Query 035276
Match_columns 69
No_of_seqs 124 out of 1229
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 17:28:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035276.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035276hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 99.5 1.1E-13 3.6E-18 82.6 7.5 57 13-69 264-321 (365)
2 2ymu_A WD-40 repeat protein; u 99.5 2.2E-13 7.4E-18 83.8 7.0 57 12-69 10-66 (577)
3 4gqb_B Methylosome protein 50; 99.4 5.4E-13 1.9E-17 79.3 8.1 56 14-69 123-178 (344)
4 3vu4_A KMHSV2; beta-propeller 99.4 1.7E-12 5.9E-17 76.9 8.4 59 11-69 188-249 (355)
5 2pm7_B Protein transport prote 99.4 2.3E-12 8E-17 74.6 8.8 57 13-69 4-62 (297)
6 4aow_A Guanine nucleotide-bind 99.4 1.7E-12 5.8E-17 75.0 7.9 57 13-69 33-95 (340)
7 3frx_A Guanine nucleotide-bind 99.4 1.4E-12 4.8E-17 76.2 7.2 59 11-69 58-116 (319)
8 2xzm_R RACK1; ribosome, transl 99.4 3.7E-12 1.3E-16 74.9 8.0 58 12-69 70-127 (343)
9 3ow8_A WD repeat-containing pr 99.4 3.6E-12 1.2E-16 74.8 7.8 57 13-69 243-299 (321)
10 1vyh_C Platelet-activating fac 99.4 5.5E-12 1.9E-16 76.0 8.8 56 14-69 104-159 (410)
11 3bg1_A Protein SEC13 homolog; 99.4 1.3E-12 4.5E-17 76.3 5.6 59 11-69 6-66 (316)
12 3iz6_a 40S ribosomal protein R 99.3 1.1E-12 3.9E-17 78.1 5.1 58 12-69 60-117 (380)
13 2ynn_A Coatomer subunit beta'; 99.3 1.7E-12 5.9E-17 75.3 5.7 58 12-69 7-64 (304)
14 1got_B GT-beta; complex (GTP-b 99.3 8.4E-12 2.9E-16 73.4 8.2 58 12-69 49-106 (340)
15 4g56_B MGC81050 protein; prote 99.3 8.2E-12 2.8E-16 74.2 8.0 55 15-69 136-190 (357)
16 3zwl_B Eukaryotic translation 99.3 1.3E-11 4.3E-16 71.7 8.1 57 13-69 27-83 (369)
17 4ery_A WD repeat-containing pr 99.3 1.7E-11 5.7E-16 70.8 8.5 57 13-69 18-74 (312)
18 3ow8_A WD repeat-containing pr 99.3 1E-11 3.4E-16 72.9 7.6 58 12-69 200-257 (321)
19 4gqb_B Methylosome protein 50; 99.3 9.9E-12 3.4E-16 73.8 7.0 56 13-69 252-308 (344)
20 4gga_A P55CDC, cell division c 99.3 1.6E-11 5.4E-16 73.8 7.7 55 14-68 143-197 (420)
21 2pbi_B Guanine nucleotide-bind 99.3 1.2E-11 4.2E-16 73.2 7.0 58 12-69 58-115 (354)
22 1got_B GT-beta; complex (GTP-b 99.3 2.6E-11 8.8E-16 71.3 8.3 57 13-69 179-235 (340)
23 2ynn_A Coatomer subunit beta'; 99.3 1.1E-11 3.6E-16 72.0 6.4 58 12-69 49-106 (304)
24 4gq1_A NUP37; propeller, trans 99.3 3.3E-12 1.1E-16 76.6 4.1 57 13-69 131-195 (393)
25 3f3f_A Nucleoporin SEH1; struc 99.3 1.9E-11 6.4E-16 70.1 7.1 57 13-69 6-66 (351)
26 1vyh_C Platelet-activating fac 99.3 1.2E-11 4.2E-16 74.4 6.6 58 12-69 144-201 (410)
27 3vl1_A 26S proteasome regulato 99.3 3.6E-11 1.2E-15 71.4 8.2 57 13-69 134-190 (420)
28 3dm0_A Maltose-binding peripla 99.3 1.6E-11 5.3E-16 77.8 6.9 58 12-69 424-481 (694)
29 2ymu_A WD-40 repeat protein; u 99.3 2.8E-11 9.4E-16 74.4 7.8 57 12-69 51-107 (577)
30 2hes_X YDR267CP; beta-propelle 99.2 3.4E-11 1.2E-15 70.6 7.4 57 13-69 102-162 (330)
31 3fm0_A Protein CIAO1; WDR39,SG 99.2 4.5E-11 1.5E-15 70.5 7.9 56 14-69 57-114 (345)
32 4ery_A WD repeat-containing pr 99.2 5.9E-11 2E-15 68.5 8.1 57 13-69 60-116 (312)
33 1nr0_A Actin interacting prote 99.2 4.9E-11 1.7E-15 74.9 8.3 57 13-69 185-248 (611)
34 3mmy_A MRNA export factor; mRN 99.2 2.4E-11 8.2E-16 70.5 6.4 51 19-69 274-324 (368)
35 4g56_B MGC81050 protein; prote 99.2 3.2E-11 1.1E-15 71.6 6.8 57 12-69 263-320 (357)
36 2aq5_A Coronin-1A; WD40 repeat 99.2 1E-10 3.4E-15 69.7 8.9 57 13-69 76-140 (402)
37 1nr0_A Actin interacting prote 99.2 7E-11 2.4E-15 74.2 8.2 57 13-69 54-112 (611)
38 2hes_X YDR267CP; beta-propelle 99.2 4.3E-11 1.5E-15 70.2 6.8 57 13-69 148-206 (330)
39 2pm7_B Protein transport prote 99.2 8.9E-11 3E-15 67.9 7.9 58 12-69 47-108 (297)
40 3jrp_A Fusion protein of prote 99.2 1.9E-11 6.5E-16 71.3 5.1 57 13-69 6-64 (379)
41 3lrv_A PRE-mRNA-splicing facto 99.2 1.2E-10 4.2E-15 68.3 8.2 54 16-69 168-223 (343)
42 1erj_A Transcriptional repress 99.2 1.1E-10 3.9E-15 69.7 8.0 52 18-69 123-174 (393)
43 4ggc_A P55CDC, cell division c 99.2 1.5E-10 5E-15 66.3 7.8 55 14-68 63-117 (318)
44 3fm0_A Protein CIAO1; WDR39,SG 99.2 1.2E-10 4E-15 68.7 7.3 58 12-69 99-159 (345)
45 3dwl_C Actin-related protein 2 99.2 9.4E-11 3.2E-15 68.9 6.7 59 11-69 48-109 (377)
46 3mmy_A MRNA export factor; mRN 99.2 2E-10 6.8E-15 66.6 7.6 59 11-69 32-95 (368)
47 1erj_A Transcriptional repress 99.2 1.8E-10 6.1E-15 68.9 7.5 56 14-69 306-361 (393)
48 3sfz_A APAF-1, apoptotic pepti 99.2 2.2E-10 7.4E-15 75.8 8.5 56 14-69 611-666 (1249)
49 2pbi_B Guanine nucleotide-bind 99.2 2.8E-10 9.6E-15 67.4 8.2 56 14-69 150-205 (354)
50 3bg1_A Protein SEC13 homolog; 99.1 1.8E-10 6.2E-15 67.2 6.5 57 13-69 52-112 (316)
51 3dwl_C Actin-related protein 2 99.1 8.7E-11 3E-15 69.0 4.9 54 16-69 203-260 (377)
52 3mkq_A Coatomer beta'-subunit; 99.1 1.3E-10 4.4E-15 73.8 5.8 58 12-69 7-64 (814)
53 4e54_B DNA damage-binding prot 99.1 2.7E-10 9.4E-15 68.8 7.0 54 16-69 117-173 (435)
54 2aq5_A Coronin-1A; WD40 repeat 99.1 3.8E-10 1.3E-14 67.2 7.3 58 12-69 125-185 (402)
55 3ei3_B DNA damage-binding prot 99.1 5.9E-10 2E-14 65.8 7.9 57 13-69 68-127 (383)
56 3sfz_A APAF-1, apoptotic pepti 99.1 4.6E-10 1.6E-14 74.3 8.0 58 12-69 651-708 (1249)
57 3iz6_a 40S ribosomal protein R 99.1 2.4E-10 8.4E-15 68.0 6.2 58 12-69 243-307 (380)
58 3odt_A Protein DOA1; ubiquitin 99.1 1.8E-10 6.1E-15 65.7 5.4 58 11-69 11-68 (313)
59 1pgu_A Actin interacting prote 99.1 5.4E-10 1.9E-14 68.7 7.8 58 12-69 482-540 (615)
60 2pm9_A Protein WEB1, protein t 99.1 2.8E-10 9.5E-15 67.3 6.3 57 13-69 256-314 (416)
61 3v7d_B Cell division control p 99.1 4.9E-10 1.7E-14 67.5 7.5 57 13-69 305-361 (464)
62 3k26_A Polycomb protein EED; W 99.1 7.5E-10 2.6E-14 64.2 8.0 57 13-69 110-170 (366)
63 4a11_B DNA excision repair pro 99.1 8E-10 2.7E-14 64.9 8.2 57 13-69 38-108 (408)
64 3frx_A Guanine nucleotide-bind 99.1 6.8E-10 2.3E-14 64.8 7.8 57 12-69 101-157 (319)
65 2j04_A TAU60, YPL007P, hypothe 99.1 4.6E-10 1.6E-14 71.5 7.4 50 20-69 131-191 (588)
66 2xzm_R RACK1; ribosome, transl 99.1 3.8E-10 1.3E-14 66.3 6.6 59 11-69 14-85 (343)
67 1k8k_C P40, ARP2/3 complex 41 99.1 5.2E-10 1.8E-14 65.2 6.9 59 11-69 195-253 (372)
68 1pgu_A Actin interacting prote 99.1 9E-10 3.1E-14 67.8 8.2 56 14-69 526-593 (615)
69 3f3f_A Nucleoporin SEH1; struc 99.1 5.5E-10 1.9E-14 63.9 6.8 57 13-69 52-119 (351)
70 3zwl_B Eukaryotic translation 99.1 1.1E-09 3.9E-14 63.4 8.1 57 12-69 68-124 (369)
71 2oaj_A Protein SNI1; WD40 repe 99.1 3.1E-10 1.1E-14 74.5 6.3 54 16-69 486-584 (902)
72 2oit_A Nucleoporin 214KDA; NH2 99.1 4.6E-10 1.6E-14 68.6 6.6 58 12-69 143-201 (434)
73 4aez_A CDC20, WD repeat-contai 99.1 9.8E-10 3.4E-14 65.6 7.8 57 13-69 212-268 (401)
74 3v7d_B Cell division control p 99.1 7.4E-10 2.5E-14 66.8 7.2 57 12-69 156-212 (464)
75 1k8k_C P40, ARP2/3 complex 41 99.1 3.2E-10 1.1E-14 66.1 5.4 54 16-69 6-61 (372)
76 2oaj_A Protein SNI1; WD40 repe 99.0 3.2E-10 1.1E-14 74.4 5.8 56 13-69 570-631 (902)
77 3dw8_B Serine/threonine-protei 99.0 5.5E-10 1.9E-14 66.7 6.3 54 16-69 26-102 (447)
78 4aez_A CDC20, WD repeat-contai 99.0 1.6E-09 5.6E-14 64.6 8.3 53 16-68 132-184 (401)
79 3mkq_A Coatomer beta'-subunit; 99.0 5.3E-10 1.8E-14 71.0 6.4 57 13-69 50-106 (814)
80 3k26_A Polycomb protein EED; W 99.0 9.2E-10 3.2E-14 63.8 6.9 54 16-69 67-124 (366)
81 1sq9_A Antiviral protein SKI8; 99.0 1.1E-09 3.7E-14 64.6 7.1 53 17-69 290-363 (397)
82 3jrp_A Fusion protein of prote 99.0 8.6E-10 2.9E-14 64.2 6.6 58 12-69 49-110 (379)
83 2vdu_B TRNA (guanine-N(7)-)-me 99.0 7.2E-10 2.5E-14 67.1 6.3 57 13-69 190-250 (450)
84 3odt_A Protein DOA1; ubiquitin 99.0 1.6E-09 5.4E-14 61.8 7.4 56 13-69 220-275 (313)
85 1sq9_A Antiviral protein SKI8; 99.0 1.9E-09 6.4E-14 63.5 7.8 57 11-69 9-71 (397)
86 4gga_A P55CDC, cell division c 99.0 3.6E-10 1.2E-14 67.9 4.7 45 12-56 358-402 (420)
87 3dw8_B Serine/threonine-protei 99.0 2.3E-09 7.8E-14 64.0 8.1 56 14-69 222-294 (447)
88 4aow_A Guanine nucleotide-bind 99.0 2E-09 6.8E-14 62.1 7.6 56 13-69 210-265 (340)
89 3i2n_A WD repeat-containing pr 99.0 5.8E-10 2E-14 64.6 5.3 69 1-69 1-74 (357)
90 1yfq_A Cell cycle arrest prote 99.0 8.2E-10 2.8E-14 63.9 5.7 56 14-69 7-65 (342)
91 1r5m_A SIR4-interacting protei 99.0 2.7E-09 9.4E-14 62.8 8.1 52 17-69 107-158 (425)
92 1yfq_A Cell cycle arrest prote 99.0 1.7E-09 5.9E-14 62.5 6.9 51 17-67 250-301 (342)
93 3jro_A Fusion protein of prote 99.0 3.1E-10 1.1E-14 72.9 4.1 57 13-69 4-62 (753)
94 1gxr_A ESG1, transducin-like e 99.0 3.7E-09 1.3E-13 60.7 8.1 57 13-69 136-192 (337)
95 2pm9_A Protein WEB1, protein t 99.0 1.8E-09 6.2E-14 63.8 7.0 55 15-69 64-122 (416)
96 4h5i_A Guanine nucleotide-exch 99.0 1.3E-09 4.5E-14 64.9 6.4 53 16-69 131-185 (365)
97 3gre_A Serine/threonine-protei 99.0 2.3E-09 7.9E-14 64.2 7.2 52 17-68 213-265 (437)
98 3gre_A Serine/threonine-protei 99.0 1.7E-09 5.9E-14 64.7 6.3 54 15-69 60-120 (437)
99 4ggc_A P55CDC, cell division c 99.0 6.9E-09 2.4E-13 59.3 8.2 54 16-69 238-293 (318)
100 2vdu_B TRNA (guanine-N(7)-)-me 98.9 4.1E-09 1.4E-13 63.8 7.4 55 15-69 99-158 (450)
101 3ei3_B DNA damage-binding prot 98.9 6.5E-09 2.2E-13 61.3 7.9 53 16-69 161-213 (383)
102 1r5m_A SIR4-interacting protei 98.9 4.4E-09 1.5E-13 61.9 7.1 57 13-69 242-298 (425)
103 1gxr_A ESG1, transducin-like e 98.9 1E-08 3.5E-13 58.8 8.4 54 16-69 95-150 (337)
104 3dm0_A Maltose-binding peripla 98.9 9.9E-09 3.4E-13 65.1 8.7 55 15-69 514-570 (694)
105 3i2n_A WD repeat-containing pr 98.9 6.5E-09 2.2E-13 60.2 6.9 53 16-68 63-119 (357)
106 2j04_B YDR362CP, TAU91; beta p 98.9 3.7E-09 1.3E-13 66.2 6.1 50 20-69 357-406 (524)
107 3jro_A Fusion protein of prote 98.9 5.4E-09 1.8E-13 67.2 6.9 58 12-69 47-108 (753)
108 3lrv_A PRE-mRNA-splicing facto 98.9 9E-09 3.1E-13 60.3 7.3 56 14-69 121-179 (343)
109 2xyi_A Probable histone-bindin 98.9 1.6E-08 5.5E-13 61.0 8.6 55 15-69 274-330 (430)
110 1p22_A F-BOX/WD-repeat protein 98.9 1E-08 3.6E-13 61.7 7.4 55 13-69 168-222 (435)
111 2xyi_A Probable histone-bindin 98.9 1.9E-08 6.5E-13 60.7 8.4 57 13-69 226-286 (430)
112 2j04_B YDR362CP, TAU91; beta p 98.8 2.4E-08 8.4E-13 62.5 8.6 55 15-69 204-275 (524)
113 2w18_A PALB2, fancn, partner a 98.8 3.2E-09 1.1E-13 64.3 4.4 53 16-68 176-234 (356)
114 4a11_B DNA excision repair pro 98.8 3E-08 1E-12 58.2 8.5 37 15-51 242-278 (408)
115 3vl1_A 26S proteasome regulato 98.8 2E-08 6.7E-13 59.6 7.6 56 13-68 176-234 (420)
116 4e54_B DNA damage-binding prot 98.8 1.9E-08 6.5E-13 60.7 6.1 52 17-69 208-259 (435)
117 2j04_A TAU60, YPL007P, hypothe 98.8 1.4E-08 4.8E-13 64.8 5.7 54 14-69 178-235 (588)
118 2ovr_B FBW7, F-BOX/WD repeat p 98.8 1.6E-08 5.4E-13 60.9 5.6 56 13-69 113-168 (445)
119 2ovr_B FBW7, F-BOX/WD repeat p 98.7 7.4E-08 2.5E-12 58.0 7.4 55 12-68 153-207 (445)
120 1p22_A F-BOX/WD-repeat protein 98.7 9E-08 3.1E-12 57.6 7.5 51 16-68 131-181 (435)
121 2oit_A Nucleoporin 214KDA; NH2 98.7 5.1E-08 1.7E-12 59.6 6.4 53 16-69 190-249 (434)
122 2w18_A PALB2, fancn, partner a 98.6 9.8E-08 3.4E-12 57.9 6.4 40 30-69 295-335 (356)
123 3bws_A Protein LP49; two-domai 98.6 8.9E-08 3E-12 57.1 5.7 55 15-69 166-220 (433)
124 2hqs_A Protein TOLB; TOLB, PAL 98.6 2.5E-07 8.7E-12 56.0 7.1 55 14-69 174-231 (415)
125 3vu4_A KMHSV2; beta-propeller 98.5 3.1E-07 1.1E-11 54.4 5.7 34 17-50 239-272 (355)
126 1l0q_A Surface layer protein; 98.5 8.9E-07 3.1E-11 52.1 7.1 50 19-69 32-82 (391)
127 1k32_A Tricorn protease; prote 98.4 1.4E-06 4.7E-11 57.7 7.3 55 15-69 375-429 (1045)
128 4gq1_A NUP37; propeller, trans 98.4 1.3E-06 4.4E-11 52.3 6.2 41 29-69 328-368 (393)
129 2hqs_A Protein TOLB; TOLB, PAL 98.3 3.6E-06 1.2E-10 50.9 7.2 49 20-69 355-406 (415)
130 2ojh_A Uncharacterized protein 98.3 1.4E-06 4.6E-11 48.9 4.9 54 15-69 38-93 (297)
131 1nir_A Nitrite reductase; hemo 98.2 9.1E-06 3.1E-10 51.0 7.0 48 21-69 181-230 (543)
132 1l0q_A Surface layer protein; 98.2 1.5E-05 5.1E-10 46.9 7.5 51 18-69 115-166 (391)
133 3bws_A Protein LP49; two-domai 98.1 1.4E-05 4.8E-10 47.6 7.2 54 15-69 208-262 (433)
134 2ojh_A Uncharacterized protein 98.1 1.5E-05 5.2E-10 44.6 6.9 57 13-69 167-225 (297)
135 3o4h_A Acylamino-acid-releasin 98.1 1.9E-06 6.5E-11 53.6 2.9 51 18-69 21-73 (582)
136 3o4h_A Acylamino-acid-releasin 98.1 2E-06 7E-11 53.5 3.0 52 13-65 189-242 (582)
137 2oiz_A Aromatic amine dehydrog 98.1 1E-05 3.6E-10 48.2 5.8 47 21-68 307-355 (361)
138 2ecf_A Dipeptidyl peptidase IV 98.1 7.6E-06 2.6E-10 51.9 5.4 41 18-58 36-82 (741)
139 1k32_A Tricorn protease; prote 98.0 1.7E-05 6E-10 52.6 5.6 53 16-69 418-480 (1045)
140 2ecf_A Dipeptidyl peptidase IV 97.9 1.8E-05 6E-10 50.3 4.5 48 21-69 111-160 (741)
141 1nir_A Nitrite reductase; hemo 97.9 2.4E-05 8.1E-10 49.2 4.8 57 13-69 415-487 (543)
142 3u4y_A Uncharacterized protein 97.8 5.2E-05 1.8E-09 43.6 5.7 52 17-69 39-92 (331)
143 1xfd_A DIP, dipeptidyl aminope 97.8 6.2E-05 2.1E-09 47.6 6.2 48 22-69 176-263 (723)
144 1pby_B Quinohemoprotein amine 97.8 5E-05 1.7E-09 43.4 5.3 40 19-58 280-319 (337)
145 1xfd_A DIP, dipeptidyl aminope 97.8 1.9E-05 6.5E-10 49.9 3.5 49 20-69 62-122 (723)
146 1ri6_A Putative isomerase YBHE 97.7 7.1E-05 2.4E-09 42.9 5.3 52 17-69 36-92 (343)
147 1pby_B Quinohemoprotein amine 97.7 0.00019 6.4E-09 41.0 6.2 49 18-69 240-288 (337)
148 3pe7_A Oligogalacturonate lyas 97.6 0.00013 4.5E-09 42.8 5.4 47 17-63 79-125 (388)
149 3vgz_A Uncharacterized protein 97.6 9.5E-05 3.2E-09 42.7 4.7 52 17-68 183-238 (353)
150 3hfq_A Uncharacterized protein 97.6 0.00019 6.4E-09 41.7 5.8 51 19-69 240-294 (347)
151 3u4y_A Uncharacterized protein 97.6 0.00048 1.7E-08 39.5 7.2 51 18-69 175-229 (331)
152 2z3z_A Dipeptidyl aminopeptida 97.6 8.7E-05 3E-09 47.0 4.3 49 21-69 183-266 (706)
153 3scy_A Hypothetical bacterial 97.5 0.00024 8.2E-09 41.5 5.5 51 19-69 306-360 (361)
154 3scy_A Hypothetical bacterial 97.5 0.00072 2.5E-08 39.5 7.1 51 18-69 258-314 (361)
155 1jmx_B Amine dehydrogenase; ox 97.5 0.00015 5.2E-09 41.7 4.2 38 20-57 296-333 (349)
156 1jmx_B Amine dehydrogenase; ox 97.5 0.0005 1.7E-08 39.5 6.3 48 19-69 255-303 (349)
157 1ri6_A Putative isomerase YBHE 97.5 0.00035 1.2E-08 40.0 5.6 30 19-48 231-261 (343)
158 2dg1_A DRP35, lactonase; beta 97.5 0.0011 3.6E-08 38.3 7.7 53 17-69 43-95 (333)
159 3pe7_A Oligogalacturonate lyas 97.5 8.8E-05 3E-09 43.5 3.1 49 12-60 24-80 (388)
160 3hfq_A Uncharacterized protein 97.5 0.00032 1.1E-08 40.7 5.4 33 17-49 84-117 (347)
161 2z3z_A Dipeptidyl aminopeptida 97.5 5.8E-05 2E-09 47.8 2.3 40 16-56 118-162 (706)
162 3azo_A Aminopeptidase; POP fam 97.4 0.00027 9.1E-09 44.5 5.0 54 16-69 185-250 (662)
163 3vgz_A Uncharacterized protein 97.4 0.00026 8.9E-09 40.8 4.4 48 21-68 143-192 (353)
164 1z68_A Fibroblast activation p 97.4 6.4E-05 2.2E-09 47.7 1.9 48 22-69 172-261 (719)
165 3azo_A Aminopeptidase; POP fam 97.4 0.0002 7E-09 45.0 4.1 53 17-69 128-196 (662)
166 1xip_A Nucleoporin NUP159; bet 97.3 0.00049 1.7E-08 42.1 5.4 51 17-69 161-222 (388)
167 1jof_A Carboxy-CIS,CIS-muconat 97.3 0.0017 5.9E-08 38.3 7.6 52 18-69 144-201 (365)
168 2xdw_A Prolyl endopeptidase; a 97.3 0.00025 8.6E-09 45.3 4.0 38 17-54 123-165 (710)
169 2bkl_A Prolyl endopeptidase; m 97.3 0.00018 6.1E-09 46.0 3.3 38 16-53 118-160 (695)
170 4a5s_A Dipeptidyl peptidase 4 97.2 0.00046 1.6E-08 44.4 4.6 47 22-69 65-120 (740)
171 4a5s_A Dipeptidyl peptidase 4 97.2 0.00022 7.4E-09 45.9 3.0 40 20-61 18-57 (740)
172 2gop_A Trilobed protease; beta 97.1 0.0013 4.6E-08 38.0 5.4 48 20-69 60-112 (347)
173 1qks_A Cytochrome CD1 nitrite 97.1 0.0039 1.3E-07 39.7 7.9 48 20-68 198-247 (567)
174 1z68_A Fibroblast activation p 97.1 0.0004 1.4E-08 44.1 3.3 46 23-69 20-68 (719)
175 3g4e_A Regucalcin; six bladed 97.0 0.0051 1.7E-07 35.4 7.1 50 19-68 199-248 (297)
176 1pjx_A Dfpase, DIISOPROPYLFLUO 97.0 0.0093 3.2E-07 33.9 7.9 50 19-68 226-275 (314)
177 3fvz_A Peptidyl-glycine alpha- 96.9 0.0098 3.3E-07 34.6 8.1 52 17-68 22-98 (329)
178 3e5z_A Putative gluconolactona 96.9 0.0035 1.2E-07 35.7 6.0 50 17-68 26-76 (296)
179 3fvz_A Peptidyl-glycine alpha- 96.9 0.0053 1.8E-07 35.8 6.4 50 19-68 196-248 (329)
180 1xip_A Nucleoporin NUP159; bet 96.8 0.0067 2.3E-07 37.1 6.9 48 17-68 87-134 (388)
181 2oiz_A Aromatic amine dehydrog 96.8 0.0018 6E-08 38.6 4.2 44 24-69 259-313 (361)
182 1jof_A Carboxy-CIS,CIS-muconat 96.7 0.00093 3.2E-08 39.4 2.6 32 20-51 255-294 (365)
183 2bkl_A Prolyl endopeptidase; m 96.7 0.0045 1.5E-07 39.6 5.8 48 22-69 171-235 (695)
184 1yr2_A Prolyl oligopeptidase; 96.6 0.001 3.4E-08 42.9 2.4 35 19-53 163-202 (741)
185 1q7f_A NHL, brain tumor CG1071 96.4 0.029 9.9E-07 31.6 7.4 49 19-68 207-258 (286)
186 2xdw_A Prolyl endopeptidase; a 96.4 0.013 4.3E-07 37.6 6.4 49 21-69 173-241 (710)
187 3iuj_A Prolyl endopeptidase; h 96.4 0.0018 6.3E-08 41.5 2.6 37 17-53 127-168 (693)
188 1q7f_A NHL, brain tumor CG1071 96.4 0.027 9.4E-07 31.7 7.2 40 16-56 27-66 (286)
189 2dg1_A DRP35, lactonase; beta 96.3 0.053 1.8E-06 31.1 8.3 52 17-68 85-142 (333)
190 3c5m_A Oligogalacturonate lyas 96.3 0.012 4.1E-07 34.3 5.5 33 24-56 86-118 (396)
191 2gop_A Trilobed protease; beta 96.3 0.014 4.8E-07 33.6 5.7 50 16-69 260-310 (347)
192 2mad_H Methylamine dehydrogena 96.3 0.021 7.1E-07 34.4 6.5 36 20-55 319-356 (373)
193 3no2_A Uncharacterized protein 96.0 0.013 4.3E-07 33.8 4.3 39 29-67 4-43 (276)
194 3e5z_A Putative gluconolactona 95.9 0.019 6.6E-07 32.6 5.0 47 18-68 217-263 (296)
195 3c5m_A Oligogalacturonate lyas 95.9 0.002 6.7E-08 37.7 0.7 31 21-51 38-71 (396)
196 3sjl_D Methylamine dehydrogena 95.7 0.03 1E-06 34.3 5.3 38 20-57 332-371 (386)
197 1mda_H Methylamine dehydrogena 95.6 0.026 9.1E-07 34.2 4.9 41 20-60 315-357 (368)
198 2ghs_A AGR_C_1268P; regucalcin 95.5 0.13 4.3E-06 30.0 7.4 49 19-68 230-278 (326)
199 1rwi_B Serine/threonine-protei 95.5 0.14 4.8E-06 28.3 7.7 50 19-68 192-241 (270)
200 3c75_H MADH, methylamine dehyd 95.4 0.037 1.3E-06 34.3 5.1 36 21-56 372-409 (426)
201 4gq2_M Nucleoporin NUP120; bet 95.4 0.045 1.5E-06 36.9 5.8 37 19-55 236-272 (950)
202 2mad_H Methylamine dehydrogena 95.1 0.085 2.9E-06 31.7 6.0 34 23-56 70-113 (373)
203 1mda_H Methylamine dehydrogena 95.1 0.013 4.3E-07 35.6 2.3 35 23-57 69-113 (368)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 95.1 0.078 2.7E-06 30.0 5.6 34 19-52 18-58 (314)
205 1yr2_A Prolyl oligopeptidase; 95.1 0.13 4.3E-06 33.3 7.0 42 19-60 268-316 (741)
206 3sjl_D Methylamine dehydrogena 95.0 0.044 1.5E-06 33.6 4.5 35 22-56 140-176 (386)
207 2z2n_A Virginiamycin B lyase; 94.5 0.3 1E-05 27.2 7.4 54 14-68 10-64 (299)
208 4fhn_B Nucleoporin NUP120; pro 94.4 0.042 1.4E-06 37.6 3.7 36 20-55 239-274 (1139)
209 1rwi_B Serine/threonine-protei 94.4 0.18 6.2E-06 27.9 5.9 32 20-51 151-182 (270)
210 1qks_A Cytochrome CD1 nitrite 94.3 0.18 6.2E-06 32.1 6.2 40 18-57 502-546 (567)
211 3dsm_A Uncharacterized protein 94.2 0.36 1.2E-05 28.1 7.0 31 20-52 226-256 (328)
212 3hrp_A Uncharacterized protein 93.6 0.28 9.4E-06 29.8 5.8 34 19-52 131-164 (409)
213 3no2_A Uncharacterized protein 93.3 0.28 9.5E-06 28.1 5.4 36 22-58 128-163 (276)
214 3dsm_A Uncharacterized protein 93.2 0.21 7.2E-06 29.1 4.8 48 21-68 174-232 (328)
215 3dr2_A Exported gluconolactona 93.1 0.6 2.1E-05 26.7 6.6 49 18-68 44-93 (305)
216 3hrp_A Uncharacterized protein 92.9 0.91 3.1E-05 27.5 7.9 39 20-59 324-363 (409)
217 3c75_H MADH, methylamine dehyd 92.9 0.065 2.2E-06 33.2 2.4 34 23-56 122-165 (426)
218 2qe8_A Uncharacterized protein 92.8 0.43 1.5E-05 27.9 5.8 48 20-68 249-298 (343)
219 2qe8_A Uncharacterized protein 92.7 0.26 8.8E-06 28.8 4.7 41 16-56 64-109 (343)
220 2z2n_A Virginiamycin B lyase; 92.3 0.8 2.7E-05 25.4 7.4 49 17-67 223-273 (299)
221 1yiq_A Quinohemoprotein alcoho 91.6 0.31 1E-05 31.7 4.4 33 25-57 481-513 (689)
222 2hz6_A Endoplasmic reticulum t 91.3 0.34 1.2E-05 28.8 4.2 29 29-57 8-36 (369)
223 3f7f_A Nucleoporin NUP120; nuc 91.2 0.67 2.3E-05 30.9 5.6 33 21-55 224-256 (729)
224 1kb0_A Quinohemoprotein alcoho 90.9 0.26 8.8E-06 32.0 3.5 35 23-57 481-515 (677)
225 3pbp_A Nucleoporin NUP82; beta 90.5 0.7 2.4E-05 29.2 5.1 33 17-49 123-158 (452)
226 2iwa_A Glutamine cyclotransfer 89.9 1.1 3.7E-05 26.1 5.4 35 21-56 23-60 (266)
227 3iuj_A Prolyl endopeptidase; h 89.7 2.4 8.4E-05 27.3 7.3 43 18-60 233-280 (693)
228 2qc5_A Streptogramin B lactona 89.6 1.6 5.6E-05 24.1 7.6 34 15-48 16-49 (300)
229 3dr2_A Exported gluconolactona 89.5 0.62 2.1E-05 26.6 4.1 30 21-50 190-225 (305)
230 2hz6_A Endoplasmic reticulum t 89.5 0.11 3.9E-06 30.9 1.0 34 23-56 42-75 (369)
231 3g4e_A Regucalcin; six bladed 89.4 1.8 6.2E-05 24.6 6.0 46 21-68 15-61 (297)
232 2ece_A 462AA long hypothetical 88.5 1.3 4.5E-05 28.0 5.3 30 20-49 322-352 (462)
233 2xe4_A Oligopeptidase B; hydro 87.3 0.86 2.9E-05 29.8 4.0 31 20-50 175-211 (751)
234 2ghs_A AGR_C_1268P; regucalcin 86.8 3.1 0.00011 24.0 7.2 29 20-48 180-209 (326)
235 2qc5_A Streptogramin B lactona 86.5 2.7 9.4E-05 23.2 7.6 34 18-52 61-94 (300)
236 1fwx_A Nitrous oxide reductase 84.3 1.8 6.1E-05 28.2 4.3 30 21-50 279-309 (595)
237 3sre_A PON1, serum paraoxonase 83.0 2.9 0.0001 25.3 4.7 29 21-49 223-252 (355)
238 2p4o_A Hypothetical protein; p 82.9 4.8 0.00016 23.0 6.1 47 21-68 214-262 (306)
239 3qqz_A Putative uncharacterize 82.3 5.3 0.00018 23.0 5.6 43 13-56 21-64 (255)
240 2ece_A 462AA long hypothetical 82.2 2.7 9.3E-05 26.6 4.5 35 22-56 191-244 (462)
241 3nol_A Glutamine cyclotransfer 81.4 2.6 8.8E-05 24.6 4.0 34 22-56 46-81 (262)
242 1fwx_A Nitrous oxide reductase 80.2 2.7 9.1E-05 27.4 4.0 31 18-49 330-361 (595)
243 2iwa_A Glutamine cyclotransfer 80.1 1.6 5.5E-05 25.4 2.8 31 26-56 112-142 (266)
244 3nok_A Glutaminyl cyclase; bet 80.1 3.2 0.00011 24.4 4.0 34 22-56 58-91 (268)
245 2fp8_A Strictosidine synthase; 80.1 1.5 5.2E-05 25.2 2.7 30 21-50 21-50 (322)
246 1flg_A Protein (quinoprotein e 79.9 2.8 9.7E-05 26.7 4.1 29 29-57 496-524 (582)
247 3das_A Putative oxidoreductase 78.2 7.2 0.00025 23.5 5.3 34 18-51 31-64 (347)
248 1w6s_A Methanol dehydrogenase 76.8 5.1 0.00017 25.8 4.6 28 29-56 483-510 (599)
249 2ad6_A Methanol dehydrogenase 76.5 4.4 0.00015 25.8 4.2 29 29-57 474-502 (571)
250 1kv9_A Type II quinohemoprotei 76.5 5 0.00017 26.0 4.5 32 26-57 465-496 (668)
251 2p4o_A Hypothetical protein; p 76.5 8.4 0.00029 21.9 7.3 31 19-49 32-62 (306)
252 2xe4_A Oligopeptidase B; hydro 75.0 7.2 0.00025 25.5 5.0 29 23-51 225-258 (751)
253 3mbr_X Glutamine cyclotransfer 74.3 3.4 0.00012 23.8 3.0 31 26-56 110-140 (243)
254 3nok_A Glutaminyl cyclase; bet 73.2 3.5 0.00012 24.2 2.9 30 27-56 142-171 (268)
255 1npe_A Nidogen, entactin; glyc 73.1 9.7 0.00033 21.1 7.5 31 21-51 38-69 (267)
256 3tc9_A Hypothetical hydrolase; 70.3 9 0.00031 23.4 4.4 48 20-68 138-186 (430)
257 3q7m_A Lipoprotein YFGL, BAMB; 69.8 10 0.00036 22.0 4.5 27 30-56 318-344 (376)
258 1cru_A Protein (soluble quinop 69.2 14 0.00047 22.9 5.1 33 19-51 27-59 (454)
259 2g8s_A Glucose/sorbosone dehyd 68.5 10 0.00035 22.5 4.3 27 20-47 19-46 (353)
260 3nol_A Glutamine cyclotransfer 66.6 4.6 0.00016 23.6 2.5 31 26-56 132-162 (262)
261 1yiq_A Quinohemoprotein alcoho 64.9 12 0.00041 24.4 4.4 35 23-57 239-292 (689)
262 1cru_A Protein (soluble quinop 61.7 26 0.00088 21.7 5.5 25 19-43 405-430 (454)
263 2p9w_A MAL S 1 allergenic prot 61.7 16 0.00056 22.1 4.3 29 21-49 187-215 (334)
264 2ism_A Putative oxidoreductase 60.4 21 0.00072 21.0 4.6 27 19-46 31-57 (352)
265 3ei3_A DNA damage-binding prot 56.5 38 0.0013 23.9 5.7 35 18-52 553-594 (1158)
266 1kb0_A Quinohemoprotein alcoho 55.8 17 0.00057 23.6 3.9 29 29-57 127-155 (677)
267 4hw6_A Hypothetical protein, I 53.6 36 0.0012 20.8 7.1 48 20-68 140-189 (433)
268 1q47_A Semaphorin 3A; beta pro 52.0 23 0.00077 22.5 3.9 28 17-44 460-487 (495)
269 3tc9_A Hypothetical hydrolase; 51.6 38 0.0013 20.6 6.4 30 21-50 228-258 (430)
270 3sbq_A Nitrous-oxide reductase 49.3 21 0.00073 23.7 3.5 29 21-49 325-354 (638)
271 3hxj_A Pyrrolo-quinoline quino 49.1 20 0.00067 20.1 3.1 31 23-55 141-171 (330)
272 1kv9_A Type II quinohemoprotei 47.7 30 0.001 22.4 4.0 35 23-57 234-287 (668)
273 2wg3_C Hedgehog-interacting pr 47.0 24 0.00081 22.1 3.4 29 20-48 15-44 (463)
274 4gz8_A Semaphorin-3A; multi-do 46.7 29 0.00098 23.1 3.9 32 16-48 467-498 (667)
275 3a9g_A Putative uncharacterize 46.0 22 0.00076 21.0 3.1 27 19-46 29-55 (354)
276 1npe_A Nidogen, entactin; glyc 45.0 38 0.0013 18.6 7.4 31 19-49 122-155 (267)
277 1flg_A Protein (quinoprotein e 43.0 45 0.0015 21.3 4.3 29 28-56 331-362 (582)
278 2xzh_A Clathrin heavy chain 1; 42.4 59 0.002 20.1 7.1 34 22-55 263-296 (365)
279 3mwp_A Nucleoprotein; structur 41.5 5.9 0.0002 25.3 0.1 18 35-52 162-179 (577)
280 4hvt_A Ritya.17583.B, post-pro 41.0 19 0.00064 23.9 2.4 30 23-52 133-168 (711)
281 1k3i_A Galactose oxidase precu 39.6 41 0.0014 21.6 3.7 28 23-50 247-275 (656)
282 2be1_A Serine/threonine-protei 37.7 45 0.0015 20.0 3.5 27 31-57 11-37 (339)
283 1uhe_A Aspartate 1-decarboxyla 35.5 32 0.0011 17.2 2.2 17 40-56 17-33 (97)
284 1vc3_B L-aspartate-alpha-decar 34.5 34 0.0012 17.0 2.2 17 40-56 18-34 (96)
285 3plx_B Aspartate 1-decarboxyla 33.8 35 0.0012 17.2 2.2 16 40-55 18-33 (102)
286 3kya_A Putative phosphatase; s 33.0 96 0.0033 19.8 4.7 29 19-47 310-339 (496)
287 1ukf_A Avirulence protein AVRP 32.0 50 0.0017 18.5 2.8 36 16-51 116-152 (188)
288 4a9v_A PHOX; hydrolase, beta-p 31.8 45 0.0015 22.0 3.0 20 18-37 530-549 (592)
289 3v64_C Agrin; beta propeller, 30.6 84 0.0029 18.4 7.8 30 20-49 204-234 (349)
290 4a2l_A BT_4663, two-component 30.4 1.2E+02 0.0039 19.9 7.5 34 18-51 405-438 (795)
291 3oug_A Aspartate 1-decarboxyla 30.2 43 0.0015 17.2 2.2 16 40-55 45-60 (114)
292 3zwu_A Alkaline phosphatase PH 30.1 53 0.0018 21.5 3.1 19 18-36 530-548 (592)
293 3nvq_A Semaphorin-7A; beta-pro 29.5 61 0.0021 21.3 3.3 30 17-47 417-446 (590)
294 3v65_B Low-density lipoprotein 28.5 97 0.0033 18.4 5.8 37 20-57 290-326 (386)
295 3rd7_A Acyl-COA thioesterase; 28.4 14 0.00049 21.5 0.3 19 25-43 264-282 (286)
296 1olz_A Semaphorin 4D; developm 28.0 1E+02 0.0034 20.4 4.2 28 17-44 448-477 (663)
297 1bpo_A Protein (clathrin); cla 27.3 1.3E+02 0.0044 19.5 7.1 34 22-55 262-295 (494)
298 2c45_A Aspartate 1-decarboxyla 27.2 53 0.0018 17.5 2.3 17 39-55 41-57 (139)
299 3al9_A Plexin-A2; beta-propell 27.0 46 0.0016 21.4 2.4 30 18-48 449-479 (539)
300 1pqh_A Aspartate 1-decarboxyla 26.6 52 0.0018 17.6 2.2 16 40-55 59-74 (143)
301 3u0a_A Acyl-COA thioesterase I 26.4 23 0.00079 20.6 0.9 20 25-44 257-276 (285)
302 3gw6_A Endo-N-acetylneuraminid 25.9 48 0.0017 19.7 2.2 23 27-49 43-72 (275)
303 3oky_B Putative uncharacterize 23.4 58 0.002 21.3 2.4 29 18-47 469-497 (565)
304 3sov_A LRP-6, low-density lipo 23.3 1.2E+02 0.004 17.6 7.8 30 20-49 167-197 (318)
305 2ldu_A Heat shock factor prote 22.7 69 0.0023 16.4 2.2 12 24-35 37-48 (125)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.49 E-value=1.1e-13 Score=82.56 Aligned_cols=57 Identities=14% Similarity=0.100 Sum_probs=51.7
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEe-ccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIV-AMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~-~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|||++|++|+.|++|++||+++++++..+ .+|..+|.+++||
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fS 321 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTIS 321 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEEC
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEEC
Confidence 45678889999999999999999999999999999998877764 7899999999996
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.45 E-value=2.2e-13 Score=83.76 Aligned_cols=57 Identities=25% Similarity=0.283 Sum_probs=52.1
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
+.+.+|..+|.+++|+|||++|++++.|+.|++||. +++++..+.+|...|.+++|+
T Consensus 10 ~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fs 66 (577)
T 2ymu_A 10 NRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFS 66 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEEC
T ss_pred eEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEEC
Confidence 457799999999999999999999999999999995 567888899999999999986
