Query 035275
Match_columns 69
No_of_seqs 101 out of 1385
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 17:28:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035275.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035275hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 99.5 7.4E-14 2.5E-18 78.2 7.4 57 1-57 282-341 (365)
2 4ggc_A P55CDC, cell division c 99.5 3.7E-13 1.3E-17 72.8 7.0 58 4-61 258-315 (318)
3 2ynn_A Coatomer subunit beta'; 99.4 2.6E-12 8.8E-17 70.2 7.2 58 2-59 200-259 (304)
4 2w18_A PALB2, fancn, partner a 99.4 1.8E-12 6.3E-17 73.2 6.3 55 2-56 297-354 (356)
5 3frx_A Guanine nucleotide-bind 99.4 1E-11 3.4E-16 68.3 9.0 59 1-59 78-138 (319)
6 2ynn_A Coatomer subunit beta'; 99.4 2.6E-12 8.8E-17 70.2 6.7 58 1-58 68-127 (304)
7 3vu4_A KMHSV2; beta-propeller 99.4 6E-12 2.1E-16 70.1 8.2 58 1-58 208-270 (355)
8 4gga_A P55CDC, cell division c 99.4 6.1E-12 2.1E-16 71.1 8.2 51 6-56 340-392 (420)
9 2xzm_R RACK1; ribosome, transl 99.3 5.5E-12 1.9E-16 69.7 7.0 57 2-58 90-148 (343)
10 3ow8_A WD repeat-containing pr 99.3 8.2E-12 2.8E-16 68.8 7.6 58 1-58 177-236 (321)
11 4gqb_B Methylosome protein 50; 99.3 3.7E-12 1.3E-16 71.0 6.2 58 2-59 229-289 (344)
12 2ymu_A WD-40 repeat protein; u 99.3 1.6E-11 5.5E-16 71.1 8.2 59 1-60 29-89 (577)
13 3ow8_A WD repeat-containing pr 99.3 9.9E-12 3.4E-16 68.5 7.0 58 1-58 219-278 (321)
14 4g56_B MGC81050 protein; prote 99.3 5.4E-12 1.8E-16 70.4 5.7 55 2-57 284-341 (357)
15 1vyh_C Platelet-activating fac 99.3 1.8E-11 6.2E-16 69.3 7.9 57 2-58 310-368 (410)
16 2pbi_B Guanine nucleotide-bind 99.3 1.3E-11 4.4E-16 68.8 7.1 57 2-58 212-270 (354)
17 4gqb_B Methylosome protein 50; 99.3 1.4E-11 4.7E-16 68.8 7.2 58 1-58 140-200 (344)
18 1got_B GT-beta; complex (GTP-b 99.3 1.1E-11 3.9E-16 68.5 6.8 55 1-55 283-339 (340)
19 1vyh_C Platelet-activating fac 99.3 4.6E-12 1.6E-16 71.7 5.2 57 2-58 122-180 (410)
20 2pbi_B Guanine nucleotide-bind 99.3 1.8E-11 6.3E-16 68.1 7.4 55 1-55 297-353 (354)
21 3lrv_A PRE-mRNA-splicing facto 99.3 1.3E-11 4.6E-16 68.1 6.8 58 1-58 183-243 (343)
22 1got_B GT-beta; complex (GTP-b 99.3 1.6E-11 5.6E-16 67.9 7.1 57 2-58 198-256 (340)
23 3iz6_a 40S ribosomal protein R 99.3 1.4E-11 4.6E-16 69.1 6.7 57 2-58 220-279 (380)
24 1erj_A Transcriptional repress 99.3 2.3E-11 7.9E-16 68.4 7.5 57 1-57 136-194 (393)
25 3frx_A Guanine nucleotide-bind 99.3 3.5E-11 1.2E-15 66.1 7.5 57 2-58 168-226 (319)
26 4ery_A WD repeat-containing pr 99.3 1E-10 3.5E-15 63.6 8.9 57 2-58 251-311 (312)
27 3iz6_a 40S ribosomal protein R 99.2 5.2E-11 1.8E-15 66.7 7.9 59 1-59 311-375 (380)
28 4ery_A WD repeat-containing pr 99.2 7.7E-11 2.6E-15 64.1 7.7 58 1-58 36-95 (312)
29 4aow_A Guanine nucleotide-bind 99.2 5.9E-11 2E-15 64.7 7.2 58 1-58 52-116 (340)
30 2pm7_B Protein transport prote 99.2 2.8E-11 9.6E-16 65.9 5.8 58 2-59 172-238 (297)
31 3zwl_B Eukaryotic translation 99.2 8.5E-11 2.9E-15 64.4 7.7 58 1-58 45-104 (369)
32 4aow_A Guanine nucleotide-bind 99.2 9.2E-11 3.2E-15 63.9 7.5 56 2-57 187-244 (340)
33 4gq1_A NUP37; propeller, trans 99.2 2.3E-11 7.7E-16 68.6 5.0 58 2-59 158-218 (393)
34 3dm0_A Maltose-binding peripla 99.2 6.6E-11 2.2E-15 70.4 7.0 57 1-57 443-501 (694)
35 2xzm_R RACK1; ribosome, transl 99.2 6.9E-11 2.4E-15 65.3 6.6 58 1-58 40-106 (343)
36 3fm0_A Protein CIAO1; WDR39,SG 99.2 5.8E-11 2E-15 65.8 6.2 58 1-58 74-135 (345)
37 3vl1_A 26S proteasome regulato 99.2 5.3E-11 1.8E-15 66.6 6.1 58 1-58 152-211 (420)
38 4e54_B DNA damage-binding prot 99.2 1.2E-10 4.2E-15 66.1 7.6 59 2-60 134-197 (435)
39 2pm9_A Protein WEB1, protein t 99.2 1.2E-10 4.1E-15 64.9 7.2 58 1-58 276-336 (416)
40 1erj_A Transcriptional repress 99.2 9.3E-11 3.2E-15 65.9 6.8 57 1-57 323-387 (393)
41 2ymu_A WD-40 repeat protein; u 99.2 5.3E-11 1.8E-15 68.9 5.9 54 1-55 521-576 (577)
42 3k26_A Polycomb protein EED; W 99.2 8.1E-11 2.8E-15 64.5 6.3 57 2-58 87-146 (366)
43 2pm7_B Protein transport prote 99.2 7.8E-11 2.7E-15 64.1 6.2 59 1-59 22-86 (297)
44 3bg1_A Protein SEC13 homolog; 99.2 6.9E-11 2.4E-15 64.9 5.8 58 1-58 26-89 (316)
45 1nr0_A Actin interacting prote 99.2 1.3E-10 4.6E-15 68.5 7.3 58 1-58 203-269 (611)
46 3f3f_A Nucleoporin SEH1; struc 99.2 3.2E-11 1.1E-15 65.3 4.4 58 2-59 232-337 (351)
47 1nr0_A Actin interacting prote 99.2 9.5E-11 3.2E-15 69.1 6.6 56 2-57 162-219 (611)
48 3vl1_A 26S proteasome regulato 99.2 1.2E-10 4.1E-15 65.2 6.7 58 1-58 110-169 (420)
49 2aq5_A Coronin-1A; WD40 repeat 99.2 1.5E-10 5E-15 65.0 7.0 57 2-58 146-206 (402)
50 4g56_B MGC81050 protein; prote 99.2 3.2E-10 1.1E-14 63.3 8.3 57 1-57 152-211 (357)
51 3v7d_B Cell division control p 99.2 1.4E-10 4.9E-15 65.8 6.9 57 1-58 133-191 (464)
52 3lrv_A PRE-mRNA-splicing facto 99.2 2.8E-10 9.6E-15 62.8 7.9 59 1-59 140-201 (343)
53 3bg1_A Protein SEC13 homolog; 99.2 9.4E-11 3.2E-15 64.3 6.0 57 2-58 73-135 (316)
54 4ggc_A P55CDC, cell division c 99.2 1.5E-10 5E-15 62.6 6.5 56 2-58 38-97 (318)
55 2hes_X YDR267CP; beta-propelle 99.1 1.4E-10 4.9E-15 63.9 6.4 57 1-57 71-136 (330)
56 3mmy_A MRNA export factor; mRN 99.1 1.5E-10 5.2E-15 63.3 6.4 58 2-59 56-117 (368)
57 3dm0_A Maltose-binding peripla 99.1 1.4E-10 4.8E-15 69.0 6.6 57 2-58 533-591 (694)
58 3f3f_A Nucleoporin SEH1; struc 99.1 3.8E-10 1.3E-14 61.1 7.7 57 1-57 72-141 (351)
59 2aq5_A Coronin-1A; WD40 repeat 99.1 1.5E-10 5E-15 65.0 5.9 58 1-58 95-162 (402)
60 3odt_A Protein DOA1; ubiquitin 99.1 2.4E-10 8.1E-15 61.6 6.4 56 1-56 30-87 (313)
61 2hes_X YDR267CP; beta-propelle 99.1 1.1E-09 3.8E-14 60.4 9.1 57 1-57 120-182 (330)
62 4gq1_A NUP37; propeller, trans 99.1 3.4E-10 1.2E-14 63.8 7.2 50 2-51 331-380 (393)
63 3k26_A Polycomb protein EED; W 99.1 3.4E-10 1.2E-14 62.0 6.9 58 1-58 129-191 (366)
64 2oit_A Nucleoporin 214KDA; NH2 99.1 1.7E-10 5.9E-15 66.1 5.5 57 2-58 164-222 (434)
65 3sfz_A APAF-1, apoptotic pepti 99.1 4.4E-10 1.5E-14 69.9 7.7 59 1-59 628-688 (1249)
66 3fm0_A Protein CIAO1; WDR39,SG 99.1 5.8E-10 2E-14 61.8 7.4 60 1-60 29-93 (345)
67 4gga_A P55CDC, cell division c 99.1 4.3E-10 1.5E-14 63.6 6.9 57 2-59 118-178 (420)
68 3gre_A Serine/threonine-protei 99.1 2.7E-10 9.3E-15 64.3 6.0 57 2-58 184-244 (437)
69 3i2n_A WD repeat-containing pr 99.1 2.5E-10 8.5E-15 62.4 5.4 62 2-63 274-355 (357)
70 1gxr_A ESG1, transducin-like e 99.1 9E-10 3.1E-14 59.7 7.5 57 1-57 154-212 (337)
71 3v7d_B Cell division control p 99.1 5.3E-10 1.8E-14 63.5 6.8 58 1-58 281-340 (464)
72 2j04_B YDR362CP, TAU91; beta p 99.1 2.9E-10 1E-14 66.7 5.5 56 2-57 369-426 (524)
73 2oaj_A Protein SNI1; WD40 repe 99.1 3.4E-10 1.2E-14 69.6 5.9 56 1-57 501-603 (902)
74 3odt_A Protein DOA1; ubiquitin 99.1 2.8E-09 9.4E-14 57.4 8.8 60 2-61 238-298 (313)
75 1pgu_A Actin interacting prote 99.1 5E-10 1.7E-14 65.0 6.0 59 1-59 501-572 (615)
76 1pgu_A Actin interacting prote 99.0 9.7E-10 3.3E-14 63.8 7.2 57 1-58 554-613 (615)
77 3jrp_A Fusion protein of prote 99.0 9.8E-10 3.4E-14 60.4 6.8 59 1-59 70-134 (379)
78 3zwl_B Eukaryotic translation 99.0 1.5E-09 5.2E-14 59.4 7.5 58 1-58 188-248 (369)
79 1sq9_A Antiviral protein SKI8; 99.0 9.1E-10 3.1E-14 61.2 6.6 57 1-57 304-393 (397)
80 4a11_B DNA excision repair pro 99.0 5.5E-10 1.9E-14 61.9 5.7 57 3-59 307-365 (408)
81 3mkq_A Coatomer beta'-subunit; 99.0 7.9E-10 2.7E-14 66.2 6.5 58 1-58 26-85 (814)
82 2j04_B YDR362CP, TAU91; beta p 99.0 6.2E-10 2.1E-14 65.4 5.9 59 2-60 279-341 (524)
83 3dwl_C Actin-related protein 2 99.0 6.1E-11 2.1E-15 65.7 1.5 59 1-59 24-86 (377)
84 1k8k_C P40, ARP2/3 complex 41 99.0 4.8E-10 1.6E-14 61.7 5.0 58 1-58 21-82 (372)
85 3mkq_A Coatomer beta'-subunit; 99.0 1.4E-09 4.9E-14 65.1 7.3 59 1-59 68-128 (814)
86 2pm9_A Protein WEB1, protein t 99.0 1.5E-09 5E-14 60.6 6.8 59 2-60 81-144 (416)
87 3mmy_A MRNA export factor; mRN 99.0 2.9E-09 9.9E-14 58.2 7.9 56 1-57 99-158 (368)
88 3dwl_C Actin-related protein 2 99.0 2.8E-10 9.7E-15 63.0 3.9 59 1-59 68-131 (377)
89 3ei3_B DNA damage-binding prot 99.0 1.8E-09 6.1E-14 60.1 7.1 57 1-58 176-235 (383)
90 2w18_A PALB2, fancn, partner a 99.0 2.9E-09 9.9E-14 60.4 7.8 45 2-46 195-242 (356)
91 1sq9_A Antiviral protein SKI8; 99.0 8.3E-10 2.8E-14 61.3 5.5 57 1-57 246-320 (397)
92 3jrp_A Fusion protein of prote 99.0 4E-10 1.4E-14 62.0 4.2 59 1-59 24-88 (379)
93 3vu4_A KMHSV2; beta-propeller 99.0 8.7E-10 3E-14 61.4 5.4 53 6-58 155-226 (355)
94 4aez_A CDC20, WD repeat-contai 99.0 2.4E-09 8.4E-14 60.1 7.0 58 1-58 187-247 (401)
95 3ei3_B DNA damage-binding prot 99.0 2.6E-09 8.8E-14 59.4 6.7 56 2-58 219-281 (383)
96 2vdu_B TRNA (guanine-N(7)-)-me 99.0 1.6E-09 5.5E-14 61.7 5.9 57 2-59 212-271 (450)
97 2j04_A TAU60, YPL007P, hypothe 99.0 8.5E-09 2.9E-13 61.6 8.6 61 1-62 142-214 (588)
98 3dw8_B Serine/threonine-protei 98.9 3.3E-09 1.1E-13 59.7 6.5 58 1-58 240-314 (447)
99 3dw8_B Serine/threonine-protei 98.9 2.5E-09 8.4E-14 60.2 5.9 58 1-58 41-125 (447)
100 3gre_A Serine/threonine-protei 98.9 1.8E-09 6.1E-14 60.9 5.3 60 1-60 227-291 (437)
101 4a11_B DNA excision repair pro 98.9 3.6E-09 1.2E-13 58.6 6.5 57 2-58 158-217 (408)
102 2ovr_B FBW7, F-BOX/WD repeat p 98.9 8.6E-09 2.9E-13 58.5 8.1 59 1-59 373-442 (445)
103 1yfq_A Cell cycle arrest prote 98.9 1.1E-08 3.6E-13 55.8 8.1 61 1-61 24-91 (342)
104 1k8k_C P40, ARP2/3 complex 41 98.9 4.7E-09 1.6E-13 57.7 6.7 57 1-57 155-231 (372)
105 1r5m_A SIR4-interacting protei 98.9 3.7E-09 1.3E-13 58.8 6.3 57 2-58 302-360 (425)
106 1r5m_A SIR4-interacting protei 98.9 6.2E-09 2.1E-13 57.9 7.2 57 1-58 121-179 (425)
107 2xyi_A Probable histone-bindin 98.9 5.9E-09 2E-13 59.2 6.9 57 2-58 246-308 (430)
108 1yfq_A Cell cycle arrest prote 98.9 3.5E-09 1.2E-13 57.7 5.8 58 1-58 207-281 (342)
109 1p22_A F-BOX/WD-repeat protein 98.9 5E-09 1.7E-13 59.4 6.5 57 1-59 144-202 (435)
110 3sfz_A APAF-1, apoptotic pepti 98.9 6E-09 2.1E-13 64.9 7.2 56 2-57 715-772 (1249)
111 1gxr_A ESG1, transducin-like e 98.9 7.9E-09 2.7E-13 56.0 6.9 58 1-58 110-171 (337)
112 4aez_A CDC20, WD repeat-contai 98.9 1.5E-08 5.2E-13 56.9 8.2 58 1-58 230-292 (401)
113 3i2n_A WD repeat-containing pr 98.9 2E-09 6.7E-14 58.9 4.5 58 2-59 82-148 (357)
114 3jro_A Fusion protein of prote 98.9 7E-09 2.4E-13 62.7 7.0 59 1-59 68-132 (753)
115 2oaj_A Protein SNI1; WD40 repe 98.9 5.2E-09 1.8E-13 64.5 6.5 57 2-59 71-129 (902)
116 4e54_B DNA damage-binding prot 98.9 3.6E-08 1.2E-12 56.0 9.6 65 1-65 178-246 (435)
117 4h5i_A Guanine nucleotide-exch 98.9 2.1E-08 7.2E-13 56.1 8.0 51 4-55 151-202 (365)
118 2ovr_B FBW7, F-BOX/WD repeat p 98.9 2.5E-08 8.7E-13 56.5 8.3 55 2-58 131-187 (445)
119 2vdu_B TRNA (guanine-N(7)-)-me 98.9 9.3E-09 3.2E-13 58.6 6.3 58 3-60 118-179 (450)
120 3jro_A Fusion protein of prote 98.8 3E-09 1E-13 64.2 4.1 59 1-59 22-86 (753)
121 1p22_A F-BOX/WD-repeat protein 98.8 4.3E-08 1.5E-12 55.6 8.6 57 1-59 184-242 (435)
122 2xyi_A Probable histone-bindin 98.8 5.7E-09 2E-13 59.3 4.4 58 2-59 143-213 (430)
123 2j04_A TAU60, YPL007P, hypothe 98.7 1.3E-07 4.3E-12 56.7 7.8 57 2-61 99-162 (588)
124 1l0q_A Surface layer protein; 98.6 2.3E-07 8E-12 51.5 6.6 56 2-58 4-62 (391)
125 2oit_A Nucleoporin 214KDA; NH2 98.5 8.2E-09 2.8E-13 59.2 -0.1 53 5-57 113-179 (434)
126 3bws_A Protein LP49; two-domai 98.5 3.1E-07 1.1E-11 51.6 6.3 56 2-57 183-241 (433)
127 3bws_A Protein LP49; two-domai 98.5 1.5E-07 5.1E-12 52.9 3.5 57 2-58 136-199 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 98.4 4.6E-06 1.6E-10 47.5 8.1 58 2-60 192-255 (415)
129 1l0q_A Surface layer protein; 98.3 3.3E-06 1.1E-10 46.9 6.5 55 3-58 47-104 (391)
130 1xip_A Nucleoporin NUP159; bet 98.3 1.3E-06 4.6E-11 50.0 4.5 55 3-61 139-193 (388)
131 1k32_A Tricorn protease; prote 98.2 4.6E-06 1.6E-10 52.0 6.7 48 1-48 391-438 (1045)
132 3no2_A Uncharacterized protein 98.2 1.3E-05 4.6E-10 43.6 7.4 56 2-57 7-63 (276)
133 1pby_B Quinohemoprotein amine 98.2 9.7E-06 3.3E-10 43.9 6.8 56 2-57 3-63 (337)
134 2ojh_A Uncharacterized protein 98.2 1.2E-05 4.2E-10 42.5 7.1 53 6-59 18-71 (297)
135 1nir_A Nitrite reductase; hemo 98.2 5.9E-06 2E-10 48.8 6.1 55 2-57 151-207 (543)
136 3o4h_A Acylamino-acid-releasin 98.1 6.3E-06 2.2E-10 48.3 5.4 58 2-60 163-226 (582)
137 2hqs_A Protein TOLB; TOLB, PAL 98.1 5.9E-06 2E-10 47.0 4.8 39 10-49 159-197 (415)
138 3u4y_A Uncharacterized protein 98.1 2.7E-05 9.4E-10 42.3 7.0 57 2-59 12-69 (331)
139 1jmx_B Amine dehydrogenase; ox 98.0 5.4E-05 1.9E-09 41.2 7.3 56 2-57 13-72 (349)
140 2ojh_A Uncharacterized protein 98.0 1.9E-05 6.5E-10 41.8 5.0 58 2-60 55-118 (297)
141 1xfd_A DIP, dipeptidyl aminope 97.9 8.8E-06 3E-10 48.5 3.3 42 7-48 34-78 (723)
142 1nir_A Nitrite reductase; hemo 97.9 5E-05 1.7E-09 44.9 6.3 56 1-57 191-255 (543)
143 1z68_A Fibroblast activation p 97.9 2.2E-05 7.4E-10 47.0 4.7 57 4-60 30-98 (719)
144 2ecf_A Dipeptidyl peptidase IV 97.9 0.00015 5.3E-09 43.4 8.4 60 1-60 49-139 (741)
145 2ecf_A Dipeptidyl peptidase IV 97.8 5E-05 1.7E-09 45.5 5.6 56 2-58 122-180 (741)
146 1jmx_B Amine dehydrogenase; ox 97.8 0.00011 3.9E-09 39.9 6.0 53 3-58 270-324 (349)
147 3u4y_A Uncharacterized protein 97.8 0.00021 7.3E-09 38.8 7.0 45 4-48 56-101 (331)
148 3vgz_A Uncharacterized protein 97.7 0.00046 1.6E-08 37.6 7.8 56 2-57 198-260 (353)
149 1pby_B Quinohemoprotein amine 97.7 0.00058 2E-08 36.9 8.0 50 8-58 113-162 (337)
150 3vgz_A Uncharacterized protein 97.7 0.00025 8.6E-09 38.7 6.5 52 8-59 162-213 (353)
151 1k32_A Tricorn protease; prote 97.7 0.00043 1.5E-08 43.5 7.9 57 2-60 26-88 (1045)
152 3hfq_A Uncharacterized protein 97.7 0.0007 2.4E-08 37.1 8.1 57 4-60 256-318 (347)
153 1ri6_A Putative isomerase YBHE 97.6 0.00012 4.2E-09 39.6 4.8 56 3-58 8-68 (343)
154 3scy_A Hypothetical bacterial 97.6 0.0016 5.4E-08 36.0 8.7 58 2-60 272-338 (361)
155 1ri6_A Putative isomerase YBHE 97.5 0.0005 1.7E-08 37.2 6.5 55 4-59 247-308 (343)
156 2dg1_A DRP35, lactonase; beta 97.5 0.0013 4.4E-08 35.9 8.0 47 3-49 59-105 (333)
157 4a5s_A Dipeptidyl peptidase 4 97.5 0.00027 9.3E-09 42.8 5.6 48 10-58 92-140 (740)
158 3pe7_A Oligogalacturonate lyas 97.5 0.00023 7.7E-09 39.5 4.9 56 2-57 49-109 (388)
159 3e5z_A Putative gluconolactona 97.5 0.0012 4E-08 35.6 7.2 54 2-57 42-97 (296)
160 2z3z_A Dipeptidyl aminopeptida 97.4 0.001 3.5E-08 39.8 7.2 50 8-58 99-149 (706)
161 4a5s_A Dipeptidyl peptidase 4 97.4 0.0003 1E-08 42.7 4.5 47 2-50 30-81 (740)
162 3o4h_A Acylamino-acid-releasin 97.3 0.00027 9.3E-09 41.5 4.1 55 2-57 208-274 (582)
163 2oiz_A Aromatic amine dehydrog 97.3 0.00089 3E-08 37.6 6.0 47 10-58 286-333 (361)
164 1xfd_A DIP, dipeptidyl aminope 97.3 0.00028 9.4E-09 42.2 3.9 55 2-57 74-141 (723)
165 3azo_A Aminopeptidase; POP fam 97.3 0.0016 5.5E-08 38.7 6.9 49 11-59 218-272 (662)
166 3hfq_A Uncharacterized protein 97.3 0.00091 3.1E-08 36.7 5.6 57 2-58 99-170 (347)
167 1z68_A Fibroblast activation p 97.2 0.00042 1.4E-08 41.5 4.1 47 9-58 89-138 (719)
168 2hz6_A Endoplasmic reticulum t 97.2 0.00087 3E-08 37.8 5.1 55 2-58 11-65 (369)
169 2z3z_A Dipeptidyl aminopeptida 97.1 0.0012 4E-08 39.6 5.3 59 2-60 325-390 (706)
170 1q7f_A NHL, brain tumor CG1071 97.1 0.008 2.7E-07 32.1 8.2 56 2-58 220-279 (286)
171 3fvz_A Peptidyl-glycine alpha- 97.0 0.00079 2.7E-08 37.1 3.6 52 9-60 267-321 (329)
172 3fvz_A Peptidyl-glycine alpha- 96.9 0.011 3.8E-07 32.5 7.8 49 10-58 69-120 (329)
173 1qks_A Cytochrome CD1 nitrite 96.9 0.0058 2E-07 36.7 6.7 57 2-59 169-225 (567)
174 1pjx_A Dfpase, DIISOPROPYLFLUO 96.9 0.015 5.2E-07 31.2 8.3 57 3-59 240-299 (314)
175 1xip_A Nucleoporin NUP159; bet 96.8 0.011 3.8E-07 34.1 7.4 56 2-58 99-154 (388)
176 3scy_A Hypothetical bacterial 96.8 0.0042 1.4E-07 34.3 5.2 57 2-58 224-290 (361)
177 1jof_A Carboxy-CIS,CIS-muconat 96.7 0.017 5.7E-07 32.2 7.5 51 8-58 117-175 (365)
178 1jof_A Carboxy-CIS,CIS-muconat 96.6 0.03 1E-06 31.1 8.5 58 2-59 158-224 (365)
179 3no2_A Uncharacterized protein 96.6 0.025 8.6E-07 30.7 7.4 48 2-51 138-185 (276)
180 3pe7_A Oligogalacturonate lyas 96.5 0.0068 2.3E-07 33.5 5.1 53 7-60 317-383 (388)
181 3dsm_A Uncharacterized protein 96.5 0.0094 3.2E-07 32.9 5.4 54 3-57 57-112 (328)
182 3e5z_A Putative gluconolactona 96.5 0.031 1E-06 30.0 7.2 58 3-60 186-247 (296)
183 1q7f_A NHL, brain tumor CG1071 96.4 0.03 1E-06 29.8 6.8 55 3-58 178-237 (286)
184 1rwi_B Serine/threonine-protei 96.4 0.022 7.7E-07 29.9 6.3 55 3-57 206-262 (270)
185 3azo_A Aminopeptidase; POP fam 96.3 0.0031 1.1E-07 37.5 2.9 58 2-60 143-225 (662)
186 2oiz_A Aromatic amine dehydrog 96.3 0.022 7.4E-07 32.0 6.2 41 2-43 318-360 (361)
187 2gop_A Trilobed protease; beta 96.1 0.029 1E-06 30.6 5.8 36 11-48 86-121 (347)
188 2xdw_A Prolyl endopeptidase; a 96.0 0.012 4.1E-07 35.6 4.3 37 11-48 152-188 (710)
189 3g4e_A Regucalcin; six bladed 96.0 0.074 2.5E-06 28.8 7.5 56 3-60 28-83 (297)
190 2bkl_A Prolyl endopeptidase; m 95.9 0.036 1.2E-06 33.5 6.2 58 2-59 181-259 (695)
191 3c5m_A Oligogalacturonate lyas 95.9 0.017 5.9E-07 31.8 4.5 46 11-57 61-109 (396)
192 1qks_A Cytochrome CD1 nitrite 95.8 0.043 1.5E-06 33.0 6.0 54 1-55 209-271 (567)
193 2bkl_A Prolyl endopeptidase; m 95.7 0.0041 1.4E-07 37.5 1.6 44 5-48 142-185 (695)
194 1rwi_B Serine/threonine-protei 95.7 0.054 1.8E-06 28.5 5.8 56 3-58 164-221 (270)
195 2xdw_A Prolyl endopeptidase; a 95.5 0.062 2.1E-06 32.6 6.1 49 12-60 210-267 (710)
196 2gop_A Trilobed protease; beta 95.5 0.065 2.2E-06 29.2 5.8 54 2-58 275-330 (347)
197 3g4e_A Regucalcin; six bladed 95.3 0.11 3.8E-06 28.1 6.2 45 3-47 213-259 (297)
198 3dr2_A Exported gluconolactona 95.3 0.15 5.2E-06 27.6 7.2 55 2-58 59-115 (305)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 95.0 0.11 3.8E-06 27.8 5.7 52 6-58 42-100 (314)
200 2dg1_A DRP35, lactonase; beta 94.9 0.2 7E-06 27.1 8.6 51 10-60 112-170 (333)
201 1yiq_A Quinohemoprotein alcoho 94.9 0.16 5.4E-06 31.2 6.5 45 2-46 488-533 (689)
202 2mad_H Methylamine dehydrogena 94.7 0.28 9.6E-06 27.8 7.6 51 10-61 298-350 (373)
203 2hz6_A Endoplasmic reticulum t 94.7 0.01 3.5E-07 33.5 1.1 54 3-60 95-148 (369)
204 3c5m_A Oligogalacturonate lyas 94.7 0.18 6E-06 27.8 6.0 51 9-60 319-383 (396)
205 2ghs_A AGR_C_1268P; regucalcin 94.6 0.27 9.1E-06 27.1 7.0 54 3-58 64-117 (326)
206 3sjl_D Methylamine dehydrogena 94.6 0.33 1.1E-05 28.1 7.2 38 9-48 58-95 (386)
207 3nol_A Glutamine cyclotransfer 94.5 0.1 3.5E-06 28.8 4.6 57 4-63 101-157 (262)
208 3c75_H MADH, methylamine dehyd 94.4 0.29 1E-05 28.6 6.6 52 10-63 99-160 (426)
209 3dsm_A Uncharacterized protein 94.3 0.32 1.1E-05 26.8 9.3 48 10-57 203-251 (328)
210 1mda_H Methylamine dehydrogena 94.1 0.44 1.5E-05 27.3 7.2 50 11-62 47-106 (368)
211 3nok_A Glutaminyl cyclase; bet 94.0 0.27 9.2E-06 27.2 5.6 58 3-63 109-166 (268)
212 2mad_H Methylamine dehydrogena 93.8 0.47 1.6E-05 26.9 7.2 36 11-48 48-83 (373)
213 3mbr_X Glutamine cyclotransfer 93.8 0.21 7.2E-06 27.2 5.0 58 4-64 79-136 (243)
214 1yr2_A Prolyl oligopeptidase; 93.0 0.35 1.2E-05 29.6 5.5 37 11-47 244-284 (741)
215 2iwa_A Glutamine cyclotransfer 92.9 0.33 1.1E-05 26.7 4.9 59 3-63 79-137 (266)
216 3hrp_A Uncharacterized protein 92.8 0.45 1.5E-05 27.3 5.5 54 3-58 145-200 (409)
217 3hrp_A Uncharacterized protein 92.6 0.81 2.8E-05 26.2 7.6 56 3-58 233-295 (409)
218 2z2n_A Virginiamycin B lyase; 92.6 0.59 2E-05 24.6 7.0 52 4-57 30-85 (299)
219 2z2n_A Virginiamycin B lyase; 92.3 0.67 2.3E-05 24.4 6.9 53 3-56 113-168 (299)
220 3sjl_D Methylamine dehydrogena 92.3 0.27 9.3E-06 28.4 4.2 52 9-60 108-168 (386)
221 1flg_A Protein (quinoprotein e 91.7 1.1 3.7E-05 27.1 6.4 45 2-46 499-544 (582)
222 1mda_H Methylamine dehydrogena 91.4 0.38 1.3E-05 27.5 4.2 40 9-48 95-141 (368)
223 1kb0_A Quinohemoprotein alcoho 91.3 1.3 4.4E-05 27.3 6.5 44 2-45 490-534 (677)
224 3q7m_A Lipoprotein YFGL, BAMB; 90.6 1.3 4.5E-05 24.5 6.5 27 2-28 320-346 (376)
225 3nok_A Glutaminyl cyclase; bet 90.6 0.46 1.6E-05 26.3 3.8 59 2-63 67-127 (268)
226 2qe8_A Uncharacterized protein 90.0 1.5 5E-05 24.2 6.5 47 3-49 262-309 (343)
227 1yr2_A Prolyl oligopeptidase; 90.0 0.61 2.1E-05 28.6 4.4 58 2-59 376-439 (741)
228 2ghs_A AGR_C_1268P; regucalcin 89.6 1.6 5.4E-05 24.0 6.9 44 4-48 245-290 (326)
