Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>035266
MGESSDSVSIDIDMVPFGGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALNCIVFFFF
HFFIFFIFF

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035266
        (69 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2050404 - symbol:NDL3 "AT2G19620" species:3702...   141  3.9e-09   1
TAIR|locus:2165101 - symbol:NDL1 "AT5G56750" species:3702...   130  6.3e-08   1
TAIR|locus:2181905 - symbol:NDL2 "AT5G11790" species:3702...   127  1.3e-07   1


>TAIR|locus:2050404 [details] [associations]
            symbol:NDL3 "AT2G19620" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0030154 "cell differentiation"
            evidence=ISS] Pfam:PF03096 EMBL:CP002685 GenomeReviews:CT485783_GR
            EMBL:AC005917 InterPro:IPR004142 PANTHER:PTHR11034 UniGene:At.39818
            UniGene:At.43300 HOGENOM:HOG000237602 ProtClustDB:CLSN2683187
            InterPro:IPR015511 PANTHER:PTHR11034:SF3 IPI:IPI00537451 PIR:A84579
            RefSeq:NP_179552.1 ProteinModelPortal:Q9ZUN1 SMR:Q9ZUN1
            EnsemblPlants:AT2G19620.1 GeneID:816481 KEGG:ath:AT2G19620
            TAIR:At2g19620 InParanoid:Q9ZUN1 OMA:ENAPVFP PhylomeDB:Q9ZUN1
            ArrayExpress:Q9ZUN1 Genevestigator:Q9ZUN1 Uniprot:Q9ZUN1
        Length = 347

 Score = 141 (54.7 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 30/36 (83%), Positives = 30/36 (83%)

Query:    18 GGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALN 53
             GGKE  VKT  GSVSV V GDQEKPALITYPDVALN
Sbjct:    18 GGKEHHVKTCHGSVSVVVYGDQEKPALITYPDVALN 53


>TAIR|locus:2165101 [details] [associations]
            symbol:NDL1 "AT5G56750" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0030154 "cell differentiation"
            evidence=ISS] [GO:0060918 "auxin transport" evidence=IMP]
            Pfam:PF03096 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB013392
            InterPro:IPR004142 PANTHER:PTHR11034 eggNOG:NOG310435 OMA:TTGVQLK
            HOGENOM:HOG000237602 ProtClustDB:CLSN2683187 InterPro:IPR015511
            PANTHER:PTHR11034:SF3 EMBL:AY050428 EMBL:AY090332 EMBL:AY087544
            IPI:IPI00546806 RefSeq:NP_200486.1 UniGene:At.9276
            ProteinModelPortal:Q9FJT7 SMR:Q9FJT7 STRING:Q9FJT7
            EnsemblPlants:AT5G56750.1 GeneID:835777 KEGG:ath:AT5G56750
            TAIR:At5g56750 InParanoid:Q9FJT7 PhylomeDB:Q9FJT7
            Genevestigator:Q9FJT7 GO:GO:0060918 Uniprot:Q9FJT7
        Length = 346

 Score = 130 (50.8 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 27/36 (75%), Positives = 30/36 (83%)

Query:    18 GGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALN 53
             GGKE  VKT+ G VSV V GD+EKPALITYPD+ALN
Sbjct:    18 GGKEHRVKTASGVVSVIVYGDREKPALITYPDLALN 53


>TAIR|locus:2181905 [details] [associations]
            symbol:NDL2 "AT5G11790" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0030154 "cell differentiation"
            evidence=ISS] Pfam:PF03096 EMBL:CP002688 InterPro:IPR004142
            PANTHER:PTHR11034 EMBL:AF361823 EMBL:AY059161 IPI:IPI00537398
            RefSeq:NP_568251.1 UniGene:At.19119 ProteinModelPortal:Q9ASU8
            EnsemblPlants:AT5G11790.1 GeneID:831051 KEGG:ath:AT5G11790
            TAIR:At5g11790 HOGENOM:HOG000237602 InParanoid:Q9ASU8 OMA:TMNQANV
            PhylomeDB:Q9ASU8 ProtClustDB:CLSN2683187 Genevestigator:Q9ASU8
            InterPro:IPR015511 PANTHER:PTHR11034:SF3 Uniprot:Q9ASU8
        Length = 344

 Score = 127 (49.8 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 24/36 (66%), Positives = 30/36 (83%)

Query:    18 GGKECVVKTSRGSVSVFVCGDQEKPALITYPDVALN 53
             GG+E +V+T+ G V V VCGD +KPALITYPD+ALN
Sbjct:    18 GGQEHLVETTYGPVCVAVCGDPDKPALITYPDIALN 53


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.140   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       69        46   0.00091  102 3  11 22  0.48    26
                                                     29  0.43    25


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  454 (48 KB)
  Total size of DFA:  76 KB (2062 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.62u 0.14s 6.76t   Elapsed:  00:00:00
  Total cpu time:  6.62u 0.14s 6.76t   Elapsed:  00:00:00
  Start:  Fri May 10 06:56:16 2013   End:  Fri May 10 06:56:16 2013

Back to top