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.45 E-value=5.4e-13 Score=79.27 Aligned_cols=56 Identities=18% Similarity=0.165 Sum_probs=52.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
..+|...|.+++|+|++++|++++.|++|++||+.+++++..+.+|...|.+++|+
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~ 178 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAAS 178 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEec
Confidence 34799999999999999999999999999999999988888999999999999885
No 4
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.41 E-value=1.7e-12 Score=76.94 Aligned_cols=59 Identities=8% Similarity=-0.030 Sum_probs=53.3
Q ss_pred hccCCCCCCCeEEEEECCCCCEEEEecCCCc-EEEEECCCCCccEEec-c-CCCcEEEEEeC
Q 035276 11 TNQNPNKSIEVLCSTLKDDGITVFSGGCDKQ-VKTWPLLSGGQPVIVA-M-HDAPIKTIRLL 69 (69)
Q Consensus 11 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~-v~iwd~~t~~~~~~~~-~-h~~~i~~v~~s 69 (69)
.....+|..+|.+++|+|++++|++++.|++ |++||+.+++++..+. + |...|.+++|+
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s 249 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWS 249 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEEC
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEEC
Confidence 3456789999999999999999999999999 9999999988888887 5 99999999986
No 5
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.41 E-value=2.3e-12 Score=74.58 Aligned_cols=57 Identities=11% Similarity=0.098 Sum_probs=50.6
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCC--CccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSG--GQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~--~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|+|++|++|+.|++|++||+..+ +.+..+.+|..+|.+++|+
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s 62 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWA 62 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEEC
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEec
Confidence 35689999999999999999999999999999999753 4567889999999999984
No 6
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.40 E-value=1.7e-12 Score=75.01 Aligned_cols=57 Identities=12% Similarity=0.074 Sum_probs=49.1
Q ss_pred cCCCCCCCeEEEEECCC-CCEEEEecCCCcEEEEECCCCCc-----cEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDD-GITVFSGGCDKQVKTWPLLSGGQ-----PVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~-~~~l~s~~~d~~v~iwd~~t~~~-----~~~~~~h~~~i~~v~~s 69 (69)
.+.+|.++|.+++|+|+ +++|++|+.|++|++||+.+++. ...+.+|...|.++.|+
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s 95 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS 95 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEEC
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEEC
Confidence 46789999999999997 68999999999999999976543 34578899999999885
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.39 E-value=1.4e-12 Score=76.22 Aligned_cols=59 Identities=20% Similarity=0.266 Sum_probs=53.7
Q ss_pred hccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 11 TNQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 11 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.....+|..+|.+++|+|++++|++++.|++|++||+.+++++..+.+|...|.++.|+
T Consensus 58 ~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~ 116 (319)
T 3frx_A 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDID 116 (319)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred ceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEc
Confidence 34456899999999999999999999999999999999988888899999999999885
No 8
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.37 E-value=3.7e-12 Score=74.87 Aligned_cols=58 Identities=16% Similarity=0.193 Sum_probs=53.4
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|++.++++++.|++|++||+.+++.+..+.+|...|.+++|+
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~s 127 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFS 127 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEEC
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEEC
Confidence 3456899999999999999999999999999999999988888899999999999985
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.36 E-value=3.6e-12 Score=74.78 Aligned_cols=57 Identities=18% Similarity=0.148 Sum_probs=52.7
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|...|.+++|+|++++|++++.|++|++||+.+++++..+.+|...|.+++|+
T Consensus 243 ~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s 299 (321)
T 3ow8_A 243 TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN 299 (321)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEEC
Confidence 456789999999999999999999999999999999988888899999999999985
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.36 E-value=5.5e-12 Score=75.96 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=52.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
..+|..+|.+++|+|++++|++|+.|++|++||+.+++....+.+|...|.+++|+
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~ 159 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEEC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEc
Confidence 44789999999999999999999999999999999988888999999999999985
No 11
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.36 E-value=1.3e-12 Score=76.28 Aligned_cols=59 Identities=14% Similarity=0.210 Sum_probs=46.1
Q ss_pred hccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC--ccEEeccCCCcEEEEEeC
Q 035276 11 TNQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG--QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 11 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~--~~~~~~~h~~~i~~v~~s 69 (69)
.....+|..+|.+++|+|+|++|++|+.|++|++||+.++. .+..+.+|..+|.+++|+
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~ 66 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWA 66 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEEC
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeC
Confidence 33456899999999999999999999999999999998754 345688999999999984
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.35 E-value=1.1e-12 Score=78.11 Aligned_cols=58 Identities=12% Similarity=0.124 Sum_probs=52.5
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
+.+.+|.++|.+++|+|++++|++|+.|++|++||+.++++...+..|...|.+++|+
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s 117 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFA 117 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEEC
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEEC
Confidence 3467899999999999999999999999999999999988888888999999888875
No 13
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.35 E-value=1.7e-12 Score=75.34 Aligned_cols=58 Identities=12% Similarity=0.170 Sum_probs=52.3
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
+...+|..+|.+++|+|++++|++++.|++|++||++++..+..+..|..+|.+++|+
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~ 64 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFI 64 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEe
Confidence 3456799999999999999999999999999999999988888888999999998874
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.33 E-value=8.4e-12 Score=73.36 Aligned_cols=58 Identities=9% Similarity=0.115 Sum_probs=52.9
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
..+.+|..+|.+++|+|++++|++++.|++|++||+.++..+..+..|...|.+++|+
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s 106 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEEC
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEEC
Confidence 3456899999999999999999999999999999999988888888999999999885
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.33 E-value=8.2e-12 Score=74.15 Aligned_cols=55 Identities=22% Similarity=0.239 Sum_probs=51.3
Q ss_pred CCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+|..+|.+++|+|++++|++++.|+.|++||+.+++++..+.+|...|.+++|+
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAAC 190 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 4788999999999999999999999999999999988888899999999999885
No 16
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.32 E-value=1.3e-11 Score=71.70 Aligned_cols=57 Identities=18% Similarity=0.204 Sum_probs=52.8
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+.+|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 83 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVD 83 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEc
Confidence 456899999999999999999999999999999999988888899999999999985
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.31 E-value=1.7e-11 Score=70.84 Aligned_cols=57 Identities=18% Similarity=0.221 Sum_probs=52.4
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|++++|++++.|+.|++||+.+++....+.+|...|.+++|+
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~ 74 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 74 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEc
Confidence 456899999999999999999999999999999999988888889999999999985
No 18
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.31 E-value=1e-11 Score=72.88 Aligned_cols=58 Identities=9% Similarity=0.117 Sum_probs=52.7
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|++++|++++.|+.|++||+.++.....+.+|...|.+++|+
T Consensus 200 ~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 200 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 257 (321)
T ss_dssp EEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC
Confidence 3456789999999999999999999999999999999988888899999999999985
No 19
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.30 E-value=9.9e-12 Score=73.84 Aligned_cols=56 Identities=9% Similarity=-0.118 Sum_probs=48.7
Q ss_pred cCCCCCCCeEEEEECCCC-CEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDG-ITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+.+|..+|.+++|+|++ ++|++++.|++|++||+.+++ +..+.+|...|.+++|+
T Consensus 252 ~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~-~~~~~~H~~~V~~v~~s 308 (344)
T 4gqb_B 252 SSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE-LFRSQAHRDFVRDATWS 308 (344)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE-EEEECCCSSCEEEEEEC
T ss_pred EEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc-EEEEcCCCCCEEEEEEe
Confidence 455799999999999998 578999999999999999864 55678999999999986
No 20
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.29 E-value=1.6e-11 Score=73.81 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=50.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
..+|...|.+++|+|+|++|++|+.|+.|++||+++++++..+.+|...+.++.|
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~ 197 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW 197 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee
Confidence 4567888999999999999999999999999999998888889999999988876
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.28 E-value=1.2e-11 Score=73.23 Aligned_cols=58 Identities=17% Similarity=0.195 Sum_probs=51.7
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
+.+.+|..+|.+++|+|++++|++++.|++|++||..++.....+..|...|.+++|+
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~s 115 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYA 115 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEEC
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEEC
Confidence 3456899999999999999999999999999999999888777788888888888875
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.28 E-value=2.6e-11 Score=71.30 Aligned_cols=57 Identities=23% Similarity=0.365 Sum_probs=52.4
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|+++++++++.|+.|++||+.++.+...+.+|...|.+++|+
T Consensus 179 ~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~ 235 (340)
T 1got_B 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF 235 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc
Confidence 455789999999999999999999999999999999988888899999999999885
No 23
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.28 E-value=1.1e-11 Score=72.02 Aligned_cols=58 Identities=14% Similarity=0.136 Sum_probs=52.9
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.....|..+|.+++|+|++++|++++.|++|++||+.+++++..+.+|...|.+++|+
T Consensus 49 ~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 106 (304)
T 2ynn_A 49 RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVH 106 (304)
T ss_dssp EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEc
Confidence 3445788899999999999999999999999999999988888899999999999985
No 24
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.27 E-value=3.3e-12 Score=76.59 Aligned_cols=57 Identities=16% Similarity=0.102 Sum_probs=51.0
Q ss_pred cCCCCCCCeEEEEECC--------CCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKD--------DGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~--------~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+.+|...|.+++|+| |+++|++++.|++|++||+.++.+...+.+|..+|.+++|+
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~ 195 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFR 195 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEE
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEEC
Confidence 4678999999999998 88999999999999999998877777777899999999884
No 25
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.27 E-value=1.9e-11 Score=70.09 Aligned_cols=57 Identities=18% Similarity=0.080 Sum_probs=49.7
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC----ccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG----QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~----~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|++++|++++.|+.|++||+.++. ....+.+|...|.+++|+
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 66 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWA 66 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEEC
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEc
Confidence 456899999999999999999999999999999998754 334567899999999985
No 26
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.27 E-value=1.2e-11 Score=74.42 Aligned_cols=58 Identities=14% Similarity=0.172 Sum_probs=53.0
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|++++|++|+.|++|++||+.+++++..+.+|...|.+++|+
T Consensus 144 ~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~ 201 (410)
T 1vyh_C 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIM 201 (410)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEEC
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEe
Confidence 3456799999999999999999999999999999999988888889999999999885
No 27
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.26 E-value=3.6e-11 Score=71.40 Aligned_cols=57 Identities=21% Similarity=0.355 Sum_probs=52.6
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~ 190 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAII 190 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEE
T ss_pred ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEc
Confidence 345899999999999999999999999999999999988888899999999999884
No 28
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.26 E-value=1.6e-11 Score=77.80 Aligned_cols=58 Identities=21% Similarity=0.267 Sum_probs=53.2
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....+|...|.+++|+|++++|++|+.|++|++||+.++.+...+.+|...|.+++|+
T Consensus 424 ~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s 481 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFS 481 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred ceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEe
Confidence 3456899999999999999999999999999999999988888889999999999985
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.26 E-value=2.8e-11 Score=74.43 Aligned_cols=57 Identities=23% Similarity=0.309 Sum_probs=51.1
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
..+.+|..+|.+++|+||+++|++++.|++|++||+ +++++..+.+|...|.+++|+
T Consensus 51 ~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s 107 (577)
T 2ymu_A 51 QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS 107 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEEC
T ss_pred EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEECCCCCEEEEEEC
Confidence 345689999999999999999999999999999996 457788899999999999985
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.25 E-value=3.4e-11 Score=70.62 Aligned_cols=57 Identities=19% Similarity=0.186 Sum_probs=45.1
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCC-C---CccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLS-G---GQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t-~---~~~~~~~~h~~~i~~v~~s 69 (69)
.+.+|..+|.+++|+|++++|++++.|++|++||+.. + +++..+.+|...|.+++|+
T Consensus 102 ~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 102 IIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 3567999999999999999999999999999999943 2 2345678999999999985
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.24 E-value=4.5e-11 Score=70.45 Aligned_cols=56 Identities=13% Similarity=0.097 Sum_probs=49.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC--ccEEeccCCCcEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG--QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~--~~~~~~~h~~~i~~v~~s 69 (69)
..+|..+|.+++|+|++++|++++.|+++++||+.++. ++..+.+|...|.+++|+
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~s 114 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA 114 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEEC
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEe
Confidence 35799999999999999999999999999999998753 356788999999999985
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.24 E-value=5.9e-11 Score=68.54 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=52.1
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|++++|++++.|+.|++||+.+++++..+.+|...|.++.|+
T Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 116 (312)
T 4ery_A 60 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN 116 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 345789999999999999999999999999999999988888899999999999885
No 33
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.24 E-value=4.9e-11 Score=74.86 Aligned_cols=57 Identities=14% Similarity=0.128 Sum_probs=51.1
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEec-------cCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVA-------MHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~-------~h~~~i~~v~~s 69 (69)
...+|...|.+++|+||+++|++++.|++|++||+.++++...+. +|...|.+++|+
T Consensus 185 ~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~s 248 (611)
T 1nr0_A 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS 248 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC
T ss_pred eeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEEC
Confidence 456799999999999999999999999999999999887776663 799999999986
No 34
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.24 E-value=2.4e-11 Score=70.49 Aligned_cols=51 Identities=16% Similarity=0.077 Sum_probs=47.6
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+|.+++|+|++++|++++.|+.|++||+.+++++..+.+|..+|.+++|+
T Consensus 274 ~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 324 (368)
T 3mmy_A 274 YAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFN 324 (368)
T ss_dssp CCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEEC
T ss_pred cceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEEC
Confidence 379999999999999999999999999999988888899999999999986
No 35
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.23 E-value=3.2e-11 Score=71.59 Aligned_cols=57 Identities=9% Similarity=-0.158 Sum_probs=48.2
Q ss_pred ccCCCCCCCeEEEEECCCC-CEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDG-ITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|++ ++|++++.|++|++||+++++.+.. .+|...|.+++|+
T Consensus 263 ~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~-~~H~~~V~~vafs 320 (357)
T 4g56_B 263 QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD-LSHRDFVTGVAWS 320 (357)
T ss_dssp EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE-CCCSSCEEEEEEC
T ss_pred EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE-CCCCCCEEEEEEe
Confidence 3456789999999999987 5789999999999999998655544 4799999999986
No 36
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.23 E-value=1e-10 Score=69.74 Aligned_cols=57 Identities=16% Similarity=0.170 Sum_probs=51.0
Q ss_pred cCCCCCCCeEEEEECC-CCCEEEEecCCCcEEEEECCCC-------CccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKD-DGITVFSGGCDKQVKTWPLLSG-------GQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iwd~~t~-------~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+| ++++|++++.|+.|++||+.++ ..+..+.+|...|.+++|+
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 140 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWH 140 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEEC
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEEC
Confidence 4557999999999999 8999999999999999999886 4567788999999999985
No 37
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.22 E-value=7e-11 Score=74.16 Aligned_cols=57 Identities=16% Similarity=0.250 Sum_probs=49.5
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCc--cEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQ--PVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~--~~~~~~h~~~i~~v~~s 69 (69)
...+|...|.+++|+|||++|++|+.|++|++||+.+++. ...+.+|..+|.+++|+
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs 112 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWD 112 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEEC
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEEC
Confidence 4558999999999999999999999999999999976443 34678899999999986
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.22 E-value=4.3e-11 Score=70.17 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=50.3
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCC--CccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSG--GQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~--~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|++++|++++.|++|++||+.++ +++..+.+|...|.+++|+
T Consensus 148 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~ 206 (330)
T 2hes_X 148 VLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFD 206 (330)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEec
Confidence 45679999999999999999999999999999998765 4567788999999999885
No 39
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.21 E-value=8.9e-11 Score=67.91 Aligned_cols=58 Identities=19% Similarity=0.245 Sum_probs=49.6
Q ss_pred ccCCCCCCCeEEEEECCC--CCEEEEecCCCcEEEEECCCCC--ccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDD--GITVFSGGCDKQVKTWPLLSGG--QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~--~~~l~s~~~d~~v~iwd~~t~~--~~~~~~~h~~~i~~v~~s 69 (69)
..+.+|..+|.+++|+++ +++|++++.|++|++||+.++. .+..+.+|...|.+++|+
T Consensus 47 ~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~ 108 (297)
T 2pm7_B 47 DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWA 108 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEEC
T ss_pred EEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeC
Confidence 445689999999999874 8999999999999999998864 456678899999999885
No 40
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.9e-11 Score=71.26 Aligned_cols=57 Identities=12% Similarity=0.104 Sum_probs=49.9
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECC--CCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLL--SGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~--t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|++++|++++.|+.|++||+. ++..+..+.+|...|.+++|+
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~ 64 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWA 64 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeC
Confidence 445799999999999999999999999999999997 444556788999999999985
No 41
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.20 E-value=1.2e-10 Score=68.31 Aligned_cols=54 Identities=19% Similarity=0.235 Sum_probs=48.3
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCcc-EEecc-CCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQP-VIVAM-HDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~-~~~~~-h~~~i~~v~~s 69 (69)
.+..++.+++|+|++.+|++|+.|+.|++||+.+++.+ ..+.. |..+|.+++|+
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEEC
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEe
Confidence 45567999999999999999999999999999998777 67777 99999999985
No 42
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.19 E-value=1.1e-10 Score=69.74 Aligned_cols=52 Identities=15% Similarity=0.339 Sum_probs=47.2
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 18 SIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...|.+++|+|++++|++++.|+.|++||+.+++....+.+|...|.+++|+
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~ 174 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYF 174 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEc
Confidence 3358999999999999999999999999999987778889999999999985
No 43
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.18 E-value=1.5e-10 Score=66.34 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=48.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
..+|...|.+++|+|++++|++|+.|++|++||+++++++..+.+|...+.++.+
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~ 117 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW 117 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec
Confidence 4567888999999999999999999999999999998888888899888876653
No 44
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.18 E-value=1.2e-10 Score=68.66 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=49.9
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCc---cEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQ---PVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~---~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|++++|++++.|++|++||+.++.. +..+.+|...|.+++|+
T Consensus 99 ~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 99 TTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred EEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 34568999999999999999999999999999999987543 34567899999999885
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.17 E-value=9.4e-11 Score=68.89 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=46.6
Q ss_pred hccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC---ccEEeccCCCcEEEEEeC
Q 035276 11 TNQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG---QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 11 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~---~~~~~~~h~~~i~~v~~s 69 (69)
.....+|..+|.+++|+|++++|++++.|+.|++||+.++. ....+.+|...|.+++|+
T Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 109 (377)
T 3dwl_C 48 ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWS 109 (377)
T ss_dssp CCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECC
T ss_pred EEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEEC
Confidence 34556799999999999999999999999999999999866 456677899999999985
No 46
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.16 E-value=2e-10 Score=66.60 Aligned_cols=59 Identities=15% Similarity=0.320 Sum_probs=50.6
Q ss_pred hccCCCCCCCeEEEEECCC---CCEEEEecCCCcEEEEECCC-CCcc-EEeccCCCcEEEEEeC
Q 035276 11 TNQNPNKSIEVLCSTLKDD---GITVFSGGCDKQVKTWPLLS-GGQP-VIVAMHDAPIKTIRLL 69 (69)
Q Consensus 11 ~~~~~~~~~~v~~~~~s~~---~~~l~s~~~d~~v~iwd~~t-~~~~-~~~~~h~~~i~~v~~s 69 (69)
.....+|..+|.+++|+|+ |++|++++.|+.|++||+.+ +..+ ..+.+|...|.+++|+
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~ 95 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWS 95 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEEC
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEEC
Confidence 3445689999999999999 59999999999999999987 4444 5678899999999985
No 47
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.15 E-value=1.8e-10 Score=68.89 Aligned_cols=56 Identities=18% Similarity=0.244 Sum_probs=51.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
..+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 306 ~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~ 361 (393)
T 1erj_A 306 YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA 361 (393)
T ss_dssp EECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEec
Confidence 34788899999999999999999999999999999988888899999999998874
No 48
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.15 E-value=2.2e-10 Score=75.78 Aligned_cols=56 Identities=16% Similarity=0.243 Sum_probs=52.3
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
..+|...|.+++|+|++++|++++.|++|++||+.+++.+..+.+|...|.+++|+
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s 666 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFS 666 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEe
Confidence 34789999999999999999999999999999999988888899999999999986
No 49
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.15 E-value=2.8e-10 Score=67.41 Aligned_cols=56 Identities=13% Similarity=0.190 Sum_probs=50.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...|...|..++|+|+++.|++++.|++|++||+++++.+..+.+|...|.++.|+
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~ 205 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLA 205 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEE
Confidence 34688999999999999999999999999999999988888899999999988763
No 50
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.13 E-value=1.8e-10 Score=67.17 Aligned_cols=57 Identities=18% Similarity=0.159 Sum_probs=48.8
Q ss_pred cCCCCCCCeEEEEECC--CCCEEEEecCCCcEEEEECCCCC--ccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKD--DGITVFSGGCDKQVKTWPLLSGG--QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~--~~~~l~s~~~d~~v~iwd~~t~~--~~~~~~~h~~~i~~v~~s 69 (69)
.+.+|..+|.+++|++ +++.|++++.|++|++||++++. +...+.+|...|.+++|+
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~ 112 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWA 112 (316)
T ss_dssp EEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEEC
T ss_pred EEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEEC
Confidence 4568999999999986 48899999999999999998864 345677899999999885
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.12 E-value=8.7e-11 Score=69.04 Aligned_cols=54 Identities=15% Similarity=0.110 Sum_probs=48.7
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCc----cEEeccCCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQ----PVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~----~~~~~~h~~~i~~v~~s 69 (69)
.|..+|.+++|+|++++|++++.|+.|++||+.++++ +..+.+|..+|.+++|+
T Consensus 203 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 260 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWA 260 (377)
T ss_dssp CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEE
T ss_pred cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEc
Confidence 7889999999999999999999999999999999877 67788999999999884
No 52
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.11 E-value=1.3e-10 Score=73.82 Aligned_cols=58 Identities=12% Similarity=0.174 Sum_probs=52.9
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
+...+|..+|.+++|+|++++|++++.|+.|++||+.++..+..+.+|..+|.+++|+
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s 64 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFI 64 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEe
Confidence 3456789999999999999999999999999999999988888888999999999985
No 53
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.11 E-value=2.7e-10 Score=68.77 Aligned_cols=54 Identities=11% Similarity=0.065 Sum_probs=45.8
Q ss_pred CCCCCeEEEEECC-CCCEEEEecCCCcEEEEECCCCCccE--EeccCCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKD-DGITVFSGGCDKQVKTWPLLSGGQPV--IVAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iwd~~t~~~~~--~~~~h~~~i~~v~~s 69 (69)
+|...|.+++|+| +++.|++|+.||.|++||+.+++... .+.+|...|.+++|+
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~ 173 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFN 173 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEEC
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEe
Confidence 5778899999999 56789999999999999998765443 456899999999985
No 54
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.10 E-value=3.8e-10 Score=67.23 Aligned_cols=58 Identities=16% Similarity=0.282 Sum_probs=51.5
Q ss_pred ccCCCCCCCeEEEEECCCC-CEEEEecCCCcEEEEECCCCCccEEe--ccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDG-ITVFSGGCDKQVKTWPLLSGGQPVIV--AMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iwd~~t~~~~~~~--~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|++ ..|++++.|+.|++||+.+++.+..+ ..|...|.+++|+
T Consensus 125 ~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 185 (402)
T 2aq5_A 125 ITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS 185 (402)
T ss_dssp EEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEEC
T ss_pred EEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEEC
Confidence 3455799999999999998 69999999999999999998777788 7899999999985
No 55
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.10 E-value=5.9e-10 Score=65.78 Aligned_cols=57 Identities=11% Similarity=0.079 Sum_probs=49.7
Q ss_pred cCCCCCCCeEEEEECCCC-CEEEEecCCCcEEEEECCCCCccEEec--cCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDG-ITVFSGGCDKQVKTWPLLSGGQPVIVA--MHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iwd~~t~~~~~~~~--~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|++ ++|++++.|+.|++||+.+++....+. +|...|.+++|+
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~ 127 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFN 127 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeC
Confidence 456799999999999999 899999999999999999877665554 699999999884
No 56
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.09 E-value=4.6e-10 Score=74.25 Aligned_cols=58 Identities=21% Similarity=0.303 Sum_probs=53.1
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 651 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~ 708 (1249)
T 3sfz_A 651 LDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFT 708 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEe
Confidence 3445799999999999999999999999999999999988888899999999999885
No 57
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.09 E-value=2.4e-10 Score=68.05 Aligned_cols=58 Identities=10% Similarity=0.131 Sum_probs=46.7
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCC-------CcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHD-------APIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~-------~~i~~v~~s 69 (69)
....+|..+|.+++|+|++++|++++.|++|++||+.++.++..+..+. ..|.+++|+
T Consensus 243 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 307 (380)
T 3iz6_a 243 RTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFS 307 (380)
T ss_dssp EEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEEC
T ss_pred EEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEEC
Confidence 3456799999999999999999999999999999999977666554332 236777774
No 58
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.09 E-value=1.8e-10 Score=65.74 Aligned_cols=58 Identities=14% Similarity=0.032 Sum_probs=51.4
Q ss_pred hccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 11 TNQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 11 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+.+|..+|.+++| +++++|++++.|+.|++||+.++.....+..|...|.+++|+
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~ 68 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYD 68 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEE
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEEC
Confidence 3456789999999999 999999999999999999998877777788899999999884
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.09 E-value=5.4e-10 Score=68.75 Aligned_cols=58 Identities=9% Similarity=0.017 Sum_probs=52.3
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEecc-CCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAM-HDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~-h~~~i~~v~~s 69 (69)
.....|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+.+ |...|.+++|+
T Consensus 482 ~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~s 540 (615)
T 1pgu_A 482 DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWK 540 (615)
T ss_dssp ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEEC
T ss_pred cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEc
Confidence 45567899999999999999999999999999999999877777777 99999999985
No 60
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.09 E-value=2.8e-10 Score=67.33 Aligned_cols=57 Identities=16% Similarity=0.087 Sum_probs=51.6
Q ss_pred cCC-CCCCCeEEEEECC-CCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNP-NKSIEVLCSTLKD-DGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~-~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
... +|..+|.+++|+| ++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 256 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s 314 (416)
T 2pm9_A 256 TLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFA 314 (416)
T ss_dssp CCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEEC
T ss_pred EeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEEC
Confidence 344 7889999999999 89999999999999999999988888889999999999885
No 61
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.09 E-value=4.9e-10 Score=67.52 Aligned_cols=57 Identities=16% Similarity=0.248 Sum_probs=52.1
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|+++.+++++.|+.|++||+.+++++..+.+|...|.++.|+
T Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 361 (464)
T 3v7d_B 305 ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS 361 (464)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc
Confidence 345788999999999999999999999999999999988888899999999999875
No 62
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.09 E-value=7.5e-10 Score=64.23 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=50.4
Q ss_pred cCCCCCCCeEEEEECC-CCCEEEEecCCCcEEEEECCCCCccEEe---ccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKD-DGITVFSGGCDKQVKTWPLLSGGQPVIV---AMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iwd~~t~~~~~~~---~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+| +++.|++++.|+.|++||+.+++.+..+ .+|...|.+++|+
T Consensus 110 ~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 110 HYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp EEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 3446899999999999 8999999999999999999987777766 6899999999985
No 63
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.09 E-value=8e-10 Score=64.92 Aligned_cols=57 Identities=14% Similarity=0.231 Sum_probs=48.5
Q ss_pred cCCCCCCCeEEEEECC-CCCEEEEecCCCcEEEEECCCCCccEEe-------------ccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKD-DGITVFSGGCDKQVKTWPLLSGGQPVIV-------------AMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iwd~~t~~~~~~~-------------~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+| ++++|++++.|+.|++||+.++.....+ .+|...|.+++|+
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 108 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWY 108 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEEC
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEc
Confidence 4457999999999999 9999999999999999999986654433 2599999999985
No 64
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.09 E-value=6.8e-10 Score=64.82 Aligned_cols=57 Identities=16% Similarity=0.330 Sum_probs=50.0
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|+++.|++++.|++|++||+.. .++..+.+|...|.+++|+
T Consensus 101 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~ 157 (319)
T 3frx_A 101 QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVV 157 (319)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEEC
T ss_pred EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEc
Confidence 34557999999999999999999999999999999975 6777888999999988763
No 65
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.08 E-value=4.6e-10 Score=71.50 Aligned_cols=50 Identities=10% Similarity=0.120 Sum_probs=43.6
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEECCCCCc-------cEEe----ccCCCcEEEEEeC
Q 035276 20 EVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQ-------PVIV----AMHDAPIKTIRLL 69 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~-------~~~~----~~h~~~i~~v~~s 69 (69)
.+.+++|+|||++|++|+.|++|++||+.++.. +..+ .+|..+|.+++|+
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS 191 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY 191 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc
Confidence 599999999999999999999999999998643 3555 6788899999985
No 66
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.08 E-value=3.8e-10 Score=66.28 Aligned_cols=59 Identities=20% Similarity=0.207 Sum_probs=49.4
Q ss_pred hccCCCCCCCeEEEEE-----CC-CCCEEEEecCCCcEEEEECCCCC-------ccEEeccCCCcEEEEEeC
Q 035276 11 TNQNPNKSIEVLCSTL-----KD-DGITVFSGGCDKQVKTWPLLSGG-------QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 11 ~~~~~~~~~~v~~~~~-----s~-~~~~l~s~~~d~~v~iwd~~t~~-------~~~~~~~h~~~i~~v~~s 69 (69)
...+.+|..+|.+++| ++ ++++|++|+.|++|++||+..++ ....+.+|...|.+++|+
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~ 85 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALS 85 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEEC
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEEC
Confidence 3456689999999999 77 89999999999999999997543 235678999999999885
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.07 E-value=5.2e-10 Score=65.22 Aligned_cols=59 Identities=12% Similarity=-0.009 Sum_probs=52.6
Q ss_pred hccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 11 TNQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 11 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
......|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+..|..+|.+++|+
T Consensus 195 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 253 (372)
T 1k8k_C 195 MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFI 253 (372)
T ss_dssp EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEE
T ss_pred eEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEe
Confidence 34455788999999999999999999999999999999988888888999999999874
No 68
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.07 E-value=9e-10 Score=67.77 Aligned_cols=56 Identities=9% Similarity=0.071 Sum_probs=50.4
Q ss_pred CCC-CCCCeEEEEECC----------CCCEEEEecCCCcEEEEECCCC-CccEEeccCCCcEEEEEeC
Q 035276 14 NPN-KSIEVLCSTLKD----------DGITVFSGGCDKQVKTWPLLSG-GQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~-~~~~v~~~~~s~----------~~~~l~s~~~d~~v~iwd~~t~-~~~~~~~~h~~~i~~v~~s 69 (69)
..+ |..+|.+++|+| ++++|++++.|+.|++||+.++ .++..+.+|...|.+++|+
T Consensus 526 ~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s 593 (615)
T 1pgu_A 526 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE 593 (615)
T ss_dssp CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEE
T ss_pred eecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEc
Confidence 344 899999999999 9999999999999999999987 5677888999999999985
No 69
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.07 E-value=5.5e-10 Score=63.94 Aligned_cols=57 Identities=12% Similarity=0.170 Sum_probs=48.9
Q ss_pred cCCCCCCCeEEEEECC--CCCEEEEecCCCcEEEEECCCCC---------ccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKD--DGITVFSGGCDKQVKTWPLLSGG---------QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~--~~~~l~s~~~d~~v~iwd~~t~~---------~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+| ++++|++++.|+.|++||+.++. .+..+..|...|.+++|+
T Consensus 52 ~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 119 (351)
T 3f3f_A 52 SWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFA 119 (351)
T ss_dssp EEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEEC
T ss_pred eeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEc
Confidence 3457899999999999 69999999999999999998763 356677899999999885
No 70
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.07 E-value=1.1e-09 Score=63.41 Aligned_cols=57 Identities=12% Similarity=0.177 Sum_probs=49.8
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.....|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+. |...|.+++|+
T Consensus 68 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~ 124 (369)
T 3zwl_B 68 GTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFS 124 (369)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEEC
T ss_pred hhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEc
Confidence 3455789999999999999999999999999999999987777665 88889998875
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.07 E-value=3.1e-10 Score=74.46 Aligned_cols=54 Identities=9% Similarity=0.004 Sum_probs=47.8
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC--------------------------------------------
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG-------------------------------------------- 51 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~-------------------------------------------- 51 (69)
+|...|.+++|+||+++|++|+.|++|++||+.+++
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 788899999999999999999999999999997652
Q ss_pred -ccEEeccCCCcEEEEEeC
Q 035276 52 -QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 52 -~~~~~~~h~~~i~~v~~s 69 (69)
++..+.+|...|++++||
T Consensus 566 ~~~~~l~~h~~~V~svafS 584 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNS 584 (902)
T ss_dssp EEEEEECCCSCSEEEEEEC
T ss_pred ceeEEEEcCCCcEEEEEec
Confidence 245677899999999986
No 72
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.06 E-value=4.6e-10 Score=68.58 Aligned_cols=58 Identities=5% Similarity=-0.096 Sum_probs=49.5
Q ss_pred ccCCCCCCCeEEEEECCC-CCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDD-GITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~-~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|+ +..|++++.|++|++||+.++.......+|...|.+++|+
T Consensus 143 ~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~ws 201 (434)
T 2oit_A 143 KLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWS 201 (434)
T ss_dssp ECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEEC
T ss_pred eccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEc
Confidence 344568999999999998 7899999999999999999875555566788999999986
No 73
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.06 E-value=9.8e-10 Score=65.60 Aligned_cols=57 Identities=26% Similarity=0.352 Sum_probs=51.5
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|++++|++++.|+.|++||+.++.....+..|...|.+++|+
T Consensus 212 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~ 268 (401)
T 4aez_A 212 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWC 268 (401)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEEC
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEEC
Confidence 345789999999999999999999999999999999977777888899999999885
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.05 E-value=7.4e-10 Score=66.77 Aligned_cols=57 Identities=18% Similarity=0.357 Sum_probs=50.8
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|++ .+++++.|++|++||+.+++++..+.+|...|.+++|+
T Consensus 156 ~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 212 (464)
T 3v7d_B 156 LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIV 212 (464)
T ss_dssp EEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE
T ss_pred EEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEe
Confidence 3455799999999999988 89999999999999999988888889999999998873
No 75
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.05 E-value=3.2e-10 Score=66.09 Aligned_cols=54 Identities=9% Similarity=0.094 Sum_probs=48.8
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC--ccEEeccCCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG--QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~--~~~~~~~h~~~i~~v~~s 69 (69)
.|..+|.+++|+|++++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~ 61 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA 61 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEe
Confidence 478899999999999999999999999999998865 667788999999999884
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.05 E-value=3.2e-10 Score=74.37 Aligned_cols=56 Identities=7% Similarity=-0.107 Sum_probs=47.0
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccE-----Eec-cCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPV-----IVA-MHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~-----~~~-~h~~~i~~v~~s 69 (69)
.+.+|.++|.+++|+||| +|++|+.|++|++||++++..+. .+. +|...|++++||
T Consensus 570 ~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs 631 (902)
T 2oaj_A 570 AVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFV 631 (902)
T ss_dssp EECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEE
T ss_pred EEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEE
Confidence 345699999999999999 99999999999999998754432 233 899999999996
No 77
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.04 E-value=5.5e-10 Score=66.67 Aligned_cols=54 Identities=15% Similarity=0.149 Sum_probs=45.9
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC-----------ccEEeccCC------------CcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG-----------QPVIVAMHD------------APIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~-----------~~~~~~~h~------------~~i~~v~~s 69 (69)
.+..+|.+++|+|++++|++|+.|+.|++||+.+++ ....+.+|. ..|.+++|+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc
Confidence 457899999999999999999999999999998865 256778898 889999885
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.04 E-value=1.6e-09 Score=64.63 Aligned_cols=53 Identities=19% Similarity=0.148 Sum_probs=49.3
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
.|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.++.|
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 184 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW 184 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE
Confidence 37889999999999999999999999999999998888888899999999887
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.04 E-value=5.3e-10 Score=71.03 Aligned_cols=57 Identities=14% Similarity=0.137 Sum_probs=52.4
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 50 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s 106 (814)
T 3mkq_A 50 SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVH 106 (814)
T ss_dssp EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEe
Confidence 445789999999999999999999999999999999988888889999999999986
No 80
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.04 E-value=9.2e-10 Score=63.84 Aligned_cols=54 Identities=7% Similarity=0.016 Sum_probs=48.8
Q ss_pred CCCCCeEEEEECCC----CCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDD----GITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~----~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.|...|.+++|+|+ +++|++++.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 124 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFH 124 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEEC
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEEC
Confidence 36778999999999 6689999999999999999988888888999999999985
No 81
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.03 E-value=1.1e-09 Score=64.57 Aligned_cols=53 Identities=19% Similarity=0.347 Sum_probs=48.8
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEec------cC---------------CCcEEEEEeC
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVA------MH---------------DAPIKTIRLL 69 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~------~h---------------~~~i~~v~~s 69 (69)
|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+. +| ...|.+++|+
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 363 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 363 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEE
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEec
Confidence 88899999999999999999999999999999988878887 77 8999999884
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.03 E-value=8.6e-10 Score=64.24 Aligned_cols=58 Identities=19% Similarity=0.241 Sum_probs=50.4
Q ss_pred ccCCCCCCCeEEEEECCC--CCEEEEecCCCcEEEEECCCCC--ccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDD--GITVFSGGCDKQVKTWPLLSGG--QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~--~~~l~s~~~d~~v~iwd~~t~~--~~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+++ +++|++++.|+.|++||+.+++ ....+..|...|.+++|+
T Consensus 49 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 110 (379)
T 3jrp_A 49 DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA 110 (379)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred eEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeC
Confidence 345679999999999987 9999999999999999999865 556677899999999985
No 83
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.03 E-value=7.2e-10 Score=67.09 Aligned_cols=57 Identities=11% Similarity=-0.107 Sum_probs=50.4
Q ss_pred cCCCCCCCeEEEEECCC---CCEEEEecCCCcEEEEECCCCCccEE-eccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDD---GITVFSGGCDKQVKTWPLLSGGQPVI-VAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~---~~~l~s~~~d~~v~iwd~~t~~~~~~-~~~h~~~i~~v~~s 69 (69)
...+|...|.+++|+|+ +++|++++.|+.|++||+.++..+.. +.+|...|.+++|+
T Consensus 190 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s 250 (450)
T 2vdu_B 190 PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG 250 (450)
T ss_dssp CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC
T ss_pred eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC
Confidence 44568899999999999 99999999999999999998877766 56899999999985
No 84
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.02 E-value=1.6e-09 Score=61.82 Aligned_cols=56 Identities=20% Similarity=0.385 Sum_probs=49.8
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....|..+|.+++|+|++ .+++++.|+.|++||+.+++....+..|...|.++.|+
T Consensus 220 ~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~ 275 (313)
T 3odt_A 220 TYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCM 275 (313)
T ss_dssp EEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEEC
T ss_pred hhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEc
Confidence 344688999999999999 58899999999999999988888888999999999885
No 85
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.02 E-value=1.9e-09 Score=63.52 Aligned_cols=57 Identities=12% Similarity=0.167 Sum_probs=50.1
Q ss_pred hccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC------ccEEeccCCCcEEEEEeC
Q 035276 11 TNQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG------QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 11 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~------~~~~~~~h~~~i~~v~~s 69 (69)
.....+|..+|.+++|+| ++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 71 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 71 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEe
Confidence 345668999999999998 899999999999999999876 567788999999999884
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.02 E-value=3.6e-10 Score=67.93 Aligned_cols=45 Identities=22% Similarity=0.293 Sum_probs=36.8
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
..+.+|..+|.+++|+|||++|++|+.|++|++||+.........
