GO:GO:0015450 KO:K07342
Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 HOVERGEN:HBG058067 EMBL:BC078558
RefSeq:NP_001165129.1 RefSeq:NP_001165130.1 UniGene:Xl.7125
UniGene:Xl.76252 ProteinModelPortal:Q66KU2 GeneID:100329133
GeneID:394424 KEGG:xla:100329133 KEGG:xla:394424 CTD:100329133
CTD:394424 Xenbase:XB-GENE-865051 Uniprot:Q66KU2
Length = 68
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 39/68 (57%), Positives = 43/68 (63%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVGS 68
INNIIVGS
Sbjct: 61 INNIIVGS 68
>FB|FBgn0033691 [details] [associations]
symbol:CG8860 species:7227 "Drosophila melanogaster"
[GO:0005784 "Sec61 translocon complex" evidence=ISS] [GO:0008565
"protein transporter activity" evidence=ISS] [GO:0006616
"SRP-dependent cotranslational protein targeting to membrane,
translocation" evidence=ISS] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISS] [GO:0015031 "protein transport"
evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001901 InterPro:IPR008158
Pfam:PF00584 PROSITE:PS01067 EMBL:AE013599 GO:GO:0016021
GO:GO:0006605 GO:GO:0022008 GO:GO:0005789 GO:GO:0015450 KO:K07342
Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 EMBL:AY118846 RefSeq:NP_610738.1
UniGene:Dm.20651 ProteinModelPortal:Q9V668 SMR:Q9V668
MINT:MINT-784792 STRING:Q9V668 PRIDE:Q9V668
EnsemblMetazoa:FBtr0088011 GeneID:36310 KEGG:dme:Dmel_CG8860
UCSC:CG8860-RA FlyBase:FBgn0033691 eggNOG:COG2443
GeneTree:ENSGT00390000001319 InParanoid:Q9V668 OMA:KQFAKDS
OrthoDB:EOG479CQW PhylomeDB:Q9V668 GenomeRNAi:36310 NextBio:797863
Bgee:Q9V668 GermOnline:CG8860 Uniprot:Q9V668
Length = 68
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 39/68 (57%), Positives = 44/68 (64%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R FAKDS+RLVKRC KPDRKEF K+A TA+ KLI IP
Sbjct: 1 MDKVVKFAEPGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVGS 68
INNIIVGS
Sbjct: 61 INNIIVGS 68
>UNIPROTKB|C1BHY7 [details] [associations]
symbol:SC61G "Transport protein SEC61 subunit gamma"
species:8022 "Oncorhynchus mykiss" [GO:0008565 "protein transporter
activity" evidence=ISS] [GO:0045047 "protein targeting to ER"
evidence=ISS] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 GO:GO:0016020 GO:GO:0008565 GO:GO:0005622
GO:GO:0045047 GO:GO:0015450 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 EMBL:BT074216 UniGene:Omy.10075
ProteinModelPortal:C1BHY7 Uniprot:C1BHY7
Length = 68
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 38/67 (56%), Positives = 43/67 (64%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF+K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFSKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>UNIPROTKB|C1BWY8 [details] [associations]
symbol:SC61G "Transport protein Sec61 subunit gamma"
species:8010 "Esox lucius" [GO:0008565 "protein transporter
activity" evidence=ISS] [GO:0045047 "protein targeting to ER"
evidence=ISS] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 GO:GO:0016020 GO:GO:0008565 GO:GO:0005622
GO:GO:0045047 GO:GO:0015450 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 EMBL:BT079117
ProteinModelPortal:C1BWY8 Uniprot:C1BWY8
Length = 68
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 38/67 (56%), Positives = 43/67 (64%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF+K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFSKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>UNIPROTKB|Q7SZU9 [details] [associations]
symbol:sec61g "Protein transport protein Sec61 subunit
gamma" species:8049 "Gadus morhua" [GO:0008565 "protein transporter