229 2qc5_A Streptogramin B lactona 89.5 1.4 4.8E-05 23.2 7.0 54 4-58 35-91 (300)
230 2qc5_A Streptogramin B lactona 88.5 1.7 5.7E-05 22.9 7.0 53 4-58 77-133 (300)
231 2ece_A 462AA long hypothetical 88.3 2.8 9.5E-05 25.1 6.4 40 10-49 164-206 (462)
232 3nol_A Glutamine cyclotransfer 87.8 2.2 7.7E-05 23.5 6.3 60 3-63 56-118 (262)
233 3c75_H MADH, methylamine dehyd 86.3 1 3.5E-05 26.4 3.6 46 10-56 350-399 (426)
234 2ad6_A Methanol dehydrogenase 86.3 3.9 0.00013 24.7 6.5 45 2-46 477-522 (571)
235 1w6s_A Methanol dehydrogenase 84.7 5 0.00017 24.5 6.5 43 2-44 486-529 (599)
236 3q7m_A Lipoprotein YFGL, BAMB; 84.5 3.6 0.00012 22.8 7.0 28 2-29 105-132 (376)
237 3f7f_A Nucleoporin NUP120; nuc 84.5 2.3 7.8E-05 27.0 4.6 26 1-26 232-257 (729)
238 4fhn_B Nucleoporin NUP120; pro 83.1 2.4 8.3E-05 27.7 4.5 24 2-25 251-274 (1139)
239 3iuj_A Prolyl endopeptidase; h 82.8 5.9 0.0002 24.2 5.9 36 11-46 209-249 (693)
240 1yiq_A Quinohemoprotein alcoho 82.6 1.8 6.1E-05 26.7 3.6 49 9-58 454-502 (689)
241 4gq2_M Nucleoporin NUP120; bet 81.8 3.2 0.00011 26.8 4.6 23 2-24 249-271 (950)
242 3hxj_A Pyrrolo-quinoline quino 80.6 4.9 0.00017 21.5 7.4 54 2-56 109-163 (330)
243 3hxj_A Pyrrolo-quinoline quino 80.5 4.9 0.00017 21.5 7.0 52 3-55 268-320 (330)
244 2qe8_A Uncharacterized protein 80.5 5.4 0.00019 22.0 6.2 40 9-48 92-138 (343)
245 3mbr_X Glutamine cyclotransfer 80.3 5.3 0.00018 21.7 7.1 60 3-63 34-96 (243)
246 1kv9_A Type II quinohemoprotei 80.1 8.1 0.00028 23.8 6.5 28 2-29 471-498 (668)
247 3dr2_A Exported gluconolactona 78.3 6.1 0.00021 21.3 5.5 50 10-60 215-268 (305)
248 3tc9_A Hypothetical hydrolase; 76.4 8.9 0.0003 22.2 6.9 49 8-56 246-296 (430)
249 3qqz_A Putative uncharacterize 76.4 7.3 0.00025 21.2 7.0 54 3-58 188-250 (255)
250 3amr_A 3-phytase; beta-propell 75.7 8.1 0.00028 22.4 4.7 58 2-60 145-209 (355)
251 2ece_A 462AA long hypothetical 74.9 10 0.00034 22.8 5.0 45 3-48 99-154 (462)
252 2fp8_A Strictosidine synthase; 73.5 8.9 0.0003 20.8 4.5 38 10-48 165-203 (322)
253 3kya_A Putative phosphatase; s 72.7 12 0.0004 22.6 5.0 25 32-56 311-336 (496)
254 1kb0_A Quinohemoprotein alcoho 72.2 4.6 0.00016 24.9 3.3 18 10-27 457-474 (677)
255 2iwa_A Glutamine cyclotransfer 67.8 13 0.00045 20.4 5.8 45 3-48 119-168 (266)
256 1npe_A Nidogen, entactin; glyc 64.5 14 0.00046 19.4 6.3 51 8-58 56-109 (267)
257 4hw6_A Hypothetical protein, I 63.8 19 0.00065 20.9 6.3 49 8-56 248-299 (433)
258 1fwx_A Nitrous oxide reductase 63.5 16 0.00056 22.7 4.4 55 3-58 292-360 (595)
259 2p4o_A Hypothetical protein; p 59.6 19 0.00064 19.4 6.5 40 7-48 50-89 (306)
260 2be1_A Serine/threonine-protei 59.1 23 0.00078 20.2 4.6 27 2-28 12-38 (339)
261 3iuj_A Prolyl endopeptidase; h 58.3 29 0.001 21.3 6.4 37 10-48 305-343 (693)
262 1flg_A Protein (quinoprotein e 58.2 20 0.00069 21.8 4.2 26 2-27 338-363 (582)
263 4a2l_A BT_4663, two-component 39.3 69 0.0024 20.0 8.4 55 3-58 420-479 (795)
264 4hw6_A Hypothetical protein, I 38.4 59 0.002 18.9 7.3 38 10-48 162-199 (433)
265 3sbq_A Nitrous-oxide reductase 38.3 33 0.0011 21.7 2.9 25 3-27 73-97 (638)
266 2p9w_A MAL S 1 allergenic prot 35.6 64 0.0022 18.6 5.6 28 33-60 187-214 (334)
267 3sre_A PON1, serum paraoxonase 35.3 22 0.00074 20.4 1.8 27 33-59 223-250 (355)
268 1uhe_A Aspartate 1-decarboxyla 34.0 41 0.0014 15.8 4.1 26 11-36 18-45 (97)
269 3ei3_A DNA damage-binding prot 32.7 1.2E+02 0.0039 20.6 6.7 50 9-60 863-914 (1158)
270 3v64_C Agrin; beta propeller, 29.0 80 0.0027 17.6 6.7 48 10-57 138-187 (349)
271 3qhy_B Beta-lactamase inhibito 28.7 76 0.0026 17.3 4.5 50 8-58 196-245 (282)
272 2g8s_A Glucose/sorbosone dehyd 28.7 82 0.0028 17.6 6.8 48 9-56 298-349 (353)
273 1n7d_A LDL receptor, low-densi 27.6 1E+02 0.0034 19.3 3.8 50 9-58 474-525 (699)
274 1ijq_A LDL receptor, low-densi 21.4 1.1E+02 0.0038 16.6 7.0 40 9-48 98-138 (316)
275 3m0c_C LDL receptor, low-densi 21.1 1.8E+02 0.006 18.8 7.0 41 8-48 491-532 (791)
276 3v65_B Low-density lipoprotein 20.9 1.3E+02 0.0043 17.1 6.6 40 9-48 137-177 (386)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.51 E-value=7.4e-14 Score=78.17 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=49.5
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEE-eCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASW-MSFDTEPPVIKWTPGSLMFVTGS--SELSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~ 57 (69)
++|++|+.|+.|++||+.+++.+..+ .+|...|.+++|+|++.+++|++ ..+++|..
T Consensus 282 ~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 282 ELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 47899999999999999999887765 78999999999999999999884 45777753
No 2
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.45 E-value=3.7e-13 Score=72.81 Aligned_cols=58 Identities=9% Similarity=0.137 Sum_probs=46.8
Q ss_pred EEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCCC
Q 035275 4 ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSK 61 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~~ 61 (69)
++|+.|+.|++||+.+++.+..+.+|.+.|.+++|+|++.+++|++.|..+.+||+.+
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 3455899999999999998999999999999999999999999886553333344443
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.38 E-value=2.6e-12 Score=70.16 Aligned_cols=58 Identities=19% Similarity=0.397 Sum_probs=50.9
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~~ 59 (69)
++++|+.|+.|++||+.++..+..+.+|...|.++.|+|++..+++++ ..+++|....
T Consensus 200 ~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 200 YMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 689999999999999999988888999999999999999999998884 4577776543
No 4
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.37 E-value=1.8e-12 Score=73.24 Aligned_cols=55 Identities=13% Similarity=0.269 Sum_probs=45.0
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCe-EEEEcCCCcEEEEcCCc--EEEEc
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPP-VIKWTPGSLMFVTGSSE--LSFWI 56 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~-~v~~~~~~~~~~s~~~~--~~~~~ 56 (69)
++++++.|++|++||+.+++.+..+.+|...+. +++|+|++.++++++.| +++|.
T Consensus 297 ~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 478999999999999999998888988877654 68999999999998554 66664
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.36 E-value=1e-11 Score=68.28 Aligned_cols=59 Identities=17% Similarity=0.398 Sum_probs=51.5
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~~ 59 (69)
+++++++.|+.|++||+.+++....+.+|...|.+++|+|++.++++++ ..+++|..+.
T Consensus 78 ~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 78 AYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS
T ss_pred CEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 3689999999999999999988888999999999999999999988874 4588886543
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.36 E-value=2.6e-12 Score=70.17 Aligned_cols=58 Identities=19% Similarity=0.334 Sum_probs=50.8
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
+++++|+.|+.|++||+.+++.+..+.+|.+.|.+++|+|++..+++++ ..+++|.++
T Consensus 68 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~ 127 (304)
T 2ynn_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (304)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGG
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECC
Confidence 3689999999999999999998888999999999999999999988874 457777654
No 7
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.36 E-value=6e-12 Score=70.11 Aligned_cols=58 Identities=17% Similarity=0.218 Sum_probs=49.5
Q ss_pred CEEEEEeCCCc-EEEEECCCCceEEEEe-C-CCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 1 MFVISGSGDGS-VYAWSVRSGKEVASWM-S-FDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~-v~~wd~~~~~~~~~~~-~-~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
+++++|+.|++ |++||+.+++.+..+. + |.+.|.+++|+|++..+++++. .+++|..+
T Consensus 208 ~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 208 DMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp SEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 36899999998 9999999998888886 5 9999999999999999988754 47777543
No 8
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.36 E-value=6.1e-12 Score=71.12 Aligned_cols=51 Identities=14% Similarity=0.319 Sum_probs=44.7
Q ss_pred EeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEc
Q 035275 6 GSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWI 56 (69)
Q Consensus 6 ~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~ 56 (69)
|+.|+.|.+||+.++..+..+.+|.+.|.+++|+|++..++|++ +.+++|.
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 34789999999999998999999999999999999999999874 4577774
No 9
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.34 E-value=5.5e-12 Score=69.74 Aligned_cols=57 Identities=21% Similarity=0.471 Sum_probs=50.1
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~ 58 (69)
++++++.|+.|++||+.+++.+..+.+|.+.|.+++|+|++..++++ |..+++|...
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 68999999999999999998888899999999999999999888887 4557887653
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.33 E-value=8.2e-12 Score=68.85 Aligned_cols=58 Identities=19% Similarity=0.381 Sum_probs=50.6
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCc--EEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~~ 58 (69)
+++++|+.||.|++||+.+++.+..+.+|...|.+++|+|++..+++++.+ +++|..+
T Consensus 177 ~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~ 236 (321)
T 3ow8_A 177 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 236 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC
Confidence 468999999999999999998888899999999999999999999988554 7777544
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.33 E-value=3.7e-12 Score=71.05 Aligned_cols=58 Identities=19% Similarity=0.170 Sum_probs=47.1
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCC-cEEEEcC--CcEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS-LMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~--~~~~~~~~~~ 59 (69)
++++|+.||.|++||+.+++.+..+.+|...|.+++|+|++ .++++++ ..+++|..+.
T Consensus 229 ~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 229 VFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp EEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred ceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 68899999999999999998888899999999999999987 5677774 4577775443
No 12
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.31 E-value=1.6e-11 Score=71.06 Aligned_cols=59 Identities=15% Similarity=0.308 Sum_probs=50.0
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPDLS 60 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~~~ 60 (69)
+++++|+.|+.|++||. +++.+..+.+|.+.|.+++|+|++.++++++ ..+++|..+.+
T Consensus 29 ~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~~ 89 (577)
T 2ymu_A 29 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ 89 (577)
T ss_dssp SCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC
T ss_pred CEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 46899999999999996 6777888999999999999999999999874 45888875443
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.31 E-value=9.9e-12 Score=68.53 Aligned_cols=58 Identities=16% Similarity=0.320 Sum_probs=50.3
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
+++++++.|+.|++||+.++.....+.+|...|.+++|+|++..+++++ ..+++|..+
T Consensus 219 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 219 QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp CEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 3689999999999999998888888899999999999999999888874 457777654
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.30 E-value=5.4e-12 Score=70.42 Aligned_cols=55 Identities=18% Similarity=0.147 Sum_probs=45.6
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcC-CCcEEEEc--CCcEEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP-GSLMFVTG--SSELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~--~~~~~~~~~ 57 (69)
+|++|+.|+.|++||+.+++.+ ...+|.+.|.+++|+| ++..++++ |..+++|..
T Consensus 284 ~lasgs~D~~i~iwd~~~~~~~-~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 284 FLASISEDCTVAVLDADFSEVF-RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp CEEEEETTSCEEEECTTSCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred EEEEEeCCCEEEEEECCCCcEe-EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 6899999999999999888754 4458999999999998 68888887 456777754
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.30 E-value=1.8e-11 Score=69.27 Aligned_cols=57 Identities=21% Similarity=0.434 Sum_probs=49.7
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
++++|+.|+.|++||+.++..+..+.+|...|.++.|+|++..+++++. .+++|...
T Consensus 310 ~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred EEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 6899999999999999999888888999999999999999988888754 47777543
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.30 E-value=1.3e-11 Score=68.76 Aligned_cols=57 Identities=21% Similarity=0.462 Sum_probs=49.8
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
++++|+.||.|++||++++..+..+.+|...|.+++|+|++..+++++ ..+++|...
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~ 270 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR 270 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 689999999999999999988888899999999999999999999884 457777543
No 17
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.30 E-value=1.4e-11 Score=68.76 Aligned_cols=58 Identities=16% Similarity=0.352 Sum_probs=49.2
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCC-cEEEEc--CCcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS-LMFVTG--SSELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~--~~~~~~~~~~ 58 (69)
++|++|+.|+.|++||+.+++.+..+.+|.+.|.++.|+|++ .+++++ |..+++|..+
T Consensus 140 ~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~ 200 (344)
T 4gqb_B 140 TQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTR 200 (344)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccc
Confidence 468999999999999999999888999999999999999987 466776 4557777544
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.30 E-value=1.1e-11 Score=68.50 Aligned_cols=55 Identities=18% Similarity=0.328 Sum_probs=48.7
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEE
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFW 55 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~ 55 (69)
+++++|+.|+.|++||..++.....+.+|.+.|.+++|+|++..+++++. .+++|
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 36899999999999999988888889999999999999999998888854 47776
No 19
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.29 E-value=4.6e-12 Score=71.68 Aligned_cols=57 Identities=14% Similarity=0.298 Sum_probs=49.9
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
++++|+.||.|++||+.++.....+.+|.+.|.+++|+|++..+++++ ..+++|..+
T Consensus 122 ~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp EEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 689999999999999999988888999999999999999999998874 457777544
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.29 E-value=1.8e-11 Score=68.15 Aligned_cols=55 Identities=22% Similarity=0.533 Sum_probs=48.5
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCc--EEEE
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFW 55 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~ 55 (69)
+++++|+.|+.|++||+.++..+..+.+|...|.+++|+|++..+++++.+ +++|
T Consensus 297 ~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 297 RLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 368999999999999999988888889999999999999999999988554 6666
No 21
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.3e-11 Score=68.13 Aligned_cols=58 Identities=10% Similarity=0.153 Sum_probs=48.2
Q ss_pred CEEEEEeCCCcEEEEECCCCceE-EEEeC-CCCCCeEEEEcCCCcEEEEcC-CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEV-ASWMS-FDTEPPVIKWTPGSLMFVTGS-SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~-~~~~~-~~~~v~~v~~~~~~~~~~s~~-~~~~~~~~~ 58 (69)
+++++|+.||.|++||+.++... ..+.. |.+.|.+++|+|++..+++++ ..+++|..+
T Consensus 183 ~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~ 243 (343)
T 3lrv_A 183 LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLR 243 (343)
T ss_dssp CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETT
T ss_pred CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcC
Confidence 36889999999999999988766 67777 999999999999999888874 456676543
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.29 E-value=1.6e-11 Score=67.86 Aligned_cols=57 Identities=25% Similarity=0.427 Sum_probs=50.0
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
++++|+.|+.|++||+.++.....+.+|...|.+++|+|++..+++++ ..+++|..+
T Consensus 198 ~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~ 256 (340)
T 1got_B 198 LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256 (340)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 689999999999999999988888899999999999999999998884 457777654
No 23
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.28 E-value=1.4e-11 Score=69.09 Aligned_cols=57 Identities=26% Similarity=0.441 Sum_probs=47.8
Q ss_pred EEEEEeCCCcEEEEECCC-CceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRS-GKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~-~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
++++|+.|+.|++||++. +..+..+.+|.+.|.+++|+|++..+++++. .+++|...
T Consensus 220 ~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 220 MFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp EEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred EEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 689999999999999974 4556778899999999999999999999855 46776543
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.28 E-value=2.3e-11 Score=68.39 Aligned_cols=57 Identities=19% Similarity=0.404 Sum_probs=49.2
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~ 57 (69)
+++++|+.|+.|++||+.+++....+.+|...|.+++|+|++..+++++. .+++|..
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~ 194 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL 194 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEEC
Confidence 36899999999999999998888888999999999999999998888754 4666654
No 25
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.26 E-value=3.5e-11 Score=66.13 Aligned_cols=57 Identities=16% Similarity=0.368 Sum_probs=49.1
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCc--EEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~~ 58 (69)
.+++++.|+.|++||+.+......+.+|...|.+++|+|++..+++++.+ +++|...
T Consensus 168 ~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 168 TIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred EEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 58999999999999999888777889999999999999999999988554 6666543
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.25 E-value=1e-10 Score=63.63 Aligned_cols=57 Identities=19% Similarity=0.439 Sum_probs=50.2
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc----CCcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG----SSELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~----~~~~~~~~~~ 58 (69)
++++|+.||.|++||+.+++.+..+.+|...|.+++|+|++..++++ |..+++|..|
T Consensus 251 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 251 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 68999999999999999998888899999999999999999988876 4558888754
No 27
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.25 E-value=5.2e-11 Score=66.72 Aligned_cols=59 Identities=19% Similarity=0.346 Sum_probs=49.6
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEE----eCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASW----MSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~----~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~~ 59 (69)
+++++|+.||.|.+||..+++....+ .+|.+.|.+++|+|++..+++++. .+++|.+..
