BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035273
MKVQMNCQKCRTQALKHVADADGVDFVGLEGSEKDKVVVIGEGVDAVELAAGLRKKVGHT
DLISVAEIK

High Scoring Gene Products

Symbol, full name Information P value
AT4G05030 protein from Arabidopsis thaliana 3.2e-17
AT3G20180 protein from Arabidopsis thaliana 5.8e-11
AT3G07600 protein from Arabidopsis thaliana 5.5e-06
AT5G48290 protein from Arabidopsis thaliana 1.9e-05
AT1G01490 protein from Arabidopsis thaliana 0.00021
AT5G52740 protein from Arabidopsis thaliana 0.00027
AT5G23760 protein from Arabidopsis thaliana 0.00035
AT5G26690 protein from Arabidopsis thaliana 0.00057

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035273
        (69 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2138376 - symbol:AT4G05030 "AT4G05030" species...   211  3.2e-17   1
TAIR|locus:2087580 - symbol:AT3G20180 "AT3G20180" species...   152  5.8e-11   1
TAIR|locus:2091112 - symbol:AT3G07600 species:3702 "Arabi...   105  5.5e-06   1
TAIR|locus:2156253 - symbol:AT5G48290 species:3702 "Arabi...   101  1.9e-05   1
TAIR|locus:2025421 - symbol:AT1G01490 species:3702 "Arabi...    92  0.00021   1
TAIR|locus:2149584 - symbol:AT5G52740 "AT5G52740" species...    89  0.00027   1
TAIR|locus:2172808 - symbol:AT5G23760 "AT5G23760" species...    88  0.00035   1
TAIR|locus:2146834 - symbol:AT5G26690 species:3702 "Arabi...    86  0.00057   1


>TAIR|locus:2138376 [details] [associations]
            symbol:AT4G05030 "AT4G05030" species:3702 "Arabidopsis
            thaliana" [GO:0046872 "metal ion binding" evidence=ISS]
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161502 EMBL:AF162444
            IPI:IPI00529329 PIR:C85063 RefSeq:NP_567284.1 UniGene:At.54153
            ProteinModelPortal:Q9S9T4 SMR:Q9S9T4 EnsemblPlants:AT4G05030.1
            GeneID:825845 KEGG:ath:AT4G05030 TAIR:At4g05030 eggNOG:NOG284398
            InParanoid:Q9S9T4 OMA:YYGYYCH PhylomeDB:Q9S9T4
            ProtClustDB:CLSN2917512 ArrayExpress:Q9S9T4 Genevestigator:Q9S9T4
            Uniprot:Q9S9T4
        Length = 110

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 43/68 (63%), Positives = 49/68 (72%)

Query:     1 MKVQMNCQKCRTQALKHVADADGVDFVGLEGSEKDKVVVIGEGVDAVELAAGLRKKVGHT 60
             M V M C KCR++ALK  A   GV FVG+EG EKDKVVVIGEGVDA  L   LRKKVG  
Sbjct:    40 MSVSMRCDKCRSEALKIGAKTTGVTFVGIEGEEKDKVVVIGEGVDAACLVVRLRKKVGFA 99

Query:    61 DLISVAEI 68
             D+ISV ++
Sbjct:   100 DIISVTDV 107


>TAIR|locus:2087580 [details] [associations]
            symbol:AT3G20180 "AT3G20180" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND]
            EMBL:CP002686 IPI:IPI00542114 RefSeq:NP_188653.1 UniGene:At.63564
            ProteinModelPortal:F4JDJ0 DNASU:821562 EnsemblPlants:AT3G20180.1
            GeneID:821562 KEGG:ath:AT3G20180 OMA:GEFQDEL PhylomeDB:F4JDJ0
            Uniprot:F4JDJ0
        Length = 118

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 29/69 (42%), Positives = 46/69 (66%)

Query:     1 MKVQMNCQKCRTQALKHVADADGVDFVGLEGSEKDKVVVIGEGVDAVELAAGLRKKVGHT 60
             +K+ +N +KCR +A++    ADGV  V +EG  +D++VV+G+GVD+  L   LRKK  H 
Sbjct:     3 IKLSVNSEKCRKKAMQVAVAADGVTSVAMEGEFQDELVVVGDGVDSASLIMALRKKACHV 62