activity" evidence=ISS] [GO:0045047 "protein targeting to ER"
evidence=ISS] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 GO:GO:0016021 GO:GO:0005789 GO:GO:0008565
GO:GO:0045047 GO:GO:0015450 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 GeneTree:ENSGT00390000001319
OMA:TEVPVEF HOVERGEN:HBG058067 EMBL:AY281321
ProteinModelPortal:Q7SZU9 Ensembl:ENSGMOT00000002316 Uniprot:Q7SZU9
Length = 68
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 39/67 (58%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD I +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQIMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>UNIPROTKB|Q7T207 [details] [associations]
symbol:sec61g "Protein transport protein Sec61 subunit
gamma" species:43256 "Harpagifer antarcticus" [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0045047 "protein targeting
to ER" evidence=ISS] InterPro:IPR001901 InterPro:IPR008158
Pfam:PF00584 PROSITE:PS01067 GO:GO:0016021 GO:GO:0005789
GO:GO:0008565 GO:GO:0045047 GO:GO:0015450 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
HOVERGEN:HBG058067 EMBL:AY258259 ProteinModelPortal:Q7T207
Uniprot:Q7T207
Length = 68
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 39/67 (58%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF KVA TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKVAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>FB|FBgn0031049 [details] [associations]
symbol:Sec61gamma "Sec61gamma" species:7227 "Drosophila
melanogaster" [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0005784 "Sec61 translocon complex" evidence=ISS]
[GO:0006616 "SRP-dependent cotranslational protein targeting to
membrane, translocation" evidence=ISS] [GO:0015031 "protein
transport" evidence=ISS] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0010507 "negative regulation of
autophagy" evidence=IMP] InterPro:IPR001901 InterPro:IPR008158
Pfam:PF00584 PROSITE:PS01067 GO:GO:0016021 GO:GO:0006605
GO:GO:0005789 GO:GO:0010507 EMBL:AE014298 GO:GO:0015450 KO:K07342
Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 eggNOG:COG2443 GeneTree:ENSGT00390000001319
OrthoDB:EOG479CQW EMBL:AY070594 RefSeq:NP_608337.1 UniGene:Dm.6361
ProteinModelPortal:Q9VWE9 SMR:Q9VWE9 STRING:Q9VWE9 PRIDE:Q9VWE9
EnsemblMetazoa:FBtr0074745 GeneID:32968 KEGG:dme:Dmel_CG14214
UCSC:CG14214-RA CTD:32968 FlyBase:FBgn0031049 InParanoid:Q9VWE9
OMA:TEVPVEF PhylomeDB:Q9VWE9 GenomeRNAi:32968 NextBio:781283
Bgee:Q9VWE9 GermOnline:CG14214 Uniprot:Q9VWE9
Length = 68
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 39/68 (57%), Positives = 44/68 (64%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R FAKDS+RLVKRC KPDRKEF K+A TA+ KLI IP
Sbjct: 1 MDKVVKFAEPGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFCIMGFIGFFVKLIHIP 60
Query: 61 INNIIVGS 68
INNIIVGS
Sbjct: 61 INNIIVGS 68
>UNIPROTKB|E1BUS9 [details] [associations]
symbol:SEC61G "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006605 "protein targeting" evidence=IEA]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 GO:GO:0006605 GO:GO:0016020 GO:GO:0005622
GO:GO:0015450 Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 GeneTree:ENSGT00390000001319 OMA:KQFAKDS
EMBL:AADN02001497 IPI:IPI00597595 ProteinModelPortal:E1BUS9
SMR:E1BUS9 PRIDE:E1BUS9 Ensembl:ENSGALT00000021398 NextBio:20923260
Uniprot:E1BUS9
Length = 68
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>UNIPROTKB|Q3T104 [details] [associations]
symbol:SEC61G "Protein transport protein Sec61 subunit