T Consensus 311 ~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 311 RLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 36899999999999999888776666 679999999999999999999854 577876543
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.23 E-value=7.7e-11 Score=64.11 Aligned_cols=58 Identities=21% Similarity=0.367 Sum_probs=49.8
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
+++++++.||.|++|+..+++....+.+|...|.+++|+|++..+++++. .+.+|..+
T Consensus 36 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 36 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC
Confidence 36899999999999999988888888999999999999999999888744 46776544
No 29
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.23 E-value=5.9e-11 Score=64.66 Aligned_cols=58 Identities=14% Similarity=0.264 Sum_probs=46.7
Q ss_pred CEEEEEeCCCcEEEEECCCCc-----eEEEEeCCCCCCeEEEEcCCCcEEEEcCCc--EEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGK-----EVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~-----~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~~ 58 (69)
++|+||+.|+.|++||+.+.. ....+.+|...|.++.|+|++..+++++.+ +.+|...
T Consensus 52 ~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~ 116 (340)
T 4aow_A 52 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT 116 (340)
T ss_dssp TEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec
Confidence 378999999999999987643 345678999999999999999999988554 6666543
No 30
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.22 E-value=2.8e-11 Score=65.88 Aligned_cols=58 Identities=16% Similarity=0.280 Sum_probs=47.0
Q ss_pred EEEEEeCCCcEEEEECCCCc----eEEEEeCCCCCCeEEEEcCCC---cEEEEc--CCcEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGK----EVASWMSFDTEPPVIKWTPGS---LMFVTG--SSELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~----~~~~~~~~~~~v~~v~~~~~~---~~~~s~--~~~~~~~~~~~ 59 (69)
+|++|+.|+.|++||+.++. ....+.+|...|.+++|+|++ ..++++ |..+++|..+.
T Consensus 172 ~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 172 KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred eEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 68999999999999997765 345678999999999999984 678877 45588886543
No 31
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.22 E-value=8.5e-11 Score=64.35 Aligned_cols=58 Identities=21% Similarity=0.229 Sum_probs=49.9
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
+++++++.||.|.+||+.+++....+.+|...|.+++|+|++..+++++. .+.+|..+
T Consensus 45 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 45 DLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp CEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred CEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 36899999999999999999888889999999999999999988888744 47776543
No 32
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.21 E-value=9.2e-11 Score=63.88 Aligned_cols=56 Identities=14% Similarity=0.276 Sum_probs=48.3
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCc--EEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~ 57 (69)
++++++.|+.|++||..+++....+.+|.+.|.+++|+|++..+++++.+ +++|..
T Consensus 187 ~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 187 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 244 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred EEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence 47899999999999999998888889999999999999999999988554 666543
No 33
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.20 E-value=2.3e-11 Score=68.56 Aligned_cols=58 Identities=10% Similarity=0.266 Sum_probs=47.5
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCC-cEEEEcC--CcEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS-LMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~--~~~~~~~~~~ 59 (69)
+|+|++.|++|++||+.++.....+..|...+.+++|+|++ .++++++ ..+++|....
T Consensus 158 ~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 158 VIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp EEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred EEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 68999999999999998887777788888999999999986 4677774 4577775543
No 34
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.20 E-value=6.6e-11 Score=70.44 Aligned_cols=57 Identities=19% Similarity=0.461 Sum_probs=49.8
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~ 57 (69)
+++++|+.||.|++||+.++.....+.+|.+.|.+++|+|++..+++++ ..+++|..
T Consensus 443 ~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 443 QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred CEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 3689999999999999999988888999999999999999998888874 45777754
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.20 E-value=6.9e-11 Score=65.34 Aligned_cols=58 Identities=17% Similarity=0.242 Sum_probs=46.8
Q ss_pred CEEEEEeCCCcEEEEECCCC-------ceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSG-------KEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~-------~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
++|++|+.|+.|++||+.++ .....+.+|...|.+++|+|++.++++++. .+++|..+
T Consensus 40 ~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~ 106 (343)
T 2xzm_R 40 PVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLR 106 (343)
T ss_dssp CEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETT
T ss_pred CEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 36899999999999998653 235567899999999999999999888854 46676543
No 36
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.19 E-value=5.8e-11 Score=65.81 Aligned_cols=58 Identities=21% Similarity=0.404 Sum_probs=47.4
Q ss_pred CEEEEEeCCCcEEEEECCCCc--eEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
++|++|+.|+.+++|+...+. ....+.+|...|.+++|+|++..+++++ ..+++|..+
T Consensus 74 ~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~ 135 (345)
T 3fm0_A 74 NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135 (345)
T ss_dssp SEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred CEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECC
Confidence 368999999999999997764 3566789999999999999999999884 457777543
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.19 E-value=5.3e-11 Score=66.63 Aligned_cols=58 Identities=19% Similarity=0.278 Sum_probs=50.1
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
+++++++.|+.|.+||+.+++.+..+.+|.+.|.+++|+|++..+++++ ..+.+|..+
T Consensus 152 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 152 EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 3689999999999999999888888899999999999999999888874 457777644
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.19 E-value=1.2e-10 Score=66.11 Aligned_cols=59 Identities=15% Similarity=0.175 Sum_probs=46.5
Q ss_pred EEEEEeCCCcEEEEECCCCce--EEEEeCCCCCCeEEEEcC-CCcEEEEcC--CcEEEEcCCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKE--VASWMSFDTEPPVIKWTP-GSLMFVTGS--SELSFWIPDLS 60 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~--~~~~~~~~~~v~~v~~~~-~~~~~~s~~--~~~~~~~~~~~ 60 (69)
+|++|+.||.|.+||+.++.. ...+.+|.+.|.+++|+| ++..+++++ ..+++|..+..
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 589999999999999987653 334568999999999998 577888874 45888865443
No 39
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.2e-10 Score=64.94 Aligned_cols=58 Identities=16% Similarity=0.268 Sum_probs=49.6
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCC-cEEEEcCCc--EEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS-LMFVTGSSE--LSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~~~~--~~~~~~~ 58 (69)
+++++++.|+.|.+||+.+++.+..+..|...+.+++|+|++ .++++++.+ +++|..+
T Consensus 276 ~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 276 HLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp SCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred CeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 368999999999999999998888899999999999999998 788888554 6666543
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.18 E-value=9.3e-11 Score=65.95 Aligned_cols=57 Identities=23% Similarity=0.396 Sum_probs=48.1
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcC------CCcEEEEcCCc--EEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP------GSLMFVTGSSE--LSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~------~~~~~~s~~~~--~~~~~~ 57 (69)
+++++|+.|+.|++||..++..+..+.+|...|.+++|++ ++..+++++.+ +++|.+
T Consensus 323 ~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 323 EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp CEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 3689999999999999999988888999999999999986 57788887544 666653
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.18 E-value=5.3e-11 Score=68.92 Aligned_cols=54 Identities=19% Similarity=0.384 Sum_probs=46.3
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEE
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFW 55 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~ 55 (69)
++|++++.||.|++||. +++.+..+.+|.+.|.+++|+|++..+++++. .+++|
T Consensus 521 ~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 521 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp SCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 36899999999999996 56777888999999999999999998888744 47776
No 42
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.18 E-value=8.1e-11 Score=64.46 Aligned_cols=57 Identities=11% Similarity=0.236 Sum_probs=49.5
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcC-CCcEEEEcC--CcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTP-GSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~--~~~~~~~~~ 58 (69)
++++|+.||.|.+||+.+++.+..+.+|...|.+++|+| ++..+++++ ..+.+|..+
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 689999999999999999988888899999999999999 888888874 457777654
No 43
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.18 E-value=7.8e-11 Score=64.12 Aligned_cols=59 Identities=10% Similarity=0.231 Sum_probs=46.9
Q ss_pred CEEEEEeCCCcEEEEECCCC--ceEEEEeCCCCCCeEEEEcCC--CcEEEEc--CCcEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSG--KEVASWMSFDTEPPVIKWTPG--SLMFVTG--SSELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~--~~~~~~~~~~~~v~~v~~~~~--~~~~~s~--~~~~~~~~~~~ 59 (69)
++|++|+.|+.|++||+..+ +.+..+.+|.+.|.+++|+|+ +..++++ |..+++|..+.
T Consensus 22 ~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 22 KRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred CEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 46899999999999999643 456778999999999999863 7788887 45577776543
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.17 E-value=6.9e-11 Score=64.86 Aligned_cols=58 Identities=17% Similarity=0.281 Sum_probs=46.1
Q ss_pred CEEEEEeCCCcEEEEECCCCc--eEEEEeCCCCCCeEEEEcC--CCcEEEEc--CCcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTP--GSLMFVTG--SSELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~v~~~~--~~~~~~s~--~~~~~~~~~~ 58 (69)
++|++|+.|+.|++||+.++. .+..+.+|.+.|.+++|+| ++..++++ |..+++|..+
T Consensus 26 ~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 26 TRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp CEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred CEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 468999999999999998764 3456789999999999985 36777777 4557777654
No 45
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.17 E-value=1.3e-10 Score=68.49 Aligned_cols=58 Identities=16% Similarity=0.381 Sum_probs=48.4
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEe-------CCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWM-------SFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~-------~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
+++++++.|+.|++||..+++....+. +|.+.|.+++|+|++..+++++. .+++|..+
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~ 269 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 269 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 368999999999999999888776663 79999999999999999998854 46676543
No 46
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.17 E-value=3.2e-11 Score=65.27 Aligned_cols=58 Identities=10% Similarity=0.351 Sum_probs=47.1
Q ss_pred EEEEEeCCCcEEEEECCCC----------------------------------------------ceEEEEeCCCCCCeE
Q 035275 2 FVISGSGDGSVYAWSVRSG----------------------------------------------KEVASWMSFDTEPPV 35 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~----------------------------------------------~~~~~~~~~~~~v~~ 35 (69)
++++++.||.|++||+..+ ..+..+.+|.+.|.+
T Consensus 232 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 311 (351)
T 3f3f_A 232 LIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWS 311 (351)
T ss_dssp EEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEE
T ss_pred EEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEE
Confidence 6899999999999999764 344556789999999
Q ss_pred EEEcCCCcEEEEcC--CcEEEEcCCC
Q 035275 36 IKWTPGSLMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 36 v~~~~~~~~~~s~~--~~~~~~~~~~ 59 (69)
++|+|++.++++++ ..+++|..+.
T Consensus 312 ~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 312 VSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp EEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEcCCCCEEEEecCCCcEEEEecCc
Confidence 99999998888874 4577776553
No 47
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.17 E-value=9.5e-11 Score=69.12 Aligned_cols=56 Identities=16% Similarity=0.243 Sum_probs=48.9
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~ 57 (69)
.+++++.|+.|++||..+++....+.+|.+.|.+++|+|++..++++ |..+++|..
T Consensus 162 ~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp EEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 48999999999999998887777889999999999999999999987 445777764
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.17 E-value=1.2e-10 Score=65.19 Aligned_cols=58 Identities=16% Similarity=0.231 Sum_probs=48.5
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
+++++++.||.|.+||+.++.....+.+|.+.|.+++|+|++..+++++. .+.+|..+
T Consensus 110 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 169 (420)
T 3vl1_A 110 RRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK 169 (420)
T ss_dssp CEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 36899999999999999888766666899999999999999988888754 46666543
No 49
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.17 E-value=1.5e-10 Score=64.99 Aligned_cols=57 Identities=16% Similarity=0.344 Sum_probs=48.6
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEE--eCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASW--MSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
.+++++.|+.|.+||+.+++....+ ..|.+.|.+++|+|++..+++++. .+++|..+
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 6899999999999999999888888 789999999999999988888754 46666543
No 50
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.16 E-value=3.2e-10 Score=63.29 Aligned_cols=57 Identities=21% Similarity=0.398 Sum_probs=47.2
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCc-EEEEcC--CcEEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGS--SELSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~--~~~~~~~~ 57 (69)
+++++|+.|+.|++||..+++.+..+.+|...|.+++|+|++. .+++++ ..+++|..
T Consensus 152 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~ 211 (357)
T 4g56_B 152 TQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDT 211 (357)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEEC
Confidence 3689999999999999999988888999999999999999764 566654 45666644
No 51
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.16 E-value=1.4e-10 Score=65.80 Aligned_cols=57 Identities=19% Similarity=0.360 Sum_probs=48.8
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~ 58 (69)
+++++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|++ .++++ |..+.+|..+
T Consensus 133 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~ 191 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK 191 (464)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETT
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC
Confidence 368999999999999999999888899999999999999988 66665 5567887654
No 52
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.16 E-value=2.8e-10 Score=62.84 Aligned_cols=59 Identities=15% Similarity=0.051 Sum_probs=46.8
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEE-eCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASW-MSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~~ 59 (69)
+++++++.||.|.+||+.+++..... ..|...+.+++|+|++.++++++. .+++|..+.
T Consensus 140 ~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 140 EYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred CEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 36899999999999999988865555 345667999999999999998744 577775443
No 53
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.16 E-value=9.4e-11 Score=64.33 Aligned_cols=57 Identities=23% Similarity=0.404 Sum_probs=46.4
Q ss_pred EEEEEeCCCcEEEEECCCCc--eEEEEeCCCCCCeEEEEcCC--CcEEEEcC--CcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPG--SLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~v~~~~~--~~~~~s~~--~~~~~~~~~ 58 (69)
+|++|+.|++|++||+.++. ....+.+|...|.+++|+|+ +.++++++ ..+++|..+
T Consensus 73 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~ 135 (316)
T 3bg1_A 73 ILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYT 135 (316)
T ss_dssp CEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEEC
T ss_pred EEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecC
Confidence 58999999999999998763 45567889999999999997 67788874 457777544
No 54
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.15 E-value=1.5e-10 Score=62.61 Aligned_cols=56 Identities=21% Similarity=0.370 Sum_probs=43.5
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEE--eCCCCCCeEEEEcCCCcEEEEcCCc--EEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASW--MSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~~ 58 (69)
.|++| .|++|++||+.+++.+..+ .+|...|.+++|+|++..+++++.+ +++|..+
T Consensus 38 ~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~ 97 (318)
T 4ggc_A 38 VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ 97 (318)
T ss_dssp EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC
Confidence 35554 5899999999999866555 4677889999999999999988554 6666544
No 55
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.15 E-value=1.4e-10 Score=63.92 Aligned_cols=57 Identities=19% Similarity=0.329 Sum_probs=41.6
Q ss_pred CEEEEEeCCCcEEEEECCC-------CceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRS-------GKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~-------~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~ 57 (69)
+++++++.|+.|++||... ......+.+|.+.|.+++|+|++..+++++ ..+++|..
T Consensus 71 ~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 71 SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp SEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 3689999999999999853 234556789999999999999999999884 45777765
No 56
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.15 E-value=1.5e-10 Score=63.34 Aligned_cols=58 Identities=21% Similarity=0.369 Sum_probs=47.3
Q ss_pred EEEEEeCCCcEEEEECCC-CceE-EEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRS-GKEV-ASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~-~~~~-~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~~ 59 (69)
++++|+.||.|++||+.+ +... ..+.+|.+.|.+++|+|++..+++++. .+.+|..+.
T Consensus 56 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 56 FLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp EEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCC
Confidence 689999999999999987 4444 567899999999999999988888754 466765443
No 57
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.15 E-value=1.4e-10 Score=69.04 Aligned_cols=57 Identities=16% Similarity=0.280 Sum_probs=49.6
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
.+++++.|+.|++||+.+++....+.+|.+.|.+++|+|++..+++++. .+++|...
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~ 591 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA 591 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred eEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 5899999999999999988878888999999999999999999998844 57777543
No 58
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.14 E-value=3.8e-10 Score=61.08 Aligned_cols=57 Identities=16% Similarity=0.224 Sum_probs=46.4
Q ss_pred CEEEEEeCCCcEEEEECCCC---------ceEEEEeCCCCCCeEEEEcCC--CcEEEEcCC--cEEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRSG---------KEVASWMSFDTEPPVIKWTPG--SLMFVTGSS--ELSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~---------~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~--~~~~~~~ 57 (69)
+++++++.||.|.+||+.++ +....+..|.+.+.+++|+|+ +..+++++. .+.+|..
T Consensus 72 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 72 RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDA 141 (351)
T ss_dssp SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEEC
T ss_pred CEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecC
Confidence 36899999999999999876 346677899999999999998 888888754 4666653
No 59
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.13 E-value=1.5e-10 Score=64.98 Aligned_cols=58 Identities=19% Similarity=0.471 Sum_probs=47.7
Q ss_pred CEEEEEeCCCcEEEEECCCC-------ceEEEEeCCCCCCeEEEEcCCC-cEEEEc--CCcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSG-------KEVASWMSFDTEPPVIKWTPGS-LMFVTG--SSELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~-------~~~~~~~~~~~~v~~v~~~~~~-~~~~s~--~~~~~~~~~~ 58 (69)
+++++|+.||.|.+||+.++ .....+.+|...|.+++|+|++ ..++++ |..+.+|..+
T Consensus 95 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 162 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG 162 (402)
T ss_dssp TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC
Confidence 36899999999999999887 4567788999999999999997 577776 4457777644
No 60
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.12 E-value=2.4e-10 Score=61.57 Aligned_cols=56 Identities=16% Similarity=0.037 Sum_probs=48.3
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEc
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWI 56 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~ 56 (69)
+++++++.||.|++||+.++.....+..|.+.+.+++|+|++..+++++ ..+.+|.
T Consensus 30 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 30 SKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp TEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred CEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 3689999999999999988887778889999999999999999888874 4577774
No 61
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.12 E-value=1.1e-09 Score=60.39 Aligned_cols=57 Identities=16% Similarity=0.455 Sum_probs=46.3
Q ss_pred CEEEEEeCCCcEEEEECCCC----ceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRSG----KEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~----~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~ 57 (69)
++|++|+.|+.|++||+... +.+..+.+|...|.+++|+|++..+++++ ..+++|..
T Consensus 120 ~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 120 YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 47899999999999999432 33556789999999999999999999884 45777753
No 62
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.12 E-value=3.4e-10 Score=63.76 Aligned_cols=50 Identities=8% Similarity=0.069 Sum_probs=44.0
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCc
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 51 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~ 51 (69)
++++|+.||.|++||..++........|..+|.+++|+|++.++++++.+
T Consensus 331 ~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~ 380 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEG 380 (393)
T ss_dssp EEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESS
T ss_pred EEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 46788999999999999988777778888999999999999999988554
No 63
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.12 E-value=3.4e-10 Score=62.00 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=48.9
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEE---eCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASW---MSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~---~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
+++++++.||.|.+||+.+++....+ ..|...|.++.|+|++..+++++ ..+.+|..+
T Consensus 129 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 129 NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred CEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECC
Confidence 36899999999999999988877777 68999999999999998888874 457777654
No 64
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.10 E-value=1.7e-10 Score=66.15 Aligned_cols=57 Identities=18% Similarity=0.330 Sum_probs=47.3
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
.+++++.||.|++||++++.......+|...+.+++|+|++..+++++ +.+.+|..+
T Consensus 164 ~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 164 MVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 689999999999999988865555667888999999999998888874 457777654
No 65
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.10 E-value=4.4e-10 Score=69.92 Aligned_cols=59 Identities=12% Similarity=0.232 Sum_probs=51.0
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~~ 59 (69)
+++++|+.||.|.+||..++..+..+.+|.+.|.+++|+|++..+++++. .+.+|..+.
T Consensus 628 ~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 628 QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 36899999999999999999888889999999999999999999888744 577776543
No 66
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.10 E-value=5.8e-10 Score=61.81 Aligned_cols=60 Identities=12% Similarity=0.323 Sum_probs=47.7
Q ss_pred CEEEEEeCCCcEEEEECCCCceEE--E-EeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcCCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVA--S-WMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPDLS 60 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~--~-~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~~~ 60 (69)
++|++|+.|+.|++||..++.... . ..+|.+.|.+++|+|++..++++ |..+.+|..+..
T Consensus 29 ~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~ 93 (345)
T 3fm0_A 29 TLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD 93 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC
T ss_pred CEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC
Confidence 368999999999999998775332 2 26899999999999999999987 456888865543
No 67
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.10 E-value=4.3e-10 Score=63.57 Aligned_cols=57 Identities=23% Similarity=0.372 Sum_probs=44.4
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEE--eCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASW--MSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~~ 59 (69)
.|++| .|++|++||..+++....+ .+|...|.+++|+|++..+++| |..+.+|..+.
T Consensus 118 ~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 118 VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC
Confidence 45555 4899999999999765544 5677889999999999999988 44577776543
No 68
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.09 E-value=2.7e-10 Score=64.26 Aligned_cols=57 Identities=9% Similarity=0.152 Sum_probs=48.8
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeC--CCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMS--FDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
++++++.|+.|.+||+.+++.+..+.. |.+.|.+++|+|++..+++++. .+.+|..+
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 244 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR 244 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 689999999999999999988888877 8899999999999998888744 47777544
No 69
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.08 E-value=2.5e-10 Score=62.45 Aligned_cols=62 Identities=13% Similarity=0.262 Sum_probs=45.3
Q ss_pred EEEEEeCCCcEEEEECCCC-------------------ceEEEEeCCCCCCeEEEEcCCCcEEE-EcCCcEEEEcCCCCC
Q 035275 2 FVISGSGDGSVYAWSVRSG-------------------KEVASWMSFDTEPPVIKWTPGSLMFV-TGSSELSFWIPDLSK 61 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~-------------------~~~~~~~~~~~~v~~v~~~~~~~~~~-s~~~~~~~~~~~~~~ 61 (69)
++++++.||.|.+||+..+ ..+..+.+|.+.|.+++|+|++..++ +++.+..+.+|++.+
T Consensus 274 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 274 LFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred EEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 6899999999999998753 23556788999999999999988776 665444444444544
Q ss_pred cC
Q 035275 62 LG 63 (69)
Q Consensus 62 ~~ 63 (69)
++
T Consensus 354 ~~ 355 (357)
T 3i2n_A 354 LN 355 (357)
T ss_dssp --
T ss_pred cc
Confidence 43
No 70
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.08 E-value=9e-10 Score=59.74 Aligned_cols=57 Identities=16% Similarity=0.301 Sum_probs=48.4
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCc--EEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~ 57 (69)
+++++++.||.|.+||+.+++....+..|.+.+.++.|+|++..+++++.+ +.+|..
T Consensus 154 ~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 154 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 368899999999999999988888888999999999999999888887544 666544
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.08 E-value=5.3e-10 Score=63.49 Aligned_cols=58 Identities=17% Similarity=0.243 Sum_probs=50.1
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
+++++++.|+.|.+||+.+++.+..+.+|...+.++.|+|++..+++++ ..+.+|..+
T Consensus 281 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 281 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 3689999999999999999988888899999999999999998888874 457777654
No 72
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.06 E-value=2.9e-10 Score=66.71 Aligned_cols=56 Identities=23% Similarity=0.159 Sum_probs=47.2
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCc--EEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~ 57 (69)
.+++++.|+.|++||++++..+..+.+|.+.|.+++|+|++..+++++.+ +++|..
T Consensus 369 ~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 369 SYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp EEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred eEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 57889999999999999887767788899999999999999988888555 555543
No 73
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.06 E-value=3.4e-10 Score=69.64 Aligned_cols=56 Identities=7% Similarity=-0.012 Sum_probs=45.3
Q ss_pred CEEEEEeCCCcEEEEECCCCc---------------------------------------------eEEEEeCCCCCCeE
Q 035275 1 MFVISGSGDGSVYAWSVRSGK---------------------------------------------EVASWMSFDTEPPV 35 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~---------------------------------------------~~~~~~~~~~~v~~ 35 (69)
++|++|+.||+|++|++.+++ .+..+.+|.+.|.+
T Consensus 501 ~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~s 580 (902)
T 2oaj_A 501 LELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSA 580 (902)
T ss_dssp TEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEE
T ss_pred CeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEE
Confidence 478999999999999997652 24556789999999
Q ss_pred EEEcCCCcEEEEcCCc--EEEEcC
Q 035275 36 IKWTPGSLMFVTGSSE--LSFWIP 57 (69)
Q Consensus 36 v~~~~~~~~~~s~~~~--~~~~~~ 57 (69)
++|+|++ ++++++.+ +++|..
T Consensus 581 vafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 581 INNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp EEECBTS-EEEEEETTSEEEEEET
T ss_pred EEecCCc-EEEEEeCCCcEEEEEC
Confidence 9999999 99988555 666654
No 74
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.06 E-value=2.8e-09 Score=57.39 Aligned_cols=60 Identities=13% Similarity=0.117 Sum_probs=50.0
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc-CCcEEEEcCCCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG-SSELSFWIPDLSK 61 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~-~~~~~~~~~~~~~ 61 (69)
.+++++.||.|.+||+.+++....+..|...+.++.|+|++.+++.+ +..+.+|..+...
T Consensus 238 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGG
T ss_pred CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCc
Confidence 47899999999999999998888889999999999999998865544 5568888766543
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.05 E-value=5e-10 Score=64.95 Aligned_cols=59 Identities=17% Similarity=0.336 Sum_probs=50.0
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeC-CCCCCeEEEEcC----------CCcEEEEcC--CcEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMS-FDTEPPVIKWTP----------GSLMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~-~~~~v~~v~~~~----------~~~~~~s~~--~~~~~~~~~~ 59 (69)
+++++++.||.|.+||+.+++.+..+.+ |...|.+++|+| ++.++++++ ..+++|..+.