T Consensus 358 ~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~ 402 (420)
T 4gga_A 358 AELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRR 402 (420)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC---
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchh
Confidence 345689999999999999999999999999999999765444333
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.01 E-value=2.3e-09 Score=64.01 Aligned_cols=56 Identities=4% Similarity=0.086 Sum_probs=47.6
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEecCCCcEEEEECCCCCc----cEEeccCCC------------cEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKDDG-ITVFSGGCDKQVKTWPLLSGGQ----PVIVAMHDA------------PIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iwd~~t~~~----~~~~~~h~~------------~i~~v~~s 69 (69)
...|...|.+++|+|++ +.|++++.|+.|++||+.++.. ...+.+|.. .|.+++|+
T Consensus 222 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 294 (447)
T 3dw8_B 222 MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFS 294 (447)
T ss_dssp GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEEC
T ss_pred ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEEC
Confidence 45788999999999998 9999999999999999998765 577777776 89999885
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.01 E-value=2e-09 Score=62.09 Aligned_cols=56 Identities=21% Similarity=0.230 Sum_probs=46.7
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++|+|++++|++++.|+.|++||+.+.+++..+. +...|.++.|+
T Consensus 210 ~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~ 265 (340)
T 4aow_A 210 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD-GGDIINALCFS 265 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CSSCEEEEEEC
T ss_pred EecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec-CCceEEeeecC
Confidence 445789999999999999999999999999999999877666665 44567777764
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.01 E-value=5.8e-10 Score=64.61 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=49.1
Q ss_pred CcccchhhhhhccCCCCCCCeEEEEECCCCCEE-EEecC---CCcEEEEECCCCCccEE-eccCCCcEEEEEeC
Q 035276 1 MATFGAAAVATNQNPNKSIEVLCSTLKDDGITV-FSGGC---DKQVKTWPLLSGGQPVI-VAMHDAPIKTIRLL 69 (69)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~---d~~v~iwd~~t~~~~~~-~~~h~~~i~~v~~s 69 (69)
|+....+-.......+|..+|.+++|+|++..+ ++++. |+.|++||+.+++.... ..+|..+|.+++|+
T Consensus 1 m~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~ 74 (357)
T 3i2n_A 1 MSAFEKPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFG 74 (357)
T ss_dssp ----CCCCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECT
T ss_pred CCccChhHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEc
Confidence 444444444444556799999999999999765 45655 99999999998665433 34799999999885
No 90
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.00 E-value=8.2e-10 Score=63.86 Aligned_cols=56 Identities=4% Similarity=-0.028 Sum_probs=48.6
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC---ccEEeccCCCcEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG---QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~---~~~~~~~h~~~i~~v~~s 69 (69)
..+|...|.+++|+|++++|++++.|+.|++||+.++. ....+.+|...|.+++|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~ 65 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEEC
Confidence 45899999999999999999999999999999998865 245556899999999884
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.00 E-value=2.7e-09 Score=62.80 Aligned_cols=52 Identities=21% Similarity=0.481 Sum_probs=46.5
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
|..+|.+++|+|++++|++++.|+.|++|| .++..+..+.+|...|.+++|+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~ 158 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWN 158 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEEC
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEEC
Confidence 677999999999999999999999999999 5567778888999999999985
No 92
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.00 E-value=1.7e-09 Score=62.50 Aligned_cols=51 Identities=14% Similarity=0.198 Sum_probs=45.4
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccC-CCcEEEEE
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMH-DAPIKTIR 67 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h-~~~i~~v~ 67 (69)
|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+.+| ..+|.+++
T Consensus 250 ~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA 301 (342)
T ss_dssp SCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE
T ss_pred cceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec
Confidence 3458999999999999999999999999999998888888888 89888764
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.00 E-value=3.1e-10 Score=72.90 Aligned_cols=57 Identities=12% Similarity=0.098 Sum_probs=47.7
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCC--CCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLS--GGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t--~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|.++|.+++|+|++++|++|+.|+.|++||+.. +.....+.+|..+|.+++|+
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s 62 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWA 62 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEec
Confidence 3568999999999999999999999999999999973 34556788999999999985
No 94
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.99 E-value=3.7e-09 Score=60.70 Aligned_cols=57 Identities=14% Similarity=0.152 Sum_probs=50.8
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....|...+.+++|+|+++++++++.|+.|++||+.+++....+..|...|.+++|+
T Consensus 136 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 136 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence 344678889999999999999999999999999999987778888899999999885
No 95
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.99 E-value=1.8e-09 Score=63.83 Aligned_cols=55 Identities=5% Similarity=-0.012 Sum_probs=48.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCC----CCccEEeccCCCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLS----GGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t----~~~~~~~~~h~~~i~~v~~s 69 (69)
..|..+|.+++|+|++++|++++.|+.|++||+.+ .+.+..+.+|...|.+++|+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 122 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFN 122 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEEC
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEc
Confidence 35788999999999999999999999999999987 23567788999999999985
No 96
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.99 E-value=1.3e-09 Score=64.88 Aligned_cols=53 Identities=6% Similarity=-0.017 Sum_probs=42.8
Q ss_pred CCCCCeEEEEECCCCCEEEE--ecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFS--GGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s--~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+...+..++|+|||+++++ ++.|++|++||+++++++..+. |...|.+++|+
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fs 185 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFS 185 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEEC
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEc
Confidence 34455888999999998764 4578999999999987766664 77889999986
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.98 E-value=2.3e-09 Score=64.19 Aligned_cols=52 Identities=12% Similarity=0.152 Sum_probs=46.1
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEec-cCCCcEEEEEe
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVA-MHDAPIKTIRL 68 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~-~h~~~i~~v~~ 68 (69)
|..+|.+++|+|++++|++++.|+.|++||+.+++++..+. .|..+|.++.|
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 78899999999999999999999999999999977767664 78888998865
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.96 E-value=1.7e-09 Score=64.72 Aligned_cols=54 Identities=15% Similarity=0.295 Sum_probs=45.8
Q ss_pred CCCCCCeEEEEECC-CCCEEEEecCCCcEEEEECCC---CCc---cEEeccCCCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKD-DGITVFSGGCDKQVKTWPLLS---GGQ---PVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iwd~~t---~~~---~~~~~~h~~~i~~v~~s 69 (69)
.+|..+|.+++|+| ++++|++|+.|++|++||+.+ +.. ...+ +|...|.+++|+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~ 120 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMI 120 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEEC
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEe
Confidence 67899999999999 999999999999999999976 432 2233 599999999985
No 99
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.95 E-value=6.9e-09 Score=59.33 Aligned_cols=54 Identities=11% Similarity=0.131 Sum_probs=47.1
Q ss_pred CCCCCeEEEEECCCCCEEEEe--cCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFSG--GCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~--~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+...+..+.|+|+++.++++ +.|+.|++||+.+++++..+.+|...|.+++|+
T Consensus 238 ~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~s 293 (318)
T 4ggc_A 238 DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMS 293 (318)
T ss_dssp ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 356678899999999988664 479999999999998889999999999999986
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.94 E-value=4.1e-09 Score=63.78 Aligned_cols=55 Identities=13% Similarity=0.057 Sum_probs=46.5
Q ss_pred CCCCCCeEEEEECCCCCEE-EEecCCCcEEEEECC--CCCccEEec--cCCCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKDDGITV-FSGGCDKQVKTWPLL--SGGQPVIVA--MHDAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~~~l-~s~~~d~~v~iwd~~--t~~~~~~~~--~h~~~i~~v~~s 69 (69)
++|...|.+++|+|++++| ++++.|+.|++||+. +++.+..+. .|...|.+++|+
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 158 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA 158 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc
Confidence 4677789999999999996 899999999999998 777776665 567889999885
No 101
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.93 E-value=6.5e-09 Score=61.31 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=47.5
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+...|.+++|+|++++|++++.|+.|++||+. ++.+..+.+|...|.+++|+
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFN 213 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEEC
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEEC
Confidence 456789999999999999999999999999994 57778888999999999985
No 102
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.93 E-value=4.4e-09 Score=61.95 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=51.2
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
....|..+|.+++|+|++++|++++.|+.|++||+.+++....+..|...|.++.|+
T Consensus 242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 298 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWV 298 (425)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEE
T ss_pred eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEEC
Confidence 344788899999999999999999999999999999988888888899999999874
No 103
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.93 E-value=1e-08 Score=58.82 Aligned_cols=54 Identities=17% Similarity=0.253 Sum_probs=46.9
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC--ccEEeccCCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG--QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~--~~~~~~~h~~~i~~v~~s 69 (69)
.|..+|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...|.++.|+
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~ 150 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS 150 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEEC
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEEC
Confidence 688899999999999999999999999999998866 345677899999999875
No 104
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.92 E-value=9.9e-09 Score=65.06 Aligned_cols=55 Identities=24% Similarity=0.286 Sum_probs=49.6
Q ss_pred CCCCCCeEEEEECCCC--CEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKDDG--ITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~--~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+|...|.+++|+|++ ..+++++.|+.|++||+.+++....+.+|...|.+++|+
T Consensus 514 ~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s 570 (694)
T 3dm0_A 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS 570 (694)
T ss_dssp TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe
Confidence 4688889999999987 579999999999999999887778889999999999985
No 105
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.90 E-value=6.5e-09 Score=60.18 Aligned_cols=53 Identities=19% Similarity=0.241 Sum_probs=47.8
Q ss_pred CCCCCeEEEEECCC---CCEEEEecCCCcEEEEECCCCC-ccEEeccCCCcEEEEEe
Q 035276 16 NKSIEVLCSTLKDD---GITVFSGGCDKQVKTWPLLSGG-QPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 16 ~~~~~v~~~~~s~~---~~~l~s~~~d~~v~iwd~~t~~-~~~~~~~h~~~i~~v~~ 68 (69)
.|..+|.+++|+|+ +++|++++.|+.|++||+.+++ ....+.+|...|.++.|
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 119 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDG 119 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEee
Confidence 57889999999998 6999999999999999999877 67888899999999865
No 106
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.89 E-value=3.7e-09 Score=66.22 Aligned_cols=50 Identities=6% Similarity=-0.010 Sum_probs=46.1
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 20 EVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.|.+++|+|+++.+++++.|++|++||+.++.++..+.+|...|.+++||
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVS 406 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECC
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeC
Confidence 47889999999999999999999999999988878888999999999986
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.89 E-value=5.4e-09 Score=67.23 Aligned_cols=58 Identities=19% Similarity=0.241 Sum_probs=50.8
Q ss_pred ccCCCCCCCeEEEEECCC--CCEEEEecCCCcEEEEECCCCC--ccEEeccCCCcEEEEEeC
Q 035276 12 NQNPNKSIEVLCSTLKDD--GITVFSGGCDKQVKTWPLLSGG--QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~--~~~l~s~~~d~~v~iwd~~t~~--~~~~~~~h~~~i~~v~~s 69 (69)
....+|..+|.+++|+|+ +++|++++.|+.|++||+.++. ....+.+|...|.+++|+
T Consensus 47 ~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~s 108 (753)
T 3jro_A 47 DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA 108 (753)
T ss_dssp EEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred eeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEEC
Confidence 345689999999999998 9999999999999999998865 456678899999999985
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.89 E-value=9e-09 Score=60.34 Aligned_cols=56 Identities=9% Similarity=-0.018 Sum_probs=45.4
Q ss_pred CCCCCCCeEEEEECC--CCCEEEEecCCCcEEEEECCCCCccEEe-ccCCCcEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKD--DGITVFSGGCDKQVKTWPLLSGGQPVIV-AMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~--~~~~l~s~~~d~~v~iwd~~t~~~~~~~-~~h~~~i~~v~~s 69 (69)
..+|..+|.+++|+| +++++++++.|++|++||+.++++.... ..|...|.+++|+
T Consensus 121 ~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~ 179 (343)
T 3lrv_A 121 EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLH 179 (343)
T ss_dssp ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEEC
T ss_pred ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEEC
Confidence 346678899999999 9999999999999999999987775544 3456678888875
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.89 E-value=1.6e-08 Score=61.04 Aligned_cols=55 Identities=20% Similarity=0.260 Sum_probs=48.2
Q ss_pred CCCCCCeEEEEECCCCC-EEEEecCCCcEEEEECCC-CCccEEeccCCCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKDDGI-TVFSGGCDKQVKTWPLLS-GGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~~-~l~s~~~d~~v~iwd~~t-~~~~~~~~~h~~~i~~v~~s 69 (69)
..|..+|.+++|+|+++ .+++++.|+.|++||+.. ...+..+..|...|.+++|+
T Consensus 274 ~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s 330 (430)
T 2xyi_A 274 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 330 (430)
T ss_dssp ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEEC
T ss_pred ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEEC
Confidence 47888999999999987 688999999999999987 44567888899999999985
No 110
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.87 E-value=1e-08 Score=61.71 Aligned_cols=55 Identities=20% Similarity=0.358 Sum_probs=45.4
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|..+|.+++| +++.|++|+.|+.|++||+.+++.+..+.+|...|.++.|+
T Consensus 168 ~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 222 (435)
T 1p22_A 168 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 222 (435)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC
T ss_pred EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc
Confidence 34578888888888 67888999999999999998887777888888888888764
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.87 E-value=1.9e-08 Score=60.70 Aligned_cols=57 Identities=12% Similarity=0.038 Sum_probs=49.1
Q ss_pred cCCCCCCCeEEEEECC-CCCEEEEecCCCcEEEEECCCC---CccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKD-DGITVFSGGCDKQVKTWPLLSG---GQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iwd~~t~---~~~~~~~~h~~~i~~v~~s 69 (69)
....|...|.+++|+| ++..+++++.|+.|++||+.++ .....+..|...|.+++|+
T Consensus 226 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 286 (430)
T 2xyi_A 226 IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFN 286 (430)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEEC
T ss_pred eecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeC
Confidence 4457899999999999 6788999999999999999876 3556777899999999985
No 112
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.85 E-value=2.4e-08 Score=62.52 Aligned_cols=55 Identities=11% Similarity=0.069 Sum_probs=45.5
Q ss_pred CCCCCCeEEEEECCC------CCEEEEecCCCcEEEEECCCCCc-----------cEEeccCCCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKDD------GITVFSGGCDKQVKTWPLLSGGQ-----------PVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~------~~~l~s~~~d~~v~iwd~~t~~~-----------~~~~~~h~~~i~~v~~s 69 (69)
..|.+.|.+++|+|+ +.+|++++.|++|++||+.++.+ ...+.+|...|.+++|+
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s 275 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFL 275 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEES
T ss_pred EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEec
Confidence 346778999999997 57999999999999999987542 23567899999999985
No 113
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.84 E-value=3.2e-09 Score=64.32 Aligned_cols=53 Identities=11% Similarity=0.086 Sum_probs=37.5
Q ss_pred CCCCCeEEEEECC---CCCEEEEecCCCcEEEEECCCCCccEEeccCCC---cEEEEEe
Q 035276 16 NKSIEVLCSTLKD---DGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDA---PIKTIRL 68 (69)
Q Consensus 16 ~~~~~v~~~~~s~---~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~---~i~~v~~ 68 (69)
.|...+..++|++ +++.|++++.|++|++||+.+|+++..+.+|.. .+.+++|
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 3444455556666 557788999999999999999998888876543 3444444
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.84 E-value=3e-08 Score=58.16 Aligned_cols=37 Identities=19% Similarity=0.399 Sum_probs=33.7
Q ss_pred CCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC
Q 035276 15 PNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG 51 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~ 51 (69)
..|..+|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 5788999999999999999999999999999997654
No 115
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.84 E-value=2e-08 Score=59.61 Aligned_cols=56 Identities=18% Similarity=0.209 Sum_probs=46.3
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEecc---CCCcEEEEEe
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAM---HDAPIKTIRL 68 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~---h~~~i~~v~~ 68 (69)
...+|..+|.+++|+|+++.|++++.|+.|++||+.+++.+..+.. |...|.++.|
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEE
Confidence 3457899999999999999999999999999999999877776653 5566666654
No 116
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.77 E-value=1.9e-08 Score=60.72 Aligned_cols=52 Identities=13% Similarity=0.061 Sum_probs=45.3
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
+...+.+++|+|++++|++|+.|+.|++||+.. +++..+.+|...|.+++|+
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~ 259 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALN 259 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEEC
T ss_pred CCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeec
Confidence 344577899999999999999999999999875 6677788999999999985
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.77 E-value=1.4e-08 Score=64.79 Aligned_cols=54 Identities=7% Similarity=0.102 Sum_probs=44.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCcc---EEe-ccCCCcEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQP---VIV-AMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~---~~~-~~h~~~i~~v~~s 69 (69)
..+|...|.+++|+||| +++++.|+++++||+..+... ..+ .+|...|.+++|+
T Consensus 178 ~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 178 DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp CTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred cccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 36788899999999999 888899999999999886532 345 4788899999885
No 118
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.76 E-value=1.6e-08 Score=60.91 Aligned_cols=56 Identities=18% Similarity=0.233 Sum_probs=46.8
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+|...+.. ++.+++++|++++.|+.|++||+.+++.+..+.+|...|.++.|+
T Consensus 113 ~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 168 (445)
T 2ovr_B 113 VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR 168 (445)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE
T ss_pred EecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec
Confidence 34578877644 355679999999999999999999988888899999999998873
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.71 E-value=7.4e-08 Score=57.99 Aligned_cols=55 Identities=18% Similarity=0.303 Sum_probs=46.3
Q ss_pred ccCCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 12 NQNPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 12 ~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
....+|..+|.+++|+ ++.+++++.|+.|++||+.+++.+..+.+|...|.++.|
T Consensus 153 ~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 207 (445)
T 2ovr_B 153 RTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 207 (445)
T ss_dssp EECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEe
Confidence 3456788899999997 568999999999999999888777888889998988876
No 120
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.70 E-value=9e-08 Score=57.63 Aligned_cols=51 Identities=22% Similarity=0.309 Sum_probs=45.0
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
.|...|.+++| +++++++|+.|+.|++||+.+++....+.+|...|.+++|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 181 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 181 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE
Confidence 45667887777 7899999999999999999998888889999999999886
No 121
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.69 E-value=5.1e-08 Score=59.57 Aligned_cols=53 Identities=8% Similarity=0.077 Sum_probs=41.5
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccC-------CCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMH-------DAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h-------~~~i~~v~~s 69 (69)
+|...|.+++|+|+|++|++|+.|++|++||+. +.....+..| ...|.++.|+
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~ 249 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWI 249 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEE
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEe
Confidence 477889999999999999999999999999998 4444444333 2367777773
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.64 E-value=9.8e-08 Score=57.89 Aligned_cols=40 Identities=10% Similarity=0.059 Sum_probs=32.6
Q ss_pred CCEEEEecCCCcEEEEECCCCCccEEeccCCCcEE-EEEeC
Q 035276 30 GITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIK-TIRLL 69 (69)
Q Consensus 30 ~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~-~v~~s 69 (69)
+..+++++.|++|++||+.+++++..+.+|...+. .++||
T Consensus 295 g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafS 335 (356)
T 2w18_A 295 DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWS 335 (356)
T ss_dssp TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEEC
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEEC
Confidence 55789999999999999999998899988887654 57886
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.61 E-value=8.9e-08 Score=57.08 Aligned_cols=55 Identities=13% Similarity=-0.065 Sum_probs=48.6
Q ss_pred CCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+|...+.+++|+++++.+++++.|+.|++||+.+++....+..|...+.+++|+
T Consensus 166 ~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 220 (433)
T 3bws_A 166 KKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYD 220 (433)
T ss_dssp HTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEE
T ss_pred cccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEc
Confidence 3677789999999999999999999999999999987777788888889888874
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.58 E-value=2.5e-07 Score=55.95 Aligned_cols=55 Identities=11% Similarity=0.013 Sum_probs=45.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCC---cEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDK---QVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~---~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
+..|...+.+++|+|||++|++++.|+ .|++||+.++++ ..+..|...+.+++||
T Consensus 174 l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-~~l~~~~~~~~~~~~s 231 (415)
T 2hqs_A 174 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFS 231 (415)
T ss_dssp EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEEC
T ss_pred EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-EEeecCCCcccCEEEc
Confidence 345778899999999999999998875 999999998655 4566788888888886
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.49 E-value=3.1e-07 Score=54.35 Aligned_cols=34 Identities=9% Similarity=0.126 Sum_probs=32.2
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCC
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSG 50 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~ 50 (69)
|..+|.+++|+|++++|++++.|++|++||+..+
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 8899999999999999999999999999999764
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.46 E-value=8.9e-07 Score=52.11 Aligned_cols=50 Identities=10% Similarity=0.114 Sum_probs=40.7
Q ss_pred CCeEEEEECCCCCEE-EEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 19 IEVLCSTLKDDGITV-FSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l-~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
..+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+. .+.+++|+
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~s 82 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVS 82 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEEC
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEEC
Confidence 347899999999987 677799999999999977766665444 78888875
No 127
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.38 E-value=1.4e-06 Score=57.72 Aligned_cols=55 Identities=16% Similarity=0.134 Sum_probs=46.7
Q ss_pred CCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
..|...+..++|+|||++|++++.++.|++||+.+++....+.+|...+..++||
T Consensus 375 ~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 375 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS 429 (1045)
T ss_dssp CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC
T ss_pred cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEEC
Confidence 3667789999999999999999999999999999977655566788888888775
No 128
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.36 E-value=1.3e-06 Score=52.30 Aligned_cols=41 Identities=7% Similarity=-0.092 Sum_probs=35.2
Q ss_pred CCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 29 DGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 29 ~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
++.++++|+.|++|++||+.++.+...+.+|..+|.+++||
T Consensus 328 ~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafs 368 (393)
T 4gq1_A 328 MDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWH 368 (393)
T ss_dssp TTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEEC
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEc
Confidence 34466788899999999999988887778899999999996
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.30 E-value=3.6e-06 Score=50.92 Aligned_cols=49 Identities=10% Similarity=-0.018 Sum_probs=43.2
Q ss_pred CeEEEEECCCCCEEEEecCCC---cEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 20 EVLCSTLKDDGITVFSGGCDK---QVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~---~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+..++|+|||+.|+.++.++ .|.+||+.. +....+..|...|++++|+
T Consensus 355 ~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g-~~~~~l~~~~~~v~~~~~~ 406 (415)
T 2hqs_A 355 LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG-RFKARLPATDGQVKFPAWS 406 (415)
T ss_dssp SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS-CCEEECCCSSSEEEEEEEC
T ss_pred CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC-CcEEEeeCCCCCCcCCccc
Confidence 788999999999998888777 799999874 6778888999999999996
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.29 E-value=1.4e-06 Score=48.88 Aligned_cols=54 Identities=6% Similarity=-0.087 Sum_probs=40.5
Q ss_pred CCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCC-CCccEEeccC-CCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLS-GGQPVIVAMH-DAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t-~~~~~~~~~h-~~~i~~v~~s 69 (69)
..|...+.+++|+|++++|++++ ++.|.+||+.+ ++.......| ...+.+++|+
T Consensus 38 ~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 38 WQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp EEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred ccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 34677899999999999998876 77999999988 6655444444 3556666664
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.16 E-value=9.1e-06 Score=51.02 Aligned_cols=48 Identities=13% Similarity=0.108 Sum_probs=39.8
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEC--CCCCccEEeccCCCcEEEEEeC
Q 035276 21 VLCSTLKDDGITVFSGGCDKQVKTWPL--LSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~d~~v~iwd~--~t~~~~~~~~~h~~~i~~v~~s 69 (69)
+..++|+|||++|++++.|++|.+||+ .+++++..+. +...+..++||
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~s 230 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESS 230 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEEC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeC
Confidence 778999999999999999999999999 7776666665 44556777775
No 132
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.15 E-value=1.5e-05 Score=46.89 Aligned_cols=51 Identities=20% Similarity=0.154 Sum_probs=39.4
Q ss_pred CCCeEEEEECCCCCEE-EEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 18 SIEVLCSTLKDDGITV-FSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l-~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+.+++|+|+++.| ++++.|+.|++||+.+++....+..| ..+..+.|+
T Consensus 115 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~ 166 (391)
T 1l0q_A 115 GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVT 166 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEEC
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEEC
Confidence 4467899999999987 68888999999999987666666544 345666664
No 133
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.13 E-value=1.4e-05 Score=47.55 Aligned_cols=54 Identities=6% Similarity=-0.216 Sum_probs=41.3
Q ss_pred CCCCCCeEEEEECCCCCEEE-EecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 15 PNKSIEVLCSTLKDDGITVF-SGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~~~l~-s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
..|...+.+++|+|+++.++ +++.|+.|++||+.+++....+..+ ..+.+++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~ 262 (433)
T 3bws_A 208 DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLS 262 (433)
T ss_dssp ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEEC
T ss_pred cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEc
Confidence 35777899999999999885 5558999999999987665555543 446777664
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.13 E-value=1.5e-05 Score=44.55 Aligned_cols=57 Identities=9% Similarity=-0.027 Sum_probs=44.2
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEec-CCCcEEEEECC-CCCccEEeccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGG-CDKQVKTWPLL-SGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~-~d~~v~iwd~~-t~~~~~~~~~h~~~i~~v~~s 69 (69)
....+...+..++|+|+++.|+.++ .++.+++|++. .+.....+..|...+..+.|+
T Consensus 167 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s 225 (297)
T 2ojh_A 167 RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPS 225 (297)
T ss_dssp ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEEC
T ss_pred EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEEC
Confidence 3445677889999999999887655 58899999986 445667777787778888775
No 135
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.09 E-value=1.9e-06 Score=53.60 Aligned_cols=51 Identities=14% Similarity=0.111 Sum_probs=39.5
Q ss_pred CCCeEEEEECCCCCEEEEecC-CCcEEEEECCCCCccEEeccCC-CcEEEEEeC
Q 035276 18 SIEVLCSTLKDDGITVFSGGC-DKQVKTWPLLSGGQPVIVAMHD-APIKTIRLL 69 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~-d~~v~iwd~~t~~~~~~~~~h~-~~i~~v~~s 69 (69)
..+|.+++|+|||++|+.++. |+++++|++.++ ....+..|. ..+..+.||
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g-~~~~lt~~~~~~~~~~~~s 73 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG-ETVKLNREPINSVLDPHYG 73 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT-EEEECCSSCCSEECEECTT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCC-CcEeeecccccccccccCC
Confidence 457999999999999998876 999999998654 445555554 577777765
No 136
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.08 E-value=2e-06 Score=53.47 Aligned_cols=52 Identities=4% Similarity=-0.086 Sum_probs=40.4
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEecCCC--cEEEEECCCCCccEEeccCCCcEEE
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGGCDK--QVKTWPLLSGGQPVIVAMHDAPIKT 65 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~--~v~iwd~~t~~~~~~~~~h~~~i~~ 65 (69)
.+..+...+..++|+|||+.|+++..++ .|.+||+.+++.. .+.+|...+..
T Consensus 189 ~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~ 242 (582)
T 3o4h_A 189 VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSS 242 (582)
T ss_dssp EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHH
T ss_pred EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhh
Confidence 3456777789999999999999888888 8999999987655 55666555443
No 137
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.07 E-value=1e-05 Score=48.19 Aligned_cols=47 Identities=6% Similarity=0.034 Sum_probs=38.6
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCC--CccEEeccCCCcEEEEEe
Q 035276 21 VLCSTLKDDGITVFSGGCDKQVKTWPLLSG--GQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~--~~~~~~~~h~~~i~~v~~ 68 (69)
+..++|+|||++|++++. +.|.+||+.++ +.+..+..+....+.+.+
T Consensus 307 p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQF 355 (361)
T ss_dssp CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEE
T ss_pred eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEe
Confidence 788999999999998887 99999999998 666666556666666665
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.07 E-value=7.6e-06 Score=51.94 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=33.6
Q ss_pred CCCeEEEEECCCCCEEEEecC-CC-----cEEEEECCCCCccEEecc
Q 035276 18 SIEVLCSTLKDDGITVFSGGC-DK-----QVKTWPLLSGGQPVIVAM 58 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~-d~-----~v~iwd~~t~~~~~~~~~ 58 (69)
...+..++|+|||++|++++. |+ .|.+||+.+++....+..
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~ 82 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDS 82 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECG
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccch
Confidence 445889999999999999888 88 899999998766555443
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.95 E-value=1.7e-05 Score=52.58 Aligned_cols=53 Identities=8% Similarity=-0.026 Sum_probs=43.0
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCC----------cEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDK----------QVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~----------~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.|...+..++|+|||++|+.++.++ .|++||+.+++ ...+..|...+..+.|+
T Consensus 418 ~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~s 480 (1045)
T 1k32_A 418 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFD 480 (1045)
T ss_dssp CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEEC
T ss_pred CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEc
Confidence 5777788999999999998876643 89999998864 66677788778877775
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.88 E-value=1.8e-05 Score=50.28 Aligned_cols=48 Identities=8% Similarity=0.011 Sum_probs=39.6
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCC--ccEEeccCCCcEEEEEeC
Q 035276 21 VLCSTLKDDGITVFSGGCDKQVKTWPLLSGG--QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~--~~~~~~~h~~~i~~v~~s 69 (69)
+..++|+|||++|++++. +.|.+||+.++. ....+..|...+..++||
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~S 160 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLS 160 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEEC
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCC
Confidence 678899999999988876 899999998862 455666788888888886
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.85 E-value=2.4e-05 Score=49.17 Aligned_cols=57 Identities=5% Similarity=-0.008 Sum_probs=43.4
Q ss_pred cCCCCCCCeEEEEECCCCCEEEEec-------CCCcEEEEECCCCCcc-EEe--------ccCCCcEEEEEeC
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFSGG-------CDKQVKTWPLLSGGQP-VIV--------AMHDAPIKTIRLL 69 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s~~-------~d~~v~iwd~~t~~~~-~~~--------~~h~~~i~~v~~s 69 (69)
.+..|...++.++|+||+++|++++ .+++|.+||+.++++. ..+ ..+...+..++|+
T Consensus 415 ~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 487 (543)
T 1nir_A 415 ELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYN 487 (543)
T ss_dssp EEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEEC
T ss_pred EEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCC
Confidence 3445667778899999999999987 2779999999998776 333 3556777777765
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.84 E-value=5.2e-05 Score=43.62 Aligned_cols=52 Identities=8% Similarity=-0.045 Sum_probs=36.8
Q ss_pred CCCCeEEEEECCCCCEEEEecC-CCcEEEEECCCCCc-cEEeccCCCcEEEEEeC
Q 035276 17 KSIEVLCSTLKDDGITVFSGGC-DKQVKTWPLLSGGQ-PVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~-d~~v~iwd~~t~~~-~~~~~~h~~~i~~v~~s 69 (69)
+...+ .++|+|++++++.++. ++.|.+||+.+++. ...+..+..+..+++|+
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s 92 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDIT 92 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEEC
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEEC
Confidence 34455 8999999997766554 88999999998776 55555555554435553
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.81 E-value=6.2e-05 Score=47.63 Aligned_cols=48 Identities=8% Similarity=0.063 Sum_probs=36.7
Q ss_pred EEEEECCCCCEEEEecCCC----------------------------------cEEEEECCCCCccEEeccC------CC
Q 035276 22 LCSTLKDDGITVFSGGCDK----------------------------------QVKTWPLLSGGQPVIVAMH------DA 61 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~~d~----------------------------------~v~iwd~~t~~~~~~~~~h------~~ 61 (69)
..++|+|||++|+.++.|. .|.+||+.+++....+..+ ..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 6899999999998877543 7999999887655555543 56
Q ss_pred cEEEEEeC
Q 035276 62 PIKTIRLL 69 (69)
Q Consensus 62 ~i~~v~~s 69 (69)
.+..++||
T Consensus 256 ~~~~~~~S 263 (723)
T 1xfd_A 256 YITMVKWA 263 (723)
T ss_dssp EEEEEEES
T ss_pred eeEEEEEe
Confidence 67778775
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.80 E-value=5e-05 Score=43.42 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=33.6
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEecc
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAM 58 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~ 58 (69)
..+..++|+||+++|++++.++.|++||+.+++.+..+..
T Consensus 280 ~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 280 HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 3467899999999999999999999999999877666543
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.78 E-value=1.9e-05 Score=49.93 Aligned_cols=49 Identities=6% Similarity=-0.087 Sum_probs=35.1
Q ss_pred CeEEEEECCCCCEEEEecCC---------CcEEEEECCCCCccEEe---ccCCCcEEEEEeC
Q 035276 20 EVLCSTLKDDGITVFSGGCD---------KQVKTWPLLSGGQPVIV---AMHDAPIKTIRLL 69 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d---------~~v~iwd~~t~~~~~~~---~~h~~~i~~v~~s 69 (69)
.+.+++|+|||++|++++.+ +.+.+||+.+++. ..+ .+|...+..++||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~S 122 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWG 122 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBC
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEEC
Confidence 48899999999999988764 6788999998764 333 2344445555554
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.75 E-value=7.1e-05 Score=42.90 Aligned_cols=52 Identities=13% Similarity=0.088 Sum_probs=36.0
Q ss_pred CCCCeEEEEECCCCCEEEEecCC-CcEEEEECC--CCCc--cEEeccCCCcEEEEEeC
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCD-KQVKTWPLL--SGGQ--PVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d-~~v~iwd~~--t~~~--~~~~~~h~~~i~~v~~s 69 (69)
+...+..++|+|++++|++++.+ +.|++||+. ++.. +..+..+. .+..++|+
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s 92 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTD 92 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEEC
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEc
Confidence 45567789999999999888776 899999997 4432 22333333 55666653
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.66 E-value=0.00019 Score=41.02 Aligned_cols=49 Identities=6% Similarity=0.120 Sum_probs=35.6
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 18 SIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
...+..++|+||+++++++ ++.|.+||+.+++.+..+.. ...+.+++|+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s 288 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVS 288 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEEC
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEEC
Confidence 3456789999999999888 78999999988765555442 2344555553
No 148
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.64 E-value=0.00013 Score=42.79 Aligned_cols=47 Identities=11% Similarity=0.049 Sum_probs=34.0
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcE
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPI 63 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i 63 (69)
+...+..+.|+|||+.|+....++.+.+||+.+++.......+...+
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~ 125 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWV 125 (388)
T ss_dssp SCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEE
T ss_pred CCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcc
Confidence 33334456899999999999999999999999876544444344333
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.63 E-value=9.5e-05 Score=42.67 Aligned_cols=52 Identities=12% Similarity=0.080 Sum_probs=38.3
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEecc----CCCcEEEEEe
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAM----HDAPIKTIRL 68 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~----h~~~i~~v~~ 68 (69)
+...+..++|+|++++|+.+..++.+.+||+.+++....+.. +...+..++|
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEE
T ss_pred CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEE
Confidence 344467789999999999999999999999998766554432 3444555554
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.62 E-value=0.00019 Score=41.74 Aligned_cols=51 Identities=12% Similarity=0.110 Sum_probs=35.3
Q ss_pred CCeEEEEECCCCCEEE-EecCCCcEEEEECCCCC---ccEEeccCCCcEEEEEeC
Q 035276 19 IEVLCSTLKDDGITVF-SGGCDKQVKTWPLLSGG---QPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~-s~~~d~~v~iwd~~t~~---~~~~~~~h~~~i~~v~~s 69 (69)
..+..++|+|||++|+ +...++.|.+||+.... .+..+..+...+..++|+
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~s 294 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLD 294 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEEC
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEEC
Confidence 3477899999999884 55568999999997322 233444555556677664
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.58 E-value=0.00048 Score=39.54 Aligned_cols=51 Identities=14% Similarity=0.020 Sum_probs=35.8
Q ss_pred CCCeEEEEECCCCCEEEE-ecCCCcEEEEECCCCCc---cEEeccCCCcEEEEEeC
Q 035276 18 SIEVLCSTLKDDGITVFS-GGCDKQVKTWPLLSGGQ---PVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s-~~~d~~v~iwd~~t~~~---~~~~~~h~~~i~~v~~s 69 (69)
...+..++|+|||++++. +..++.|.+||+.+++. +..+..+ ..+..++|+
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~s 229 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVS 229 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEEC
T ss_pred CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEEC
Confidence 345788999999997654 55789999999998776 5555433 344455553
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.58 E-value=8.7e-05 Score=46.96 Aligned_cols=49 Identities=8% Similarity=-0.006 Sum_probs=36.9
Q ss_pred eEEEEECCCCCEEEEec---------------------------------CCCcEEEEECCCCCccEEe--ccCCCcEEE
Q 035276 21 VLCSTLKDDGITVFSGG---------------------------------CDKQVKTWPLLSGGQPVIV--AMHDAPIKT 65 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~---------------------------------~d~~v~iwd~~t~~~~~~~--~~h~~~i~~ 65 (69)
+..++|+|||++|++++ .+..|.+||+.+++..... ..|...+..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 46789999999999887 4568999999886543222 246677888
Q ss_pred EEeC
Q 035276 66 IRLL 69 (69)
Q Consensus 66 v~~s 69 (69)
++||
T Consensus 263 ~~~s 266 (706)
T 2z3z_A 263 LSWS 266 (706)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8885
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.53 E-value=0.00024 Score=41.54 Aligned_cols=51 Identities=8% Similarity=0.057 Sum_probs=34.8
Q ss_pred CCeEEEEECCCCCEEEEec-CCCcEEEEEC--CCCCccEEe-ccCCCcEEEEEeC
Q 035276 19 IEVLCSTLKDDGITVFSGG-CDKQVKTWPL--LSGGQPVIV-AMHDAPIKTIRLL 69 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~-~d~~v~iwd~--~t~~~~~~~-~~h~~~i~~v~~s 69 (69)
..+..++|+|||++|++++ .++.|.+|++ ++++..... ..+...+.|+.|.
T Consensus 306 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 306 IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 3567899999999988877 6789999654 455432222 2244567888873
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.49 E-value=0.00072 Score=39.51 Aligned_cols=51 Identities=10% Similarity=0.016 Sum_probs=33.5
Q ss_pred CCCeEEEEECCCCCEEEEecC--CCcEEEEECC--CCCc--cEEeccCCCcEEEEEeC
Q 035276 18 SIEVLCSTLKDDGITVFSGGC--DKQVKTWPLL--SGGQ--PVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~--d~~v~iwd~~--t~~~--~~~~~~h~~~i~~v~~s 69 (69)
...+..++|+|||++|+.+.. ++.|.+|++. ++.. +..+.. ...+..++|+
T Consensus 258 ~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~s 314 (361)
T 3scy_A 258 AQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIIT 314 (361)
T ss_dssp CCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEEC
T ss_pred CCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEEC
Confidence 344678999999999977665 4899999996 3331 222332 3445566664
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.49 E-value=0.00015 Score=41.68 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=32.0
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEec
Q 035276 20 EVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~ 57 (69)
.+..++|+|++++|++++.++.|.+||+.+++.+..+.
T Consensus 296 ~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 296 TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred CccceEECCCCCEEEEecCCCeEEEEeccccceeeeee
Confidence 45689999999999888889999999999877666554
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.48 E-value=0.0005 Score=39.49 Aligned_cols=48 Identities=6% Similarity=-0.018 Sum_probs=35.2
Q ss_pred CCeEEEEECC-CCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 19 IEVLCSTLKD-DGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 19 ~~v~~~~~s~-~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
..+..++|+| |+++++++ ++.|.+||+.+++....+.. ...+..++|+
T Consensus 255 ~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s 303 (349)
T 1jmx_B 255 ELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFD 303 (349)
T ss_dssp SCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEEC
T ss_pred CcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEEC
Confidence 3567889999 99999888 88999999998765555432 2334556654
No 157
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.47 E-value=0.00035 Score=39.98 Aligned_cols=30 Identities=7% Similarity=0.096 Sum_probs=25.0
Q ss_pred CCeEEEEECCCCCEEE-EecCCCcEEEEECC
Q 035276 19 IEVLCSTLKDDGITVF-SGGCDKQVKTWPLL 48 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~-s~~~d~~v~iwd~~ 48 (69)
..+..++|+|++++|+ ++..++.|.+||+.
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 3466799999999886 55578999999997
No 158
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.47 E-value=0.0011 Score=38.33 Aligned_cols=53 Identities=9% Similarity=0.033 Sum_probs=38.5
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
+...+..++|+++++.++++..++.|.+||..+++.......+...+..++|+
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~ 95 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIH 95 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEEC
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEEC
Confidence 44456789999999977788889999999998765433332455667777653
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.47 E-value=8.8e-05 Score=43.52 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=32.5
Q ss_pred ccCCCCCCCeEE-----EEECCCCCEEEEecC-CCc--EEEEECCCCCccEEeccCC
Q 035276 12 NQNPNKSIEVLC-----STLKDDGITVFSGGC-DKQ--VKTWPLLSGGQPVIVAMHD 60 (69)
Q Consensus 12 ~~~~~~~~~v~~-----~~~s~~~~~l~s~~~-d~~--v~iwd~~t~~~~~~~~~h~ 60 (69)
.++..+...... .+|+|||++|+..+. ++. |.+||+.+++......++.
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~ 80 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRG 80 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSC
T ss_pred EEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCC
Confidence 344455544554 789999999988776 663 8888988865444334443
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.45 E-value=0.00032 Score=40.71 Aligned_cols=33 Identities=6% Similarity=0.077 Sum_probs=27.5
Q ss_pred CCCCeEEEEECCCCCEEEEec-CCCcEEEEECCC
Q 035276 17 KSIEVLCSTLKDDGITVFSGG-CDKQVKTWPLLS 49 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~-~d~~v~iwd~~t 49 (69)
+...+..++|+|||++|++++ .++.+++||+..
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 455677899999999988877 778999999964
No 161
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.45 E-value=5.8e-05 Score=47.76 Aligned_cols=40 Identities=8% Similarity=-0.123 Sum_probs=30.8
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCC-----CCccEEe
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLS-----GGQPVIV 56 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t-----~~~~~~~ 56 (69)
.+...+..++|+|||++|+.. .|+.|.+||+.+ ++.....
T Consensus 118 ~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~ 162 (706)
T 2z3z_A 118 DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVT 162 (706)
T ss_dssp CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESC
T ss_pred CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEec
Confidence 345567778999999999884 678999999988 6654433
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.42 E-value=0.00027 Score=44.45 Aligned_cols=54 Identities=17% Similarity=0.103 Sum_probs=37.8
Q ss_pred CCCCCeEEEEECCCCCEEEEecCC--------CcEEEEECC-CCC--ccEE-eccCCCcEEEEEeC
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCD--------KQVKTWPLL-SGG--QPVI-VAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d--------~~v~iwd~~-t~~--~~~~-~~~h~~~i~~v~~s 69 (69)
.+...+..++|+|||++|+..+.+ ..|.+||+. ++. .... ..+|...+..+.|+
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 444566778999999999877644 379999998 551 3333 34456777888775
No 163
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.39 E-value=0.00026 Score=40.81 Aligned_cols=48 Identities=10% Similarity=-0.092 Sum_probs=34.6
Q ss_pred eEEEEECCCCCEEEEec--CCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 21 VLCSTLKDDGITVFSGG--CDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~--~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
+..++|+|++++++.+. .++.|.+||+.+++....+..+...+..+.|
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL 192 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence 57899999999887765 4788999999987666666534443444443
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.38 E-value=6.4e-05 Score=47.72 Aligned_cols=48 Identities=6% Similarity=-0.042 Sum_probs=35.6
Q ss_pred EEEEECCCCCEEEEecCCC----------------------------------cEEEEECCCCCcc--------EEeccC
Q 035276 22 LCSTLKDDGITVFSGGCDK----------------------------------QVKTWPLLSGGQP--------VIVAMH 59 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~~d~----------------------------------~v~iwd~~t~~~~--------~~~~~h 59 (69)
..++|+|||++|+.++.|. .|++||+.+++.. ..+.+|
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 3789999999999877552 7889999886532 113357
Q ss_pred CCcEEEEEeC
Q 035276 60 DAPIKTIRLL 69 (69)
Q Consensus 60 ~~~i~~v~~s 69 (69)
...+..++||
T Consensus 252 ~~~~~~~~~S 261 (719)
T 1z68_A 252 DYYFSWLTWV 261 (719)
T ss_dssp CEEEEEEEES
T ss_pred cceEEEeEEe
Confidence 7788888885
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.38 E-value=0.0002 Score=44.98 Aligned_cols=53 Identities=11% Similarity=0.008 Sum_probs=37.6
Q ss_pred CCCCeEEEEECCCCCEEEEecCC----------CcEEEEECCCC-----CccEEec-cCCCcEEEEEeC
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCD----------KQVKTWPLLSG-----GQPVIVA-MHDAPIKTIRLL 69 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d----------~~v~iwd~~t~-----~~~~~~~-~h~~~i~~v~~s 69 (69)
+...+..++|+|||+.|+..+.| ..|.+||+.++ .....+. .+...+..++||
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~S 196 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLS 196 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEEC
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceEC
Confidence 55667889999999999988876 58999999872 2344454 444555555554
No 166
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.34 E-value=0.00049 Score=42.10 Aligned_cols=51 Identities=8% Similarity=0.081 Sum_probs=38.9
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCc--cEEe------c---cCCCcEEEEEeC
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQ--PVIV------A---MHDAPIKTIRLL 69 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~--~~~~------~---~h~~~i~~v~~s 69 (69)
+...|.+++|+|+| ++.+..|+++++|+...+.. ...+ . +|...|.++.|.