gamma" species:9913 "Bos taurus" [GO:0008565 "protein transporter
activity" evidence=ISS] [GO:0045047 "protein targeting to ER"
evidence=ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA] InterPro:IPR001901
InterPro:IPR008158 Pfam:PF00584 PROSITE:PS01067 GO:GO:0016021
GO:GO:0005789 GO:GO:0008565 GO:GO:0045047 GO:GO:0015450
eggNOG:NOG302441 HOGENOM:HOG000194479 KO:K07342 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
GeneTree:ENSGT00390000001319 OMA:KQFAKDS EMBL:BC102186
IPI:IPI00718085 RefSeq:NP_001035676.1 UniGene:Bt.6300
ProteinModelPortal:Q3T104 SMR:Q3T104 STRING:Q3T104 PRIDE:Q3T104
Ensembl:ENSBTAT00000019929 GeneID:615778 KEGG:bta:615778 CTD:23480
HOVERGEN:HBG058067 InParanoid:Q3T104 OrthoDB:EOG40GCSH
NextBio:20899781 Uniprot:Q3T104
Length = 68
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>UNIPROTKB|P60058 [details] [associations]
symbol:SEC61G "Protein transport protein Sec61 subunit
gamma" species:9615 "Canis lupus familiaris" [GO:0005789
"endoplasmic reticulum membrane" evidence=NAS;TAS] [GO:0008565
"protein transporter activity" evidence=IGI] [GO:0045047 "protein
targeting to ER" evidence=IGI] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=NAS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=NAS] [GO:0006886 "intracellular protein
transport" evidence=NAS] Reactome:REACT_93968 InterPro:IPR001901
InterPro:IPR008158 Pfam:PF00584 PROSITE:PS01067 GO:GO:0030176
Reactome:REACT_103209 GO:GO:0045047 GO:GO:0015450 PDB:2WWB
PDBsum:2WWB eggNOG:NOG302441 HOGENOM:HOG000194479 KO:K07342
Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 GeneTree:ENSGT00390000001319 OMA:KQFAKDS
CTD:23480 HOVERGEN:HBG058067 OrthoDB:EOG40GCSH EMBL:L25086
RefSeq:NP_001003325.1 UniGene:Cfa.40294 DisProt:DP00117
ProteinModelPortal:P60058 SMR:P60058 STRING:P60058 PRIDE:P60058
Ensembl:ENSCAFT00000005555 GeneID:404017 KEGG:cfa:404017
InParanoid:P60058 EvolutionaryTrace:P60058 NextBio:20817504
Uniprot:P60058
Length = 68
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>UNIPROTKB|P60059 [details] [associations]
symbol:SEC61G "Protein transport protein Sec61 subunit
gamma" species:9606 "Homo sapiens" [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0006412 "translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0042590 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_17015
InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584 PROSITE:PS01067
GO:GO:0016021 Reactome:REACT_6900 GO:GO:0002479 GO:GO:0005789
GO:GO:0006412 GO:GO:0008565 TCDB:3.A.5.9.1 GO:GO:0006614
EMBL:CH471201 GO:GO:0015450 eggNOG:NOG302441 HOGENOM:HOG000194479
KO:K07342 Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 OMA:KQFAKDS CTD:23480 HOVERGEN:HBG058067
OrthoDB:EOG40GCSH EMBL:AF054184 EMBL:CR456979 EMBL:AK311845
EMBL:BC009480 EMBL:BC051840 IPI:IPI00006072 PIR:S42412
RefSeq:NP_001012474.1 RefSeq:NP_055117.1 UniGene:Hs.488282
ProteinModelPortal:P60059 SMR:P60059 STRING:P60059 DMDM:38503386
PRIDE:P60059 DNASU:23480 Ensembl:ENST00000352861
Ensembl:ENST00000395535 Ensembl:ENST00000415949
Ensembl:ENST00000450622 GeneID:23480 KEGG:hsa:23480 UCSC:uc003tqf.3
GeneCards:GC07M054787 HGNC:HGNC:18277 HPA:HPA053196 MIM:609215
neXtProt:NX_P60059 PharmGKB:PA134939045 InParanoid:P60059
PhylomeDB:P60059 GenomeRNAi:23480 NextBio:45833 Bgee:P60059
CleanEx:HS_SEC61G Genevestigator:P60059 GermOnline:ENSG00000132432
Uniprot:P60059
Length = 68
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>UNIPROTKB|F2Z5D9 [details] [associations]
symbol:SEC61G "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 GO:GO:0006605 GO:GO:0016020 GO:GO:0005622