T Consensus 501 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 572 (615)
T 1pgu_A 501 TYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR 572 (615)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSC
T ss_pred CEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCC
Confidence 4789999999999999999987777776 999999999999 899999884 4577776543
No 76
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.05 E-value=9.7e-10 Score=63.76 Aligned_cols=57 Identities=19% Similarity=0.315 Sum_probs=48.2
Q ss_pred CEEEEEeCCCcEEEEECCCC-ceEEEEeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSG-KEVASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~-~~~~~~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~ 58 (69)
+++++++.||.|++||+.++ ..+..+.+|.+.|.+++|+|++. ++++ |..+++|..+
T Consensus 554 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 554 DLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp CEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred CEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 36899999999999999887 66777889999999999999998 7777 4457777654
No 77
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.04 E-value=9.8e-10 Score=60.40 Aligned_cols=59 Identities=20% Similarity=0.370 Sum_probs=47.9
Q ss_pred CEEEEEeCCCcEEEEECCCCc--eEEEEeCCCCCCeEEEEcCC--CcEEEEcC--CcEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPG--SLMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~v~~~~~--~~~~~s~~--~~~~~~~~~~ 59 (69)
+++++++.||.|.+||+.++. ....+..|...+.+++|+|+ +..+++++ ..+.+|..+.
T Consensus 70 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 70 TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred CEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCC
Confidence 368999999999999998886 55667889999999999998 88888774 4577776543
No 78
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.04 E-value=1.5e-09 Score=59.38 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=47.8
Q ss_pred CEEEEEeCCCcEEEEECCC-CceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRS-GKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~-~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
+++++++.||.|.+||+.+ ......+..|...+.+++|+|++..+++++. .+.+|..+
T Consensus 188 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 188 KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 3688999999999999988 5667778899999999999999998888754 46666543
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.04 E-value=9.1e-10 Score=61.17 Aligned_cols=57 Identities=11% Similarity=0.194 Sum_probs=47.6
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEe------CC---------------CCCCeEEEEcCCC----------cEEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWM------SF---------------DTEPPVIKWTPGS----------LMFVTGS 49 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~------~~---------------~~~v~~v~~~~~~----------~~~~s~~ 49 (69)
+++++++.||.|.+||+.+++.+..+. .| ...|.+++|+|++ ..+++++
T Consensus 304 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~ 383 (397)
T 1sq9_A 304 ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVC 383 (397)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEE
T ss_pred CEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEec
Confidence 368999999999999999998888887 77 8999999999997 6777774
Q ss_pred --CcEEEEcC
Q 035275 50 --SELSFWIP 57 (69)
Q Consensus 50 --~~~~~~~~ 57 (69)
..+.+|..
T Consensus 384 ~dg~i~iw~~ 393 (397)
T 1sq9_A 384 LDRSIRWFRE 393 (397)
T ss_dssp TTTEEEEEEE
T ss_pred CCCcEEEEEc
Confidence 45666653
No 80
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.04 E-value=5.5e-10 Score=61.93 Aligned_cols=57 Identities=14% Similarity=0.269 Sum_probs=48.3
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~~ 59 (69)
++.++.++.|.+||+.++..+..+.+|.+.|.+++|+|++..+++++ ..+.+|..+.
T Consensus 307 ~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 307 FVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC
T ss_pred EEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCC
Confidence 56667889999999999998889999999999999999999888874 4577776543
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.03 E-value=7.9e-10 Score=66.17 Aligned_cols=58 Identities=19% Similarity=0.231 Sum_probs=50.0
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
+++++++.||.|.+||+.++.....+.+|.++|.++.|+|++..+++++. .+.+|.++
T Consensus 26 ~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 26 PWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred CEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 36899999999999999999888889999999999999999998888744 46676654
No 82
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.03 E-value=6.2e-10 Score=65.36 Aligned_cols=59 Identities=14% Similarity=0.080 Sum_probs=44.8
Q ss_pred EEEEEeCCCcEEEEECCCCc-eEEEEeCCCCCCeEE--EEcCCC-cEEEEcCCcEEEEcCCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGK-EVASWMSFDTEPPVI--KWTPGS-LMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~-~~~~~~~~~~~v~~v--~~~~~~-~~~~s~~~~~~~~~~~~~ 60 (69)
.|++|+.||+|.+||+.++. +...+.+|.+.|.++ .|+|++ .+++|++.+..+.+||++
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence 58999999999999998763 345678999999999 567877 788888555444444443
No 83
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.02 E-value=6.1e-11 Score=65.69 Aligned_cols=59 Identities=15% Similarity=0.216 Sum_probs=45.9
Q ss_pred CEEEEEeCCCcEEEEECCCC--ceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSG--KEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~--~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~~ 59 (69)
+++++++.|+.|.+||+.++ .....+.+|.+.|.+++|+|++..+++++. .+++|..+.
T Consensus 24 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 24 TEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp SEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred CEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 36889999999999999887 455667899999999999999988888754 566665443
No 84
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.02 E-value=4.8e-10 Score=61.69 Aligned_cols=58 Identities=16% Similarity=0.247 Sum_probs=48.6
Q ss_pred CEEEEEeCCCcEEEEECCCCc--eEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
+++++++.|+.|.+||..+++ ....+.+|...|.+++|+|++..+++++ ..+.+|..+
T Consensus 21 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 21 TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp SEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred CEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 368899999999999998886 6777889999999999999999888874 457777543
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.02 E-value=1.4e-09 Score=65.07 Aligned_cols=59 Identities=19% Similarity=0.326 Sum_probs=50.6
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~~ 59 (69)
+++++++.||.|.+||+.+++....+.+|.+.|.+++|+|++..+++++. .+.+|.++.
T Consensus 68 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128 (814)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCC
Confidence 36899999999999999999888889999999999999999988888744 577776543
No 86
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.02 E-value=1.5e-09 Score=60.59 Aligned_cols=59 Identities=14% Similarity=0.284 Sum_probs=46.9
Q ss_pred EEEEEeCCCcEEEEECCC----CceEEEEeCCCCCCeEEEEcCC-CcEEEEcCCcEEEEcCCCC
Q 035275 2 FVISGSGDGSVYAWSVRS----GKEVASWMSFDTEPPVIKWTPG-SLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~----~~~~~~~~~~~~~v~~v~~~~~-~~~~~s~~~~~~~~~~~~~ 60 (69)
++++++.||.|.+||+.+ ......+.+|.+.|.+++|+|+ +..+++++.+..+.+||..
T Consensus 81 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 81 IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 689999999999999987 3456778899999999999998 7888888655444444444
No 87
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.02 E-value=2.9e-09 Score=58.25 Aligned_cols=56 Identities=27% Similarity=0.481 Sum_probs=45.2
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEE--cCCCcEEEEcCCc--EEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKW--TPGSLMFVTGSSE--LSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~--~~~~~~~~s~~~~--~~~~~~ 57 (69)
+++++++.||.|.+||+.++.. ..+..|...|.++.| +|++..+++++.+ +++|..
T Consensus 99 ~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 158 (368)
T 3mmy_A 99 SKVFTASCDKTAKMWDLSSNQA-IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDT 158 (368)
T ss_dssp SEEEEEETTSEEEEEETTTTEE-EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECS
T ss_pred CEEEEEcCCCcEEEEEcCCCCc-eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEEC
Confidence 3689999999999999988764 446779999999999 8888888887544 666544
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.01 E-value=2.8e-10 Score=63.01 Aligned_cols=59 Identities=17% Similarity=0.371 Sum_probs=42.0
Q ss_pred CEEEEEeCCCcEEEEECCCCc---eEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGK---EVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~---~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~~ 59 (69)
+++++++.|+.|++||+.++. ....+..|...|.+++|+|++..+++++ ..+.+|..+.
T Consensus 68 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 131 (377)
T 3dwl_C 68 NRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQ 131 (377)
T ss_dssp CCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC--
T ss_pred CEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECC
Confidence 368999999999999998876 5666788999999999999988888774 4566665543
No 89
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.01 E-value=1.8e-09 Score=60.06 Aligned_cols=57 Identities=14% Similarity=0.291 Sum_probs=46.9
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCc-EEEEcCC--cEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGSS--ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~--~~~~~~~~ 58 (69)
+++++++.|+.|.+||+ ++..+..+..|.+.|.+++|+|++. ++++++. .+.+|..+
T Consensus 176 ~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 176 QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence 36899999999999999 5666788899999999999999987 7887754 46666543
No 90
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.01 E-value=2.9e-09 Score=60.36 Aligned_cols=45 Identities=11% Similarity=0.242 Sum_probs=37.8
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCC---CCCeEEEEcCCCcEEE
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFD---TEPPVIKWTPGSLMFV 46 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~---~~v~~v~~~~~~~~~~ 46 (69)
+++|++.|++|++||+.+++.+..+.+|. ..+.+++|+|++..++
T Consensus 195 ~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lv 242 (356)
T 2w18_A 195 ALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFI 242 (356)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEE
T ss_pred eEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEE
Confidence 58999999999999999999888887643 3567789999998764
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.00 E-value=8.3e-10 Score=61.34 Aligned_cols=57 Identities=11% Similarity=0.233 Sum_probs=48.3
Q ss_pred CEEEEEeCC---CcEEEEECCCCceEEEEeC-------------CCCCCeEEEEcCCCcEEEEcCCc--EEEEcC
Q 035275 1 MFVISGSGD---GSVYAWSVRSGKEVASWMS-------------FDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d---~~v~~wd~~~~~~~~~~~~-------------~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~ 57 (69)
+++++++.| +.|.+||+.+++.+..+.. |...|.++.|+|++..+++++.+ +.+|..
T Consensus 246 ~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 246 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 368899999 9999999999888888887 99999999999999998888544 666654
No 92
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.00 E-value=4e-10 Score=61.97 Aligned_cols=59 Identities=12% Similarity=0.240 Sum_probs=46.8
Q ss_pred CEEEEEeCCCcEEEEECC--CCceEEEEeCCCCCCeEEEEcCC--CcEEEEcC--CcEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVR--SGKEVASWMSFDTEPPVIKWTPG--SLMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~--~~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~--~~~~~~~~~~ 59 (69)
+++++++.||.|.+||+. +......+.+|.+.|.+++|+|+ +..+++++ ..+.+|..+.
T Consensus 24 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 24 KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred CEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence 368999999999999997 34455677899999999999876 78888874 4577775443
No 93
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.00 E-value=8.7e-10 Score=61.43 Aligned_cols=53 Identities=11% Similarity=0.050 Sum_probs=41.9
Q ss_pred EeCCCcEEEEECCCCc---------------e-EEEEeCCCCCCeEEEEcCCCcEEEEcC--Cc-EEEEcCC
Q 035275 6 GSGDGSVYAWSVRSGK---------------E-VASWMSFDTEPPVIKWTPGSLMFVTGS--SE-LSFWIPD 58 (69)
Q Consensus 6 ~~~d~~v~~wd~~~~~---------------~-~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~-~~~~~~~ 58 (69)
|+.||.|.+||+.++. + ...+.+|.+.|.+++|+|++..+++++ .. +++|...
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 6889999999998754 1 566789999999999999999999884 44 6676544
No 94
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.99 E-value=2.4e-09 Score=60.15 Aligned_cols=58 Identities=19% Similarity=0.405 Sum_probs=47.8
Q ss_pred CEEEEEeCCCcEEEEECCC-CceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRS-GKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~-~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
+.+++++.||.|.+||+.. +.....+.+|.+.|.++.|+|++..+++++ ..+.+|...
T Consensus 187 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 247 (401)
T 4aez_A 187 HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR 247 (401)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCC
Confidence 3689999999999999984 455677889999999999999999888874 457777544
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.97 E-value=2.6e-09 Score=59.42 Aligned_cols=56 Identities=18% Similarity=0.336 Sum_probs=44.6
Q ss_pred EEEEEeCCCcEEEEECCC----CceEEEEeCCCCCCeEEEEcC-CCcEEEEcC--CcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRS----GKEVASWMSFDTEPPVIKWTP-GSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~----~~~~~~~~~~~~~v~~v~~~~-~~~~~~s~~--~~~~~~~~~ 58 (69)
++++++.|+.|++||+.+ +..+..+ +|...+.+++|+| ++..+++++ ..+.+|..+
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred EEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence 689999999999999987 4434444 7999999999999 998888875 456776544
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.97 E-value=1.6e-09 Score=61.71 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=47.2
Q ss_pred EEEEEeCCCcEEEEECCCCceEEE-EeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVAS-WMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~-~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~~ 59 (69)
++++++.|+.|++||+.++..+.. +.+|.+.|.+++|+ ++..+++++. .+++|..+.
T Consensus 212 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 212 FIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp EEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTT
T ss_pred EEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCC
Confidence 689999999999999998877766 56899999999999 9988888754 466665443
No 97
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.95 E-value=8.5e-09 Score=61.58 Aligned_cols=61 Identities=16% Similarity=0.170 Sum_probs=47.7
Q ss_pred CEEEEEeCCCcEEEEECCCCce-------EEEE----eCCCCCCeEEEEcCCCcEEEEc-CCcEEEEcCCCCCc
Q 035275 1 MFVISGSGDGSVYAWSVRSGKE-------VASW----MSFDTEPPVIKWTPGSLMFVTG-SSELSFWIPDLSKL 62 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~-------~~~~----~~~~~~v~~v~~~~~~~~~~s~-~~~~~~~~~~~~~~ 62 (69)
+++++|+.||+|++||+.++.. +..+ .+|...|.+++|+|++ +++++ |..+++|..+.+..
T Consensus 142 ~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 142 SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSS
T ss_pred CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCcc
Confidence 4789999999999999988752 4555 6778899999999999 44443 66788888766553
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.95 E-value=3.3e-09 Score=59.72 Aligned_cols=58 Identities=10% Similarity=0.172 Sum_probs=45.5
Q ss_pred CEEEEEeCCCcEEEEECCCCce----EEEEeCCCC------------CCeEEEEcCCCcEEEEcCC-cEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKE----VASWMSFDT------------EPPVIKWTPGSLMFVTGSS-ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~----~~~~~~~~~------------~v~~v~~~~~~~~~~s~~~-~~~~~~~~ 58 (69)
+++++|+.||.|++||++++.. ...+..|.. .|.+++|+|++..+++++. .+.+|..+
T Consensus 240 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~ 314 (447)
T 3dw8_B 240 NTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLN 314 (447)
T ss_dssp TEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETT
T ss_pred cEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCC
Confidence 3689999999999999988775 567777775 8999999999998888744 46666543
No 99
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.94 E-value=2.5e-09 Score=60.22 Aligned_cols=58 Identities=16% Similarity=0.402 Sum_probs=45.3
Q ss_pred CEEEEEeCCCcEEEEECCCCc-----------eEEEEeCCC------------CCCeEEEEcCCC--cEEEEc--CCcEE
Q 035275 1 MFVISGSGDGSVYAWSVRSGK-----------EVASWMSFD------------TEPPVIKWTPGS--LMFVTG--SSELS 53 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~-----------~~~~~~~~~------------~~v~~v~~~~~~--~~~~s~--~~~~~ 53 (69)
++|++|+.||.|.+||+.++. ....+.+|. +.|.+++|+|++ ..++++ |..++
T Consensus 41 ~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~ 120 (447)
T 3dw8_B 41 ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIK 120 (447)
T ss_dssp SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEE
T ss_pred CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEE
Confidence 378999999999999998765 366778998 889999999987 566665 55677
Q ss_pred EEcCC
Q 035275 54 FWIPD 58 (69)
Q Consensus 54 ~~~~~ 58 (69)
+|..+
T Consensus 121 iw~~~ 125 (447)
T 3dw8_B 121 LWKIS 125 (447)
T ss_dssp EEEEE
T ss_pred EEecc
Confidence 77654
No 100
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.94 E-value=1.8e-09 Score=60.93 Aligned_cols=60 Identities=22% Similarity=0.324 Sum_probs=46.2
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEe-CCCCCCeEEEEcC----CCcEEEEcCCcEEEEcCCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWM-SFDTEPPVIKWTP----GSLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~-~~~~~v~~v~~~~----~~~~~~s~~~~~~~~~~~~~ 60 (69)
+++++|+.||.|++||++++..+..+. .|...|.++.++| ++..+++++.+..+.+||.+
T Consensus 227 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 227 CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 368999999999999999988777775 7888899996665 56688888766444444443
No 101
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.94 E-value=3.6e-09 Score=58.62 Aligned_cols=57 Identities=19% Similarity=0.327 Sum_probs=48.1
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCc-EEEEc--CCcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTG--SSELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~--~~~~~~~~~~ 58 (69)
++++++.|+.|.+||+.++.....+..|.+.|.+++|+|++. +++++ +..+.+|..+
T Consensus 158 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 158 LVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVR 217 (408)
T ss_dssp EEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECC
Confidence 689999999999999998888888899999999999999987 57666 4457777543
No 102
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.94 E-value=8.6e-09 Score=58.47 Aligned_cols=59 Identities=25% Similarity=0.320 Sum_probs=47.7
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEE-----eCCCCCCeEEEEcCCCcEEEEcCCc------EEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASW-----MSFDTEPPVIKWTPGSLMFVTGSSE------LSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~-----~~~~~~v~~v~~~~~~~~~~s~~~~------~~~~~~~~ 59 (69)
+++++|+.||.|++||+.+++.+..+ ..|.+.|.+++|+|++..+++++.+ +.+|.++.
T Consensus 373 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 373 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 36899999999999999999877766 4678889999999999998887432 55665543
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.93 E-value=1.1e-08 Score=55.85 Aligned_cols=61 Identities=10% Similarity=0.089 Sum_probs=48.0
Q ss_pred CEEEEEeCCCcEEEEECCCCc---eEEEEeCCCCCCeEEEEcCCCc-EEEEcC--CcEEEEcC-CCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGK---EVASWMSFDTEPPVIKWTPGSL-MFVTGS--SELSFWIP-DLSK 61 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~---~~~~~~~~~~~v~~v~~~~~~~-~~~s~~--~~~~~~~~-~~~~ 61 (69)
+++++++.|+.|.+|++.++. .......|...|.+++|+|++. .+++++ ..+.+|.. +...
T Consensus 24 ~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 91 (342)
T 1yfq_A 24 SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS 91 (342)
T ss_dssp TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS
T ss_pred CEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc
Confidence 368999999999999998766 3455568999999999999998 888774 45777765 4443
No 104
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.93 E-value=4.7e-09 Score=57.71 Aligned_cols=57 Identities=12% Similarity=-0.056 Sum_probs=46.3
Q ss_pred CEEEEEeCCCcEEEEECC------------------CCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcC
Q 035275 1 MFVISGSGDGSVYAWSVR------------------SGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~------------------~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~ 57 (69)
+++++++.||.|.+||+. .+.....+..|.+.+.++.|+|++..+++++. .+.+|..
T Consensus 155 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 155 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 368999999999999953 56667777899999999999999988888754 4666654
No 105
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.93 E-value=3.7e-09 Score=58.79 Aligned_cols=57 Identities=19% Similarity=0.145 Sum_probs=48.7
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
.+++++.|+.|.+||+.++..+..+..|...+.++.|+|++..+++++. .+.+|..+
T Consensus 302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 5789999999999999999888888899999999999999998888744 57776543
No 106
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.93 E-value=6.2e-09 Score=57.87 Aligned_cols=57 Identities=12% Similarity=0.304 Sum_probs=47.5
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
+++++++.||.|.+|| .++.....+..|...|.++.|+|++..+++++ ..+.+|..+
T Consensus 121 ~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 121 NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECC
Confidence 3689999999999999 56777788899999999999999998888774 457777654
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.92 E-value=5.9e-09 Score=59.22 Aligned_cols=57 Identities=21% Similarity=0.357 Sum_probs=45.6
Q ss_pred EEEEEeCCCcEEEEECCCC---ceEEEEeCCCCCCeEEEEcCCCc-EEEEcC--CcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSG---KEVASWMSFDTEPPVIKWTPGSL-MFVTGS--SELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~---~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~--~~~~~~~~~ 58 (69)
.+++++.||.|.+||++++ .....+..|...+.+++|+|++. ++++++ +.+.+|..+
T Consensus 246 ~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~ 308 (430)
T 2xyi_A 246 LFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 308 (430)
T ss_dssp EEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred EEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCC
Confidence 5889999999999999876 45566778999999999999875 677764 456676544
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.92 E-value=3.5e-09 Score=57.73 Aligned_cols=58 Identities=17% Similarity=0.129 Sum_probs=46.1
Q ss_pred CEEEEEeCCCcEEEEECCCC------ceEEEEeCCCC---------CCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSG------KEVASWMSFDT---------EPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~------~~~~~~~~~~~---------~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
+++++++.||.|.+|+.+.. .....+..|.. .|.+++|+|++..+++++. .+.+|..+
T Consensus 207 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 207 EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred CEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 36899999999999999876 55667777754 8999999999988888744 57777654
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.91 E-value=5e-09 Score=59.40 Aligned_cols=57 Identities=14% Similarity=0.282 Sum_probs=46.6
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~~ 59 (69)
+++++|+.||.|.+||..+++....+.+|.+.|.+++| ++..++++ |+.+.+|..+.
T Consensus 144 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 144 QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp SEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred CEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC
Confidence 36899999999999999999888888999999999988 45567766 45677776543
No 110
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.91 E-value=6e-09 Score=64.95 Aligned_cols=56 Identities=14% Similarity=0.318 Sum_probs=48.9
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~ 57 (69)
.+++|+.|+.|.+||+.++.....+.+|.+.|.++.|+|++..+++++. .+.+|..
T Consensus 715 ~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~ 772 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDV 772 (1249)
T ss_dssp EEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEG
T ss_pred EEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeC
Confidence 5789999999999999999888888999999999999999998888754 4666653
No 111
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.91 E-value=7.9e-09 Score=56.01 Aligned_cols=58 Identities=14% Similarity=0.222 Sum_probs=46.3
Q ss_pred CEEEEEeCCCcEEEEECCCCc--eEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
+++++++.|+.|.+||+.++. ....+..|...+.++.|+|++..+++++ ..+.+|..+
T Consensus 110 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 368899999999999998876 4556788999999999999998888774 457777544
No 112
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.90 E-value=1.5e-08 Score=56.92 Aligned_cols=58 Identities=22% Similarity=0.487 Sum_probs=46.6
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCC-cEEEEc----CCcEEEEcCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGS-LMFVTG----SSELSFWIPD 58 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~s~----~~~~~~~~~~ 58 (69)
+++++++.|+.|++||+.++.....+..|...+.+++|+|++ .+++++ +..+.+|..+
T Consensus 230 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 230 LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT
T ss_pred CEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC
Confidence 368999999999999999988888888999999999999965 566664 3346666543
No 113
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.90 E-value=2e-09 Score=58.87 Aligned_cols=58 Identities=22% Similarity=0.365 Sum_probs=46.1
Q ss_pred EEEEEeCCCcEEEEECCCCc-eEEEEeCCCCCCeEEEE------cCCCcEEEEcCC--cEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGK-EVASWMSFDTEPPVIKW------TPGSLMFVTGSS--ELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~-~~~~~~~~~~~v~~v~~------~~~~~~~~s~~~--~~~~~~~~~ 59 (69)
++++++.||.|.+||+.++. ....+.+|...|.++.| +|++..+++++. .+.+|..+.
T Consensus 82 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~ 148 (357)
T 3i2n_A 82 YLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQ 148 (357)
T ss_dssp CEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTS
T ss_pred eEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCC
Confidence 58999999999999998887 67788899999999965 577888888744 577765443
No 114
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.89 E-value=7e-09 Score=62.68 Aligned_cols=59 Identities=22% Similarity=0.380 Sum_probs=48.1
Q ss_pred CEEEEEeCCCcEEEEECCCCc--eEEEEeCCCCCCeEEEEcCC--CcEEEEcCC--cEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPG--SLMFVTGSS--ELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~v~~~~~--~~~~~s~~~--~~~~~~~~~ 59 (69)
+++++|+.||.|++||+.++. ....+.+|...|.+++|+|+ +..+++++. .+.+|..+.
T Consensus 68 ~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 68 TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCS
T ss_pred CEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeec
Confidence 368999999999999998876 45667889999999999998 888888744 577776543
No 115
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.89 E-value=5.2e-09 Score=64.53 Aligned_cols=57 Identities=14% Similarity=0.154 Sum_probs=47.1
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~~ 59 (69)
+|++++.|+.|++||+.+++.+..+. |.+.|.++.|+|++..+++++ ..+++|..+.
T Consensus 71 ~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~ 129 (902)
T 2oaj_A 71 YLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDR 129 (902)
T ss_dssp EEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTT
T ss_pred EEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 68999999999999999888776665 668899999999999988874 4577776543
No 116
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.89 E-value=3.6e-08 Score=56.01 Aligned_cols=65 Identities=14% Similarity=0.007 Sum_probs=46.1
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEe--CCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCCCCCcCcc
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWM--SFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPDLSKLGAY 65 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~~~~~~~~ 65 (69)
++|++++.||.|++||+.++....... .+...+.+++|+|++.++++++. .+.+|..+...+..+
T Consensus 178 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~ 246 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNL 246 (435)
T ss_dssp TEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCS
T ss_pred CEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEE
Confidence 368999999999999997664332232 33445678999999999998854 577776554444433
No 117
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.87 E-value=2.1e-08 Score=56.15 Aligned_cols=51 Identities=8% Similarity=-0.087 Sum_probs=40.6
Q ss_pred EEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC-cEEEE
Q 035275 4 ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS-ELSFW 55 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~-~~~~~ 55 (69)
++++.|+.|++||+.++.....+. |.+.|.+++|+|++..+++++. .+.+|
T Consensus 151 as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~ 202 (365)
T 4h5i_A 151 ASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVI 202 (365)
T ss_dssp EESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEE
T ss_pred EECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEE
Confidence 466688999999999988766664 7788999999999999988743 45544
No 118
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.87 E-value=2.5e-08 Score=56.55 Aligned_cols=55 Identities=20% Similarity=0.421 Sum_probs=36.9
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~ 58 (69)
++++|+.||.|++||+.+++....+.+|.+.|.++.|+++ .++++ |..+.+|..+
T Consensus 131 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~--~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 131 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 187 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETT
T ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCC--EEEEEeCCCeEEEEECC
Confidence 5677777777777777777766677777777777777643 44444 4456666543
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.85 E-value=9.3e-09 Score=58.58 Aligned_cols=58 Identities=14% Similarity=0.204 Sum_probs=46.0
Q ss_pred EEEEeCCCcEEEEECC--CCceEEEEe--CCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCC
Q 035275 3 VISGSGDGSVYAWSVR--SGKEVASWM--SFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~--~~~~~~~~~--~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~ 60 (69)
+++++.||.|.+||+. ++..+..+. .|...+.+++|+|++..+++++.+..++.|++.
