Query 035245
Match_columns 69
No_of_seqs 101 out of 104
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 17:03:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035245.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035245hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1h9ii_ g.3.2.1 (I:) Trypsin i 61.1 0.61 4.4E-05 23.1 -0.5 14 39-52 5-18 (30)
2 d2diga1 b.34.9.1 (A:8-62) Lami 26.8 9.7 0.00071 20.8 0.8 14 42-56 4-17 (55)
3 d1j75a_ a.4.5.19 (A:) Dlm-1 {M 12.6 31 0.0023 18.8 0.8 13 39-51 36-48 (57)
4 d1mcvi_ g.3.2.1 (I:) Trypsin i 9.6 26 0.0019 16.6 -0.3 12 41-52 7-18 (28)
5 d1uufa1 b.35.1.2 (A:3-144,A:31 8.3 1.3E+02 0.0093 17.7 2.7 41 12-52 15-59 (179)
6 d1atxa_ g.9.1.1 (A:) Sea anemo 6.8 30 0.0022 18.1 -0.9 11 28-38 15-25 (46)
7 d1lu0a_ g.3.2.1 (A:) Trypsin i 6.2 45 0.0033 15.8 -0.3 13 39-51 6-18 (29)
8 d1ewka_ c.93.1.1 (A:) Metabotr 6.2 67 0.0049 21.0 0.5 14 44-57 5-18 (477)
9 d2sh1a_ g.9.1.1 (A:) Sea anemo 5.9 38 0.0028 17.8 -0.7 11 28-38 14-24 (48)
10 d2bjra1 b.169.1.1 (A:6-184) Sp 5.4 52 0.0038 21.2 -0.5 20 39-59 40-59 (179)
No 1
>d1h9ii_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=61.07 E-value=0.61 Score=23.10 Aligned_cols=14 Identities=43% Similarity=0.693 Sum_probs=11.9
Q ss_pred hhhhhhccCCceee
Q 035245 39 VLYRAKQDGPVVLG 52 (69)
Q Consensus 39 IlyR~k~Dg~~vlG 52 (69)
||-|.|||+|-+-|
T Consensus 5 ilirckqdsdclag 18 (30)
T d1h9ii_ 5 ILIRCKQDSDCLAG 18 (30)
T ss_dssp CCCBCSSGGGSCTT
T ss_pred EEEEeccCccccce
Confidence 68899999998765
No 2
>d2diga1 b.34.9.1 (A:8-62) Lamin-b receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.78 E-value=9.7 Score=20.82 Aligned_cols=14 Identities=57% Similarity=0.816 Sum_probs=11.7
Q ss_pred hhhccCCceeeecCc
Q 035245 42 RAKQDGPVVLGWRHP 56 (69)
Q Consensus 42 R~k~Dg~~vlG~~~P 56 (69)
|.+.|+++|+| |.|
T Consensus 4 ~k~~~Ge~vm~-RwP 17 (55)
T d2diga1 4 RKFADGEVVRG-RWP 17 (55)
T ss_dssp CSSCSSCEEEE-ECT
T ss_pred ccccCCcEEEe-ecC
Confidence 56789999999 766
No 3
>d1j75a_ a.4.5.19 (A:) Dlm-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=12.61 E-value=31 Score=18.76 Aligned_cols=13 Identities=46% Similarity=0.657 Sum_probs=10.7
Q ss_pred hhhhhhccCCcee
Q 035245 39 VLYRAKQDGPVVL 51 (69)
Q Consensus 39 IlyR~k~Dg~~vl 51 (69)
+|||.|+.+.+-+
T Consensus 36 VL~rlkke~kVsl 48 (57)
T d1j75a_ 36 VLYRLKKEDRVSS 48 (57)
T ss_dssp HHHHHHHTTSEEE
T ss_pred HHHHHHhcccccc
Confidence 6899999988654
No 4
>d1mcvi_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=9.61 E-value=26 Score=16.56 Aligned_cols=12 Identities=42% Similarity=0.625 Sum_probs=9.3
Q ss_pred hhhhccCCceee
Q 035245 41 YRAKQDGPVVLG 52 (69)
Q Consensus 41 yR~k~Dg~~vlG 52 (69)
-|.++|+|-+-|
T Consensus 7 m~c~~dsdclag 18 (28)
T d1mcvi_ 7 MRCKQDSDCLAG 18 (28)
T ss_dssp CBCSSGGGSCTT
T ss_pred hhcccccccccc
Confidence 378899988765
No 5
>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}
Probab=8.29 E-value=1.3e+02 Score=17.70 Aligned_cols=41 Identities=17% Similarity=0.067 Sum_probs=23.9