GO:GO:0015450 KO:K07342 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 GeneTree:ENSGT00390000001319
OMA:KQFAKDS EMBL:FP016192 RefSeq:XP_003130491.1
ProteinModelPortal:F2Z5D9 SMR:F2Z5D9 PRIDE:F2Z5D9
Ensembl:ENSSSCT00000017033 GeneID:100517415 KEGG:ssc:100517415
Uniprot:F2Z5D9
Length = 68
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>UNIPROTKB|B9ENP9 [details] [associations]
symbol:SC61G "Transport protein Sec61 subunit gamma"
species:8030 "Salmo salar" [GO:0008565 "protein transporter
activity" evidence=ISS] [GO:0045047 "protein targeting to ER"
evidence=ISS] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 GO:GO:0016020 GO:GO:0008565 GO:GO:0005622
GO:GO:0045047 GO:GO:0015450 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 HOVERGEN:HBG058067
EMBL:BT057274 ProteinModelPortal:B9ENP9 SMR:B9ENP9 PRIDE:B9ENP9
Uniprot:B9ENP9
Length = 68
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>RGD|1596170 [details] [associations]
symbol:Sec61g "SEC61, gamma subunit" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001901
InterPro:IPR008158 Pfam:PF00584 PROSITE:PS01067 RGD:1596170
GO:GO:0006605 GO:GO:0016020 GO:GO:0005622 GO:GO:0015450
eggNOG:NOG302441 KO:K07342 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 CTD:23480 HOVERGEN:HBG058067
OrthoDB:EOG40GCSH EMBL:CH473996 EMBL:BC168720 EMBL:BC168779
IPI:IPI00914197 RefSeq:NP_001128492.1 UniGene:Rn.1965 SMR:B5DEL7
STRING:B5DEL7 GeneID:689134 KEGG:rno:689134 UCSC:RGD:1596170
NextBio:738019 Genevestigator:B5DEL7 Uniprot:B5DEL7
Length = 68
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>RGD|2323401 [details] [associations]
symbol:LOC100363239 "Sec61 gamma subunit-like" species:10116
"Rattus norvegicus" [GO:0006605 "protein targeting" evidence=IEA]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 RGD:2323401 GO:GO:0006605 GO:GO:0016020
GO:GO:0005622 GO:GO:0015450 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 GeneTree:ENSGT00390000001319
IPI:IPI00914197 Ensembl:ENSRNOT00000006906 ArrayExpress:F1LPB2
Uniprot:F1LPB2
Length = 92
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 25 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 84
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 85 INNIIVG 91
>ZFIN|ZDB-GENE-040718-203 [details] [associations]
symbol:sec61g "Sec61 gamma subunit" species:7955
"Danio rerio" [GO:0006605 "protein targeting" evidence=IEA]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584 PROSITE:PS01067
ZFIN:ZDB-GENE-040718-203 GO:GO:0006605 GO:GO:0016020 GO:GO:0005622
GO:GO:0015450 KO:K07342 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 GeneTree:ENSGT00390000001319
CTD:23480 EMBL:BX927064 IPI:IPI00773039 RefSeq:NP_001002499.2
UniGene:Dr.12512 ProteinModelPortal:F2Z4R1 SMR:F2Z4R1 PRIDE:F2Z4R1
Ensembl:ENSDART00000144203 GeneID:436772 KEGG:dre:436772
NextBio:20831208 ArrayExpress:F2Z4R1 Bgee:F2Z4R1 Uniprot:F2Z4R1
Length = 68
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F KDS+RLVKRC KPDRKEF K+A TAI KLI IP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>WB|WBGene00001303 [details] [associations]
symbol:emo-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;TAS]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA;ISS] [GO:0006605 "protein
targeting" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0001555 "oocyte growth" evidence=IMP] [GO:0030728 "ovulation"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] InterPro:IPR001901
InterPro:IPR008158 Pfam:PF00584 PROSITE:PS01067 GO:GO:0016021