T Consensus 118 ~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 118 IACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp EEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecC
Confidence 4889999999999998 777666664 677889999999999999988666555555443
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.84 E-value=3e-09 Score=64.25 Aligned_cols=59 Identities=12% Similarity=0.234 Sum_probs=47.0
Q ss_pred CEEEEEeCCCcEEEEECCC--CceEEEEeCCCCCCeEEEEcCC--CcEEEEcC--CcEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRS--GKEVASWMSFDTEPPVIKWTPG--SLMFVTGS--SELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~--~~~~~~~~~~~~~v~~v~~~~~--~~~~~s~~--~~~~~~~~~~ 59 (69)
+++++|+.||.|.+||+.. +.....+.+|.+.|.+++|+|+ +..+++++ +.+.+|..+.
T Consensus 22 ~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 22 KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 86 (753)
T ss_dssp CCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET
T ss_pred CeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC
Confidence 3689999999999999974 3456677899999999999987 88888874 4577776443
No 121
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.83 E-value=4.3e-08 Score=55.58 Aligned_cols=57 Identities=23% Similarity=0.472 Sum_probs=46.9
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcCCC
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPDL 59 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~~ 59 (69)
+++++|+.||.|.+||+.+++....+.+|...|.++.|+++ .++++ +..+.+|..+.
T Consensus 184 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~i~vwd~~~ 242 (435)
T 1p22_A 184 RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMAS 242 (435)
T ss_dssp SEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTT--EEEEEETTSCEEEEECSS
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC--EEEEeeCCCcEEEEeCCC
Confidence 36899999999999999999888888999999999999865 55555 55688876543
No 122
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.81 E-value=5.7e-09 Score=59.28 Aligned_cols=58 Identities=10% Similarity=0.240 Sum_probs=47.2
Q ss_pred EEEEEeCCCcEEEEECCC----------CceEEEEeCCCCCCeEEEEcCCCc-EEEEcC--CcEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRS----------GKEVASWMSFDTEPPVIKWTPGSL-MFVTGS--SELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~----------~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~--~~~~~~~~~~ 59 (69)
++++++.||.|.+|++.+ ......+.+|...+.+++|+|++. .+++++ +.+.+|..+.
T Consensus 143 ~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 213 (430)
T 2xyi_A 143 VIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINA 213 (430)
T ss_dssp EEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTS
T ss_pred EEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCC
Confidence 688999999999999976 455677889999999999999877 888774 4577776544
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.70 E-value=1.3e-07 Score=56.67 Aligned_cols=57 Identities=18% Similarity=0.266 Sum_probs=44.1
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCC-----CCeEEEEcCCCcEEEEc--CCcEEEEcCCCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDT-----EPPVIKWTPGSLMFVTG--SSELSFWIPDLSK 61 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~~~s~--~~~~~~~~~~~~~ 61 (69)
.+++++.||.|.+||... .+..+. |.. .+.+++|+|++.+++++ |+.+.+|......
T Consensus 99 ~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 99 WMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp CEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred EEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 589999999999999543 444555 654 48999999999999988 4557888765544
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.59 E-value=2.3e-07 Score=51.53 Aligned_cols=56 Identities=20% Similarity=0.125 Sum_probs=43.2
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEE-EEc--CCcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMF-VTG--SSELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~--~~~~~~~~~~ 58 (69)
.+++++.|+.|.+||+.+++....+..|.. +.+++|+|++..+ +++ +..+.+|...
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~ 62 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTA 62 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETT
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECC
Confidence 478889999999999999887777776654 7899999998754 565 4456666543
No 125
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.55 E-value=8.2e-09 Score=59.24 Aligned_cols=53 Identities=13% Similarity=0.106 Sum_probs=39.9
Q ss_pred EEeCCCcEEEEECCCC--------ce---EEEEeCCCCCCeEEEEcCC-CcEEEEc--CCcEEEEcC
Q 035275 5 SGSGDGSVYAWSVRSG--------KE---VASWMSFDTEPPVIKWTPG-SLMFVTG--SSELSFWIP 57 (69)
Q Consensus 5 s~~~d~~v~~wd~~~~--------~~---~~~~~~~~~~v~~v~~~~~-~~~~~s~--~~~~~~~~~ 57 (69)
+++.|+.|++||+.++ +. ...+.+|...|.+++|+|+ +.+++++ |..+++|..
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~ 179 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQV 179 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEE
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEc
Confidence 7888999999998654 21 3345678999999999997 6778876 445777654
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.54 E-value=3.1e-07 Score=51.62 Aligned_cols=56 Identities=11% Similarity=0.060 Sum_probs=45.0
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEE-EEc--CCcEEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMF-VTG--SSELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~--~~~~~~~~~ 57 (69)
.+++++.|+.|.+||..+++....+..|...+.+++|+|++..+ +++ +..+.+|..
T Consensus 183 ~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~ 241 (433)
T 3bws_A 183 LWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDR 241 (433)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEEC
Confidence 57888999999999999888788888888889999999998765 455 344666654
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.45 E-value=1.5e-07 Score=52.92 Aligned_cols=57 Identities=12% Similarity=0.073 Sum_probs=43.9
Q ss_pred EEEEEeCCCcEEEEECCCCceEEE-----EeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVAS-----WMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~-----~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
.+++++.++.|.+||..+++.... +.+|.+.+.+++|+|++.++++++. .+.+|..+
T Consensus 136 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 136 LAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp EEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT
T ss_pred EEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC
Confidence 467777788999999998876652 3478888999999999998888754 46666543
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.36 E-value=4.6e-06 Score=47.50 Aligned_cols=58 Identities=12% Similarity=0.170 Sum_probs=43.1
Q ss_pred EEEEEeCCC---cEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEE-Ec--CCcEEEEcCCCC
Q 035275 2 FVISGSGDG---SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFV-TG--SSELSFWIPDLS 60 (69)
Q Consensus 2 ~~~s~~~d~---~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-s~--~~~~~~~~~~~~ 60 (69)
.+++++.++ .|.+||+.+++. ..+..|.+.+.+++|+|++..++ ++ +.+..+|.||..
T Consensus 192 ~la~~s~~~~~~~i~~~d~~tg~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 192 KLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred EEEEEEecCCCcEEEEEECCCCcE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 577787775 899999988874 45777888899999999998666 54 334456655543
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.31 E-value=3.3e-06 Score=46.93 Aligned_cols=55 Identities=16% Similarity=0.132 Sum_probs=40.8
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEE-EEcC--CcEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMF-VTGS--SELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~--~~~~~~~~~ 58 (69)
+++++.|+.|.+||..+++....+..+. .+.+++|+|++..+ +++. ..+.+|..+
T Consensus 47 ~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 47 YVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECC
Confidence 4677789999999999888766666554 78999999998865 4443 346666543
No 130
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.27 E-value=1.3e-06 Score=50.04 Aligned_cols=55 Identities=7% Similarity=0.032 Sum_probs=43.2
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSK 61 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~~ 61 (69)
++++..||.|.+||+.++.... +...|.|++|+|++..++.+++.+.+|.++...
T Consensus 139 ~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 139 LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGE 193 (388)
T ss_dssp EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEETTSCEEEEEEETTE
T ss_pred EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEcCCcEEEEcCCCcc
Confidence 5677899999999998776432 334689999999997676778889999776544
No 131
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.24 E-value=4.6e-06 Score=52.04 Aligned_cols=48 Identities=13% Similarity=0.096 Sum_probs=40.5
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~ 48 (69)
+++++++.++.|.+||+.+++.......|.+.+..++|+|++..++.+
T Consensus 391 ~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 391 KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred CEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEE
Confidence 367888999999999999887665566888889999999999877765
No 132
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.20 E-value=1.3e-05 Score=43.61 Aligned_cols=56 Identities=13% Similarity=0.034 Sum_probs=45.5
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCC-CCCeEEEEcCCCcEEEEcCCcEEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFD-TEPPVIKWTPGSLMFVTGSSELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~s~~~~~~~~~~ 57 (69)
.+++++.++.|.+||..+++.+..+..+. ..+..+.+.|++.++++.+..+..+.+
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~ 63 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR 63 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC
Confidence 57889999999999998999888887765 467889999999998876655555444
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.20 E-value=9.7e-06 Score=43.89 Aligned_cols=56 Identities=13% Similarity=0.073 Sum_probs=39.8
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCC-C-CCeEEEEcCCCcE-EEEcCC--cEEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFD-T-EPPVIKWTPGSLM-FVTGSS--ELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~-~-~v~~v~~~~~~~~-~~s~~~--~~~~~~~ 57 (69)
++++++.++.|.+||..+++....+.... . .+..++|+|++.. ++++.. .+.+|..
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 63 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEEC
Confidence 68899999999999999887766664332 1 4678999999854 455543 4555543
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.20 E-value=1.2e-05 Score=42.51 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=40.2
Q ss_pred EeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc-CCcEEEEcCCC
Q 035275 6 GSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG-SSELSFWIPDL 59 (69)
Q Consensus 6 ~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~-~~~~~~~~~~~ 59 (69)
++.|+.|.+||+.+++. ..+..|.+.+.+++|+|++..++++ +..+.+|..+.
T Consensus 18 ~~~~~~i~~~d~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~ 71 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKM-RVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAG 71 (297)
T ss_dssp CCCCEEEEEEETTTTEE-EEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSS
T ss_pred CCcceeEEEEeCCCCce-eeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCC
Confidence 45678999999988764 4566688889999999999887776 44566665444
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.19 E-value=5.9e-06 Score=48.79 Aligned_cols=55 Identities=9% Similarity=-0.017 Sum_probs=42.2
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~ 57 (69)
.+++++.|+.|.+||..+++.+..+..+.. +..++|+|++..+.+++. .+.+|..
T Consensus 151 ~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~ 207 (543)
T 1nir_A 151 FSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDL 207 (543)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred EEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEEC
Confidence 578888899999999999988777763323 779999999988777644 4555544
No 136
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.12 E-value=6.3e-06 Score=48.33 Aligned_cols=58 Identities=12% Similarity=0.018 Sum_probs=43.2
Q ss_pred EEEEEeCC----CcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCc--EEEEcCCCC
Q 035275 2 FVISGSGD----GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDLS 60 (69)
Q Consensus 2 ~~~s~~~d----~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~~~~ 60 (69)
++++++.+ +.|.+||+.+++ ...+..|.+.+..++|+|++..+++++.+ ..+|.||..
T Consensus 163 ~la~~~~~~~~~~~i~~~d~~~g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 163 LIAGLGFFGGGRVSLFTSNLSSGG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTT
T ss_pred EEEEEEEcCCCCeEEEEEcCCCCC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCC
Confidence 56666665 679999998776 44677888888999999999988866433 466666654
No 137
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.09 E-value=5.9e-06 Score=47.04 Aligned_cols=39 Identities=5% Similarity=-0.113 Sum_probs=32.0
Q ss_pred CcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC
Q 035275 10 GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS 49 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~ 49 (69)
+.|.+||.+.+ ....+..|...+.+++|+|++..+++++
T Consensus 159 ~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s 197 (415)
T 2hqs_A 159 YELRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVT 197 (415)
T ss_dssp EEEEEEETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEE
Confidence 68999999754 3566777888999999999998887763
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.07 E-value=2.7e-05 Score=42.32 Aligned_cols=57 Identities=7% Similarity=-0.192 Sum_probs=39.8
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEE-EEcCCcEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMF-VTGSSELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~-~s~~~~~~~~~~~~ 59 (69)
.+++.+.++.|.+||..+++....+..+.... .++|+|++..+ +++..+..++.||.
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~ 69 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIET 69 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEEC
T ss_pred EEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEEC
Confidence 36778888999999999988766666555555 99999998744 44433334444443
No 139
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.00 E-value=5.4e-05 Score=41.19 Aligned_cols=56 Identities=14% Similarity=0.078 Sum_probs=39.9
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCC-CCCeEEEEcCCCcE-EEEcCC--cEEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFD-TEPPVIKWTPGSLM-FVTGSS--ELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~~v~~~~~~~~-~~s~~~--~~~~~~~ 57 (69)
++++++.++.|.+||..+++....+..+. ..+..++|+|++.. +++... .+.+|..
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeC
Confidence 57888899999999999888766665443 24678999999864 455433 4555543
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.97 E-value=1.9e-05 Score=41.77 Aligned_cols=58 Identities=10% Similarity=0.197 Sum_probs=41.9
Q ss_pred EEEEEeCCCcEEEEECCC-CceEEEEeCC-CCCCeEEEEcCCCcEEEEcC----CcEEEEcCCCC
Q 035275 2 FVISGSGDGSVYAWSVRS-GKEVASWMSF-DTEPPVIKWTPGSLMFVTGS----SELSFWIPDLS 60 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~-~~~~~~~~~~-~~~v~~v~~~~~~~~~~s~~----~~~~~~~~~~~ 60 (69)
++++++ ++.|.+||+.+ ++.......+ ...+.+++|+|++..++.+. ....+|.++..
T Consensus 55 ~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~ 118 (297)
T 2ojh_A 55 YLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST 118 (297)
T ss_dssp EEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT
T ss_pred EEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC
Confidence 466665 68999999988 7655444455 36678899999998877764 35778876543
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.90 E-value=8.8e-06 Score=48.54 Aligned_cols=42 Identities=12% Similarity=0.153 Sum_probs=34.3
Q ss_pred eCCCcEEEEECCCCceEEEEeCCCC---CCeEEEEcCCCcEEEEc
Q 035275 7 SGDGSVYAWSVRSGKEVASWMSFDT---EPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 7 ~~d~~v~~wd~~~~~~~~~~~~~~~---~v~~v~~~~~~~~~~s~ 48 (69)
+.||.|.+||..+++....+..|.. .+..++|+|++..++++
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 78 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFS 78 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEE
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEE
Confidence 6789999999998876666666654 48899999999988876
No 142
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.90 E-value=5e-05 Score=44.91 Aligned_cols=56 Identities=9% Similarity=0.087 Sum_probs=42.1
Q ss_pred CEEEEEeCCCcEEEEEC--CCCceEEEEeCCCCCCeEEEEcC----CCcEEEEc---CCcEEEEcC
Q 035275 1 MFVISGSGDGSVYAWSV--RSGKEVASWMSFDTEPPVIKWTP----GSLMFVTG---SSELSFWIP 57 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~--~~~~~~~~~~~~~~~v~~v~~~~----~~~~~~s~---~~~~~~~~~ 57 (69)
+++++++.|+.|.+||+ .+++.+..+... .....++|+| ++..++++ +..+.+|..
T Consensus 191 ~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~ 255 (543)
T 1nir_A 191 RYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG 255 (543)
T ss_dssp CEEEEEETTSEEEEEETTSSSCEEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred CEEEEECCCCeEEEEECcCCCCcEEEEEecC-CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEec
Confidence 47888999999999999 777766666643 3458999999 98877765 345777643
No 143
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.89 E-value=2.2e-05 Score=47.02 Aligned_cols=57 Identities=16% Similarity=0.287 Sum_probs=39.5
Q ss_pred EEEeCCCcEEEEECCCCceEEEEeCCCC---CCeEEEEcCCCcEEEEcCC---------cEEEEcCCCC
Q 035275 4 ISGSGDGSVYAWSVRSGKEVASWMSFDT---EPPVIKWTPGSLMFVTGSS---------ELSFWIPDLS 60 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~~~~~~~~~~~~---~v~~v~~~~~~~~~~s~~~---------~~~~~~~~~~ 60 (69)
+..+.|+.|.+||+.+++....+..+.. .+..++|+|++..++.++. +..+|+||..
T Consensus 30 ~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 30 LHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp EEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred EEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 3345689999999988875544444432 4789999999998876633 4556665543
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.89 E-value=0.00015 Score=43.44 Aligned_cols=60 Identities=17% Similarity=0.177 Sum_probs=41.3
Q ss_pred CEEEEEeC-CC-----cEEEEECCCCceEEEEeCCCC------------------------CCeEEEEcCCCcEEEEc-C
Q 035275 1 MFVISGSG-DG-----SVYAWSVRSGKEVASWMSFDT------------------------EPPVIKWTPGSLMFVTG-S 49 (69)
Q Consensus 1 ~~~~s~~~-d~-----~v~~wd~~~~~~~~~~~~~~~------------------------~v~~v~~~~~~~~~~s~-~ 49 (69)
+++++++. |+ .|.+||+.+++....+..+.. .+..++|+|++..++.+ .
T Consensus 49 ~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~ 128 (741)
T 2ecf_A 49 SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG 128 (741)
T ss_dssp SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET
T ss_pred CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC
Confidence 35777777 77 899999988875444433322 27789999999887766 4
Q ss_pred CcEEEEcCCCC
Q 035275 50 SELSFWIPDLS 60 (69)
Q Consensus 50 ~~~~~~~~~~~ 60 (69)
..+.+|..+..
T Consensus 129 ~~i~~~d~~~~ 139 (741)
T 2ecf_A 129 GELYLYDLKQE 139 (741)
T ss_dssp TEEEEEESSSC
T ss_pred CcEEEEECCCC
Confidence 45666654433
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.83 E-value=5e-05 Score=45.52 Aligned_cols=56 Identities=13% Similarity=0.056 Sum_probs=41.0
Q ss_pred EEEEEeCCCcEEEEECCCCc--eEEEEeCCCCCCeEEEEcCCCcEEEEc-CCcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGK--EVASWMSFDTEPPVIKWTPGSLMFVTG-SSELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~v~~~~~~~~~~s~-~~~~~~~~~~ 58 (69)
++++++. +.|.+||+.++. ....+..|...+..++|+|++..++.+ +.++.+|..+
T Consensus 122 ~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~ 180 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLA 180 (741)
T ss_dssp EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETT
T ss_pred EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecC
Confidence 5666665 889999998772 345567777888999999999987766 4455555443
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.76 E-value=0.00011 Score=39.92 Aligned_cols=53 Identities=9% Similarity=0.086 Sum_probs=35.5
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~ 58 (69)
++++ ++.|.+||+.+++....+... ..+.+++|+|++..++++ +..+.+|..+
T Consensus 270 l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 270 IYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp EEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred EEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEecc
Confidence 4444 678999999988766665433 345789999997655544 3346666543
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.76 E-value=0.00021 Score=38.80 Aligned_cols=45 Identities=11% Similarity=0.011 Sum_probs=33.5
Q ss_pred EEEeCCCcEEEEECCCCce-EEEEeCCCCCCeEEEEcCCCcEEEEc
Q 035275 4 ISGSGDGSVYAWSVRSGKE-VASWMSFDTEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~~s~ 48 (69)
+++..++.|.+||..+++. ...+..+..+..++.|+|++..++++
T Consensus 56 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 101 (331)
T 3u4y_A 56 VTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTV 101 (331)
T ss_dssp EEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEEC
T ss_pred EEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEe
Confidence 3444478999999988876 55666666665559999999877755
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.70 E-value=0.00046 Score=37.62 Aligned_cols=56 Identities=11% Similarity=-0.045 Sum_probs=39.0
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeC----CCCCCeEEEEcCCCcEEEE-cCC--cEEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMS----FDTEPPVIKWTPGSLMFVT-GSS--ELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~----~~~~v~~v~~~~~~~~~~s-~~~--~~~~~~~ 57 (69)
++++++.++.|.+||..+++....+.. +...+..+.|+|++..+.. ... .+.+|..
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 567778889999999998887666543 4455678999999875444 333 3555543
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.69 E-value=0.00058 Score=36.88 Aligned_cols=50 Identities=8% Similarity=0.149 Sum_probs=37.1
Q ss_pred CCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCC
Q 035275 8 GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPD 58 (69)
Q Consensus 8 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~ 58 (69)
.++.|.+||..+++....+.. ...+..+.|+|++..++.++.++.+|..+
T Consensus 113 ~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~i~~~d~~ 162 (337)
T 1pby_B 113 QPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLGRDLHVMDPE 162 (337)
T ss_dssp CCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEESSSEEEEETT
T ss_pred cCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeCCeEEEEECC
Confidence 468999999988876655544 34467888999998666667778777654
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.68 E-value=0.00025 Score=38.66 Aligned_cols=52 Identities=6% Similarity=-0.054 Sum_probs=36.4
Q ss_pred CCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCC
Q 035275 8 GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 59 (69)
Q Consensus 8 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~ 59 (69)
.++.|.+||..+++....+..+...+..+.|+|++..++.++.+-.++.+|.
T Consensus 162 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~ 213 (353)
T 3vgz_A 162 KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDT 213 (353)
T ss_dssp SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEET
T ss_pred CCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEEC
Confidence 4778999999988877666655555778999999887666544433333443
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.65 E-value=0.00043 Score=43.46 Aligned_cols=57 Identities=9% Similarity=0.059 Sum_probs=42.2
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC------CcEEEEcCCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS------SELSFWIPDLS 60 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~------~~~~~~~~~~~ 60 (69)
.++.++. +.|.+|++..+. ...+..|.+.+.+++|+|++..++.++ .+..+|+|+..
T Consensus 26 ~iaf~~~-~~l~~~~~~gg~-~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~ 88 (1045)
T 1k32_A 26 RIIFVCC-DDLWEHDLKSGS-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGE 88 (1045)
T ss_dssp EEEEEET-TEEEEEETTTCC-EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETT
T ss_pred EEEEEEC-CcEEEEECCCCc-EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECC
Confidence 3555554 689999997765 567788999999999999999888652 34566666543
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.65 E-value=0.0007 Score=37.13 Aligned_cols=57 Identities=14% Similarity=0.240 Sum_probs=38.8
Q ss_pred EEEeCCCcEEEEECCCC---ceEEEEeCCCCCCeEEEEcCCCcEEEEc---CCcEEEEcCCCC
Q 035275 4 ISGSGDGSVYAWSVRSG---KEVASWMSFDTEPPVIKWTPGSLMFVTG---SSELSFWIPDLS 60 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~---~~~~~~~~~~~~v~~v~~~~~~~~~~s~---~~~~~~~~~~~~ 60 (69)
++...++.|.+|++... ..+..+..+...+..++|+|++..++++ +..+.+|..|..
T Consensus 256 v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 256 VSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLT 318 (347)
T ss_dssp EEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCC
Confidence 56666889999998632 2334455556667899999999866554 245778755543
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.63 E-value=0.00012 Score=39.62 Aligned_cols=56 Identities=9% Similarity=0.178 Sum_probs=38.1
Q ss_pred EEEEeCCCcEEEEECCC-Cce-EEEEeCCCCCCeEEEEcCCCcEEEEc-C--CcEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRS-GKE-VASWMSFDTEPPVIKWTPGSLMFVTG-S--SELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~-~~~-~~~~~~~~~~v~~v~~~~~~~~~~s~-~--~~~~~~~~~ 58 (69)
+++++.|+.|.+|+++. +.. ......+...+.+++|+|++..++++ . ..+.+|..+
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~ 68 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 68 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEec
Confidence 44557789999999953 321 22234566778899999999865554 2 457777665
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.56 E-value=0.0016 Score=35.96 Aligned_cols=58 Identities=14% Similarity=0.292 Sum_probs=37.6
Q ss_pred EEEEEeC--CCcEEEEECC--CCc--eEEEEeCCCCCCeEEEEcCCCcEEEEc---CCcEEEEcCCCC
Q 035275 2 FVISGSG--DGSVYAWSVR--SGK--EVASWMSFDTEPPVIKWTPGSLMFVTG---SSELSFWIPDLS 60 (69)
Q Consensus 2 ~~~s~~~--d~~v~~wd~~--~~~--~~~~~~~~~~~v~~v~~~~~~~~~~s~---~~~~~~~~~~~~ 60 (69)
+++++.. ++.|.+|+++ ++. .+..+.. ...+..++|+|++..++.+ +..+.+|.+|..
T Consensus 272 ~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 272 YLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQA 338 (361)
T ss_dssp EEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTT
T ss_pred EEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECC
Confidence 4544444 4789999986 344 2333333 4556799999999866654 345888877753
No 155
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.55 E-value=0.0005 Score=37.21 Aligned_cols=55 Identities=7% Similarity=-0.007 Sum_probs=36.4
Q ss_pred EEEeCCCcEEEEECC--CCc--eEEEEeCCCCCCeEEEEcCCCcEEEEcC---CcEEEEcCCC
Q 035275 4 ISGSGDGSVYAWSVR--SGK--EVASWMSFDTEPPVIKWTPGSLMFVTGS---SELSFWIPDL 59 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~--~~~--~~~~~~~~~~~v~~v~~~~~~~~~~s~~---~~~~~~~~~~ 59 (69)
+++..++.|.+||+. ++. .+..+..+.. +..++|+|++..++.++ ..+.+|..+.