Query:    61 DLISVAEIK 69
              L ++ E+K
Sbjct:    63 TLETLEEVK 71


>TAIR|locus:2091112 [details] [associations]
            symbol:AT3G07600 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0030001 EMBL:AC009176
            ProtClustDB:CLSN2684848 IPI:IPI00519941 RefSeq:NP_187417.1
            UniGene:At.18333 UniGene:At.48632 ProteinModelPortal:Q9SSF0
            SMR:Q9SSF0 EnsemblPlants:AT3G07600.1 GeneID:819951
            KEGG:ath:AT3G07600 eggNOG:NOG286763 OMA:QDPNCRI
            Genevestigator:Q9SSF0 Uniprot:Q9SSF0
        Length = 157

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 22/69 (31%), Positives = 40/69 (57%)

Query:     1 MKVQMNCQKCRTQALKHVADADGVDFVGLEGSEKDKVVVIGEGVDAVELAAGLRKKVGHT 60
             +++ M     R +A+K      GV+ V ++G  ++++ V G  VD + L   LRKKV   
Sbjct:     7 IRIAMTDDTTRAKAMKTAVQFKGVNAVEIKGDHRNQIEVTGVEVDMIALINTLRKKVAFA 66

Query:    61 DLISVAEIK 69
             +L+SVA+++
Sbjct:    67 ELVSVAKVE 75


>TAIR|locus:2156253 [details] [associations]
            symbol:AT5G48290 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001
            HOGENOM:HOG000237719 EMBL:BT020300 EMBL:BT020469 IPI:IPI00541268
            RefSeq:NP_568695.1 UniGene:At.28683 ProteinModelPortal:Q5PNZ7
            SMR:Q5PNZ7 EnsemblPlants:AT5G48290.1 GeneID:834882
            KEGG:ath:AT5G48290 TAIR:At5g48290 eggNOG:NOG241974
            InParanoid:Q5PNZ7 OMA:NDIGEPV PhylomeDB:Q5PNZ7
            ProtClustDB:CLSN2684848 Genevestigator:Q5PNZ7 Uniprot:Q5PNZ7
        Length = 181

 Score = 101 (40.6 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query:     1 MKVQMNCQKCRTQALKHVADADGVDFVGLEGSEKDKVVVIGEGVDAVELAAGLRKKVGHT 60
             ++V M   K R +A+       GV  V ++G  ++++ V G  VD + L   LRKKV   
Sbjct:     7 IRVTMTDDKTRAKAMTKAVQFKGVSAVEIKGDHRNQIEVTGVEVDMIPLIQILRKKVAFA 66

Query:    61 DLISVAEIK 69
             +L+SV +++
Sbjct:    67 ELVSVTKVE 75


>TAIR|locus:2025421 [details] [associations]
            symbol:AT1G01490 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002684
            GO:GO:0046872 GO:GO:0030001 EMBL:AY063805 EMBL:AY091276 EMBL:Y10084
            IPI:IPI00534476 RefSeq:NP_001030928.1 RefSeq:NP_171656.1
            UniGene:At.27454 ProteinModelPortal:O03982 PaxDb:O03982
            PRIDE:O03982 EnsemblPlants:AT1G01490.1 EnsemblPlants:AT1G01490.2
            GeneID:839440 KEGG:ath:AT1G01490 TAIR:At1g01490 eggNOG:NOG282717
            InParanoid:O03982 OMA:TYYYAQS PhylomeDB:O03982
            ProtClustDB:CLSN2912783 ArrayExpress:O03982 Genevestigator:O03982
            Uniprot:O03982
        Length = 177

 Score = 92 (37.4 bits), Expect = 0.00021, P = 0.00021
 Identities = 23/69 (33%), Positives = 40/69 (57%)

Query:     1 MKVQMNCQKCRTQALKHVADADGVDFVGLEGSEKDKVVVIGEGVDAVELAAGLRKKVGHT 60
             +K+ ++  + + +ALK V+   G+D + ++  EK K+ VIG  VD V + + LRK    T
Sbjct:     6 LKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEK-KLTVIGT-VDPVNVVSKLRKYWPMT 63