GO:GO:0009792 GO:GO:0006605 GO:GO:0006886 GO:GO:0002119
GO:GO:0005789 GO:GO:0030728 GO:GO:0018996 GO:GO:0005623
GO:GO:0001555 GO:GO:0015450 eggNOG:NOG302441 HOGENOM:HOG000194479
KO:K07342 Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 GeneTree:ENSGT00390000001319 OMA:KQFAKDS
EMBL:U53785 EMBL:Z74031 PIR:T21656 RefSeq:NP_505778.1
ProteinModelPortal:Q19967 SMR:Q19967 STRING:Q19967 PaxDb:Q19967
EnsemblMetazoa:F32D8.6 GeneID:179510 KEGG:cel:CELE_F32D8.6
UCSC:F32D8.6.1 CTD:179510 WormBase:F32D8.6 InParanoid:Q19967
NextBio:905718 GermOnline:F32D8.6 Uniprot:Q19967
Length = 68
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 37/68 (54%), Positives = 43/68 (63%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F+KDS RLVKRC KPDRKE+ K+A TAI KLI IP
Sbjct: 1 MDQFQALIEPARQFSKDSYRLVKRCTKPDRKEYQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVGS 68
INNIIVG+
Sbjct: 61 INNIIVGA 68
>DICTYBASE|DDB_G0287777 [details] [associations]
symbol:sec61g "protein transport protein SEC61 gamma
subunit" species:44689 "Dictyostelium discoideum" [GO:0016020
"membrane" evidence=IEA] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006605
"protein targeting" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001901
InterPro:IPR008158 Pfam:PF00584 PROSITE:PS01067
dictyBase:DDB_G0287777 GO:GO:0016021 GO:GO:0006605 GO:GO:0005789
GenomeReviews:CM000154_GR EMBL:AAFI02000104 GO:GO:0015450
eggNOG:NOG302441 KO:K07342 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 OMA:TEVPVEF RefSeq:XP_637046.1
ProteinModelPortal:Q54JV6 STRING:Q54JV6 EnsemblProtists:DDB0235195
GeneID:8626300 KEGG:ddi:DDB_G0287777 ProtClustDB:CLSZ2429958
Uniprot:Q54JV6
Length = 69
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 33/67 (49%), Positives = 42/67 (62%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD ++ PL+DFAK+S+RL K+C KPD +EF K+A T I KLI IP
Sbjct: 1 MDILEETAAPLKDFAKNSIRLFKKCTKPDAQEFQKIALATLIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNI+VG
Sbjct: 61 INNILVG 67
>RGD|2322543 [details] [associations]
symbol:LOC100360207 "Sec61 gamma subunit-like" species:10116
"Rattus norvegicus" [GO:0006605 "protein targeting" evidence=IEA]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
RGD:2322543 GO:GO:0006605 GO:GO:0016020 GO:GO:0005622 GO:GO:0015450
Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 OrthoDB:EOG40GCSH IPI:IPI00949061
Ensembl:ENSRNOT00000033705 UCSC:RGD:2322543 Uniprot:D4AA45
Length = 68
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 34/67 (50%), Positives = 39/67 (58%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + +P R F K S+ LVK C KPDRK+F K+A TAI KLI IP
Sbjct: 1 MDQVMLFVEPSRQFVKASILLVKGCSKPDRKKFQKIAVATAIGFAIMGFIGFFVKLIHIP 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>RGD|1306317 [details] [associations]
symbol:Sec61g-ps1 "Sec61 gamma subunit, pseudogene 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006605 "protein targeting" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584 RGD:1306317
RGD:2301013 Pfam:PF03634 GO:GO:0006605 GO:GO:0016020 GO:GO:0005622
InterPro:IPR005333 GO:GO:0015450 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
HOVERGEN:HBG058067 OrthoDB:EOG40GCSH EMBL:AY318964 IPI:IPI00758427
STRING:Q7TQ10 Ensembl:ENSRNOT00000043104 InParanoid:Q7TQ10
NextBio:20795539 Genevestigator:Q7TQ10 Uniprot:Q7TQ10
Length = 135
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 31/57 (54%), Positives = 36/57 (63%)
Query: 9 DPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNII 65
+P R F KDS++LVKRC +P RKEF K+A TAI KLI IPINNII