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred EEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 355578899999997 332 2333444444 78899999988655543 4588885553
No 156
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.53 E-value=0.0013 Score=35.90 Aligned_cols=47 Identities=15% Similarity=0.244 Sum_probs=34.6
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS 49 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~ 49 (69)
++++..++.|.+||..+++.......+...+.++.++|++.++++..
T Consensus 59 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~ 105 (333)
T 2dg1_A 59 FLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYL 105 (333)
T ss_dssp EEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEEC
T ss_pred EEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeC
Confidence 45667788899999887764333335566788999999998877754
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.52 E-value=0.00027 Score=42.85 Aligned_cols=48 Identities=8% Similarity=0.157 Sum_probs=36.3
Q ss_pred CcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc-CCcEEEEcCC
Q 035275 10 GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG-SSELSFWIPD 58 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~-~~~~~~~~~~ 58 (69)
+.+.+||+.+++ ...+..+.+.+..++|||++..++.+ +.++.+|..+
T Consensus 92 ~~~~~~d~~~~~-~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~ 140 (740)
T 4a5s_A 92 ASYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEP 140 (740)
T ss_dssp EEEEEEETTTTE-ECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESST
T ss_pred eEEEEEECCCCc-EEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECC
Confidence 567799998876 44566777888999999999887765 5566666543
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.51 E-value=0.00023 Score=39.49 Aligned_cols=56 Identities=11% Similarity=-0.037 Sum_probs=35.8
Q ss_pred EEEEEeC-CC--cEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcC
Q 035275 2 FVISGSG-DG--SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~-d~--~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~ 57 (69)
+++.++. ++ .|.+||+.+++.......+...+..+.|+|++..++.+.. .+.+|..
T Consensus 49 ~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~ 109 (388)
T 3pe7_A 49 KLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDL 109 (388)
T ss_dssp EEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEET
T ss_pred EEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEEC
Confidence 4566665 56 3888898877644334455555556789999987776643 3544443
No 159
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.46 E-value=0.0012 Score=35.63 Aligned_cols=54 Identities=11% Similarity=0.075 Sum_probs=40.5
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~ 57 (69)
.++++..++.|..|+..++ ...+..+...+.++.++|++.++++... .+..|.+
T Consensus 42 l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 4677778889999999776 5566667777889999999988887644 3555544
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.43 E-value=0.001 Score=39.81 Aligned_cols=50 Identities=12% Similarity=0.141 Sum_probs=37.2
Q ss_pred CCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc-CCcEEEEcCC
Q 035275 8 GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG-SSELSFWIPD 58 (69)
Q Consensus 8 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~-~~~~~~~~~~ 58 (69)
.++.+.+||+.+++ ...+..+...+..++|+|++..++.+ +.++.+|..+
T Consensus 99 ~~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~ 149 (706)
T 2z3z_A 99 TQGGLVGFDMLARK-VTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGG 149 (706)
T ss_dssp ETTEEEEEETTTTE-EEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECB
T ss_pred ECCEEEEEECCCCc-eEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecC
Confidence 35899999998775 45556667778889999999877765 5566666544
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.37 E-value=0.0003 Score=42.65 Aligned_cols=47 Identities=4% Similarity=0.115 Sum_probs=34.0
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCC-----CeEEEEcCCCcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTE-----PPVIKWTPGSLMFVTGSS 50 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~-----v~~v~~~~~~~~~~s~~~ 50 (69)
+++++ |+.|.+||+.++.....+..|... ...++|+|++..++.+..
T Consensus 30 ~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~ 81 (740)
T 4a5s_A 30 YLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYN 81 (740)
T ss_dssp EEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEE
T ss_pred EEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEEC
Confidence 45564 899999999998866666666532 234789999998777643
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.35 E-value=0.00027 Score=41.50 Aligned_cols=55 Identities=9% Similarity=0.071 Sum_probs=41.3
Q ss_pred EEEEEeCCC--cEEEEECCCCceEEEEeCCCCCCeEEE--------EcCCCcEEEEc--CCcEEEEcC
Q 035275 2 FVISGSGDG--SVYAWSVRSGKEVASWMSFDTEPPVIK--------WTPGSLMFVTG--SSELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d~--~v~~wd~~~~~~~~~~~~~~~~v~~v~--------~~~~~~~~~s~--~~~~~~~~~ 57 (69)
.++++..++ .|.+||+.+++.. .+..|...+..+. |+|++.+++++ +....+|..
T Consensus 208 ~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 208 VTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 566777788 8999999888765 6677776666666 99999777766 455777765
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.35 E-value=0.00089 Score=37.57 Aligned_cols=47 Identities=9% Similarity=0.118 Sum_probs=36.4
Q ss_pred CcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC-CcEEEEcCC
Q 035275 10 GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS-SELSFWIPD 58 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~~~~~~~~~ 58 (69)
+.|.+||..+++.+..+..+. ...+.|+|++..+.+++ ..+.+|...
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~ 333 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDIS 333 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECS
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECC
Confidence 479999999998888887776 78999999988766654 457776443
No 164
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.31 E-value=0.00028 Score=42.21 Aligned_cols=55 Identities=9% Similarity=0.134 Sum_probs=37.4
Q ss_pred EEEEEeCC---------CcEEEEECCCCceEEEEe---CCCCCCeEEEEcCCCcEEEEc-CCcEEEEcC
Q 035275 2 FVISGSGD---------GSVYAWSVRSGKEVASWM---SFDTEPPVIKWTPGSLMFVTG-SSELSFWIP 57 (69)
Q Consensus 2 ~~~s~~~d---------~~v~~wd~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~~s~-~~~~~~~~~ 57 (69)
++++++.+ +.+.+||+.++.. ..+. .|...+..++|+|++..++.+ +.++.+|..
T Consensus 74 ~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~ 141 (723)
T 1xfd_A 74 YALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAH 141 (723)
T ss_dssp EEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESS
T ss_pred EEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEEC
Confidence 56666653 6788999988764 3343 344557889999999887766 444555543
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.29 E-value=0.0016 Score=38.71 Aligned_cols=49 Identities=12% Similarity=0.221 Sum_probs=34.7
Q ss_pred cEEEEECC-CCc--eEEEE-eCCCCCCeEEEEcCCCcEEEEcCCc--EEEEcCCC
Q 035275 11 SVYAWSVR-SGK--EVASW-MSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPDL 59 (69)
Q Consensus 11 ~v~~wd~~-~~~--~~~~~-~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~~~ 59 (69)
.|.+||+. ++. ....+ ..|...+..+.|+|++.++++++.+ ..+|.++.
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECT
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEEC
Confidence 79999998 561 33344 4556778899999999877766443 47777764
No 166
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.29 E-value=0.00091 Score=36.68 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=34.9
Q ss_pred EEEEEe-CCCcEEEEECCC-Cc--eEEEEeCC---------CCCCeEEEEcCCCcEEEEc--CCcEEEEcCC
Q 035275 2 FVISGS-GDGSVYAWSVRS-GK--EVASWMSF---------DTEPPVIKWTPGSLMFVTG--SSELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~-~d~~v~~wd~~~-~~--~~~~~~~~---------~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~ 58 (69)
++++++ .++.+.+|++.. +. .+...... ...+.++.|+|++.++++. +..+.+|..+
T Consensus 99 ~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 99 LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 456666 678999999953 32 12222211 1236789999999866665 3346666554
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.24 E-value=0.00042 Score=41.55 Aligned_cols=47 Identities=11% Similarity=0.200 Sum_probs=33.3
Q ss_pred CCcEEEEECCCCceE--EEEeCCCCCCeEEEEcCCCcEEEEc-CCcEEEEcCC
Q 035275 9 DGSVYAWSVRSGKEV--ASWMSFDTEPPVIKWTPGSLMFVTG-SSELSFWIPD 58 (69)
Q Consensus 9 d~~v~~wd~~~~~~~--~~~~~~~~~v~~v~~~~~~~~~~s~-~~~~~~~~~~ 58 (69)
++.|.+||+.+++.. ..+ ...+..++|+|++..++.+ +.++.+|..+
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~~~~i~~~~~~ 138 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVYQNNIYLKQRP 138 (719)
T ss_dssp EEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEETTEEEEESST
T ss_pred ceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEECCeEEEEeCC
Confidence 688999999887641 222 2457789999999887765 5566666543
No 168
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.23 E-value=0.00087 Score=37.78 Aligned_cols=55 Identities=16% Similarity=0.126 Sum_probs=33.4
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~ 58 (69)
.+++++.|+.|..||..+|+..+.+.. +.+.+..+..++..++.++.+..++.+|
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d 65 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLG 65 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEE
Confidence 578889999999999999998887765 4444443445565566543333333344
No 169
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.15 E-value=0.0012 Score=39.58 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=41.3
Q ss_pred EEEEEeCCCcEEEEECC-CCceEEEEeCCCCCCeE-EEEcCCCcEEE-EcCC----cEEEEcCCCC
Q 035275 2 FVISGSGDGSVYAWSVR-SGKEVASWMSFDTEPPV-IKWTPGSLMFV-TGSS----ELSFWIPDLS 60 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~-~~~~~~~~~~~~~~v~~-v~~~~~~~~~~-s~~~----~~~~~~~~~~ 60 (69)
++++++.|+.+.+|+++ ++.....+..+...+.. +.|+|++..++ ++.. ...+|.++..
T Consensus 325 ~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 325 FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 56778888888888876 55666777777777765 79999987554 3322 3577777653
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.14 E-value=0.008 Score=32.10 Aligned_cols=56 Identities=7% Similarity=0.071 Sum_probs=36.8
Q ss_pred EEEEEeCCC-cEEEEECCCCceEEEEeCCCC--CCeEEEEcCCCcEEEEc-CCcEEEEcCC
Q 035275 2 FVISGSGDG-SVYAWSVRSGKEVASWMSFDT--EPPVIKWTPGSLMFVTG-SSELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~-~v~~wd~~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~s~-~~~~~~~~~~ 58 (69)
.+++...++ .|.+|+. +++.+..+..+.. .+..+++.|++.++++. +..+.+|.+.
T Consensus 220 l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 220 ILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp EEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred EEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 345555565 8999996 4555555544432 35689999999887775 4457777543
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.02 E-value=0.00079 Score=37.10 Aligned_cols=52 Identities=12% Similarity=0.176 Sum_probs=37.4
Q ss_pred CCcEEEEECCCCceEEEEe---CCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCC
Q 035275 9 DGSVYAWSVRSGKEVASWM---SFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~ 60 (69)
+..|.+|+..+++.+..+. .+......++++|++.++++...+-+|+.|+..
T Consensus 267 ~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 267 PVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred CcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 3489999998888776663 455567899999999888887555455544443
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.94 E-value=0.011 Score=32.49 Aligned_cols=49 Identities=10% Similarity=0.005 Sum_probs=34.6
Q ss_pred CcEEEEECCCCceEEEEe-CCCCCCeEEEEcCCCcEEEEcCCc--EEEEcCC
Q 035275 10 GSVYAWSVRSGKEVASWM-SFDTEPPVIKWTPGSLMFVTGSSE--LSFWIPD 58 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~~ 58 (69)
+.|.+||..+++....+. .+-.....+++.|++.++++...+ +..|..+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~ 120 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPH 120 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 469999998888665554 344456899999999988876443 5555544
No 173
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.90 E-value=0.0058 Score=36.66 Aligned_cols=57 Identities=7% Similarity=-0.038 Sum_probs=39.5
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~ 59 (69)
++++...++.|.++|..+++.+..+.... ....+.|+|++..+..++.+..+..+|.
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~ 225 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDL 225 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEEC
Confidence 45677778899999999998777765332 3458999999987665544434444444
No 174
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.90 E-value=0.015 Score=31.21 Aligned_cols=57 Identities=12% Similarity=0.183 Sum_probs=38.2
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCc-EEEEcCC--cEEEEcCCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGSS--ELSFWIPDL 59 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~~--~~~~~~~~~ 59 (69)
+++...++.|..||..+++....+..+...+.++.++|++. ++++... .+..+..+.
T Consensus 240 ~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 240 LVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 44545667899999876665555555656678999999987 6666544 455554443
No 175
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=96.84 E-value=0.011 Score=34.05 Aligned_cols=56 Identities=16% Similarity=0.178 Sum_probs=39.2
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~ 58 (69)
+++++ .++.|.+||+.+.........|...+..+.+.+....+++.++.+.+|...
T Consensus 99 ~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 99 QVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLR 154 (388)
T ss_dssp EEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETT
T ss_pred EEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEcc
Confidence 46666 778999999987665555667777788888776543444556677777543
No 176
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.78 E-value=0.0042 Score=34.27 Aligned_cols=57 Identities=14% Similarity=0.164 Sum_probs=36.0
Q ss_pred EEEEEe-CCCcEEEEECCCCce--EEEEe---CCCCCCeEEEEcCCCcEEE-EcC---CcEEEEcCC
Q 035275 2 FVISGS-GDGSVYAWSVRSGKE--VASWM---SFDTEPPVIKWTPGSLMFV-TGS---SELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~-~d~~v~~wd~~~~~~--~~~~~---~~~~~v~~v~~~~~~~~~~-s~~---~~~~~~~~~ 58 (69)
++++++ .++.|.+|++.++.. ...+. .+......+.|+|++..+. +.. ..+.+|..+
T Consensus 224 ~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 224 FAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 454555 578999999986643 22232 2233457899999998664 432 347777665
No 177
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.75 E-value=0.017 Score=32.17 Aligned_cols=51 Identities=16% Similarity=0.038 Sum_probs=34.0
Q ss_pred CCCcEEEEECCC-CceEEEEe----CCCCCCeEEEEcCCCcEEEEc---CCcEEEEcCC
Q 035275 8 GDGSVYAWSVRS-GKEVASWM----SFDTEPPVIKWTPGSLMFVTG---SSELSFWIPD 58 (69)
Q Consensus 8 ~d~~v~~wd~~~-~~~~~~~~----~~~~~v~~v~~~~~~~~~~s~---~~~~~~~~~~ 58 (69)
.++.+.+|+++. +.....+. .+...+.++.|+|++..++++ +..+.+|..+
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~ 175 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKL 175 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEEC
Confidence 678999999973 54333332 245567899999999766554 3346666654
No 178
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.64 E-value=0.03 Score=31.13 Aligned_cols=58 Identities=12% Similarity=0.143 Sum_probs=37.8
Q ss_pred EEEEEe-CCCcEEEEECC-CCceE--EEEe--CCCCCCeEEEEcCCCcEEEEc---CCcEEEEcCCC
Q 035275 2 FVISGS-GDGSVYAWSVR-SGKEV--ASWM--SFDTEPPVIKWTPGSLMFVTG---SSELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~-~d~~v~~wd~~-~~~~~--~~~~--~~~~~v~~v~~~~~~~~~~s~---~~~~~~~~~~~ 59 (69)
+++++. .++.|.+|++. +++.. ..+. .|...+..+.|+|++..++.+ +..+.+|.++.
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 224 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeC
Confidence 455544 35689999998 66532 2233 234567889999999766544 34578887664
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.59 E-value=0.025 Score=30.70 Aligned_cols=48 Identities=10% Similarity=0.050 Sum_probs=35.8
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCc
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE 51 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~ 51 (69)
++++...++.|..||.. ++.++.+.... ....+...+++..++++...
T Consensus 138 ~lv~~~~~~~v~~~d~~-G~~~w~~~~~~-~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 138 YLVPLFATSEVREIAPN-GQLLNSVKLSG-TPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEEECSS-CCCEEEECTTSCEEEECBTT
T ss_pred EEEEecCCCEEEEECCC-CCEEEEEECCC-CccceeEcCCCCEEEEeCCC
Confidence 57778888999999987 88888876543 34567778888877776433
No 180
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.55 E-value=0.0068 Score=33.55 Aligned_cols=53 Identities=17% Similarity=0.344 Sum_probs=35.9
Q ss_pred eCCCcEEEEECCCCceEEEEeCCCC-----------CCeEEEEcCCCcEEEEc---CCcEEEEcCCCC
Q 035275 7 SGDGSVYAWSVRSGKEVASWMSFDT-----------EPPVIKWTPGSLMFVTG---SSELSFWIPDLS 60 (69)
Q Consensus 7 ~~d~~v~~wd~~~~~~~~~~~~~~~-----------~v~~v~~~~~~~~~~s~---~~~~~~~~~~~~ 60 (69)
..+..|.+||+.++. ...+..+.. .+..++|+|++..++.. +....+|..+..
T Consensus 317 ~~~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 317 ENDPFLYVFNMKNGT-QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp CCCCEEEEEETTTTE-EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred CCCCEEEEEeccCCc-eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 445689999998775 455555554 46788999999766543 335677776554
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.50 E-value=0.0094 Score=32.89 Aligned_cols=54 Identities=20% Similarity=0.222 Sum_probs=37.6
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIP 57 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~ 57 (69)
+++...++.|.++|..+++.+..+.. ......+.+++++.++++. +..+.++..
T Consensus 57 yv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~ 112 (328)
T 3dsm_A 57 WIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINP 112 (328)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEET
T ss_pred EEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 44555678999999999987777743 3445788898888777765 344555543
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.46 E-value=0.031 Score=30.04 Aligned_cols=58 Identities=14% Similarity=0.312 Sum_probs=36.0
Q ss_pred EEEEeCCCcEEEEECC-CCce---EEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCC
Q 035275 3 VISGSGDGSVYAWSVR-SGKE---VASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~-~~~~---~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~ 60 (69)
+++...++.|.+|++. ++.. ...+..+.+.+.++.+.+++.++++.+..+.+|.++..
T Consensus 186 lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~g~ 247 (296)
T 3e5z_A 186 LVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTPDGD 247 (296)
T ss_dssp EEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEETTEEEEECTTSC
T ss_pred EEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEECCCCC
Confidence 4555566788888886 4432 12222344455678888888877776555777666543
No 183
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.39 E-value=0.03 Score=29.83 Aligned_cols=55 Identities=13% Similarity=0.185 Sum_probs=36.5
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCC--CCCCeEEEEcCCCcEEEEcCC---cEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSF--DTEPPVIKWTPGSLMFVTGSS---ELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~--~~~v~~v~~~~~~~~~~s~~~---~~~~~~~~ 58 (69)
+++...++.|.+||. ++..+..+..+ ......+++++++.++++... .+.+|..+
T Consensus 178 ~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 178 FISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred EEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 455556788999997 45545555433 345678999999988887633 45665543
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.38 E-value=0.022 Score=29.94 Aligned_cols=55 Identities=7% Similarity=0.023 Sum_probs=33.5
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCc--EEEEcC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSE--LSFWIP 57 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~--~~~~~~ 57 (69)
+++...++.|.+|+............+...+.++.+.+++.++++...+ +.++..
T Consensus 206 ~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 206 YVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp EEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred EEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 3444456789999886544322112233456889999998887776444 555443
No 185
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.31 E-value=0.0031 Score=37.47 Aligned_cols=58 Identities=9% Similarity=-0.088 Sum_probs=37.8
Q ss_pred EEEEEeCC----------CcEEEEECCC------CceEEEEe-CCCCCCeEEEEcCCCcEEEEc--CC------cEEEEc
Q 035275 2 FVISGSGD----------GSVYAWSVRS------GKEVASWM-SFDTEPPVIKWTPGSLMFVTG--SS------ELSFWI 56 (69)
Q Consensus 2 ~~~s~~~d----------~~v~~wd~~~------~~~~~~~~-~~~~~v~~v~~~~~~~~~~s~--~~------~~~~~~ 56 (69)
.|++++.+ ..|.+||+.+ +. ...+. .+...+..++|+|++..++.+ +. ...+|+
T Consensus 143 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~ 221 (662)
T 3azo_A 143 EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKT 221 (662)
T ss_dssp EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEE
T ss_pred EEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEE
Confidence 45666655 4799999987 44 44555 555566678899999877654 22 245666
Q ss_pred CCCC
Q 035275 57 PDLS 60 (69)
Q Consensus 57 ~~~~ 60 (69)
++..
T Consensus 222 ~d~~ 225 (662)
T 3azo_A 222 ARVT 225 (662)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6554
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.30 E-value=0.022 Score=31.98 Aligned_cols=41 Identities=12% Similarity=0.230 Sum_probs=31.4
Q ss_pred EEEEEeCCCcEEEEECCCC--ceEEEEeCCCCCCeEEEEcCCCc
Q 035275 2 FVISGSGDGSVYAWSVRSG--KEVASWMSFDTEPPVIKWTPGSL 43 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~--~~~~~~~~~~~~v~~v~~~~~~~ 43 (69)
++++++. +.|.+||..++ +.+..+..+......+.++|++.
T Consensus 318 ~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 318 LMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 5666666 89999999999 77767655555567889999864
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.05 E-value=0.029 Score=30.57 Aligned_cols=36 Identities=6% Similarity=0.137 Sum_probs=23.9
Q ss_pred cEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc
Q 035275 11 SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 11 ~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~ 48 (69)
.|.+|++.+++.. .+..+.. +..+.|+|++..++.+
T Consensus 86 ~l~~~~~~~g~~~-~l~~~~~-~~~~~wspdg~~l~~~ 121 (347)
T 2gop_A 86 EIWVADLETLSSK-KILEAKN-IRSLEWNEDSRKLLIV 121 (347)
T ss_dssp EEEEEETTTTEEE-EEEEESE-EEEEEECTTSSEEEEE
T ss_pred eEEEEECCCCceE-EEEcCCC-ccceeECCCCCEEEEE
Confidence 3778888776543 3322233 7899999999766654
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.98 E-value=0.012 Score=35.61 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=24.9
Q ss_pred cEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc
Q 035275 11 SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 11 ~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~ 48 (69)
.|.+||+.+++.......+ ..+..++|+|++..++.+
T Consensus 152 ~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~ 188 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYN 188 (710)
T ss_dssp EEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEE
T ss_pred EEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEE
Confidence 7999999888754322111 225678999998766544
No 189
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.98 E-value=0.074 Score=28.80 Aligned_cols=56 Identities=7% Similarity=-0.005 Sum_probs=37.8
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~ 60 (69)
+++...++.|..||..++.. ..+. ....+.++.+.|++.++++....+..+.++..
T Consensus 28 ~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g 83 (297)
T 3g4e_A 28 LFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVATIGTKFCALNWKEQ 83 (297)
T ss_dssp EEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEEETTEEEEEETTTT
T ss_pred EEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEEECCeEEEEECCCC
Confidence 45555667899999877653 2332 34567899999999877776555666655433
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.93 E-value=0.036 Score=33.54 Aligned_cols=58 Identities=5% Similarity=-0.179 Sum_probs=37.2
Q ss_pred EEEEEeCCCc-------------EEEEECCCCce--EEEE--eCCCCCCeEEEEcCCCcEEEEc--C--CcEEEEcCCC
Q 035275 2 FVISGSGDGS-------------VYAWSVRSGKE--VASW--MSFDTEPPVIKWTPGSLMFVTG--S--SELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~-------------v~~wd~~~~~~--~~~~--~~~~~~v~~v~~~~~~~~~~s~--~--~~~~~~~~~~ 59 (69)
.|+.++.|.. |.+|++.++.. .... ..+...+..+.|+|++..++.+ + ....+|+++.
T Consensus 181 ~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 181 GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECT
T ss_pred EEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcC
Confidence 4666666654 99999987752 2222 3455567789999998765543 3 2456676654
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.89 E-value=0.017 Score=31.85 Aligned_cols=46 Identities=7% Similarity=-0.114 Sum_probs=27.2
Q ss_pred cEEEEECCCCceEEEEeCCCCC-CeEEEEcCCCcEEEEcCC--cEEEEcC
Q 035275 11 SVYAWSVRSGKEVASWMSFDTE-PPVIKWTPGSLMFVTGSS--ELSFWIP 57 (69)
Q Consensus 11 ~v~~wd~~~~~~~~~~~~~~~~-v~~v~~~~~~~~~~s~~~--~~~~~~~ 57 (69)
.|.+||+.+++ ...+..+... ...+.|+|++..++.... ++.+|..
T Consensus 61 ~l~~~d~~~~~-~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~ 109 (396)
T 3c5m_A 61 NYYLLNLETQQ-AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDL 109 (396)
T ss_dssp EEEEEETTTTE-EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEET
T ss_pred eEEEEECCCCc-EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEEC
Confidence 68888987775 3444333333 234779999987765533 3444443
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.77 E-value=0.043 Score=33.01 Aligned_cols=54 Identities=13% Similarity=0.064 Sum_probs=37.1
Q ss_pred CEEEEEeCCCcEEEEECC--CCceEEEEeCCCCCCeEEEEc----CCCcEEEEc---CCcEEEE
Q 035275 1 MFVISGSGDGSVYAWSVR--SGKEVASWMSFDTEPPVIKWT----PGSLMFVTG---SSELSFW 55 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~--~~~~~~~~~~~~~~v~~v~~~----~~~~~~~s~---~~~~~~~ 55 (69)
+++.+++.|+.|.+||+. +++.+..+..... ...+.|+ |++..+..+ +..+.++
T Consensus 209 r~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 209 RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp CEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEE
Confidence 467778889999999995 6666666654333 3688999 688766554 3345554
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.73 E-value=0.0041 Score=37.55 Aligned_cols=44 Identities=20% Similarity=0.173 Sum_probs=26.8
Q ss_pred EEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc
Q 035275 5 SGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 5 s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~ 48 (69)
+|+++..|.+||+.+++..............++|+|++..++.+
T Consensus 142 ~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~ 185 (695)
T 2bkl_A 142 NAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYE 185 (695)
T ss_dssp TTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEE
T ss_pred CCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEE
Confidence 34445689999998887430101111112578899998876654
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.70 E-value=0.054 Score=28.46 Aligned_cols=56 Identities=14% Similarity=0.133 Sum_probs=34.4
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
+++...++.|.+||............+.....++.+.+++.++++.. ..+..+..+
T Consensus 164 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 164 YVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp EEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred EEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 34444456888888866553322223335567899999988777763 346665544
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.51 E-value=0.062 Score=32.60 Aligned_cols=49 Identities=8% Similarity=0.036 Sum_probs=29.9
Q ss_pred EEEEECCCCce--EEEEe--CCCCCCeEEEEcCCCcEEEEcC--C---cEEEEcCCCC
Q 035275 12 VYAWSVRSGKE--VASWM--SFDTEPPVIKWTPGSLMFVTGS--S---ELSFWIPDLS 60 (69)
Q Consensus 12 v~~wd~~~~~~--~~~~~--~~~~~v~~v~~~~~~~~~~s~~--~---~~~~~~~~~~ 60 (69)
|.+|++.++.. ..... .|...+..+.|+|++..++... . +..+|+++..
