BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035282
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6TAW2|SERP2_MOUSE Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus
GN=Serp2 PE=3 SV=2
Length = 65
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 12 NARFQKNVTRRGSVPESSAKKGSDYPIGPILLGFFVFVVLGSSLFQIIRT 61
N + KN+T+RG+V ++ + YP+GP LL FVFVV GS++FQII++
Sbjct: 11 NEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQS 60
>sp|Q8N6R1|SERP2_HUMAN Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens
GN=SERP2 PE=2 SV=1
Length = 65
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 12 NARFQKNVTRRGSVPESSAKKGSDYPIGPILLGFFVFVVLGSSLFQIIRT 61
N + KN+T+RG+V ++ + YP+GP LL FVFVV GS++FQII++
Sbjct: 11 NEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQS 60
>sp|Q3T073|SERP2_BOVIN Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus
GN=SERP2 PE=3 SV=1
Length = 65
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 12 NARFQKNVTRRGSVPESSAKKGSDYPIGPILLGFFVFVVLGSSLFQIIRT 61
N + KN+T+RG+V ++ + YP+GP LL FVFVV GS++FQII++
Sbjct: 11 NEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQS 60
>sp|Q5REZ1|SERP1_PONAB Stress-associated endoplasmic reticulum protein 1 OS=Pongo abelii
GN=SERP1 PE=3 SV=1
Length = 66
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 12 NARFQKNVTRRGSVPESSAKK-GSDYPIGPILLGFFVFVVLGSSLFQIIRT 61
N + KN+T+RG+V ++S G +GP LL F+FVV GS++FQII++
Sbjct: 11 NEKHSKNITQRGNVAKTSRNAPGEKASVGPWLLALFIFVVCGSAIFQIIQS 61
>sp|Q9R2C1|SERP1_RAT Stress-associated endoplasmic reticulum protein 1 OS=Rattus
norvegicus GN=Serp1 PE=1 SV=2
Length = 66
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 12 NARFQKNVTRRGSVPESSAKKGSDYP-IGPILLGFFVFVVLGSSLFQIIRT 61
N + KN+T+RG+V ++S + +GP LL F+FVV GS++FQII++
Sbjct: 11 NEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQS 61
>sp|Q9Z1W5|SERP1_MOUSE Stress-associated endoplasmic reticulum protein 1 OS=Mus musculus
GN=Serp1 PE=3 SV=1
Length = 66
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 12 NARFQKNVTRRGSVPESSAKKGSDYP-IGPILLGFFVFVVLGSSLFQIIRT 61
N + KN+T+RG+V ++S + +GP LL F+FVV GS++FQII++
Sbjct: 11 NEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQS 61
>sp|Q9Y6X1|SERP1_HUMAN Stress-associated endoplasmic reticulum protein 1 OS=Homo sapiens
GN=SERP1 PE=2 SV=1
Length = 66
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 12 NARFQKNVTRRGSVPESSAKKGSDYP-IGPILLGFFVFVVLGSSLFQIIRT 61
N + KN+T+RG+V ++S + +GP LL F+FVV GS++FQII++
Sbjct: 11 NEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQS 61
>sp|Q3ZBR1|SERP1_BOVIN Stress-associated endoplasmic reticulum protein 1 OS=Bos taurus
GN=SERP1 PE=3 SV=1
Length = 66
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 12 NARFQKNVTRRGSVPESSAKKGSDYP-IGPILLGFFVFVVLGSSLFQIIRT 61
N + KN+T+RG+V ++S + +GP LL F+FVV GS++FQII++
Sbjct: 11 NEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQS 61
>sp|Q553P6|SERP_DICDI Probable stress-associated endoplasmic reticulum protein
OS=Dictyostelium discoideum GN=serp PE=2 SV=1
Length = 59
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 1 MTTSKRLAERKNARFQKNVTRRGSVPESSAKKGSDYPIGPILLGFFVFVVLGSSLFQIIR 60
M+ S+ L + K+ ++Q+N+ +RG S KK I P +LGF +FVV+GS+L QI++
Sbjct: 1 MSQSRTLRQ-KSQKYQENIEKRGVA--SPKKKEDGLNINPYVLGFIIFVVVGSTLLQILK 57
>sp|Q9LSS0|LRK17_ARATH L-type lectin-domain containing receptor kinase I.7 OS=Arabidopsis
thaliana GN=LECRK17 PE=1 SV=1
Length = 668
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 4 SKRLAERKNARFQKNVTRRGSVPESSAKKGSDYPIGPILLGFFVFVVLG 52
SK +A N ++++ VP SS KK S P+ +LLG F+VLG
Sbjct: 256 SKSMASLPNI----DISKLPKVPHSSTKKKSTSPVLSVLLGLIAFIVLG 300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,192,398
Number of Sequences: 539616
Number of extensions: 572249
Number of successful extensions: 1263
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1246
Number of HSP's gapped (non-prelim): 12
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)