Sbjct: 5 EPSRQFVKDSIQLVKRCTEPARKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNII 61
>RGD|2301013 [details] [associations]
symbol:Sec61gl "SEC61 gamma subunit-like" species:10116 "Rattus
norvegicus" [GO:0006605 "protein targeting" evidence=IEA]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
RGD:1306317 RGD:2301013 Pfam:PF03634 GO:GO:0006605 GO:GO:0016020
GO:GO:0005622 InterPro:IPR005333 GO:GO:0015450 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
HOVERGEN:HBG058067 OrthoDB:EOG40GCSH EMBL:AY318964 IPI:IPI00758427
STRING:Q7TQ10 Ensembl:ENSRNOT00000043104 InParanoid:Q7TQ10
NextBio:20795539 Genevestigator:Q7TQ10 Uniprot:Q7TQ10
Length = 135
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 31/57 (54%), Positives = 36/57 (63%)
Query: 9 DPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNII 65
+P R F KDS++LVKRC +P RKEF K+A TAI KLI IPINNII
Sbjct: 5 EPSRQFVKDSIQLVKRCTEPARKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNII 61
>GENEDB_PFALCIPARUM|PFB0450w [details] [associations]
symbol:PFB0450w "Sec61-gamma subunit of protein
translocation complex, putative" species:5833 "Plasmodium
falciparum" [GO:0006616 "SRP-dependent cotranslational protein
targeting to membrane, translocation" evidence=ISS]
InterPro:IPR001901 InterPro:IPR008158 InterPro:IPR027184
Pfam:PF00584 GO:GO:0016020 GO:GO:0005622 EMBL:AE001362
GO:GO:0006616 GO:GO:0015450 HOGENOM:HOG000194479 KO:K07342
Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 OMA:TEVPVEF PANTHER:PTHR12309:SF5 PIR:H71614
RefSeq:XP_001349608.1 ProteinModelPortal:O96183
EnsemblProtists:PFB0450w:mRNA GeneID:812690 KEGG:pfa:PFB0450w
EuPathDB:PlasmoDB:PF3D7_0210000 ProtClustDB:PTZ00478 Uniprot:O96183
Length = 81
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 11 LRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 68
++ F +DS+RL+++C KP++KE+T + + + KL+FIPINNI VGS
Sbjct: 23 IQTFVEDSVRLIRKCTKPNKKEYTNIVYACSFGFLIMGFIGYIIKLVFIPINNIFVGS 80
>UNIPROTKB|O96183 [details] [associations]
symbol:PFB0450w "Sec61 gamma subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006616
"SRP-dependent cotranslational protein targeting to membrane,
translocation" evidence=ISS] InterPro:IPR001901 InterPro:IPR008158
InterPro:IPR027184 Pfam:PF00584 GO:GO:0016020 GO:GO:0005622
EMBL:AE001362 GO:GO:0006616 GO:GO:0015450 HOGENOM:HOG000194479
KO:K07342 Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 OMA:TEVPVEF PANTHER:PTHR12309:SF5 PIR:H71614
RefSeq:XP_001349608.1 ProteinModelPortal:O96183
EnsemblProtists:PFB0450w:mRNA GeneID:812690 KEGG:pfa:PFB0450w
EuPathDB:PlasmoDB:PF3D7_0210000 ProtClustDB:PTZ00478 Uniprot:O96183
Length = 81
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 11 LRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVGS 68
++ F +DS+RL+++C KP++KE+T + + + KL+FIPINNI VGS
Sbjct: 23 IQTFVEDSVRLIRKCTKPNKKEYTNIVYACSFGFLIMGFIGYIIKLVFIPINNIFVGS 80
>RGD|2324557 [details] [associations]
symbol:LOC100362376 "LRRGT00025-like" species:10116 "Rattus
norvegicus" [GO:0006605 "protein targeting" evidence=IEA]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
RGD:2324557 GO:GO:0006605 GO:GO:0016020 GO:GO:0005622 GO:GO:0015450
eggNOG:NOG302441 HOGENOM:HOG000194479 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
HOVERGEN:HBG058067 EMBL:AY383680 IPI:IPI00199529
Ensembl:ENSRNOT00000042531 UCSC:RGD:2324557 InParanoid:Q6TXH4
Genevestigator:Q6TXH4 Uniprot:Q6TXH4
Length = 68
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 29/67 (43%), Positives = 36/67 (53%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIP 60
MD + + + F KDS++LVKR PD KEF K+A + I KLI I