T Consensus 210 v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 210 LYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred EEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECc
Confidence 99999987652 22222 2445567889999997666431 1 3455555543
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.50 E-value=0.065 Score=29.20 Aligned_cols=54 Identities=9% Similarity=0.088 Sum_probs=35.3
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc-CCc-EEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG-SSE-LSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~-~~~-~~~~~~~ 58 (69)
.+++++.++.+.+| +++++ ...+..+.+.+..+.|+| ...++.. +.. ..+|.++
T Consensus 275 ~~~~~~~~~~~~l~-~~~g~-~~~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 275 VYFTLFEEGSVNLY-IWDGE-IKPIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEEEETTEEEEE-EESSS-EEEEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred EEEEEecCCcEEEE-EcCCc-eEEEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 35677888889999 77554 344445567788899999 4333333 333 4788776
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.31 E-value=0.11 Score=28.10 Aligned_cols=45 Identities=16% Similarity=0.112 Sum_probs=32.5
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEc-CCCc-EEEE
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWT-PGSL-MFVT 47 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~-~~~~-~~~s 47 (69)
.++...++.|..||..+++.+..+..+...+.+++|. |++. ++++
T Consensus 213 wva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 213 WVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp EEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred EEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEE
Confidence 4444556679999998888777777776778899998 7643 4444
No 198
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=95.30 E-value=0.15 Score=27.64 Aligned_cols=55 Identities=13% Similarity=0.050 Sum_probs=36.9
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
.+++...++.|..|+. ++. ...+..+...+..+.+.+++.++++... .+..+..+
T Consensus 59 l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 3566777788999987 454 3444445566789999999988777543 35554443
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.03 E-value=0.11 Score=27.81 Aligned_cols=52 Identities=17% Similarity=0.271 Sum_probs=33.8
Q ss_pred EeCCCcEEEEECCCCceEEEEeC-----CCCCCeEEEEcCC-CcEEEEcC-CcEEEEcCC
Q 035275 6 GSGDGSVYAWSVRSGKEVASWMS-----FDTEPPVIKWTPG-SLMFVTGS-SELSFWIPD 58 (69)
Q Consensus 6 ~~~d~~v~~wd~~~~~~~~~~~~-----~~~~v~~v~~~~~-~~~~~s~~-~~~~~~~~~ 58 (69)
+..++.|..||..+++.. .+.. +...+..+.+.++ +.++++.. ..+..|..+
T Consensus 42 ~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~ 100 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD 100 (314)
T ss_dssp TEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT
T ss_pred CCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC
Confidence 355678999998777642 3322 4456788999998 87666653 345555544
No 200
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.93 E-value=0.2 Score=27.14 Aligned_cols=51 Identities=8% Similarity=-0.041 Sum_probs=34.0
Q ss_pred CcEEEEECCCCceEEEEe--CCCCCCeEEEEcCCCcEEEEcCC------cEEEEcCCCC
Q 035275 10 GSVYAWSVRSGKEVASWM--SFDTEPPVIKWTPGSLMFVTGSS------ELSFWIPDLS 60 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~s~~~------~~~~~~~~~~ 60 (69)
+.|.+||..++.....+. .+...+..+.+.|++.++++... ...+|.++..
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp CEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred ceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence 578999987765432332 23456788999999988877542 4667766643
No 201
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.86 E-value=0.16 Score=31.19 Aligned_cols=45 Identities=20% Similarity=0.358 Sum_probs=32.4
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCC-CeEEEEcCCCcEEE
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTE-PPVIKWTPGSLMFV 46 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~-v~~v~~~~~~~~~~ 46 (69)
.++.++.||.++.||.++++.+..+....+. ..-+.|..++..++
T Consensus 488 lvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 488 LVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred EEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence 5778899999999999999998887544322 23466766765443
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=94.73 E-value=0.28 Score=27.82 Aligned_cols=51 Identities=12% Similarity=-0.074 Sum_probs=33.6
Q ss_pred CcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCc-EEEEcC-CcEEEEcCCCCC
Q 035275 10 GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTGS-SELSFWIPDLSK 61 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~~-~~~~~~~~~~~~ 61 (69)
+.|.+.|..+++.+..+..- +....+.|+|++. .+.++. .+-.++++|...
T Consensus 298 ~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CeEEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 46888999888877777432 2457899999987 555543 344455555443
No 203
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.69 E-value=0.01 Score=33.48 Aligned_cols=54 Identities=15% Similarity=0.200 Sum_probs=22.3
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~ 60 (69)
+++++.++.+..||..+|+....+..+. ...++|.+..+..++.+..+..+|..
T Consensus 95 v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~ 148 (369)
T 2hz6_A 95 LYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTK 148 (369)
T ss_dssp CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSS
T ss_pred EEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECC
Confidence 4556678899999999998776664442 23455666566665555566666654
No 204
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.65 E-value=0.18 Score=27.81 Aligned_cols=51 Identities=16% Similarity=0.235 Sum_probs=31.6
Q ss_pred CCcEEEEECCCCceEEEEeCCCC-----------CCeEEEEcCCCcEEEEc---CCcEEEEcCCCC
Q 035275 9 DGSVYAWSVRSGKEVASWMSFDT-----------EPPVIKWTPGSLMFVTG---SSELSFWIPDLS 60 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~~~~~~-----------~v~~v~~~~~~~~~~s~---~~~~~~~~~~~~ 60 (69)
+..|.+||+.++.. ..+..+.. ....+.|+|++..++.. +....+|..+..
T Consensus 319 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~ 383 (396)
T 3c5m_A 319 DPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVP 383 (396)
T ss_dssp CCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred CCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEc
Confidence 46799999987753 34444433 24567899998766543 234567765543
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.63 E-value=0.27 Score=27.07 Aligned_cols=54 Identities=7% Similarity=-0.013 Sum_probs=35.8
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~ 58 (69)
+++...++.|..||..++.. ..+. ....+.++.+.|++.++++....+..+.++
T Consensus 64 ~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~ 117 (326)
T 2ghs_A 64 WWFNILERELHELHLASGRK-TVHA-LPFMGSALAKISDSKQLIASDDGLFLRDTA 117 (326)
T ss_dssp EEEEGGGTEEEEEETTTTEE-EEEE-CSSCEEEEEEEETTEEEEEETTEEEEEETT
T ss_pred EEEECCCCEEEEEECCCCcE-EEEE-CCCcceEEEEeCCCeEEEEECCCEEEEECC
Confidence 45555667899999876653 3332 245678899999998877765445555443
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=94.62 E-value=0.33 Score=28.10 Aligned_cols=38 Identities=3% Similarity=-0.150 Sum_probs=27.9
Q ss_pred CCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc
Q 035275 9 DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~ 48 (69)
++.|.+.|..+++.+..+..-..+ .+.++|++..+..+
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVa 95 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHA 95 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEE
T ss_pred CCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEE
Confidence 568999999999887777543344 49999998755443
No 207
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.46 E-value=0.1 Score=28.75 Aligned_cols=57 Identities=14% Similarity=0.125 Sum_probs=34.9
Q ss_pred EEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCCCcC
Q 035275 4 ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSKLG 63 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~~~~ 63 (69)
.....++.+.++|..+.+.+.++..... ...+++++..+..++.+-.++.+|...++
T Consensus 101 ~ltw~~~~v~v~D~~t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~ 157 (262)
T 3nol_A 101 GLTWKNGLGFVWNIRNLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLT 157 (262)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCS
T ss_pred EEEeeCCEEEEEECccCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCe
Confidence 3445577899999999988877754322 22334455555555555556666665543
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.38 E-value=0.29 Score=28.62 Aligned_cols=52 Identities=8% Similarity=-0.142 Sum_probs=35.3
Q ss_pred CcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC----------CcEEEEcCCCCCcC
Q 035275 10 GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS----------SELSFWIPDLSKLG 63 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~----------~~~~~~~~~~~~~~ 63 (69)
+.|.+.|..+.+.+..+..-..+ .+.++|++..+..++ .+-.+..+|...++
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 68999999999887777543344 799999987554432 23456666665443
No 209
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=94.32 E-value=0.32 Score=26.76 Aligned_cols=48 Identities=6% Similarity=-0.105 Sum_probs=32.6
Q ss_pred CcEEEEECCCCceEEEEeCC-CCCCeEEEEcCCCcEEEEcCCcEEEEcC
Q 035275 10 GSVYAWSVRSGKEVASWMSF-DTEPPVIKWTPGSLMFVTGSSELSFWIP 57 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~-~~~v~~v~~~~~~~~~~s~~~~~~~~~~ 57 (69)
+.|.++|..+++....+... ......++++|++..+..++..+.++..
T Consensus 203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~~v~~~d~ 251 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPV 251 (328)
T ss_dssp CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESSSEEEEET
T ss_pred ceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEccEEEEEEC
Confidence 68999999888765555432 2356899999987766555555554443
No 210
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=94.05 E-value=0.44 Score=27.27 Aligned_cols=50 Identities=8% Similarity=-0.083 Sum_probs=33.7
Q ss_pred cEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC----------CcEEEEcCCCCCc
Q 035275 11 SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS----------SELSFWIPDLSKL 62 (69)
Q Consensus 11 ~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~----------~~~~~~~~~~~~~ 62 (69)
.|.+.|..+++.+..+..-..+ .+.++|++..+..++ .+-.+..+|....
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 7889999999888777543344 799999986544442 2455566665543
No 211
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.96 E-value=0.27 Score=27.23 Aligned_cols=58 Identities=7% Similarity=-0.043 Sum_probs=35.1
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCCCcC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSKLG 63 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~~~~ 63 (69)
+.....++.+.++|..+.+.+.++...... ..+.+++..+..++.+-.++.+|...++
T Consensus 109 y~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG---wGLt~Dg~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 109 YQLTWTEGLLFTWSGMPPQRERTTRYSGEG---WGLCYWNGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp EEEESSSCEEEEEETTTTEEEEEEECSSCC---CCEEEETTEEEEECSSSEEEEECTTTCC
T ss_pred EEEEccCCEEEEEECCcCcEEEEEeCCCce---eEEecCCCEEEEECCCCEEEEEcCCCCe
Confidence 344566789999999999888777543222 2233445554444455566666665543
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=93.83 E-value=0.47 Score=26.90 Aligned_cols=36 Identities=8% Similarity=-0.121 Sum_probs=26.3
Q ss_pred cEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc
Q 035275 11 SVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 11 ~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~ 48 (69)
.|.++|..+++.+..+..-..+ .+.++|++..+..+
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~ 83 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALA 83 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEE
Confidence 7899999988876666433333 89999998765554
No 213
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.80 E-value=0.21 Score=27.17 Aligned_cols=58 Identities=7% Similarity=-0.056 Sum_probs=34.9
Q ss_pred EEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCCCcCc
Q 035275 4 ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSKLGA 64 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 64 (69)
.....++.+.++|..+.+.+.++...... -.+ .+++..+..++.+-.++.+|...++.
T Consensus 79 ~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wgl--t~dg~~L~vSdgs~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 79 QLTWRNHEGFVYDLATLTPRARFRYPGEG-WAL--TSDDSHLYMSDGTAVIRKLDPDTLQQ 136 (243)
T ss_dssp EEESSSSEEEEEETTTTEEEEEEECSSCC-CEE--EECSSCEEEECSSSEEEEECTTTCCE
T ss_pred EEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEE--eeCCCEEEEECCCCeEEEEeCCCCeE
Confidence 34556788999999998887777543222 233 34444444444455566666665443
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.00 E-value=0.35 Score=29.62 Aligned_cols=37 Identities=5% Similarity=0.057 Sum_probs=23.6
Q ss_pred cEEEEECCCCce--EEEEeC--CCCCCeEEEEcCCCcEEEE
Q 035275 11 SVYAWSVRSGKE--VASWMS--FDTEPPVIKWTPGSLMFVT 47 (69)
Q Consensus 11 ~v~~wd~~~~~~--~~~~~~--~~~~v~~v~~~~~~~~~~s 47 (69)
.|.+|++.++.. ...... +...+..+.|+|++..++.
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~ 284 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVI 284 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEE
Confidence 388999877652 222332 3334678899999976554
No 215
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.90 E-value=0.33 Score=26.67 Aligned_cols=59 Identities=3% Similarity=-0.073 Sum_probs=33.5
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCCCcC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLSKLG 63 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~~~~ 63 (69)
..+...++.+.++|..+.+.+..+..-.. ....+++++..+..++.+-.++..|...++
T Consensus 79 yv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 79 YQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp EEEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCC
T ss_pred EEEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCc
Confidence 34455667999999998887777643211 123345555433333344466666655433
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.78 E-value=0.45 Score=27.28 Aligned_cols=54 Identities=13% Similarity=-0.023 Sum_probs=31.7
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
+++...++.|..||..++...........+ . ++++|++..+..++. ...+|.++
T Consensus 145 yv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 145 LAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEBSSTTCEEEEEE
T ss_pred EEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEecCCCceEEEEE
Confidence 344445578999998776644333333222 3 889999876665533 22555444
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.64 E-value=0.81 Score=26.22 Aligned_cols=56 Identities=5% Similarity=-0.035 Sum_probs=32.1
Q ss_pred EEEEeCCCcEEEEECCCCceEEE----EeCCCCCC-e-EEEEcC-CCcEEEEcCCcEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVAS----WMSFDTEP-P-VIKWTP-GSLMFVTGSSELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~----~~~~~~~v-~-~v~~~~-~~~~~~s~~~~~~~~~~~ 58 (69)
+..+..++.|..||..++..... ..++.+.- . .+.|+| ++.++++...+-.++.++
T Consensus 233 lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~ 295 (409)
T 3hrp_A 233 LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKIT 295 (409)
T ss_dssp EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEe
Confidence 44456677899999877653222 12222222 2 899999 477777654443444433
No 218
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.64 E-value=0.59 Score=24.62 Aligned_cols=52 Identities=10% Similarity=0.178 Sum_probs=32.4
Q ss_pred EEEeCCCcEEEEECCCCceEEEE--eCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcC
Q 035275 4 ISGSGDGSVYAWSVRSGKEVASW--MSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIP 57 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~ 57 (69)
++...++.|..||.. +. ...+ ..+...+..+.+.+++.++++... .+..+..
T Consensus 30 v~~~~~~~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 30 ITQHKANMISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITK 85 (299)
T ss_dssp EEETTTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EEecCCCcEEEEcCC-CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECC
Confidence 333336789999987 54 3333 234456788999999888777643 3444433
No 219
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.30 E-value=0.67 Score=24.42 Aligned_cols=53 Identities=9% Similarity=0.055 Sum_probs=31.7
Q ss_pred EEEEeCCCcEEEEECCCCceEEE-EeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEc
Q 035275 3 VISGSGDGSVYAWSVRSGKEVAS-WMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWI 56 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~-~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~ 56 (69)
+++...++.|..||. ++..... .......+..+.+.+++.++++... .+..+.
T Consensus 113 ~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 113 WFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence 344445667888887 5543222 2333455688899999888776533 344443
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=92.27 E-value=0.27 Score=28.44 Aligned_cols=52 Identities=17% Similarity=0.039 Sum_probs=32.6
Q ss_pred CCcEEEEECCCCceEEEEeCCC-------CCCeEEEEcCCCcEEEEcC--CcEEEEcCCCC
Q 035275 9 DGSVYAWSVRSGKEVASWMSFD-------TEPPVIKWTPGSLMFVTGS--SELSFWIPDLS 60 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~~~~~-------~~v~~v~~~~~~~~~~s~~--~~~~~~~~~~~ 60 (69)
++.|.+||..+.+....+.... .....+.++|++..+..+. .+-.++++|..
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence 5679999999988777664221 1345788999987654432 23344444444
No 221
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.73 E-value=1.1 Score=27.15 Aligned_cols=45 Identities=29% Similarity=0.552 Sum_probs=31.1
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCC-eEEEEcCCCcEEE
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFV 46 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v-~~v~~~~~~~~~~ 46 (69)
.++.++.|+.++.+|.++++.+..+....+.. .-+.|..++..++
T Consensus 499 lvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 499 LVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred EEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 46778999999999999999988875443321 2255555665433
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=91.45 E-value=0.38 Score=27.51 Aligned_cols=40 Identities=10% Similarity=-0.120 Sum_probs=28.5
Q ss_pred CCcEEEEECCCCceEEEEeCC--C-----CCCeEEEEcCCCcEEEEc
Q 035275 9 DGSVYAWSVRSGKEVASWMSF--D-----TEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~~~~--~-----~~v~~v~~~~~~~~~~s~ 48 (69)
++.|.++|..+++....+... . .....+.++|++..+..+
T Consensus 95 ~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVa 141 (368)
T 1mda_H 95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFF 141 (368)
T ss_dssp EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEE
Confidence 568999999999887776433 0 224578899998655543
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=91.27 E-value=1.3 Score=27.26 Aligned_cols=44 Identities=14% Similarity=0.224 Sum_probs=30.8
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCC-CCCeEEEEcCCCcEE
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFD-TEPPVIKWTPGSLMF 45 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~ 45 (69)
.++.++.||.+.+||..+++.+..+.... ....-+.|.+++..+
T Consensus 490 ~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 490 VVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQY 534 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred EEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEE
Confidence 46778899999999999999888875332 222345566666543
No 224
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=90.58 E-value=1.3 Score=24.52 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=21.9
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMS 28 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~ 28 (69)
.++.++.+|.+..+|..+++.+.....
T Consensus 320 ~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 320 NLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 467788889999999999987776654
No 225
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=90.56 E-value=0.46 Score=26.30 Aligned_cols=59 Identities=12% Similarity=-0.046 Sum_probs=35.6
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCe--EEEEcCCCcEEEEcCCcEEEEcCCCCCcC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPP--VIKWTPGSLMFVTGSSELSFWIPDLSKLG 63 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~--~v~~~~~~~~~~s~~~~~~~~~~~~~~~~ 63 (69)
++.+.+.+|.|...|+.+++.+..+ -. .... .+.+..+ .++.+.-.+-.++.+|..+++
T Consensus 67 Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 67 FFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp EEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTE
T ss_pred EEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCc
Confidence 4567778888999999999876555 22 2233 3555544 344444445555666655544
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=90.02 E-value=1.5 Score=24.25 Aligned_cols=47 Identities=0% Similarity=-0.074 Sum_probs=30.0
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeC-CCCCCeEEEEcCCCcEEEEcC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMS-FDTEPPVIKWTPGSLMFVTGS 49 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~s~~ 49 (69)
+++...++.|.+||..+++....... +......++|.+++.++++..
T Consensus 262 ~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 262 YVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred EEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 45555667899999855653222222 123457899999888877764
No 227
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=90.01 E-value=0.61 Score=28.60 Aligned_cols=58 Identities=12% Similarity=-0.026 Sum_probs=33.8
Q ss_pred EEEEEeCCCcEEEEECC-CCceEEEEeC-CCCCCeEEEEcCCCcEEE-E---cCCcEEEEcCCC
Q 035275 2 FVISGSGDGSVYAWSVR-SGKEVASWMS-FDTEPPVIKWTPGSLMFV-T---GSSELSFWIPDL 59 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~-~~~~~~~~~~-~~~~v~~v~~~~~~~~~~-s---~~~~~~~~~~~~ 59 (69)
.+++...|+...+|..+ ++.....+.. +.+.+..+.++|++..++ + ......++.+|.
T Consensus 376 lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 376 LFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred EEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 45677778866666543 3544555543 356677888888765333 2 233455666554
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=89.63 E-value=1.6 Score=23.99 Aligned_cols=44 Identities=18% Similarity=0.353 Sum_probs=29.3
Q ss_pred EEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEc-CCCc-EEEEc
Q 035275 4 ISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWT-PGSL-MFVTG 48 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~-~~~~-~~~s~ 48 (69)
++...++.|..||. +++.+..+..+...+.+++|. |++. ++++.
T Consensus 245 va~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 245 NARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 34444578999998 566566666666668899998 7754 44443
No 229
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=89.47 E-value=1.4 Score=23.17 Aligned_cols=54 Identities=6% Similarity=0.006 Sum_probs=32.3
Q ss_pred EEEeCCCcEEEEECCCCceEE-EEeCCCCCCeEEEEcCCCcEEEEcCC--cEEEEcCC
Q 035275 4 ISGSGDGSVYAWSVRSGKEVA-SWMSFDTEPPVIKWTPGSLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~~~~~-~~~~~~~~v~~v~~~~~~~~~~s~~~--~~~~~~~~ 58 (69)
++...++.|.++|.. ++... .+......+..+.+.+++.++++... .+..+..+
T Consensus 35 v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 35 FTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 344456788888877 54322 12233356678889998887777543 35444433
No 230
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=88.51 E-value=1.7 Score=22.86 Aligned_cols=53 Identities=15% Similarity=0.134 Sum_probs=31.6
Q ss_pred EEEeCCCcEEEEECCCCceEEEE--eCCCCCCeEEEEcCCCcEEEEcC--CcEEEEcCC
Q 035275 4 ISGSGDGSVYAWSVRSGKEVASW--MSFDTEPPVIKWTPGSLMFVTGS--SELSFWIPD 58 (69)
Q Consensus 4 ~s~~~d~~v~~wd~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~s~~--~~~~~~~~~ 58 (69)
++...++.|..+|.. +.. ..+ ......+..+.+.+++.++++.. ..+..+..+
T Consensus 77 v~~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 77 FTENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp EEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred EEecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC
Confidence 333445678888876 543 333 22335567888999888777753 234444433
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=88.30 E-value=2.8 Score=25.11 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=28.5
Q ss_pred CcEEEEECCCCceEEEEeCC--C-CCCeEEEEcCCCcEEEEcC
Q 035275 10 GSVYAWSVRSGKEVASWMSF--D-TEPPVIKWTPGSLMFVTGS 49 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~--~-~~v~~v~~~~~~~~~~s~~ 49 (69)
|.+.+.|..+.+....+... . .--..+.|+|++..+++++
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~ 206 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSE 206 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECB
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEcc
Confidence 67999999988888777522 2 1123577899988877773
No 232
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=87.80 E-value=2.2 Score=23.50 Aligned_cols=60 Identities=13% Similarity=-0.079 Sum_probs=34.4
Q ss_pred EEEEeCCC--cEEEEECCCCceEEEEeCCCCCC-eEEEEcCCCcEEEEcCCcEEEEcCCCCCcC
Q 035275 3 VISGSGDG--SVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVTGSSELSFWIPDLSKLG 63 (69)
Q Consensus 3 ~~s~~~d~--~v~~wd~~~~~~~~~~~~~~~~v-~~v~~~~~~~~~~s~~~~~~~~~~~~~~~~ 63 (69)
+.+++.+| .|...|+.+++.+..+....... ..+....+ .++.+.-.+-.++.+|..+++
T Consensus 56 yestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~-~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 56 YESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKD-KIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETT-EEEEEESSSSEEEEEETTTCC
T ss_pred EEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCC-EEEEEEeeCCEEEEEECccCc
Confidence 45566655 89999999998777765443321 23444433 344444344455555555444
No 233
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=86.33 E-value=1 Score=26.37 Aligned_cols=46 Identities=11% Similarity=0.068 Sum_probs=30.8
Q ss_pred CcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCc-EEEEc---CCcEEEEc
Q 035275 10 GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTG---SSELSFWI 56 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~---~~~~~~~~ 56 (69)
+.|.+.|..+.+.+..+..-. ....+.|+|++. .+.++ +.++.++.
T Consensus 350 ~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 350 RFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEE
Confidence 469999999988777664222 246889999987 55554 33455544
No 234
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=86.31 E-value=3.9 Score=24.68 Aligned_cols=45 Identities=16% Similarity=0.191 Sum_probs=29.8
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCC-CeEEEEcCCCcEEE
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTE-PPVIKWTPGSLMFV 46 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~-v~~v~~~~~~~~~~ 46 (69)
.++.++.|+.|..+|..+++.+..+...... -.-+.+..++..++
T Consensus 477 ~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 477 LVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred EEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 4667889999999999999988877533221 12233545665444
No 235
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=84.71 E-value=5 Score=24.55 Aligned_cols=43 Identities=16% Similarity=0.118 Sum_probs=29.0
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCC-eEEEEcCCCcE
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLM 44 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v-~~v~~~~~~~~ 44 (69)
.++.++.|+.++.+|.++++.+.......+.. .-+.|..++..