Q ss_pred cCccccCCCCceeeeeeeeccch----hhhhhhhhhhccCCceee
Q 035245 12 YNGMALHRPKRWHTVTGKGLCAV----MWFWVLYRAKQDGPVVLG 52 (69)
Q Consensus 12 y~g~~~p~p~~~~~~~a~~Lga~----MWFWIlyR~k~Dg~~vlG 52 (69)
..=++.|+|.+-+++.-...+++ ++++-=.......|.++|
T Consensus 15 i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~G 59 (179)
T d1uufa1 15 PMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPG 59 (179)
T ss_dssp EEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCC
T ss_pred EEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeecccccccccc
Confidence 33367888888777666665555 344433333445566666
No 6
>d1atxa_ g.9.1.1 (A:) Sea anemone toxin IA {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=6.84 E-value=30 Score=18.12 Aligned_cols=11 Identities=18% Similarity=0.957 Sum_probs=8.7
Q ss_pred eeeccchhhhh
Q 035245 28 GKGLCAVMWFW 38 (69)
Q Consensus 28 a~~Lga~MWFW 38 (69)
+.-|++++|++
T Consensus 15 gntLsGtvw~~ 25 (46)
T d1atxa_ 15 GNSMSGTIWVF 25 (46)
T ss_dssp TSSEEEEEESS
T ss_pred CCccceeEEec
Confidence 45688999987
No 7
>d1lu0a_ g.3.2.1 (A:) Trypsin inhibitor {Squash (Cucurbita maxima) [TaxId: 3661]}
Probab=6.21 E-value=45 Score=15.85 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=9.7
Q ss_pred hhhhhhccCCcee
Q 035245 39 VLYRAKQDGPVVL 51 (69)
Q Consensus 39 IlyR~k~Dg~~vl 51 (69)
||-+.|+|+|-+.
T Consensus 6 Ilm~Ck~DSDCla 18 (29)
T d1lu0a_ 6 ILLECKKDSDCLA 18 (29)
T ss_dssp CCCBCSSGGGSCT
T ss_pred HHHHhcccccchh
Confidence 5677889988653
No 8
>d1ewka_ c.93.1.1 (A:) Metabotropic glutamate receptor subtype 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=6.20 E-value=67 Score=21.04 Aligned_cols=14 Identities=29% Similarity=0.479 Sum_probs=12.1
Q ss_pred hccCCceeeecCcC
Q 035245 44 KQDGPVVLGWRHPW 57 (69)
Q Consensus 44 k~Dg~~vlG~~~Pw 57 (69)
+-|||++||.=||-
T Consensus 5 ~~~Gd~~iGGlFp~ 18 (477)
T d1ewka_ 5 RMDGDVIIGALFSV 18 (477)
T ss_dssp EECCSEEEEEEECS
T ss_pred EcCCCEEEEEEEEC
Confidence 45999999999985
No 9
>d2sh1a_ g.9.1.1 (A:) Sea anemone neurotoxin-1 {Sea anemone (Stichodactyla helianthus) [TaxId: 6123]}
Probab=5.94 E-value=38 Score=17.78 Aligned_cols=11 Identities=9% Similarity=-0.139 Sum_probs=8.1
Q ss_pred eeeccchhhhh
Q 035245 28 GKGLCAVMWFW 38 (69)
Q Consensus 28 a~~Lga~MWFW 38 (69)
+.-|++++||+
T Consensus 14 gntlsGtvw~~ 24 (48)
T d2sh1a_ 14 TAPLTGTVDLG 24 (48)
T ss_dssp SCSEEEEEEES
T ss_pred CCcceeEEEec
Confidence 44578889985
No 10
>d2bjra1 b.169.1.1 (A:6-184) Sperm motility protein MFP2 {Pig roundworm (Ascaris suum), isoform B [TaxId: 6253]}
Probab=5.43 E-value=52 Score=21.22 Aligned_cols=20 Identities=25% Similarity=0.337 Sum_probs=16.3
Q ss_pred hhhhhhccCCceeeecCcCCC
Q 035245 39 VLYRAKQDGPVVLGWRHPWEG 59 (69)
Q Consensus 39 IlyR~k~Dg~~vlG~~~Pw~~ 59 (69)
|+=|+|.|+-+|-. .|||+.
T Consensus 40 i~GRaWn~~Gkv~~-sF~~~~ 59 (179)
T d2bjra1 40 MHGRAWNNGGVIEC-SFPYNK 59 (179)
T ss_dssp EEEEEEEETTEEEE-EEEETT
T ss_pred CccceecCCCeEEE-EeecCC
Confidence 34599999988888 899875
Done!