Sbjct: 1 MDQVTQFVELSQQFLKDSIQLVKRWTNPDGKEFQKIAMDSEIGFAIMGFIGCFMKLIHIL 60
Query: 61 INNIIVG 67
INNIIVG
Sbjct: 61 INNIIVG 67
>RGD|1559542 [details] [associations]
symbol:LOC499136 "LRRGT00021" species:10116 "Rattus norvegicus"
[GO:0006605 "protein targeting" evidence=IEA] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584 PROSITE:PS01067
RGD:1559542 GO:GO:0006605 GO:GO:0016020 GO:GO:0005622 GO:GO:0015450
Gene3D:1.20.5.820 InterPro:IPR023391 SUPFAM:SSF103456
TIGRFAMs:TIGR00327 InterPro:IPR013544 Pfam:PF08333 EMBL:AY383676
IPI:IPI00454276 RefSeq:NP_001041402.1 UniGene:Rn.130458
Ensembl:ENSRNOT00000019364 GeneID:499136 KEGG:rno:499136
UCSC:RGD:1559542 eggNOG:KOG3498 GeneTree:ENSGT00700000104913
OrthoDB:EOG4M0F2Q NextBio:701952 Genevestigator:Q6TXH8
Uniprot:Q6TXH8
Length = 233
Score = 122 (48.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 28/57 (49%), Positives = 32/57 (56%)
Query: 1 MDAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLI 57
MD + +P R F KDS+RLVKR KPDRKEF K+A TAI KLI
Sbjct: 173 MDQVMQFVEPSRQFVKDSIRLVKRRTKPDRKEFQKIARATAIGFAIMGFIGFFVKLI 229
>POMBASE|SPAC4G8.02c [details] [associations]
symbol:sss1 "translocon gamma subunit Sss1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005784 "Sec61 translocon complex"
evidence=ISO] [GO:0006616 "SRP-dependent cotranslational protein
targeting to membrane, translocation" evidence=ISO] [GO:0006620
"posttranslational protein targeting to membrane" evidence=ISO]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=ISO] InterPro:IPR001901 InterPro:IPR008158 Pfam:PF00584
PROSITE:PS01067 PomBase:SPAC4G8.02c GO:GO:0016021 EMBL:CU329670
GO:GO:0005784 GO:GO:0006620 GO:GO:0006616 GO:GO:0015450
HOGENOM:HOG000194479 KO:K07342 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 eggNOG:COG2443 OMA:TEVPVEF
PIR:T38846 RefSeq:NP_593061.1 ProteinModelPortal:Q09827
STRING:Q09827 EnsemblFungi:SPAC4G8.02c.1 GeneID:2543140
KEGG:spo:SPAC4G8.02c OrthoDB:EOG4J6W1Q NextBio:20804167
Uniprot:Q09827
Length = 70
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 2 DAIDNVFDPLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPI 61
D D++F ++F K+ +KRC KPDRKEF ++ A KLI IPI
Sbjct: 3 DNADDLFQIPKNFYKEGSHFIKRCVKPDRKEFLSISKAVATGFVLMGLIGYIIKLIHIPI 62
Query: 62 NNIIVG 67
N ++VG
Sbjct: 63 NKVLVG 68
>FB|FBgn0034510 [details] [associations]
symbol:CG13426 species:7227 "Drosophila melanogaster"
[GO:0005784 "Sec61 translocon complex" evidence=ISS] [GO:0008565
"protein transporter activity" evidence=ISS] [GO:0006616
"SRP-dependent cotranslational protein targeting to membrane,
translocation" evidence=ISS] [GO:0031204 "posttranslational protein
targeting to membrane, translocation" evidence=IEA] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0071261 "Ssh1 translocon complex"
evidence=IEA] InterPro:IPR001901 InterPro:IPR008158
InterPro:IPR027184 Pfam:PF00584 EMBL:AE013599 GO:GO:0006605
GO:GO:0016020 GO:GO:0005622 GO:GO:0015450 Gene3D:1.20.5.820
InterPro:IPR023391 SUPFAM:SSF103456 TIGRFAMs:TIGR00327
eggNOG:COG2443 GeneTree:ENSGT00390000001319 PANTHER:PTHR12309:SF5
RefSeq:NP_611482.1 UniGene:Dm.27774 ProteinModelPortal:A1ZBU4
SMR:A1ZBU4 PRIDE:A1ZBU4 EnsemblMetazoa:FBtr0086295 GeneID:37312
KEGG:dme:Dmel_CG13426 UCSC:CG13426-RA FlyBase:FBgn0034510
InParanoid:A1ZBU4 OMA:QRISIGI OrthoDB:EOG4866WC PhylomeDB:A1ZBU4
ChiTaRS:CG13426 GenomeRNAi:37312 NextBio:803072 Bgee:A1ZBU4
Uniprot:A1ZBU4
Length = 105
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 10 PLRDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIV 66