T Consensus 486 ~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 486 LVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred EEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 46678899999999999999888775332211 22445455543
No 236
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=84.54 E-value=3.6 Score=22.76 Aligned_cols=28 Identities=25% Similarity=0.209 Sum_probs=21.7
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSF 29 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~ 29 (69)
.++.++.++.|..+|..+++........
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 4667778899999999999877666433
No 237
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=84.47 E-value=2.3 Score=26.95 Aligned_cols=26 Identities=12% Similarity=0.275 Sum_probs=21.1
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEE
Q 035275 1 MFVISGSGDGSVYAWSVRSGKEVASW 26 (69)
Q Consensus 1 ~~~~s~~~d~~v~~wd~~~~~~~~~~ 26 (69)
.++++-+.|.++++|++.++..+...
T Consensus 232 ~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 232 RYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp TEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred cEEEEEEcCCeEEEEEcCCCceEEee
Confidence 36888999999999999998755443
No 238
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=83.15 E-value=2.4 Score=27.74 Aligned_cols=24 Identities=13% Similarity=0.062 Sum_probs=20.0
Q ss_pred EEEEEeCCCcEEEEECCCCceEEE
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVAS 25 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~ 25 (69)
++++-+.|+++++|++.++..+..
T Consensus 251 ~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 251 VLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp EEEEEBTTCEEEEEETTTTEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCCeEEe
Confidence 678899999999999998865443
No 239
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=82.78 E-value=5.9 Score=24.24 Aligned_cols=36 Identities=11% Similarity=0.043 Sum_probs=22.8
Q ss_pred cEEEEECCCCce--EEEEe--C-CCCCCeEEEEcCCCcEEE
Q 035275 11 SVYAWSVRSGKE--VASWM--S-FDTEPPVIKWTPGSLMFV 46 (69)
Q Consensus 11 ~v~~wd~~~~~~--~~~~~--~-~~~~v~~v~~~~~~~~~~ 46 (69)
.|.+|++.++.. ..... . |......+.++|++..++
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 488999877542 22222 2 344456888999987654
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=82.62 E-value=1.8 Score=26.69 Aligned_cols=49 Identities=10% Similarity=0.022 Sum_probs=27.4
Q ss_pred CCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCC
Q 035275 9 DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPD 58 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~ 58 (69)
+|.|..||+.+++.......+... ..-.+...+.++..++.+..++.+|
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~-~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIF-NGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSC-CCCEEEETTTEEEEECTTSEEEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCc-cCccceECCCEEEEECCCCcEEEEE
Confidence 478999999999988777544322 2123333444444444443343333
No 241
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.76 E-value=3.2 Score=26.80 Aligned_cols=23 Identities=13% Similarity=0.043 Sum_probs=19.6
Q ss_pred EEEEEeCCCcEEEEECCCCceEE
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVA 24 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~ 24 (69)
++++-+.|+++++|++.++..+.
T Consensus 249 ~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 249 VLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp EEEEEETTCEEEEEETTTTEEEE
T ss_pred EEEEEECCCEEEEEECCCCCeEe
Confidence 67889999999999999886544
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=80.61 E-value=4.9 Score=21.51 Aligned_cols=54 Identities=17% Similarity=0.119 Sum_probs=32.6
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcC-CcEEEEc
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGS-SELSFWI 56 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~-~~~~~~~ 56 (69)
.+..++.++.|..+|.. +........+...+..+...+++.+++... ..+..+.
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d 163 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAIN 163 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEEC
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEEC
Confidence 35667777888888887 666655554444455555666666655442 3344443
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=80.54 E-value=4.9 Score=21.49 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=27.2
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc-CCcEEEE
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG-SSELSFW 55 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~-~~~~~~~ 55 (69)
+..++.+|.|..+|. +++...........+.++...+++.+++.+ +..+.+.
T Consensus 268 l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 268 IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYAL 320 (330)
T ss_dssp EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEE
T ss_pred EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEE
Confidence 455666666777775 455444444333444455555566555544 3334443
No 244
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=80.51 E-value=5.4 Score=21.98 Aligned_cols=40 Identities=5% Similarity=0.021 Sum_probs=26.3
Q ss_pred CCcEEEEECCCCceEEEEeCC------CCCCeEEEEcCC-CcEEEEc
Q 035275 9 DGSVYAWSVRSGKEVASWMSF------DTEPPVIKWTPG-SLMFVTG 48 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~~~~------~~~v~~v~~~~~-~~~~~s~ 48 (69)
+.+|.+||+.+++....+..+ ......+.+.|+ +..+++.
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd 138 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISD 138 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEc
Confidence 468999999888755555321 234578899875 5555663
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=80.25 E-value=5.3 Score=21.73 Aligned_cols=60 Identities=15% Similarity=-0.023 Sum_probs=34.4
Q ss_pred EEEEeCCC--cEEEEECCCCceEEEEeCCCCCC-eEEEEcCCCcEEEEcCCcEEEEcCCCCCcC
Q 035275 3 VISGSGDG--SVYAWSVRSGKEVASWMSFDTEP-PVIKWTPGSLMFVTGSSELSFWIPDLSKLG 63 (69)
Q Consensus 3 ~~s~~~d~--~v~~wd~~~~~~~~~~~~~~~~v-~~v~~~~~~~~~~s~~~~~~~~~~~~~~~~ 63 (69)
+.|++.+| .|...|+.+++.+.......... ..+.+.. ..++...-.+-.++.+|..+++
T Consensus 34 yestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 34 YESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp EEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTE
T ss_pred EEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCc
Confidence 45555544 79999999998777665443322 2344443 3344444445555556655544
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=80.15 E-value=8.1 Score=23.77 Aligned_cols=28 Identities=21% Similarity=0.430 Sum_probs=23.4
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeCC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMSF 29 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~~ 29 (69)
.++.++.|+.+..||..+++.+..+...
T Consensus 471 ~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 471 LVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred EEEEECCcccchhhhhhcChhheEecCC
Confidence 5778889999999999999988777543
No 247
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=78.28 E-value=6.1 Score=21.27 Aligned_cols=50 Identities=14% Similarity=0.193 Sum_probs=27.4
Q ss_pred CcEEEEECCCCceEE---EE-eCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCC
Q 035275 10 GSVYAWSVRSGKEVA---SW-MSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~---~~-~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~ 60 (69)
+.|.+|++..+. +. .+ ....+....+.+.+++.+.++....+.+|.++..
T Consensus 215 ~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~~g~ 268 (305)
T 3dr2_A 215 VEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFDSDGQ 268 (305)
T ss_dssp CEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEECTTSC
T ss_pred CEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEECCCCC
Confidence 567777775443 21 11 1122334567788888877665444555555433
No 248
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=76.44 E-value=8.9 Score=22.21 Aligned_cols=49 Identities=8% Similarity=0.143 Sum_probs=26.1
Q ss_pred CCCcEEEEECCCCceEEEEe-CCCCCCeEEEEcCCCc-EEEEcCCcEEEEc
Q 035275 8 GDGSVYAWSVRSGKEVASWM-SFDTEPPVIKWTPGSL-MFVTGSSELSFWI 56 (69)
Q Consensus 8 ~d~~v~~wd~~~~~~~~~~~-~~~~~v~~v~~~~~~~-~~~s~~~~~~~~~ 56 (69)
.++.|..++...+....... ........++++|++. ++++.....+++.
T Consensus 246 ~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 246 NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 44567777776544211111 1113347899999988 5555433333333
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=76.40 E-value=7.3 Score=21.22 Aligned_cols=54 Identities=4% Similarity=0.129 Sum_probs=33.1
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeCCC---------CCCeEEEEcCCCcEEEEcCCcEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMSFD---------TEPPVIKWTPGSLMFVTGSSELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~~~---------~~v~~v~~~~~~~~~~s~~~~~~~~~~~ 58 (69)
++....+..+..+|.. ++....+.-.. .+-..|+|.+++.+++++..+ .+|.+.
T Consensus 188 liLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n-~~y~f~ 250 (255)
T 3qqz_A 188 LVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN-RFYRFT 250 (255)
T ss_dssp EEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT-EEEEEE
T ss_pred EEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc-eEEEEE
Confidence 3444455677788864 54443332111 244799999999998887555 666553
No 250
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=75.66 E-value=8.1 Score=22.36 Aligned_cols=58 Identities=9% Similarity=0.224 Sum_probs=36.7
Q ss_pred EEEEEeCCCcEEEEECC---CC----ceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCC
Q 035275 2 FVISGSGDGSVYAWSVR---SG----KEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~---~~----~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~ 60 (69)
+++....+|.+..|++. .+ +.+..+.. .+.+..+...+....+..+.++..||.++.+
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 46666777888888883 22 22333332 3456777778766666666666779987743
No 251
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=74.87 E-value=10 Score=22.81 Aligned_cols=45 Identities=9% Similarity=0.293 Sum_probs=26.7
Q ss_pred EEEEeCCCcEEEEECCCC----ceEEEEe------CCC-CCCeEEEEcCCCcEEEEc
Q 035275 3 VISGSGDGSVYAWSVRSG----KEVASWM------SFD-TEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~----~~~~~~~------~~~-~~v~~v~~~~~~~~~~s~ 48 (69)
++++-.+++|.+.|..+. +..+.+. ... ..-..+...|++ +++++
T Consensus 99 ~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~ 154 (462)
T 2ece_A 99 IVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISA 154 (462)
T ss_dssp EEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEE
T ss_pred EEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEc
Confidence 566667779999998654 3334442 001 122456778998 66654
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=73.52 E-value=8.9 Score=20.81 Aligned_cols=38 Identities=11% Similarity=0.082 Sum_probs=19.2
Q ss_pred CcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCc-EEEEc
Q 035275 10 GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSL-MFVTG 48 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~s~ 48 (69)
+.|..+|..++........ ......++++|++. ++++.
T Consensus 165 g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d 203 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAE 203 (322)
T ss_dssp EEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEE
T ss_pred ceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEe
Confidence 4466666554432211111 12235788999976 44543
No 253
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=72.72 E-value=12 Score=22.62 Aligned_cols=25 Identities=12% Similarity=-0.088 Sum_probs=16.6
Q ss_pred CCeEEEEcCCCc-EEEEcCCcEEEEc
Q 035275 32 EPPVIKWTPGSL-MFVTGSSELSFWI 56 (69)
Q Consensus 32 ~v~~v~~~~~~~-~~~s~~~~~~~~~ 56 (69)
.-..++|+|++. ++++-....+|+.
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 347899999998 4555444445554
No 254
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=72.19 E-value=4.6 Score=24.87 Aligned_cols=18 Identities=28% Similarity=0.351 Sum_probs=15.2
Q ss_pred CcEEEEECCCCceEEEEe
Q 035275 10 GSVYAWSVRSGKEVASWM 27 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~ 27 (69)
|.|..||+.+++..+...
T Consensus 457 g~l~A~D~~tG~~~W~~~ 474 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE 474 (677)
T ss_dssp EEEEEEETTTTEEEEEEE
T ss_pred cEEEEEeCCCCcEEeecC
Confidence 679999999999877764
No 255
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=67.79 E-value=13 Score=20.40 Aligned_cols=45 Identities=7% Similarity=0.067 Sum_probs=27.9
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeC--CC---CCCeEEEEcCCCcEEEEc
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMS--FD---TEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~--~~---~~v~~v~~~~~~~~~~s~ 48 (69)
++.+..+++|.+.|..+.+....+.. .. ...+.+.|. ++..++..
T Consensus 119 l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~ 168 (266)
T 2iwa_A 119 LYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANI 168 (266)
T ss_dssp EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred EEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEec
Confidence 33444577899999988776666532 11 124566677 56666665
No 256
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=64.53 E-value=14 Score=19.42 Aligned_cols=51 Identities=18% Similarity=0.059 Sum_probs=26.0
Q ss_pred CCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCC-CcEEEEcCC--cEEEEcCC
Q 035275 8 GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPG-SLMFVTGSS--ELSFWIPD 58 (69)
Q Consensus 8 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~s~~~--~~~~~~~~ 58 (69)
.++.|..++.+.+...............+++.|+ +.++++... .+.....+
T Consensus 56 ~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~ 109 (267)
T 1npe_A 56 SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD 109 (267)
T ss_dssp TTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcC
Confidence 3456777776544322222222234578888885 455555422 34444443
No 257
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=63.83 E-value=19 Score=20.92 Aligned_cols=49 Identities=10% Similarity=0.171 Sum_probs=26.7
Q ss_pred CCCcEEEEECCCCceEEEE-e-CCCCCCeEEEEcCCCc-EEEEcCCcEEEEc
Q 035275 8 GDGSVYAWSVRSGKEVASW-M-SFDTEPPVIKWTPGSL-MFVTGSSELSFWI 56 (69)
Q Consensus 8 ~d~~v~~wd~~~~~~~~~~-~-~~~~~v~~v~~~~~~~-~~~s~~~~~~~~~ 56 (69)
.++.|..++..++.....+ . +....-..++++|++. ++++.....+|+.
T Consensus 248 ~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~ 299 (433)
T 4hw6_A 248 HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYR 299 (433)
T ss_dssp TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEE
Confidence 3456777777656542332 1 1122234699999987 5555444444444
No 258
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=63.52 E-value=16 Score=22.66 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=33.7
Q ss_pred EEEEeCCCcEEEEECCCCc------------eEEEEeCCCCCCeEEEEcCCCcEEEEc--CCcEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRSGK------------EVASWMSFDTEPPVIKWTPGSLMFVTG--SSELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~------------~~~~~~~~~~~v~~v~~~~~~~~~~s~--~~~~~~~~~~ 58 (69)
++++..+.+|.++|..+.+ ...... -......++|+|++..+++. +.++..|.++
T Consensus 292 ~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 292 CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred EEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 3444455689999987542 122222 22334688999999555554 6678887654
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=59.62 E-value=19 Score=19.44 Aligned_cols=40 Identities=10% Similarity=0.131 Sum_probs=23.4
Q ss_pred eCCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc
Q 035275 7 SGDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 7 ~~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~ 48 (69)
..++.|..+|.... ....+. ..+....+.+.+++.++++.
T Consensus 50 ~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad 89 (306)
T 2p4o_A 50 HEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATG 89 (306)
T ss_dssp TTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEE
T ss_pred CCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEe
Confidence 34566777776432 222222 22346788899988876664
No 260
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=59.07 E-value=23 Score=20.23 Aligned_cols=27 Identities=22% Similarity=0.268 Sum_probs=23.1
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEeC
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWMS 28 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~~ 28 (69)
.++.++.||.|.-.|..+|+..+.+..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~ 38 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEP 38 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECG
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 578889999999999999998888743
No 261
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=58.32 E-value=29 Score=21.28 Aligned_cols=37 Identities=5% Similarity=-0.071 Sum_probs=23.3
Q ss_pred CcEEEEECCCCce--EEEEeCCCCCCeEEEEcCCCcEEEEc
Q 035275 10 GSVYAWSVRSGKE--VASWMSFDTEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 10 ~~v~~wd~~~~~~--~~~~~~~~~~v~~v~~~~~~~~~~s~ 48 (69)
+.|..+++.++.. ...+..|...+. .|++++..++..
T Consensus 305 ~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 305 RRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp CEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEE
T ss_pred CEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEE
Confidence 5788889876543 244555655554 788877655543
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=58.16 E-value=20 Score=21.76 Aligned_cols=26 Identities=15% Similarity=0.192 Sum_probs=21.4
Q ss_pred EEEEEeCCCcEEEEECCCCceEEEEe
Q 035275 2 FVISGSGDGSVYAWSVRSGKEVASWM 27 (69)
Q Consensus 2 ~~~s~~~d~~v~~wd~~~~~~~~~~~ 27 (69)
.++.++.+|.+.++|..+++.+....
T Consensus 338 ~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 338 ATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCceEEEEECCCCCEecccc
Confidence 46778899999999999998876653
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=39.34 E-value=69 Score=19.99 Aligned_cols=55 Identities=18% Similarity=0.209 Sum_probs=33.6
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEeC-----CCCCCeEEEEcCCCcEEEEcCCcEEEEcCC
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWMS-----FDTEPPVIKWTPGSLMFVTGSSELSFWIPD 58 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~~-----~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~ 58 (69)
+..|..++.|..+|..++. ...+.. ....|.++...+++.+.+....-+..+.++
T Consensus 420 lWigt~~~Gl~~~d~~~~~-~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~ 479 (795)
T 4a2l_A 420 VYIGTHAGGLSILHRNSGQ-VENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPE 479 (795)
T ss_dssp EEEEETTTEEEEEETTTCC-EEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETT
T ss_pred EEEEeCcCceeEEeCCCCc-EEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCC
Confidence 5667776778999987765 333321 234577777777777665544445554443
No 264
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=38.35 E-value=59 Score=18.91 Aligned_cols=38 Identities=11% Similarity=-0.071 Sum_probs=24.6
Q ss_pred CcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEc
Q 035275 10 GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTG 48 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~ 48 (69)
+.|..+|..++. +..+.........+++.+++.++++.
T Consensus 162 ~~I~~id~~~g~-v~~~~~~~~~P~giavd~dG~lyVad 199 (433)
T 4hw6_A 162 DAFRHVDFVNQY-VDIKTTNIGQCADVNFTLNGDMVVVD 199 (433)
T ss_dssp SCEEEEETTTTE-EEEECCCCSCEEEEEECTTCCEEEEE
T ss_pred CCEEEEECCCCE-EEEeecCCCCccEEEECCCCCEEEEc
Confidence 567777776554 33443333446789999998876664
No 265
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=38.33 E-value=33 Score=21.66 Aligned_cols=25 Identities=28% Similarity=0.260 Sum_probs=21.0
Q ss_pred EEEEeCCCcEEEEECCCCceEEEEe
Q 035275 3 VISGSGDGSVYAWSVRSGKEVASWM 27 (69)
Q Consensus 3 ~~s~~~d~~v~~wd~~~~~~~~~~~ 27 (69)
|.||+..|.|.++.+.+.+.+..+.
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~Ip 97 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIP 97 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEEC
T ss_pred EeecCcCceEEEEecCCcceEEEee
Confidence 7899999999999999888776653
No 266
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=35.60 E-value=64 Score=18.55 Aligned_cols=28 Identities=18% Similarity=0.097 Sum_probs=20.4
Q ss_pred CeEEEEcCCCcEEEEcCCcEEEEcCCCC
Q 035275 33 PPVIKWTPGSLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 33 v~~v~~~~~~~~~~s~~~~~~~~~~~~~ 60 (69)
...+.+.|++..++..+....++.+|+.
T Consensus 187 ~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 187 YSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp CSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred cceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 4689999999877776546666666655
No 267
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=35.27 E-value=22 Score=20.40 Aligned_cols=27 Identities=7% Similarity=0.004 Sum_probs=16.4
Q ss_pred CeEEEEcCCCcEEEEc-CCcEEEEcCCC
Q 035275 33 PPVIKWTPGSLMFVTG-SSELSFWIPDL 59 (69)
Q Consensus 33 v~~v~~~~~~~~~~s~-~~~~~~~~~~~ 59 (69)
-+.++|+|++..+..+ .....+|.++.
T Consensus 223 pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 223 ANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred cCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 4789999998654443 33444554443
No 268
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=34.01 E-value=41 Score=15.82 Aligned_cols=26 Identities=12% Similarity=0.219 Sum_probs=17.9
Q ss_pred cEEEEECCCCceEEEE--eCCCCCCeEE
Q 035275 11 SVYAWSVRSGKEVASW--MSFDTEPPVI 36 (69)
Q Consensus 11 ~v~~wd~~~~~~~~~~--~~~~~~v~~v 36 (69)
+|.+||..+|..+.+. .+..+.+.|+
T Consensus 18 ~V~IvNvnNG~RfeTYvI~GerSG~I~l 45 (97)
T 1uhe_A 18 KVEIVDVNNGERFSTYVILGKKRGEICV 45 (97)
T ss_dssp EEEEEETTTCCEEEEECEEECSTTCEEE
T ss_pred EEEEEECCCCceEEEEEEeeccCCeEEE
Confidence 6899999999876554 4444555555
No 269
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=32.70 E-value=1.2e+02 Score=20.61 Aligned_cols=50 Identities=8% Similarity=0.082 Sum_probs=32.5
Q ss_pred CCcEEEEECCCCceEEEE--eCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCCCC
Q 035275 9 DGSVYAWSVRSGKEVASW--MSFDTEPPVIKWTPGSLMFVTGSSELSFWIPDLS 60 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~~~ 60 (69)
.|.|.++++..++ +..+ ...++.+.++.-. ++.++++.+..+++|.|...
T Consensus 863 ~Gri~vf~v~~~k-L~lv~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~~ 914 (1158)
T 3ei3_A 863 QGRIVVFQYSDGK-LQTVAEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTTE 914 (1158)
T ss_dssp CEEEEEEEEETTE-EEEEEEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECTT
T ss_pred ceEEEEEEEECCE-EEEEEEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCCC
Confidence 4789999986443 3322 3346777777633 45666666888999887654
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=29.02 E-value=80 Score=17.61 Aligned_cols=48 Identities=8% Similarity=0.020 Sum_probs=23.0
Q ss_pred CcEEEEECCCCceEEEEeCCCCCCeEEEEcCC-CcEEEEcCCc-EEEEcC
Q 035275 10 GSVYAWSVRSGKEVASWMSFDTEPPVIKWTPG-SLMFVTGSSE-LSFWIP 57 (69)
Q Consensus 10 ~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~s~~~~-~~~~~~ 57 (69)
+.|.+.+.+...........-.....+++.|. +.++.+.... ..|+..
T Consensus 138 ~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 138 SRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp TEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEE
Confidence 45555555433222222222234467888874 5556654333 444443
No 271
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=28.74 E-value=76 Score=17.26 Aligned_cols=50 Identities=16% Similarity=0.131 Sum_probs=25.3
Q ss_pred CCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCCCcEEEEcCCcEEEEcCC
Q 035275 8 GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPGSLMFVTGSSELSFWIPD 58 (69)
Q Consensus 8 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~s~~~~~~~~~~~ 58 (69)
.||.|..|-......+..-......|..++......++++ +.++..|=.+
T Consensus 196 ~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~wG~n 245 (282)
T 3qhy_B 196 KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIAWGSS 245 (282)
T ss_dssp ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEEESTT
T ss_pred ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEEecCC
Confidence 3677777766432211110111234556666555556666 6667666543
No 272
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=28.73 E-value=82 Score=17.65 Aligned_cols=48 Identities=17% Similarity=0.136 Sum_probs=27.4
Q ss_pred CCcEEEEECCCCceEEE--E-eCCCCCCeEEEEcCCCcEEEEcC-CcEEEEc
Q 035275 9 DGSVYAWSVRSGKEVAS--W-MSFDTEPPVIKWTPGSLMFVTGS-SELSFWI 56 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~--~-~~~~~~v~~v~~~~~~~~~~s~~-~~~~~~~ 56 (69)
.+.|...+++.+..... + .....++..+.+.|++.++++.+ .+-.||.
T Consensus 298 ~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~r 349 (353)
T 2g8s_A 298 DKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLK 349 (353)
T ss_dssp TTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEE
T ss_pred CCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEE
Confidence 34555555544332211 2 12235678899999998887654 4566654
No 273
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=27.64 E-value=1e+02 Score=19.33 Aligned_cols=50 Identities=16% Similarity=0.116 Sum_probs=22.8
Q ss_pred CCcEEEEECCCCceEEEEeCCCCCCeEEEEcCC-CcEEEEcCC-cEEEEcCC
Q 035275 9 DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPG-SLMFVTGSS-ELSFWIPD 58 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~s~~~-~~~~~~~~ 58 (69)
.+.|.+.+.+.......+.........+++.|. +.++.+... ...|+..+
T Consensus 474 ~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~ 525 (699)
T 1n7d_A 474 LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 525 (699)
T ss_dssp TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCC
T ss_pred CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEe
Confidence 345666666433322222222233456777774 444544322 24455444
No 274
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=21.42 E-value=1.1e+02 Score=16.65 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=19.6
Q ss_pred CCcEEEEECCCCceEEEEeCCCCCCeEEEEcCC-CcEEEEc
Q 035275 9 DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPG-SLMFVTG 48 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~s~ 48 (69)
.+.|.+.+.+...........-.....+++.|. +.++.+.
T Consensus 98 ~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 98 LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEc
Confidence 345666665433222222222234567888874 4555554
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=21.12 E-value=1.8e+02 Score=18.82 Aligned_cols=41 Identities=20% Similarity=0.196 Sum_probs=20.3
Q ss_pred CCCcEEEEECCCCceEEEEeCCCCCCeEEEEcCC-CcEEEEc
Q 035275 8 GDGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPG-SLMFVTG 48 (69)
Q Consensus 8 ~d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~s~ 48 (69)
..+.|.+.+++.......+.........+++.|. +.++.+-
T Consensus 491 ~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 491 VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 532 (791)
T ss_dssp TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEec
Confidence 3345666665433222222223334568888875 5555554
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=20.86 E-value=1.3e+02 Score=17.08 Aligned_cols=40 Identities=5% Similarity=-0.134 Sum_probs=17.0
Q ss_pred CCcEEEEECCCCceEEEEeCCCCCCeEEEEcCC-CcEEEEc
Q 035275 9 DGSVYAWSVRSGKEVASWMSFDTEPPVIKWTPG-SLMFVTG 48 (69)
Q Consensus 9 d~~v~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~s~ 48 (69)
.+.|..++.+.+...............+++.+. +.++.+.
T Consensus 137 ~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d 177 (386)
T 3v65_B 137 LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD 177 (386)
T ss_dssp TTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEE
T ss_pred CCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEc
Confidence 345555555433322222211122346667653 4444443
Done!