Query:    61 DLISVAEIK 69
             D++ V   K
Sbjct:    64 DIVLVGPAK 72


>TAIR|locus:2149584 [details] [associations]
            symbol:AT5G52740 "AT5G52740" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0030001
            "metal ion transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
            stress" evidence=RCA] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001 EMBL:AB025606
            HOGENOM:HOG000237719 IPI:IPI00529707 RefSeq:NP_200086.1
            UniGene:At.55513 ProteinModelPortal:Q9LTE3 SMR:Q9LTE3
            EnsemblPlants:AT5G52740.1 GeneID:835351 KEGG:ath:AT5G52740
            TAIR:At5g52740 eggNOG:NOG241888 InParanoid:Q9LTE3 OMA:CHTEFIS
            PhylomeDB:Q9LTE3 ProtClustDB:CLSN2916212 Genevestigator:Q9LTE3
            Uniprot:Q9LTE3
        Length = 118

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 23/69 (33%), Positives = 40/69 (57%)

Query:     1 MKVQMNCQKCRTQALKHVADADGVDFVGLEGSEKDKVVVIGEGVDAVELAAGLRKKVGHT 60
             +K+ ++C+K + +A+  V    GV+ V ++     K+ V GE +DA  +   L KK+ HT
Sbjct:     6 LKLDVHCEKTKQKAMSTVCCLSGVNSVEVKDG---KLTVTGE-IDAYMIVKKL-KKICHT 60

Query:    61 DLISVAEIK 69
             + ISV  +K
Sbjct:    61 EFISVGPVK 69


>TAIR|locus:2172808 [details] [associations]
            symbol:AT5G23760 "AT5G23760" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0046872
            "metal ion binding" evidence=ISS] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:BT024557 IPI:IPI00535681
            RefSeq:NP_568436.1 UniGene:At.8741 ProteinModelPortal:Q2HIM4
            SMR:Q2HIM4 PaxDb:Q2HIM4 PRIDE:Q2HIM4 EnsemblPlants:AT5G23760.1
            GeneID:832441 KEGG:ath:AT5G23760 TAIR:At5g23760 eggNOG:NOG259881
            HOGENOM:HOG000237719 InParanoid:Q2HIM4 OMA:TIIGEMD PhylomeDB:Q2HIM4
            ProtClustDB:CLSN2689856 Genevestigator:Q2HIM4 Uniprot:Q2HIM4
        Length = 103

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 28/70 (40%), Positives = 40/70 (57%)

Query:     1 MKV-QMNCQKCRTQALKHVADADGVDFVGLEGSEKDKVVVIGEGVDAVELAAGLRKKVGH 59
             +KV  M   K + +A++  AD  GVD +  +  ++ K+ VIG  +DAV +   L KKVG 
Sbjct:     7 LKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQ-KLTVIGL-MDAVAVVKKL-KKVGK 63

Query:    60 TDLISVAEIK 69
              DLISV   K
Sbjct:    64 VDLISVGPAK 73


>TAIR|locus:2146834 [details] [associations]
            symbol:AT5G26690 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001
            SUPFAM:SSF55008 HOGENOM:HOG000237719 EMBL:BT004711 EMBL:AK118666
            IPI:IPI00518037 RefSeq:NP_850876.1 UniGene:At.30849
            ProteinModelPortal:Q8GWS3 SMR:Q8GWS3 EnsemblPlants:AT5G26690.1
            GeneID:832720 KEGG:ath:AT5G26690 TAIR:At5g26690 eggNOG:NOG328597
            InParanoid:Q8GWS3 OMA:HAIMEAV PhylomeDB:Q8GWS3
            ProtClustDB:CLSN2688101 Genevestigator:Q8GWS3 Uniprot:Q8GWS3
        Length = 114

 Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
 Identities = 23/69 (33%), Positives = 40/69 (57%)

Query:     1 MKVQMNCQKCRTQALKHVADADGVDFVGLEGSEKDKVVVIGEGVDAVELAAGLRKKVGHT 60
             +KV ++C+KC+   ++ V + +GV+ V L+  EK  + V+G  +D V +A  L+K     
Sbjct:     8 IKVDIDCEKCKHAIMEAVTELEGVNIVSLD-QEKSILTVVGT-MDPVCVAEQLKKINKKP 65

Query:    61 DLISVAEIK 69
              +ISV   K
Sbjct:    66 VVISVGPPK 74


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.371    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       69        69   0.00091  102 3  11 22  0.47    28
                                                     29  0.39    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  416 (44 KB)
  Total size of DFA:  74 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.95u 0.14s 8.09t   Elapsed:  00:00:01
  Total cpu time:  7.95u 0.14s 8.09t   Elapsed:  00:00:01
  Start:  Fri May 10 06:59:45 2013   End:  Fri May 10 06:59:46 2013

Back to top