P +DF K+SLR KRC KPDR+EF +++ + KL+ IPI NII+
Sbjct: 48 PSKDFYKNSLRFYKRCTKPDRREFQRISIGIGVGFLIMGLIGFVVKLMHIPIVNIIM 104
>ASPGD|ASPL0000076019 [details] [associations]
symbol:AN4589 species:162425 "Emericella nidulans"
[GO:0006616 "SRP-dependent cotranslational protein targeting to
membrane, translocation" evidence=IEA] [GO:0031204
"posttranslational protein targeting to membrane, translocation"
evidence=IEA] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0071261 "Ssh1
translocon complex" evidence=IEA] [GO:0005784 "Sec61 translocon
complex" evidence=IEA] InterPro:IPR001901 InterPro:IPR008158
Pfam:PF00584 PROSITE:PS01067 GO:GO:0006605 GO:GO:0016020
GO:GO:0005622 EMBL:BN001303 EMBL:AACD01000078 GO:GO:0015450
HOGENOM:HOG000194479 KO:K07342 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 eggNOG:COG2443 OMA:KQFAKDS
OrthoDB:EOG4J6W1Q RefSeq:XP_662193.1 ProteinModelPortal:Q5B4E1
STRING:Q5B4E1 EnsemblFungi:CADANIAT00005847 GeneID:2872388
KEGG:ani:AN4589.2 Uniprot:Q5B4E1
Length = 70
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 12 RDFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIVG 67
++F +D ++ V R KPD++EF K++ KLI IP+NN++VG
Sbjct: 13 QEFLRDGMQFVNRSQKPDKREFIKISQAVGTGFLIMGFIGYIVKLIHIPVNNVLVG 68
>SGD|S000002493 [details] [associations]
symbol:SSS1 "Subunit of the Sec61p translocation complex
(Sec61p-Sss1p-Sbh1p)" species:4932 "Saccharomyces cerevisiae"
[GO:0005784 "Sec61 translocon complex" evidence=IEA;IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0071261 "Ssh1
translocon complex" evidence=IEA;IDA] [GO:0005198 "structural
molecule activity" evidence=IGI;IMP] [GO:0006616 "SRP-dependent
cotranslational protein targeting to membrane, translocation"
evidence=IMP] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=IEA;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0031204 "posttranslational
protein targeting to membrane, translocation" evidence=IEA;IDA]
[GO:0006605 "protein targeting" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR001901
InterPro:IPR008158 InterPro:IPR027184 Pfam:PF00584 PROSITE:PS01067
SGD:S000002493 GO:GO:0016021 GO:GO:0005198 EMBL:BK006938
EMBL:Z46796 EMBL:X82086 GO:GO:0005784 GO:GO:0031204 GO:GO:0006616
GO:GO:0015450 PDB:2WW9 PDB:2WWA PDBsum:2WW9 PDBsum:2WWA EMBL:X74499
HOGENOM:HOG000194479 KO:K07342 Gene3D:1.20.5.820 InterPro:IPR023391
SUPFAM:SSF103456 TIGRFAMs:TIGR00327 eggNOG:COG2443
GeneTree:ENSGT00390000001319 OMA:KQFAKDS TCDB:3.A.5.8.1
OrthoDB:EOG4J6W1Q EMBL:Z74382 EMBL:AY557659 PIR:S48775
RefSeq:NP_010371.1 ProteinModelPortal:P35179 SMR:P35179
DIP:DIP-2432N IntAct:P35179 MINT:MINT-1357799 STRING:P35179
PaxDb:P35179 PeptideAtlas:P35179 EnsemblFungi:YDR086C GeneID:851659
KEGG:sce:YDR086C CYGD:YDR086c EvolutionaryTrace:P35179
NextBio:969263 Genevestigator:P35179 GermOnline:YDR086C
GO:GO:0071261 PANTHER:PTHR12309:SF5 Uniprot:P35179
Length = 80
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 13 DFAKDSLRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXXKLIFIPINNIIV 66
+F ++ + + +C KPD KE+TK+ I KLI IPI +IV
Sbjct: 27 EFVREGTQFLAKCKKPDLKEYTKIVKAVGIGFIAVGIIGYAIKLIHIPIRYVIV 80
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.329 0.146 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 69 57 0.00091 102 3 11 22 0.41 27
29 0.44 27
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 420 (45 KB)
Total size of DFA: 68 KB (2060 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 5.52u 0.21s 5.73t Elapsed: 00:00:01
Total cpu time: 5.52u 0.21s 5.73t Elapsed: 00:00:01
Start: Fri May 10 06:44:31 2013 End: Fri May 10 06:44:32 2013