T Consensus 161 ~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl 222 (388)
T 1xip_A 161 LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTIL 222 (388)
T ss_dssp EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEES
T ss_pred ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEe
Confidence 34578999999999 67788999999998876543 3344 2 377889888884
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.34 E-value=0.0017 Score=38.26 Aligned_cols=52 Identities=12% Similarity=0.045 Sum_probs=36.3
Q ss_pred CCCeEEEEECCCCCEEEEec-CCCcEEEEECC-CCCcc--EEec--cCCCcEEEEEeC
Q 035276 18 SIEVLCSTLKDDGITVFSGG-CDKQVKTWPLL-SGGQP--VIVA--MHDAPIKTIRLL 69 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~-~d~~v~iwd~~-t~~~~--~~~~--~h~~~i~~v~~s 69 (69)
...+..++|+|||++|+++. .+..|.+||+. +++.. ..+. .|...+..++|+
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~s 201 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMH 201 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEEC
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEEC
Confidence 45678899999999887765 46799999998 65432 2222 235567777764
No 168
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.31 E-value=0.00025 Score=45.34 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=28.4
Q ss_pred CCCCeEEEEECCCCCEEEEecCCC-----cEEEEECCCCCccE
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDK-----QVKTWPLLSGGQPV 54 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~-----~v~iwd~~t~~~~~ 54 (69)
+...+..++|||||++|+.+..++ .|++||+.+++...
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~ 165 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP 165 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCc
Confidence 334577899999999987654432 89999999876543
No 169
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.31 E-value=0.00018 Score=45.96 Aligned_cols=38 Identities=13% Similarity=0.091 Sum_probs=29.6
Q ss_pred CCCCCeEEEEECCCCCEEE-----EecCCCcEEEEECCCCCcc
Q 035276 16 NKSIEVLCSTLKDDGITVF-----SGGCDKQVKTWPLLSGGQP 53 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~-----s~~~d~~v~iwd~~t~~~~ 53 (69)
+|...+..++|||||++|+ .|+.+..|++||+.+++..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~ 160 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS 160 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc
Confidence 3444678899999999987 4455679999999987653
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.24 E-value=0.00046 Score=44.40 Aligned_cols=47 Identities=6% Similarity=-0.086 Sum_probs=36.5
Q ss_pred EEEEECCCCCEEEEecCC---------CcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 22 LCSTLKDDGITVFSGGCD---------KQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~~d---------~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+++|||||++|+.++.+ +.+.+||+.+++ ...+..|...+..++||
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~-~~~l~~~~~~~~~~~~S 120 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPNNTQWVTWS 120 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCTTEEEEEEC
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc-EEEcccCCCcceeeEEC
Confidence 457899999999988876 456699999864 34466677788888886
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.22 E-value=0.00022 Score=45.88 Aligned_cols=40 Identities=8% Similarity=0.121 Sum_probs=32.7
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCC
Q 035276 20 EVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDA 61 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~ 61 (69)
....+.|+||+++++++ |+.|++||+.++++...+.+|..
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~ 57 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTF 57 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTT
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhh
Confidence 35678999999988886 99999999999887666666653
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.12 E-value=0.0013 Score=37.97 Aligned_cols=48 Identities=10% Similarity=0.072 Sum_probs=32.1
Q ss_pred CeEEEEECCCCCEEEEecCC---C--cEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 20 EVLCSTLKDDGITVFSGGCD---K--QVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d---~--~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+..++|+|||++|+..+.+ + .|.+||+.+++.. .+..+.. +..++|+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~-~l~~~~~-~~~~~ws 112 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK-KILEAKN-IRSLEWN 112 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE-EEEEESE-EEEEEEC
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE-EEEcCCC-ccceeEC
Confidence 45678999999999876643 2 4778888775433 3333333 7777775
No 173
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.12 E-value=0.0039 Score=39.67 Aligned_cols=48 Identities=21% Similarity=0.207 Sum_probs=35.1
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEECC--CCCccEEeccCCCcEEEEEe
Q 035276 20 EVLCSTLKDDGITVFSGGCDKQVKTWPLL--SGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~~v~iwd~~--t~~~~~~~~~h~~~i~~v~~ 68 (69)
.+..+.|+|||+++++++.|+.|.+||+. +++.+..+.... ....++|
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~ 247 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIET 247 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEE
Confidence 45688999999999999999999999995 665555554322 2344444
No 174
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.10 E-value=0.0004 Score=44.08 Aligned_cols=46 Identities=9% Similarity=0.093 Sum_probs=33.7
Q ss_pred EEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCC---cEEEEEeC
Q 035276 23 CSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDA---PIKTIRLL 69 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~---~i~~v~~s 69 (69)
+++|+||++++++ +.|+.|++||+.+++....+..|.. .+.+++||
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~S 68 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLS 68 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEEC
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEEC
Confidence 6799999965555 4699999999999776555554433 36677765
No 175
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.99 E-value=0.0051 Score=35.36 Aligned_cols=50 Identities=8% Similarity=-0.065 Sum_probs=40.2
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
..+..++++++|+..++...++.|.+||..+++.+..+..+...+.+++|
T Consensus 199 ~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 199 QIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp CEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEE
T ss_pred CCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEE
Confidence 44677899999987777777788999999888877777767677888877
No 176
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.96 E-value=0.0093 Score=33.87 Aligned_cols=50 Identities=4% Similarity=-0.024 Sum_probs=38.5
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
..+..++++++|+.+++...++.|.+||..+++....+..+...+.+++|
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~ 275 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHF 275 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEE
Confidence 45678999999998887777889999998876666666556566777765
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.95 E-value=0.0098 Score=34.65 Aligned_cols=52 Identities=8% Similarity=-0.166 Sum_probs=37.3
Q ss_pred CCCCeEEEEECCCCCEEEEecCC------------------------CcEEEEECCCCCccEEec-cCCCcEEEEEe
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCD------------------------KQVKTWPLLSGGQPVIVA-MHDAPIKTIRL 68 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d------------------------~~v~iwd~~t~~~~~~~~-~h~~~i~~v~~ 68 (69)
..+.+..++++|+|+.+++...+ +.|.+||..+++....+. ++...+..+++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE
Confidence 35568999999999988887777 479999998876654443 33345555554
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.94 E-value=0.0035 Score=35.72 Aligned_cols=50 Identities=8% Similarity=-0.133 Sum_probs=37.9
Q ss_pred CCCCeEEEEECCCCC-EEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 17 KSIEVLCSTLKDDGI-TVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~-~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
+......++|+|+++ .++++..++.|..||..++ ...+..+...+..+++
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~ 76 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCL 76 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEE
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeE
Confidence 444567899999998 6778888999999999875 5555556666777665
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.86 E-value=0.0053 Score=35.79 Aligned_cols=50 Identities=6% Similarity=-0.070 Sum_probs=35.9
Q ss_pred CCeEEEEECCC-CCEEEEecCCCcEEEEECCCCCccEEe--ccCCCcEEEEEe
Q 035276 19 IEVLCSTLKDD-GITVFSGGCDKQVKTWPLLSGGQPVIV--AMHDAPIKTIRL 68 (69)
Q Consensus 19 ~~v~~~~~s~~-~~~l~s~~~d~~v~iwd~~t~~~~~~~--~~h~~~i~~v~~ 68 (69)
..+..++++|+ +..+++...++.|++||..+++.+..+ ..+...+..++|
T Consensus 196 ~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 248 (329)
T 3fvz_A 196 SVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISY 248 (329)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEE
T ss_pred CCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeee
Confidence 34788999998 666677778899999999877766655 334445555544
No 180
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=96.83 E-value=0.0067 Score=37.13 Aligned_cols=48 Identities=13% Similarity=0.109 Sum_probs=36.1
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
+.. |..++| |+..|+.+ .++.|++||+.+......+..|...+..+++
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~ 134 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKN 134 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEE
T ss_pred CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEe
Confidence 445 889999 88999888 8889999999875554555667777766654
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.81 E-value=0.0018 Score=38.58 Aligned_cols=44 Identities=5% Similarity=-0.069 Sum_probs=33.4
Q ss_pred EEECCCCCEEEEecC-----------CCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 24 STLKDDGITVFSGGC-----------DKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 24 ~~~s~~~~~l~s~~~-----------d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
++|+||+++++.+.. +..|.+||+.+++.+..+..+. +..++|+
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~s 313 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTID 313 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEEC
Confidence 689999998877543 3479999999988777777665 6666663
No 182
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.74 E-value=0.00093 Score=39.41 Aligned_cols=32 Identities=16% Similarity=0.134 Sum_probs=25.0
Q ss_pred CeEEEE-ECCCCCEEEEecCCC------cEEEEECC-CCC
Q 035276 20 EVLCST-LKDDGITVFSGGCDK------QVKTWPLL-SGG 51 (69)
Q Consensus 20 ~v~~~~-~s~~~~~l~s~~~d~------~v~iwd~~-t~~ 51 (69)
.+..++ |+|||++|++++.+. .|++|++. +++
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC
Confidence 477899 999999988765432 79999996 444
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.73 E-value=0.0045 Score=39.58 Aligned_cols=48 Identities=8% Similarity=-0.045 Sum_probs=34.1
Q ss_pred EEEEECCCCCEEEEecCCCc-------------EEEEECCCCCcc--E--EeccCCCcEEEEEeC
Q 035276 22 LCSTLKDDGITVFSGGCDKQ-------------VKTWPLLSGGQP--V--IVAMHDAPIKTIRLL 69 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~~d~~-------------v~iwd~~t~~~~--~--~~~~h~~~i~~v~~s 69 (69)
..++|+|||+.|+.++.|.. |.+|++.++... . ....|...+..+.||
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 56899999999998888776 999999886521 2 223344556666664
No 184
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.65 E-value=0.001 Score=42.90 Aligned_cols=35 Identities=20% Similarity=0.099 Sum_probs=27.2
Q ss_pred CCeEEEEECCCCCEEEEecCC-----CcEEEEECCCCCcc
Q 035276 19 IEVLCSTLKDDGITVFSGGCD-----KQVKTWPLLSGGQP 53 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d-----~~v~iwd~~t~~~~ 53 (69)
..+..++|||||++|+.+..+ ..|++||+.+++..
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~ 202 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPL 202 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEE
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC
Confidence 356789999999998765543 46999999997653
No 185
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.43 E-value=0.029 Score=31.59 Aligned_cols=49 Identities=6% Similarity=0.046 Sum_probs=34.3
Q ss_pred CCeEEEEECCCCCEEEEecCCC-cEEEEECCCCCccEEeccCCC--cEEEEEe
Q 035276 19 IEVLCSTLKDDGITVFSGGCDK-QVKTWPLLSGGQPVIVAMHDA--PIKTIRL 68 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~-~v~iwd~~t~~~~~~~~~h~~--~i~~v~~ 68 (69)
..+..++++++|+.+++...++ .|.+||.. ++.+..+..+.. .+..+++
T Consensus 207 ~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~ 258 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVAL 258 (286)
T ss_dssp CSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEE
T ss_pred CCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEE
Confidence 5678999999999888877775 99999954 455555544432 2445554
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.42 E-value=0.013 Score=37.60 Aligned_cols=49 Identities=14% Similarity=0.114 Sum_probs=33.1
Q ss_pred eEEEEECCCCCEEEEecCCCc----------------EEEEECCCCCcc--EEe--ccCCCcEEEEEeC
Q 035276 21 VLCSTLKDDGITVFSGGCDKQ----------------VKTWPLLSGGQP--VIV--AMHDAPIKTIRLL 69 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~d~~----------------v~iwd~~t~~~~--~~~--~~h~~~i~~v~~s 69 (69)
+..++|+|||+.|+.+..++. |.+|++.++... ..+ ..|...+..+.||
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~S 241 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELS 241 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEEC
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEc
Confidence 345899999999988877765 999999876532 222 2244445566654
No 187
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.42 E-value=0.0018 Score=41.52 Aligned_cols=37 Identities=11% Similarity=0.026 Sum_probs=28.0
Q ss_pred CCCCeEEEEECCCCCEEEE-----ecCCCcEEEEECCCCCcc
Q 035276 17 KSIEVLCSTLKDDGITVFS-----GGCDKQVKTWPLLSGGQP 53 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s-----~~~d~~v~iwd~~t~~~~ 53 (69)
+...+..++|||||++|+- |+.+..|++||+.+++.+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~ 168 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPL 168 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEE
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCC
Confidence 4456778899999998873 333468999999997643
No 188
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.41 E-value=0.027 Score=31.70 Aligned_cols=40 Identities=5% Similarity=0.032 Sum_probs=31.6
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
++...+..++++++++.+++...++.|++||.. ++....+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~ 66 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQF 66 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEe
Confidence 455668899999999988888889999999976 4554444
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.34 E-value=0.053 Score=31.12 Aligned_cols=52 Identities=10% Similarity=-0.031 Sum_probs=34.9
Q ss_pred CCCCeEEEEECCCCCEEEEecCC----CcEEEEECCCCCccEEec--cCCCcEEEEEe
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCD----KQVKTWPLLSGGQPVIVA--MHDAPIKTIRL 68 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d----~~v~iwd~~t~~~~~~~~--~h~~~i~~v~~ 68 (69)
+...+..++|+++++.+++...+ +.|.+||..++.....+. .+...+..+.+
T Consensus 85 ~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 142 (333)
T 2dg1_A 85 HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVF 142 (333)
T ss_dssp SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEE
T ss_pred CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEE
Confidence 44568899999999987776666 689999988754432222 23344555554
No 190
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.32 E-value=0.012 Score=34.29 Aligned_cols=33 Identities=15% Similarity=0.063 Sum_probs=27.2
Q ss_pred EEECCCCCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 24 STLKDDGITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 24 ~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
+.|+|||++|+..+.++.|.+||+.+++.....
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~ 118 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIY 118 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEE
Confidence 679999999998888889999999886544333
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.30 E-value=0.014 Score=33.65 Aligned_cols=50 Identities=12% Similarity=-0.053 Sum_probs=36.2
Q ss_pred CCCCCeEE-EEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEeC
Q 035276 16 NKSIEVLC-STLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRLL 69 (69)
Q Consensus 16 ~~~~~v~~-~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~s 69 (69)
.+...+.. +.|+ |+ .++++..++.+++| +.+++ ...+..+...|..+.|+
T Consensus 260 ~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~-~~~~~~~~~~v~~~~~s 310 (347)
T 2gop_A 260 EVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGE-IKPIAKGRHWIMGFDVD 310 (347)
T ss_dssp TCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSS-EEEEECSSSEEEEEEES
T ss_pred cCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCc-eEEEecCCCeEEeeeee
Confidence 45566776 8999 88 88888999999999 87543 34444456677777664
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.28 E-value=0.021 Score=34.36 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=30.5
Q ss_pred CeEEEEECCCCC-EEEEec-CCCcEEEEECCCCCccEE
Q 035276 20 EVLCSTLKDDGI-TVFSGG-CDKQVKTWPLLSGGQPVI 55 (69)
Q Consensus 20 ~v~~~~~s~~~~-~l~s~~-~d~~v~iwd~~t~~~~~~ 55 (69)
....++|+|||+ .++++. .++.|.++|+.+++.+..
T Consensus 319 ~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 319 DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 467889999999 788887 589999999999877665
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.95 E-value=0.013 Score=33.80 Aligned_cols=39 Identities=3% Similarity=-0.120 Sum_probs=29.3
Q ss_pred CCCEEEEecCCCcEEEEECCCCCccEEeccCC-CcEEEEE
Q 035276 29 DGITVFSGGCDKQVKTWPLLSGGQPVIVAMHD-APIKTIR 67 (69)
Q Consensus 29 ~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~-~~i~~v~ 67 (69)
.++.|++++.|+.|++||.++|+.+..+..+. ..+..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~ 43 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVA 43 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeE
Confidence 46788999999999999998988777776554 2344443
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.92 E-value=0.019 Score=32.60 Aligned_cols=47 Identities=11% Similarity=-0.003 Sum_probs=33.8
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 18 SIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
...+..++++++|+.+++. ++.|.+||.. ++.+..+..+.. +.+++|
T Consensus 217 ~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f 263 (296)
T 3e5z_A 217 PGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCF 263 (296)
T ss_dssp SSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEE
T ss_pred CCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEE
Confidence 3345578999999866655 7889999986 566666665655 666665
No 195
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.88 E-value=0.002 Score=37.67 Aligned_cols=31 Identities=13% Similarity=0.160 Sum_probs=22.9
Q ss_pred eEEEEECCCCCEEEEecC---CCcEEEEECCCCC
Q 035276 21 VLCSTLKDDGITVFSGGC---DKQVKTWPLLSGG 51 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~---d~~v~iwd~~t~~ 51 (69)
+..++|+|||++|+.... +..|.+||+.+++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~ 71 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ 71 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCc
Confidence 556789999999876543 2468888988754
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.69 E-value=0.03 Score=34.33 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=30.5
Q ss_pred CeEEEEECCCCC-EEEEe-cCCCcEEEEECCCCCccEEec
Q 035276 20 EVLCSTLKDDGI-TVFSG-GCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 20 ~v~~~~~s~~~~-~l~s~-~~d~~v~iwd~~t~~~~~~~~ 57 (69)
++..+++++|++ .|++. ..++.|.++|..+++.+..+.
T Consensus 332 ~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 332 EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 456789999997 77765 458999999999988776653
No 197
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.62 E-value=0.026 Score=34.18 Aligned_cols=41 Identities=10% Similarity=0.153 Sum_probs=31.7
Q ss_pred CeEEEEECCCCCE-EEEec-CCCcEEEEECCCCCccEEeccCC
Q 035276 20 EVLCSTLKDDGIT-VFSGG-CDKQVKTWPLLSGGQPVIVAMHD 60 (69)
Q Consensus 20 ~v~~~~~s~~~~~-l~s~~-~d~~v~iwd~~t~~~~~~~~~h~ 60 (69)
....++|+||+++ +++.. .++.|.++|+.+++.+..+....
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 3567899999985 56666 58999999999987777775443
No 198
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=95.48 E-value=0.13 Score=29.99 Aligned_cols=49 Identities=8% Similarity=-0.039 Sum_probs=36.2
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
..+..++++++|...++...++.|.+||. +++.+..+..+...+.+++|
T Consensus 230 ~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 230 GGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAF 278 (326)
T ss_dssp SEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEE
T ss_pred CCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEE
Confidence 34567899999987776666788999998 55665666656666777776
No 199
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.46 E-value=0.14 Score=28.31 Aligned_cols=50 Identities=10% Similarity=-0.037 Sum_probs=33.5
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
..+..++++++|...++...++.|.+||............+...+..+++
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~ 241 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAV 241 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEE
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEE
Confidence 55788999999977777777889999998664322222223344556554
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.43 E-value=0.037 Score=34.28 Aligned_cols=36 Identities=8% Similarity=0.136 Sum_probs=30.9
Q ss_pred eEEEEECCCCC-EEEEec-CCCcEEEEECCCCCccEEe
Q 035276 21 VLCSTLKDDGI-TVFSGG-CDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 21 v~~~~~s~~~~-~l~s~~-~d~~v~iwd~~t~~~~~~~ 56 (69)
...++|+||++ ++++.+ .++.|.++|+.+++.+..+
T Consensus 372 P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 372 IDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp ECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 55689999999 888888 5899999999998877665
No 201
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=95.42 E-value=0.045 Score=36.92 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=31.6
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEE
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVI 55 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~ 55 (69)
..+.+++..++..++++-+.|+++|+|++.++.++..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 3567788888999999999999999999999877554
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.15 E-value=0.085 Score=31.69 Aligned_cols=34 Identities=6% Similarity=-0.082 Sum_probs=27.1
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEECCCCCccEEe
Q 035276 23 CSTLKDDGITVFSGG----------CDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~----------~d~~v~iwd~~t~~~~~~~ 56 (69)
.++++||+++|+.+. .++.|.+||..+.+....+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i 113 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADI 113 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEE
Confidence 889999999998876 3678999999886654443
No 203
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.11 E-value=0.013 Score=35.58 Aligned_cols=35 Identities=6% Similarity=-0.076 Sum_probs=29.4
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEECCCCCccEEec
Q 035276 23 CSTLKDDGITVFSGG----------CDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~----------~d~~v~iwd~~t~~~~~~~~ 57 (69)
.+.++||+++++.+. .++.|.+||+.+++....+.
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~ 113 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIE 113 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEE
Confidence 689999999998886 36789999999987776653
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.10 E-value=0.078 Score=29.99 Aligned_cols=34 Identities=12% Similarity=0.085 Sum_probs=26.8
Q ss_pred CCeEEEEECCCCCEEEE-------ecCCCcEEEEECCCCCc
Q 035276 19 IEVLCSTLKDDGITVFS-------GGCDKQVKTWPLLSGGQ 52 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s-------~~~d~~v~iwd~~t~~~ 52 (69)
..+.+++|+++++.+++ +..++.|.+||..+++.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~ 58 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKK 58 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcE
Confidence 34578999999987777 56788999999877653
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.09 E-value=0.13 Score=33.28 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=29.4
Q ss_pred CCeEEEEECCCCCEEEEecCC-----CcEEEEECCCC--CccEEeccCC
Q 035276 19 IEVLCSTLKDDGITVFSGGCD-----KQVKTWPLLSG--GQPVIVAMHD 60 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d-----~~v~iwd~~t~--~~~~~~~~h~ 60 (69)
..+..+.|+|||++|+..+.+ ..|.+||+.++ ++...+..+.
T Consensus 268 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 316 (741)
T 1yr2_A 268 KRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL 316 (741)
T ss_dssp TCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS
T ss_pred eEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC
Confidence 347889999999998776644 38999999775 3144444333
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.00 E-value=0.044 Score=33.61 Aligned_cols=35 Identities=17% Similarity=0.095 Sum_probs=28.6
Q ss_pred EEEEECCCCCEEEEecC--CCcEEEEECCCCCccEEe
Q 035276 22 LCSTLKDDGITVFSGGC--DKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~~--d~~v~iwd~~t~~~~~~~ 56 (69)
..++|+|||++++.++. ++.|.++|+.+++.+..+
T Consensus 140 ~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 140 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred ceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 45799999999988864 689999999997766555
No 207
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.50 E-value=0.3 Score=27.16 Aligned_cols=54 Identities=15% Similarity=0.107 Sum_probs=35.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccE-EeccCCCcEEEEEe
Q 035276 14 NPNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPV-IVAMHDAPIKTIRL 68 (69)
Q Consensus 14 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~-~~~~h~~~i~~v~~ 68 (69)
.+.+...+.+++++++|+.+++...++.|.+||.. +.... ....+...+..+++
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~ 64 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTI 64 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEE
Confidence 44555678999999999977776668889999987 44322 12223344555544
No 208
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=94.43 E-value=0.042 Score=37.58 Aligned_cols=36 Identities=8% Similarity=-0.032 Sum_probs=29.8
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEE
Q 035276 20 EVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVI 55 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~ 55 (69)
.+.+++..++.+++++-+.|+++|+|++.++.++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 345566777889999999999999999999877654
No 209
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.42 E-value=0.18 Score=27.86 Aligned_cols=32 Identities=9% Similarity=0.041 Sum_probs=25.7
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEECCCCC
Q 035276 20 EVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG 51 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~ 51 (69)
.+..++++++++.+++...++.|.+||.....
T Consensus 151 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 151 DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp SCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred CceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 46778999999977777778899999987643
No 210
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.29 E-value=0.18 Score=32.14 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=31.7
Q ss_pred CCCeEEEEECCCCCEEEEecC-----CCcEEEEECCCCCccEEec
Q 035276 18 SIEVLCSTLKDDGITVFSGGC-----DKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~-----d~~v~iwd~~t~~~~~~~~ 57 (69)
...+..+.|+|+|+.++.+.+ ++.|.++|.++++....++
T Consensus 502 ~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 502 QPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp CCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred CcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 346788999999999877643 6899999999976655554
No 211
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=94.18 E-value=0.36 Score=28.06 Aligned_cols=31 Identities=10% Similarity=-0.075 Sum_probs=26.0
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEECCCCCc
Q 035276 20 EVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQ 52 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~ 52 (69)
.+..++|+||++.|+.+.. .|.+||+.+++.
T Consensus 226 ~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp CCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred CceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 5688999999999988765 899999988654
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.57 E-value=0.28 Score=29.76 Aligned_cols=34 Identities=6% Similarity=-0.099 Sum_probs=27.7
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEECCCCCc
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQ 52 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~ 52 (69)
..+..++|+++++.+++...++.|++||..++..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~ 164 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV 164 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEE
Confidence 3578899999999777777789999999987543
No 213
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.34 E-value=0.28 Score=28.12 Aligned_cols=36 Identities=11% Similarity=-0.058 Sum_probs=29.6
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCCccEEecc
Q 035276 22 LCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAM 58 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~ 58 (69)
..+++.++|+++++...++.|..||.+ |+.+..+..
T Consensus 128 ~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~ 163 (276)
T 3no2_A 128 RQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL 163 (276)
T ss_dssp SCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC
T ss_pred cCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC
Confidence 345678999999999999999999987 787766654
No 214
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.20 E-value=0.21 Score=29.08 Aligned_cols=48 Identities=2% Similarity=-0.212 Sum_probs=31.6
Q ss_pred eEEEEECCCCCEEEEecCC----------CcEEEEECCCCCccEEeccC-CCcEEEEEe
Q 035276 21 VLCSTLKDDGITVFSGGCD----------KQVKTWPLLSGGQPVIVAMH-DAPIKTIRL 68 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~d----------~~v~iwd~~t~~~~~~~~~h-~~~i~~v~~ 68 (69)
+..++++|+|+.++++..+ +.|.++|..+++....+... ......++|
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~ 232 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQL 232 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEE
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEE
Confidence 3567899999977776654 78999999886554444321 224555555
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.09 E-value=0.6 Score=26.66 Aligned_cols=49 Identities=12% Similarity=0.017 Sum_probs=32.0
Q ss_pred CCCeEEEEECCCCC-EEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 18 SIEVLCSTLKDDGI-TVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 18 ~~~v~~~~~s~~~~-~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
........|+|+++ .+++...++.|..|+. +++ ...+..+...+..+.+
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~ 93 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAV 93 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeE
Confidence 34456789999998 5577778889999997 433 3334334444555544
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.91 E-value=0.91 Score=27.48 Aligned_cols=39 Identities=21% Similarity=0.164 Sum_probs=29.6
Q ss_pred CeEEEEECCCCCEEEEec-CCCcEEEEECCCCCccEEeccC
Q 035276 20 EVLCSTLKDDGITVFSGG-CDKQVKTWPLLSGGQPVIVAMH 59 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~-~d~~v~iwd~~t~~~~~~~~~h 59 (69)
.+..++++++|+..++-. .+..|++||+.++. +..+.++
T Consensus 324 ~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~ 363 (409)
T 3hrp_A 324 QPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQ 363 (409)
T ss_dssp SEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEEC
T ss_pred CCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCC
Confidence 467899999999777777 78999999987753 4444443
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=92.86 E-value=0.065 Score=33.19 Aligned_cols=34 Identities=9% Similarity=-0.012 Sum_probs=28.0
Q ss_pred EEEECCCCCEEEEec----------CCCcEEEEECCCCCccEEe
Q 035276 23 CSTLKDDGITVFSGG----------CDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~----------~d~~v~iwd~~t~~~~~~~ 56 (69)
.++++||+++|+.+. .++.|.++|..+++....+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I 165 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADI 165 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEE
Confidence 789999999998876 3678999999997765544
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=92.81 E-value=0.43 Score=27.86 Aligned_cols=48 Identities=2% Similarity=-0.106 Sum_probs=32.8
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEecc--CCCcEEEEEe
Q 035276 20 EVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVAM--HDAPIKTIRL 68 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~--h~~~i~~v~~ 68 (69)
....++++++|...++...++.|.+||.++++ +..+.. +...+..++|
T Consensus 249 ~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 249 ICDGISIDKDHNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp SCSCEEECTTCCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEE
T ss_pred CCceEEECCCCCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEE
Confidence 34568999999988888889999999985554 333221 2344566655
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=92.73 E-value=0.26 Score=28.83 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=29.6
Q ss_pred CCCCCeEEEEECCCCCEEEEecC-----CCcEEEEECCCCCccEEe
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGC-----DKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~-----d~~v~iwd~~t~~~~~~~ 56 (69)
.+...+..++++++++.+++-.. +..|.+||+.+++.+..+
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~ 109 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVI 109 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEE
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEE
Confidence 34567899999999876555433 578999999887644433
No 220
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.32 E-value=0.8 Score=25.39 Aligned_cols=49 Identities=8% Similarity=-0.129 Sum_probs=32.4
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEe--ccCCCcEEEEE
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIV--AMHDAPIKTIR 67 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~--~~h~~~i~~v~ 67 (69)
+...+..++++++|+..++...++.|.+||. ++ .+..+ ..+...+.++.
T Consensus 223 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g-~~~~~~~~~~~~~~~~i~ 273 (299)
T 2z2n_A 223 PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NN-IIEEYPIQIKSAEPHGIC 273 (299)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TT-EEEEEECSSSSCCEEEEE
T ss_pred CCCCceeEEECCCCCEEEeccCCceEEEECC-CC-ceEEEeCCCCCCccceEE
Confidence 3456789999999986666667788999998 43 33322 33444555554
No 221
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.65 E-value=0.31 Score=31.67 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=27.1
Q ss_pred EECCCCCEEEEecCCCcEEEEECCCCCccEEec
Q 035276 25 TLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 25 ~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~ 57 (69)
.+...+..++.++.|+.++.||.++|+.+..+.
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceECCCEEEEECCCCcEEEEECCCCccceeee
Confidence 455567788889999999999999998876654
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=91.35 E-value=0.34 Score=28.84 Aligned_cols=29 Identities=10% Similarity=0.079 Sum_probs=23.3
Q ss_pred CCCEEEEecCCCcEEEEECCCCCccEEec
Q 035276 29 DGITVFSGGCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 29 ~~~~l~s~~~d~~v~iwd~~t~~~~~~~~ 57 (69)
++..|++++.|+.|..||..+|+.+..+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~ 36 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK 36 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec
Confidence 57788889999999999999887765543
No 223
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=91.16 E-value=0.67 Score=30.91 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=25.7
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCCccEE
Q 035276 21 VLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVI 55 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~ 55 (69)
|.++.+ +..++++-+.|.++|+||+.++.++..
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 433344 477999999999999999999876544
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=90.86 E-value=0.26 Score=31.95 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=28.1
Q ss_pred EEEECCCCCEEEEecCCCcEEEEECCCCCccEEec
Q 035276 23 CSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~ 57 (69)
...+..++..++.++.|+.+++||+.+|+.+..+.
T Consensus 481 ~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 481 GGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CcceEeCCCEEEEECCCCcEEEEECCCCceeeeee
Confidence 33455677888889999999999999998876664
No 225
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=90.51 E-value=0.7 Score=29.17 Aligned_cols=33 Identities=6% Similarity=0.064 Sum_probs=28.5
Q ss_pred CCCCeEEEEECCC---CCEEEEecCCCcEEEEECCC
Q 035276 17 KSIEVLCSTLKDD---GITVFSGGCDKQVKTWPLLS 49 (69)
Q Consensus 17 ~~~~v~~~~~s~~---~~~l~s~~~d~~v~iwd~~t 49 (69)
...+|..+.|.|- +..|++-..|++|++||+..
T Consensus 123 ~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 123 PKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 3678999999995 56899999999999999975
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=89.93 E-value=1.1 Score=26.09 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=26.3
Q ss_pred eEEEEECCCCCEEEEe-cC--CCcEEEEECCCCCccEEe
Q 035276 21 VLCSTLKDDGITVFSG-GC--DKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~-~~--d~~v~iwd~~t~~~~~~~ 56 (69)
...+.|++|+ .|+.+ +. +..|++.|+.+++.+..+
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i 60 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIH 60 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEE
T ss_pred cccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEE
Confidence 5789999986 55544 32 579999999998776654
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=89.70 E-value=2.4 Score=27.26 Aligned_cols=43 Identities=9% Similarity=0.022 Sum_probs=28.3
Q ss_pred CCCeEEEEECCCCCEEEEe-c---CCCcEEEEECCCCC-ccEEeccCC
Q 035276 18 SIEVLCSTLKDDGITVFSG-G---CDKQVKTWPLLSGG-QPVIVAMHD 60 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~-~---~d~~v~iwd~~t~~-~~~~~~~h~ 60 (69)
......+.|+|||++|+.. . .+..+.++|+.++. ....+..+.
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 3446789999999987433 2 23589999997753 344444443
No 228
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=89.60 E-value=1.6 Score=24.12 Aligned_cols=34 Identities=12% Similarity=0.042 Sum_probs=27.7
Q ss_pred CCCCCCeEEEEECCCCCEEEEecCCCcEEEEECC
Q 035276 15 PNKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLL 48 (69)
Q Consensus 15 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~ 48 (69)
+.....+.+++++++|+..++...++.|.+||..
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 49 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS 49 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC
Confidence 3445578899999999977777778899999977
No 229
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=89.55 E-value=0.62 Score=26.60 Aligned_cols=30 Identities=10% Similarity=0.153 Sum_probs=23.4
Q ss_pred eEEEEECCCCCEEEEecCC------CcEEEEECCCC
Q 035276 21 VLCSTLKDDGITVFSGGCD------KQVKTWPLLSG 50 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~d------~~v~iwd~~t~ 50 (69)
...++|+||++.|+.+... +.|.+||+..+
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 4578999999988776554 68999998653
No 230
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=89.51 E-value=0.11 Score=30.90 Aligned_cols=34 Identities=6% Similarity=-0.109 Sum_probs=17.9
Q ss_pred EEEECCCCCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 23 CSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
+..+..+++.+++++.|+.+..||.++|+.+..+
T Consensus 42 s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 42 QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp CCC-----CCEEECTTTCCEEEC-----CCSEEC
T ss_pred ecceEcCCCEEEEeCCCCEEEEEECCCCceeeee
Confidence 3345567777777889999999999888765444
No 231
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=89.42 E-value=1.8 Score=24.58 Aligned_cols=46 Identities=20% Similarity=0.226 Sum_probs=30.1
Q ss_pred eEEEEECCCCC-EEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 21 VLCSTLKDDGI-TVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 21 v~~~~~s~~~~-~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
.....|+++++ .+++...++.|..||..++.. ..+ .....+.++++
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~~~~~~~~i~~ 61 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-TMDAPVSSVAL 61 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-ECSSCEEEEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-eCCCceEEEEE
Confidence 35678999655 456667788999999987543 322 23445666554
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=88.53 E-value=1.3 Score=27.97 Aligned_cols=30 Identities=10% Similarity=0.007 Sum_probs=24.5
Q ss_pred CeEEEEECCCCCEEEEec-CCCcEEEEECCC
Q 035276 20 EVLCSTLKDDGITVFSGG-CDKQVKTWPLLS 49 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~-~d~~v~iwd~~t 49 (69)
.+..+.+++||++|+.++ ..+.|.+||+..
T Consensus 322 ~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 322 LVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred ceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 356789999999997765 578999999964
No 233
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=87.27 E-value=0.86 Score=29.79 Aligned_cols=31 Identities=6% Similarity=-0.126 Sum_probs=23.4
Q ss_pred CeEEEEEC-CCCCEEEEec-CC----CcEEEEECCCC
Q 035276 20 EVLCSTLK-DDGITVFSGG-CD----KQVKTWPLLSG 50 (69)
Q Consensus 20 ~v~~~~~s-~~~~~l~s~~-~d----~~v~iwd~~t~ 50 (69)
.+...+|| |||++|+-.. .+ ..|+++|+.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g 211 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDP 211 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCC
Confidence 46678999 9999886432 22 35999999987
No 234
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=86.78 E-value=3.1 Score=24.05 Aligned_cols=29 Identities=17% Similarity=0.017 Sum_probs=22.6
Q ss_pred CeEEEEECCCCCEEEEe-cCCCcEEEEECC
Q 035276 20 EVLCSTLKDDGITVFSG-GCDKQVKTWPLL 48 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~-~~d~~v~iwd~~ 48 (69)
....++|+||++.++.+ ..++.|.+||+.
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 34678999999877544 567899999985
No 235
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=86.54 E-value=2.7 Score=23.18 Aligned_cols=34 Identities=18% Similarity=0.298 Sum_probs=26.7
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEECCCCCc
Q 035276 18 SIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQ 52 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~ 52 (69)
...+..++++++++..++...++.|..||.. ++.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 3567889999999977777777889999977 443
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=84.30 E-value=1.8 Score=28.23 Aligned_cols=30 Identities=7% Similarity=-0.077 Sum_probs=24.2
Q ss_pred eEEEEECCCCCEEEEe-cCCCcEEEEECCCC
Q 035276 21 VLCSTLKDDGITVFSG-GCDKQVKTWPLLSG 50 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~-~~d~~v~iwd~~t~ 50 (69)
...+.++|||++++.+ ..+.+|.++|+.+.
T Consensus 279 PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 279 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp CCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred ceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 4568999999988654 47889999999853
No 237
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=83.02 E-value=2.9 Score=25.29 Aligned_cols=29 Identities=10% Similarity=0.126 Sum_probs=22.9
Q ss_pred eEEEEECCCCCEEEEe-cCCCcEEEEECCC
Q 035276 21 VLCSTLKDDGITVFSG-GCDKQVKTWPLLS 49 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~-~~d~~v~iwd~~t 49 (69)
...++|+||++.|+.+ +..+.|..||+..
T Consensus 223 pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 223 ANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 3568999999988655 4678899999864
No 238
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=82.90 E-value=4.8 Score=22.97 Aligned_cols=47 Identities=4% Similarity=-0.152 Sum_probs=29.8
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCCCccE--EeccCCCcEEEEEe
Q 035276 21 VLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPV--IVAMHDAPIKTIRL 68 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~--~~~~h~~~i~~v~~ 68 (69)
...++++++|+..++....+.|.++|.. ++... .+........+++|
T Consensus 214 P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~ 262 (306)
T 2p4o_A 214 IDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAF 262 (306)
T ss_dssp CSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEE
T ss_pred CCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEE
Confidence 3457899999876666667889999864 44322 22222344666665
No 239
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=82.30 E-value=5.3 Score=23.02 Aligned_cols=43 Identities=12% Similarity=0.007 Sum_probs=31.1
Q ss_pred cCCCCCCCeEEEEECCCCCEEEE-ecCCCcEEEEECCCCCccEEe
Q 035276 13 QNPNKSIEVLCSTLKDDGITVFS-GGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 13 ~~~~~~~~v~~~~~s~~~~~l~s-~~~d~~v~iwd~~t~~~~~~~ 56 (69)
.+++-...+..++|+|++..|++ ...++.|...|+. ++.+..+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i 64 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI 64 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE
Confidence 45565667889999998877754 6667788888887 6655544
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=82.24 E-value=2.7 Score=26.58 Aligned_cols=35 Identities=9% Similarity=0.011 Sum_probs=26.8
Q ss_pred EEEEECCCCCEEEEec-------------------CCCcEEEEECCCCCccEEe
Q 035276 22 LCSTLKDDGITVFSGG-------------------CDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~-------------------~d~~v~iwd~~t~~~~~~~ 56 (69)
.++-|+|+++.+++.. .+.+|.+||+.+++....+
T Consensus 191 Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI 244 (462)
T 2ece_A 191 YDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSL 244 (462)
T ss_dssp CCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEE
T ss_pred ceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEE
Confidence 3577899999998885 3689999999886544444
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=81.43 E-value=2.6 Score=24.64 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=24.6
Q ss_pred EEEEECCCCCEEEEecCCC--cEEEEECCCCCccEEe
Q 035276 22 LCSTLKDDGITVFSGGCDK--QVKTWPLLSGGQPVIV 56 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~~d~--~v~iwd~~t~~~~~~~ 56 (69)
..+.|+ ++....+.+.++ .|+++|+++++.+..+
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~ 81 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQI 81 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEE
T ss_pred ceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEE
Confidence 568888 665555666655 8999999998876554
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=80.17 E-value=2.7 Score=27.44 Aligned_cols=31 Identities=23% Similarity=0.369 Sum_probs=25.2
Q ss_pred CCCeEEEEECCCCCEEE-EecCCCcEEEEECCC
Q 035276 18 SIEVLCSTLKDDGITVF-SGGCDKQVKTWPLLS 49 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~-s~~~d~~v~iwd~~t 49 (69)
....+.++|+++| .++ +.-.|.+|.+||+.+
T Consensus 330 G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred CCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 4457899999999 665 456899999999976
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=80.13 E-value=1.6 Score=25.38 Aligned_cols=31 Identities=10% Similarity=-0.058 Sum_probs=23.7
Q ss_pred ECCCCCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 26 LKDDGITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 26 ~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
+++|++.++.+..++.|.+.|..+.+.+..+
T Consensus 112 lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I 142 (266)
T 2iwa_A 112 LATDGKILYGSDGTSILYEIDPHTFKLIKKH 142 (266)
T ss_dssp EEECSSSEEEECSSSEEEEECTTTCCEEEEE
T ss_pred EEECCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 5567887877777889999999887655544
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=80.12 E-value=3.2 Score=24.38 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=25.3
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 22 LCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
..+.|+ ++....+.+.++.|+++|+++++.+..+
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~ 91 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME 91 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE
Confidence 567776 3455567778888999999998876554
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=80.09 E-value=1.5 Score=25.17 Aligned_cols=30 Identities=10% Similarity=0.017 Sum_probs=24.9
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCCC
Q 035276 21 VLCSTLKDDGITVFSGGCDKQVKTWPLLSG 50 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~ 50 (69)
...++|+++++.++++..++.|..||..++
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~ 50 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNS 50 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCC
Confidence 456789999987888888999999988764
No 246
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=79.90 E-value=2.8 Score=26.75 Aligned_cols=29 Identities=28% Similarity=0.292 Sum_probs=23.6
Q ss_pred CCCEEEEecCCCcEEEEECCCCCccEEec
Q 035276 29 DGITVFSGGCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 29 ~~~~l~s~~~d~~v~iwd~~t~~~~~~~~ 57 (69)
.+..++.++.|+.++.||.++|+.+..+.
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 35677789999999999999998876553
No 247
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=78.25 E-value=7.2 Score=23.52 Aligned_cols=34 Identities=9% Similarity=-0.076 Sum_probs=26.2
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC
Q 035276 18 SIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG 51 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~ 51 (69)
......++|.|||+.+++-...+.|++++..++.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc
Confidence 3456789999999988877668889988765543
No 248
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=76.80 E-value=5.1 Score=25.84 Aligned_cols=28 Identities=25% Similarity=0.151 Sum_probs=23.2
Q ss_pred CCCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 29 DGITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 29 ~~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
.+..++.++.|+.++.||.++|+.+..+
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 4567777899999999999999887655
No 249
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=76.52 E-value=4.4 Score=25.77 Aligned_cols=29 Identities=17% Similarity=0.060 Sum_probs=23.6
Q ss_pred CCCEEEEecCCCcEEEEECCCCCccEEec
Q 035276 29 DGITVFSGGCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 29 ~~~~l~s~~~d~~v~iwd~~t~~~~~~~~ 57 (69)
.+..++.++.|+.+..+|..+|+.+..+.
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 35677788999999999999988776553
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=76.46 E-value=5 Score=25.98 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=25.4
Q ss_pred ECCCCCEEEEecCCCcEEEEECCCCCccEEec
Q 035276 26 LKDDGITVFSGGCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 26 ~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~ 57 (69)
+...+..++.+..|+.++.||..+|+.+..+.
T Consensus 465 ~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 465 LSTAGNLVFQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eEeCCCEEEEECCcccchhhhhhcChhheEec
Confidence 33457778888999999999999988766553
No 251
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=76.45 E-value=8.4 Score=21.94 Aligned_cols=31 Identities=6% Similarity=-0.117 Sum_probs=24.6
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEECCC
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWPLLS 49 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t 49 (69)
.....++|+++++.+++...++.|..||...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g 62 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG 62 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC
Confidence 4467889999999767766788999998764
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=75.01 E-value=7.2 Score=25.53 Aligned_cols=29 Identities=14% Similarity=-0.068 Sum_probs=21.2
Q ss_pred EEEECCCCCEEEEecCC-----CcEEEEECCCCC
Q 035276 23 CSTLKDDGITVFSGGCD-----KQVKTWPLLSGG 51 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~~d-----~~v~iwd~~t~~ 51 (69)
.++|+|||+.|+....| ..|.++++.++.
T Consensus 225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~ 258 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQ 258 (751)
T ss_dssp CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCG
T ss_pred eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCc
Confidence 47899999887665554 368888887653
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=74.33 E-value=3.4 Score=23.80 Aligned_cols=31 Identities=10% Similarity=0.031 Sum_probs=21.9
Q ss_pred ECCCCCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 26 LKDDGITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 26 ~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
+++|++.|+.+..+..|.++|.++.+....+
T Consensus 110 lt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I 140 (243)
T 3mbr_X 110 LTSDDSHLYMSDGTAVIRKLDPDTLQQVGSI 140 (243)
T ss_dssp EEECSSCEEEECSSSEEEEECTTTCCEEEEE
T ss_pred EeeCCCEEEEECCCCeEEEEeCCCCeEEEEE
Confidence 3356777766667888999999886655444
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=73.25 E-value=3.5 Score=24.22 Aligned_cols=30 Identities=3% Similarity=-0.348 Sum_probs=22.3
Q ss_pred CCCCCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 27 KDDGITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 27 s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
++|++.|+.+..+..|.++|.++.+....+
T Consensus 142 t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I 171 (268)
T 3nok_A 142 CYWNGKLVRSDGGTMLTFHEPDGFALVGAV 171 (268)
T ss_dssp EEETTEEEEECSSSEEEEECTTTCCEEEEE
T ss_pred ecCCCEEEEECCCCEEEEEcCCCCeEEEEE
Confidence 356788877777889999998887665444
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=73.06 E-value=9.7 Score=21.05 Aligned_cols=31 Identities=10% Similarity=0.128 Sum_probs=23.0
Q ss_pred eEEEEECCCCCEEE-EecCCCcEEEEECCCCC
Q 035276 21 VLCSTLKDDGITVF-SGGCDKQVKTWPLLSGG 51 (69)
Q Consensus 21 v~~~~~s~~~~~l~-s~~~d~~v~iwd~~t~~ 51 (69)
+..++|+++++.|+ +...++.|.++|...+.
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 69 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGE 69 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCC
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCC
Confidence 46789999777665 44567899999987643
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=70.34 E-value=9 Score=23.39 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=28.6
Q ss_pred CeEEEEECC-CCCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 20 EVLCSTLKD-DGITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 20 ~v~~~~~s~-~~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
.+..++++| ++..|+.+...+.|+.+|+.++ .+..+.........++|
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-~v~~~~~~~~~P~~ia~ 186 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-YVSTVYSGLSKVRTICW 186 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT-EEEEEECCCSCEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC-EEEEEecCCCCcceEEE
Confidence 346789998 4666766655478999998764 33333223333444443
No 257
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=69.83 E-value=10 Score=21.97 Aligned_cols=27 Identities=7% Similarity=-0.027 Sum_probs=21.7
Q ss_pred CCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 30 GITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 30 ~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
+..|+.+..++.+.++|..+++.+...
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 567888889999999999998765444
No 258
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=69.17 E-value=14 Score=22.91 Aligned_cols=33 Identities=9% Similarity=-0.065 Sum_probs=24.1
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEECCCCC
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG 51 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~ 51 (69)
.....++|.|+|+.+++-...+.|.+++..++.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGS 59 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc
Confidence 346789999999987776555568888765443
No 259
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=68.54 E-value=10 Score=22.47 Aligned_cols=27 Identities=7% Similarity=0.172 Sum_probs=20.9
Q ss_pred CeEEEEECCCCC-EEEEecCCCcEEEEEC
Q 035276 20 EVLCSTLKDDGI-TVFSGGCDKQVKTWPL 47 (69)
Q Consensus 20 ~v~~~~~s~~~~-~l~s~~~d~~v~iwd~ 47 (69)
....++|.|+|+ .+++ ...+.|++++.
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~ 46 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQA 46 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEET
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeC
Confidence 457899999999 5554 45688998884
No 260
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=66.65 E-value=4.6 Score=23.59 Aligned_cols=31 Identities=6% Similarity=-0.085 Sum_probs=20.7
Q ss_pred ECCCCCEEEEecCCCcEEEEECCCCCccEEe
Q 035276 26 LKDDGITVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 26 ~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
+++|++.|+.+..+..|.++|..+.+....+
T Consensus 132 lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I 162 (262)
T 3nol_A 132 LTHNDQYLIMSDGTPVLRFLDPESLTPVRTI 162 (262)
T ss_dssp EEECSSCEEECCSSSEEEEECTTTCSEEEEE
T ss_pred EecCCCEEEEECCCCeEEEEcCCCCeEEEEE
Confidence 3356777766666777888888876655443
No 261
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=64.95 E-value=12 Score=24.35 Aligned_cols=35 Identities=6% Similarity=-0.087 Sum_probs=28.2
Q ss_pred EEEECCCCCEEEEecCCCc-------------------EEEEECCCCCccEEec
Q 035276 23 CSTLKDDGITVFSGGCDKQ-------------------VKTWPLLSGGQPVIVA 57 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~~d~~-------------------v~iwd~~t~~~~~~~~ 57 (69)
.++++|+...|+.+..++. |..+|..+|+.+..++
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~ 292 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQ 292 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeee
Confidence 4689999899998887753 9999999998765553
No 262
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=61.73 E-value=26 Score=21.70 Aligned_cols=25 Identities=12% Similarity=-0.071 Sum_probs=17.0
Q ss_pred CCeEEEEECCCCC-EEEEecCCCcEE
Q 035276 19 IEVLCSTLKDDGI-TVFSGGCDKQVK 43 (69)
Q Consensus 19 ~~v~~~~~s~~~~-~l~s~~~d~~v~ 43 (69)
.++.++++.|||. ..++-...+.+.
T Consensus 405 ~R~~dv~~gpDG~~Lyv~~d~~G~i~ 430 (454)
T 1cru_A 405 NRYRDVIASPDGNVLYVLTDTAGNVQ 430 (454)
T ss_dssp SCEEEEEECTTSSCEEEEECSSCCEE
T ss_pred CCceeEEECCCCCEEEEEECCCCCCc
Confidence 5788999999997 555444445433
No 263
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=61.72 E-value=16 Score=22.09 Aligned_cols=29 Identities=7% Similarity=0.068 Sum_probs=24.5
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEECCC
Q 035276 21 VLCSTLKDDGITVFSGGCDKQVKTWPLLS 49 (69)
Q Consensus 21 v~~~~~s~~~~~l~s~~~d~~v~iwd~~t 49 (69)
...+++.|+|..|+....++.+..+|+..
T Consensus 187 ~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 187 YSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred cceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 45789999999888776699999999875
No 264
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=60.37 E-value=21 Score=21.05 Aligned_cols=27 Identities=7% Similarity=0.065 Sum_probs=20.8
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEE
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWP 46 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd 46 (69)
.....++|.|||+.+++ ..++.|.+++
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~ 57 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR 57 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE
Confidence 34678999999995555 4558899888
No 265
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=56.50 E-value=38 Score=23.87 Aligned_cols=35 Identities=20% Similarity=0.050 Sum_probs=27.3
Q ss_pred CCCeEEEEECCC------CCEEEEecC-CCcEEEEECCCCCc
Q 035276 18 SIEVLCSTLKDD------GITVFSGGC-DKQVKTWPLLSGGQ 52 (69)
Q Consensus 18 ~~~v~~~~~s~~------~~~l~s~~~-d~~v~iwd~~t~~~ 52 (69)
..+|.++++.|. +.+++.|.+ |++++++++.+.+.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~ 594 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFEL 594 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCe
Confidence 457888888864 368888887 99999999986443
No 266
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=55.85 E-value=17 Score=23.64 Aligned_cols=29 Identities=14% Similarity=0.058 Sum_probs=23.7
Q ss_pred CCCEEEEecCCCcEEEEECCCCCccEEec
Q 035276 29 DGITVFSGGCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 29 ~~~~l~s~~~d~~v~iwd~~t~~~~~~~~ 57 (69)
++..|+.+..|+.+..+|..+|+.+..+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 45678888999999999999988765554
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=53.58 E-value=36 Score=20.81 Aligned_cols=48 Identities=4% Similarity=-0.012 Sum_probs=29.1
Q ss_pred CeEEEEECCC--CCEEEEecCCCcEEEEECCCCCccEEeccCCCcEEEEEe
Q 035276 20 EVLCSTLKDD--GITVFSGGCDKQVKTWPLLSGGQPVIVAMHDAPIKTIRL 68 (69)
Q Consensus 20 ~v~~~~~s~~--~~~l~s~~~d~~v~iwd~~t~~~~~~~~~h~~~i~~v~~ 68 (69)
....++|+|+ ...|+.+...+.|+.+|..++. +..+.........+++
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~-v~~~~~~~~~P~giav 189 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY-VDIKTTNIGQCADVNF 189 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTE-EEEECCCCSCEEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCE-EEEeecCCCCccEEEE
Confidence 4568899995 4556655444889999987753 3333333333444444
No 268
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=51.98 E-value=23 Score=22.52 Aligned_cols=28 Identities=7% Similarity=0.140 Sum_probs=23.1
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEE
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKT 44 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~i 44 (69)
...+|.++.++++.++|+.++.++.+++
T Consensus 460 ~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 460 EPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 3568888999999999999988886665
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=51.60 E-value=38 Score=20.59 Aligned_cols=30 Identities=13% Similarity=0.076 Sum_probs=22.3
Q ss_pred eEEEEECC-CCCEEEEecCCCcEEEEECCCC
Q 035276 21 VLCSTLKD-DGITVFSGGCDKQVKTWPLLSG 50 (69)
Q Consensus 21 v~~~~~s~-~~~~l~s~~~d~~v~iwd~~t~ 50 (69)
+..++++| ++...++-..++.|..+|..++
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 45678999 6666666667788999998764
No 270
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=49.25 E-value=21 Score=23.68 Aligned_cols=29 Identities=10% Similarity=0.054 Sum_probs=23.4
Q ss_pred eEEEEECCCCCEEEE-ecCCCcEEEEECCC
Q 035276 21 VLCSTLKDDGITVFS-GGCDKQVKTWPLLS 49 (69)
Q Consensus 21 v~~~~~s~~~~~l~s-~~~d~~v~iwd~~t 49 (69)
...+..+|||++++. +..+.++.++|++.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k 354 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDK 354 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeeh
Confidence 346789999999855 55889999999873
No 271
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=49.10 E-value=20 Score=20.07 Aligned_cols=31 Identities=16% Similarity=0.257 Sum_probs=19.4
Q ss_pred EEEECCCCCEEEEecCCCcEEEEECCCCCccEE
Q 035276 23 CSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVI 55 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~ 55 (69)
++...+++. |+.+..++.+..+|.. ++....
T Consensus 141 ~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~ 171 (330)
T 3hxj_A 141 TPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWR 171 (330)
T ss_dssp CCEECTTSC-EEEECTTSEEEEECTT-SCEEEE
T ss_pred eeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEE
Confidence 344555665 5556777788888877 554433
No 272
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=47.69 E-value=30 Score=22.45 Aligned_cols=35 Identities=6% Similarity=-0.043 Sum_probs=27.1
Q ss_pred EEEECCCCCEEEEecCCC-------------------cEEEEECCCCCccEEec
Q 035276 23 CSTLKDDGITVFSGGCDK-------------------QVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~~d~-------------------~v~iwd~~t~~~~~~~~ 57 (69)
..+++++...++.+..++ .|..+|..+|+....++
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~ 287 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQ 287 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEee
Confidence 468888888888887765 39999999988765543
No 273
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=47.00 E-value=24 Score=22.08 Aligned_cols=29 Identities=17% Similarity=0.075 Sum_probs=21.2
Q ss_pred CeEEEEECCCCC-EEEEecCCCcEEEEECC
Q 035276 20 EVLCSTLKDDGI-TVFSGGCDKQVKTWPLL 48 (69)
Q Consensus 20 ~v~~~~~s~~~~-~l~s~~~d~~v~iwd~~ 48 (69)
..+.++|.||+. .|+.+-..+.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 457899999985 44445567889998753
No 274
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=46.71 E-value=29 Score=23.06 Aligned_cols=32 Identities=13% Similarity=0.227 Sum_probs=25.4
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEECC
Q 035276 16 NKSIEVLCSTLKDDGITVFSGGCDKQVKTWPLL 48 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~ 48 (69)
....+|.++.++++.++|+.++.++.+++ .+.
T Consensus 467 ~~~~pI~~L~ld~~~~~LYV~t~~~V~kV-Pl~ 498 (667)
T 4gz8_A 467 REPTTISAMELSTKQQQLYIGSTAGVAQL-PLH 498 (667)
T ss_dssp SSCCCCCEEEEETTTTEEEEEBSSCEEEE-ESC
T ss_pred CCCceeeeEEEcCCCCEEEEEECCEEEEE-Ehh
Confidence 45667889999999999999998886665 553
No 275
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=46.01 E-value=22 Score=21.05 Aligned_cols=27 Identities=4% Similarity=-0.152 Sum_probs=20.4
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEE
Q 035276 19 IEVLCSTLKDDGITVFSGGCDKQVKTWP 46 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~d~~v~iwd 46 (69)
.....++|.|||+.+++ -.++.|+++|
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d 55 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS 55 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe
Confidence 44678999999985554 4558898887
No 276
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=44.99 E-value=38 Score=18.59 Aligned_cols=31 Identities=3% Similarity=-0.072 Sum_probs=21.9
Q ss_pred CCeEEEEECCCCCEEEEecC---CCcEEEEECCC
Q 035276 19 IEVLCSTLKDDGITVFSGGC---DKQVKTWPLLS 49 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~s~~~---d~~v~iwd~~t 49 (69)
.....++++|++..|+.+.. .+.|..+++..
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 34678999998777765543 36788888754
No 277
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=42.96 E-value=45 Score=21.33 Aligned_cols=29 Identities=10% Similarity=-0.034 Sum_probs=22.6
Q ss_pred CCCC---EEEEecCCCcEEEEECCCCCccEEe
Q 035276 28 DDGI---TVFSGGCDKQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 28 ~~~~---~l~s~~~d~~v~iwd~~t~~~~~~~ 56 (69)
.+|+ .++.++.++.+.++|..+|+.+..+
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence 4564 5777889999999999998876544
No 278
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=42.36 E-value=59 Score=20.11 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=25.7
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCCccEE
Q 035276 22 LCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVI 55 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~ 55 (69)
..+..++.-..++.-.--|-+.+||++++.++..
T Consensus 263 Vamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 263 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 4555666666676667788999999999988654
No 279
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=41.46 E-value=5.9 Score=25.35 Aligned_cols=18 Identities=22% Similarity=0.466 Sum_probs=11.9
Q ss_pred EecCCCcEEEEECCCCCc
Q 035276 35 SGGCDKQVKTWPLLSGGQ 52 (69)
Q Consensus 35 s~~~d~~v~iwd~~t~~~ 52 (69)
.+..+|.|++||+.....
T Consensus 162 ~~~~~GVVrvWDVkd~sl 179 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAEL 179 (577)
T ss_dssp ----CCEECSEECSCGGG
T ss_pred CCCCCCeEEEEecCCHHH
Confidence 467799999999987544
No 280
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=40.96 E-value=19 Score=23.88 Aligned_cols=30 Identities=10% Similarity=0.088 Sum_probs=21.0
Q ss_pred EEE-ECCCCCEEEEe----c-CCCcEEEEECCCCCc
Q 035276 23 CST-LKDDGITVFSG----G-CDKQVKTWPLLSGGQ 52 (69)
Q Consensus 23 ~~~-~s~~~~~l~s~----~-~d~~v~iwd~~t~~~ 52 (69)
.+. ++|++++++.+ + ....++++|+.+++.
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~ 168 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDF 168 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEE
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCc
Confidence 455 99999986542 2 234899999998643
No 281
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=39.58 E-value=41 Score=21.56 Aligned_cols=28 Identities=21% Similarity=0.324 Sum_probs=21.7
Q ss_pred EEEECCCCCEEEEec-CCCcEEEEECCCC
Q 035276 23 CSTLKDDGITVFSGG-CDKQVKTWPLLSG 50 (69)
Q Consensus 23 ~~~~s~~~~~l~s~~-~d~~v~iwd~~t~ 50 (69)
.+++..+++.++.|+ .+..+.+||..+.
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGT
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCC
Confidence 356778899888888 4568999998763
No 282
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=37.70 E-value=45 Score=20.05 Aligned_cols=27 Identities=4% Similarity=-0.043 Sum_probs=20.1
Q ss_pred CEEEEecCCCcEEEEECCCCCccEEec
Q 035276 31 ITVFSGGCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 31 ~~l~s~~~d~~v~iwd~~t~~~~~~~~ 57 (69)
..++.++.||.|.-.|.++|+..-.+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~ 37 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIE 37 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 457778888888888888877655543
No 283
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=35.55 E-value=32 Score=17.16 Aligned_cols=17 Identities=12% Similarity=0.028 Sum_probs=13.6
Q ss_pred CcEEEEECCCCCccEEe
Q 035276 40 KQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 40 ~~v~iwd~~t~~~~~~~ 56 (69)
-+|.+||+..|.++.++
T Consensus 17 E~V~IvNvnNG~RfeTY 33 (97)
T 1uhe_A 17 MKVEIVDVNNGERFSTY 33 (97)
T ss_dssp CEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCceEEEE
Confidence 47999999998887553
No 284
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=34.50 E-value=34 Score=17.02 Aligned_cols=17 Identities=18% Similarity=0.346 Sum_probs=13.5
Q ss_pred CcEEEEECCCCCccEEe
Q 035276 40 KQVKTWPLLSGGQPVIV 56 (69)
Q Consensus 40 ~~v~iwd~~t~~~~~~~ 56 (69)
-+|++||+..|.++.++
T Consensus 18 E~V~IvNvnNG~Rf~TY 34 (96)
T 1vc3_B 18 EQVDIYDITNGARLTTY 34 (96)
T ss_dssp CEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCceEEEE
Confidence 47999999998886543
No 285
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=33.75 E-value=35 Score=17.17 Aligned_cols=16 Identities=13% Similarity=0.129 Sum_probs=13.1
Q ss_pred CcEEEEECCCCCccEE
Q 035276 40 KQVKTWPLLSGGQPVI 55 (69)
Q Consensus 40 ~~v~iwd~~t~~~~~~ 55 (69)
-+|++||+..|.++.+
T Consensus 18 E~V~I~NvnNG~Rf~T 33 (102)
T 3plx_B 18 EKVQVVNVNNGARFET 33 (102)
T ss_dssp CEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCcEEEE
Confidence 4799999999888654
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=33.00 E-value=96 Score=19.77 Aligned_cols=29 Identities=3% Similarity=-0.175 Sum_probs=21.3
Q ss_pred CCeEEEEECCCCCEEE-EecCCCcEEEEEC
Q 035276 19 IEVLCSTLKDDGITVF-SGGCDKQVKTWPL 47 (69)
Q Consensus 19 ~~v~~~~~s~~~~~l~-s~~~d~~v~iwd~ 47 (69)
.....++|+|+|+.|+ +-.....|+.+|.
T Consensus 310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 3457899999999654 4456778888665
No 287
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=32.01 E-value=50 Score=18.48 Aligned_cols=36 Identities=11% Similarity=0.003 Sum_probs=26.4
Q ss_pred CCCCCeEEEEECCCCC-EEEEecCCCcEEEEECCCCC
Q 035276 16 NKSIEVLCSTLKDDGI-TVFSGGCDKQVKTWPLLSGG 51 (69)
Q Consensus 16 ~~~~~v~~~~~s~~~~-~l~s~~~d~~v~iwd~~t~~ 51 (69)
.+..-++++-|...+. .+.+.+.++++.++|-+=|+
T Consensus 116 ~g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 116 SGRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp TTCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CCCceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 3355577888987654 46777789999999987653
No 288
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=31.80 E-value=45 Score=21.96 Aligned_cols=20 Identities=30% Similarity=0.303 Sum_probs=15.7
Q ss_pred CCCeEEEEECCCCCEEEEec
Q 035276 18 SIEVLCSTLKDDGITVFSGG 37 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~ 37 (69)
..++..++|+||++.|+.+-
T Consensus 530 ~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 530 GCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp TCEEEEEEECTTSSEEEEEE
T ss_pred CccccCCEECCCCCEEEEEE
Confidence 34578899999999987753
No 289
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=30.65 E-value=84 Score=18.39 Aligned_cols=30 Identities=10% Similarity=-0.099 Sum_probs=22.6
Q ss_pred CeEEEEECCCCCEEEEe-cCCCcEEEEECCC
Q 035276 20 EVLCSTLKDDGITVFSG-GCDKQVKTWPLLS 49 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~-~~d~~v~iwd~~t 49 (69)
....++++|+++.|+.+ ...+.|..+|+..
T Consensus 204 ~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 46789999987777544 4567899999864
No 290
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=30.41 E-value=1.2e+02 Score=19.89 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=25.9
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEECCCCC
Q 035276 18 SIEVLCSTLKDDGITVFSGGCDKQVKTWPLLSGG 51 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~ 51 (69)
...|.++...++++.|..|..++.+.+||..+++
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 3568888888888856667777779999987753
No 291
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=30.15 E-value=43 Score=17.18 Aligned_cols=16 Identities=19% Similarity=0.179 Sum_probs=13.3
Q ss_pred CcEEEEECCCCCccEE
Q 035276 40 KQVKTWPLLSGGQPVI 55 (69)
Q Consensus 40 ~~v~iwd~~t~~~~~~ 55 (69)
-+|++||+..|.++.+
T Consensus 45 E~V~I~NvnNG~Rf~T 60 (114)
T 3oug_A 45 EKVQVVNLNNGERLET 60 (114)
T ss_dssp BEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCceEEE
Confidence 4899999999888654
No 292
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=30.12 E-value=53 Score=21.47 Aligned_cols=19 Identities=32% Similarity=0.398 Sum_probs=15.7
Q ss_pred CCCeEEEEECCCCCEEEEe
Q 035276 18 SIEVLCSTLKDDGITVFSG 36 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~ 36 (69)
.+++..++|+||++.|+..
T Consensus 530 gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 530 GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TCEEEEEEECTTSSEEEEE
T ss_pred CccCcCeeECCCCCEEEEE
Confidence 5678889999999988764
No 293
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=29.54 E-value=61 Score=21.26 Aligned_cols=30 Identities=10% Similarity=0.209 Sum_probs=23.2
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEEEEC
Q 035276 17 KSIEVLCSTLKDDGITVFSGGCDKQVKTWPL 47 (69)
Q Consensus 17 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~ 47 (69)
...+|.++.++++..+|+.++.++.+++ .+
T Consensus 417 ~~~pi~~L~ls~~~~~LyV~s~~~V~qV-Pl 446 (590)
T 3nvq_A 417 RAAAIQTMSLDAERRKLYVSSQWEVSQV-PL 446 (590)
T ss_dssp SCCCCCEEEEETTTTEEEEECSSEEEEE-ET
T ss_pred CCCceeeEEEcCCCCEEEEEecceEEEc-ch
Confidence 4557888999999999998888876665 44
No 294
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=28.49 E-value=97 Score=18.42 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=24.2
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEECCCCCccEEec
Q 035276 20 EVLCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVIVA 57 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~~~ 57 (69)
....+++ .++...++....+.|..+|..+|+....+.
T Consensus 290 ~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 290 HPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp SEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 3566777 344555666777889999976766655543
No 295
>3rd7_A Acyl-COA thioesterase; seattle structur genomics center for infectious disease, ssgcid, hydrolase; 1.95A {Mycobacterium avium}
Probab=28.36 E-value=14 Score=21.48 Aligned_cols=19 Identities=11% Similarity=-0.003 Sum_probs=14.7
Q ss_pred EECCCCCEEEEecCCCcEE
Q 035276 25 TLKDDGITVFSGGCDKQVK 43 (69)
Q Consensus 25 ~~s~~~~~l~s~~~d~~v~ 43 (69)
-|+.+|+.++++..++-++
T Consensus 264 i~~~~G~LVAs~~Qegl~R 282 (286)
T 3rd7_A 264 LYNRSGELVCIATQEGYFA 282 (286)
T ss_dssp EEETTSCEEEEEEEEEEEC
T ss_pred EECCCCCEEEEEEehheee
Confidence 5888888888887777554
No 296
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=28.05 E-value=1e+02 Score=20.44 Aligned_cols=28 Identities=18% Similarity=0.121 Sum_probs=21.7
Q ss_pred CCCCeEEEEECCCC--CEEEEecCCCcEEE
Q 035276 17 KSIEVLCSTLKDDG--ITVFSGGCDKQVKT 44 (69)
Q Consensus 17 ~~~~v~~~~~s~~~--~~l~s~~~d~~v~i 44 (69)
...+|..+.++++. .+|+.++.++.+++
T Consensus 448 ~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 448 DFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp TCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred CCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 35678888899887 88988888876655
No 297
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=27.30 E-value=1.3e+02 Score=19.48 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=26.0
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEECCCCCccEE
Q 035276 22 LCSTLKDDGITVFSGGCDKQVKTWPLLSGGQPVI 55 (69)
Q Consensus 22 ~~~~~s~~~~~l~s~~~d~~v~iwd~~t~~~~~~ 55 (69)
..+..++.-..++.-..-|-+.+||++++.++..
T Consensus 262 vamqvs~kygviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred eEEEecccCCEEEEEecCceEEEEecccceeeee
Confidence 4566666666677677788999999999988654
No 298
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=27.18 E-value=53 Score=17.45 Aligned_cols=17 Identities=24% Similarity=0.245 Sum_probs=13.7
Q ss_pred CCcEEEEECCCCCccEE
Q 035276 39 DKQVKTWPLLSGGQPVI 55 (69)
Q Consensus 39 d~~v~iwd~~t~~~~~~ 55 (69)
.-+|.+||+..|.++.+
T Consensus 41 ~EkV~IvNvnNG~RfeT 57 (139)
T 2c45_A 41 GEQVTIVDIDNGARLVT 57 (139)
T ss_dssp SCCEEEEETTTCCEEEE
T ss_pred CCEEEEEECCCCceEEE
Confidence 35899999999888654
No 299
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=26.99 E-value=46 Score=21.36 Aligned_cols=30 Identities=7% Similarity=0.118 Sum_probs=22.3
Q ss_pred CCCeE-EEEECCCCCEEEEecCCCcEEEEECC
Q 035276 18 SIEVL-CSTLKDDGITVFSGGCDKQVKTWPLL 48 (69)
Q Consensus 18 ~~~v~-~~~~s~~~~~l~s~~~d~~v~iwd~~ 48 (69)
..+|. .+.+++++.+|+.++.++.+++ .+.
T Consensus 449 ~~pv~~~l~~~~~~~~Lyv~s~~~V~kv-pl~ 479 (539)
T 3al9_A 449 GSPILRDMAFSINQLYLYVMSERQVTRV-PVE 479 (539)
T ss_dssp CCCCCSCCEECTTSSEEEEECSSEEEEE-ESC
T ss_pred CCccccceEEccCCCeEEEEecccccee-ehh
Confidence 45675 7889999999998888876665 443
No 300
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=26.61 E-value=52 Score=17.57 Aligned_cols=16 Identities=13% Similarity=0.424 Sum_probs=13.3
Q ss_pred CcEEEEECCCCCccEE
Q 035276 40 KQVKTWPLLSGGQPVI 55 (69)
Q Consensus 40 ~~v~iwd~~t~~~~~~ 55 (69)
-+|.+||+..|.++.+
T Consensus 59 EkV~IvNvnNG~RfeT 74 (143)
T 1pqh_A 59 EAIDIWNVTNGKRFST 74 (143)
T ss_dssp CEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCceEEE
Confidence 4899999999888654
No 301
>3u0a_A Acyl-COA thioesterase II TESB2; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, hydrolase; 2.50A {Mycobacterium marinum}
Probab=26.42 E-value=23 Score=20.60 Aligned_cols=20 Identities=10% Similarity=-0.016 Sum_probs=16.5
Q ss_pred EECCCCCEEEEecCCCcEEE
Q 035276 25 TLKDDGITVFSGGCDKQVKT 44 (69)
Q Consensus 25 ~~s~~~~~l~s~~~d~~v~i 44 (69)
-|+.+|+.++++..++.|+.
T Consensus 257 i~~~~G~LVAs~~QeglvR~ 276 (285)
T 3u0a_A 257 IFTQGGELVAAVMQEGLTRY 276 (285)
T ss_dssp EEETTCCEEEEEEEEEEEEC
T ss_pred EECCCCCEEEEEEeeEEEEe
Confidence 58889999998888887765
No 302
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=25.94 E-value=48 Score=19.67 Aligned_cols=23 Identities=13% Similarity=0.199 Sum_probs=13.2
Q ss_pred CCCCCEEEEecCCC-------cEEEEECCC
Q 035276 27 KDDGITVFSGGCDK-------QVKTWPLLS 49 (69)
Q Consensus 27 s~~~~~l~s~~~d~-------~v~iwd~~t 49 (69)
.|.|++|+.|+.++ .|.++...+
T Consensus 43 ~~~~q~~i~~g~~~t~~~~~a~i~~~g~~~ 72 (275)
T 3gw6_A 43 NPAGQRIIFCGGEGTSSTTGAQITLYGANN 72 (275)
T ss_dssp CGGGCEEEEESSSSSSTTSBCEEEEEBSSS
T ss_pred CCCccEEEEecCCCCCCCCccEEEEecCCC
Confidence 34577766655544 556655544
No 303
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=23.37 E-value=58 Score=21.28 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=23.0
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEEC
Q 035276 18 SIEVLCSTLKDDGITVFSGGCDKQVKTWPL 47 (69)
Q Consensus 18 ~~~v~~~~~s~~~~~l~s~~~d~~v~iwd~ 47 (69)
..+|..+.++++.+.|+.++.++.+++ .+
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qV-Pl 497 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKV-PL 497 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEE-ES
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEe-eh
Confidence 456788999999999999888877666 44
No 304
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=23.28 E-value=1.2e+02 Score=17.61 Aligned_cols=30 Identities=10% Similarity=-0.140 Sum_probs=22.6
Q ss_pred CeEEEEECCCCCEEEEe-cCCCcEEEEECCC
Q 035276 20 EVLCSTLKDDGITVFSG-GCDKQVKTWPLLS 49 (69)
Q Consensus 20 ~v~~~~~s~~~~~l~s~-~~d~~v~iwd~~t 49 (69)
....++++++++.|+.+ ...+.|..+|+..
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 45789999987777554 5567899999864
No 305
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=22.71 E-value=69 Score=16.42 Aligned_cols=12 Identities=8% Similarity=0.036 Sum_probs=9.2
Q ss_pred EEECCCCCEEEE
Q 035276 24 STLKDDGITVFS 35 (69)
Q Consensus 24 ~~~s~~~~~l~s 35 (69)
+.|+++|+.++.
T Consensus 37 I~W~~~G~sFvV 48 (125)
T 2ldu_A 37 ICWSPSGNSFHV 48 (125)
T ss_dssp EEECTTSSEEEE
T ss_pred EEEcCCCCEEEE
Confidence 689999986653
Done!