Query         035282
Match_columns 68
No_of_seqs    108 out of 162
Neff          4.6 
Searched_HMMs 29240
Date          Mon Mar 25 17:33:51 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035282.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035282hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3mk7_C Cytochrome C oxidase, C  76.8     2.4 8.1E-05   29.7   3.5   23   34-56     50-72  (311)
  2 1iij_A ERBB-2 receptor protein  67.9     2.6 8.7E-05   22.0   1.5   24   37-60      9-32  (35)
  3 2jwa_A Receptor tyrosine-prote  64.3     9.5 0.00032   20.6   3.4   24   38-61     14-37  (44)
  4 1pfi_A Major coat protein of P  60.6      12 0.00042   20.4   3.4   26   36-61     20-45  (46)
  5 3ukm_A Potassium channel subfa  60.0     6.9 0.00024   27.9   3.0   21   41-61     16-36  (280)
  6 3um7_A Potassium channel subfa  44.1      18  0.0006   26.1   3.0   20   41-60     35-54  (309)
  7 3ldc_A Calcium-gated potassium  36.7      42  0.0014   18.8   3.4   23   37-59      2-24  (82)
  8 1v54_D Cytochrome C oxidase su  36.7      44  0.0015   21.9   3.8   24   40-63     80-103 (147)
  9 1skh_A Major prion protein 2;   36.1      17 0.00058   18.3   1.3   17   35-53      3-19  (30)
 10 3vmt_A Monofunctional glycosyl  30.4      47  0.0016   23.7   3.4   19   38-56     37-55  (263)
 11 2wfu_B Probable insulin-like p  29.9      21 0.00073   17.2   1.1   15   50-64      5-19  (26)
 12 2y69_D Cytochrome C oxidase su  29.0      69  0.0024   21.5   3.8   24   40-63    102-125 (169)
 13 3j1z_P YIIP, cation efflux fam  27.6      43  0.0015   23.2   2.7   30   37-66     82-111 (306)
 14 1pp9_J Ubiquinol-cytochrome C   26.6      46  0.0016   18.9   2.3   15   45-59     20-34  (62)
 15 3cx5_I Cytochrome B-C1 complex  25.4      33  0.0011   19.6   1.5   15   45-59     16-30  (65)
 16 2lk9_A Bone marrow stromal ant  24.5      65  0.0022   16.6   2.4   19   34-52      3-21  (35)
 17 1z65_A PRPLP, prion-like prote  24.4      39  0.0013   16.9   1.5   12   38-49      5-16  (30)
 18 2l2t_A Receptor tyrosine-prote  22.1   1E+02  0.0034   16.4   3.3   17   44-60     19-35  (44)
 19 3j00_Z Cell division protein F  21.7      67  0.0023   19.4   2.5   15   42-56      4-19  (98)
 20 2lx0_A Membrane fusion protein  21.5      89  0.0031   15.6   2.9   23   38-60      8-30  (32)
 21 2ks1_B Epidermal growth factor  20.0 1.1E+02  0.0038   16.1   3.3   24   37-60     12-36  (44)

No 1  
>3mk7_C Cytochrome C oxidase, CBB3-type, subunit P; TM helices, oxidoreductase; HET: HEM HEC FC6; 3.20A {Pseudomonas stutzeri}
Probab=76.84  E-value=2.4  Score=29.66  Aligned_cols=23  Identities=17%  Similarity=0.254  Sum_probs=19.6

Q ss_pred             CCCCchHHHHHHHHHHHHhHHHH
Q 035282           34 SDYPIGPILLGFFVFVVLGSSLF   56 (68)
Q Consensus        34 ~k~pV~p~~l~lfiFVV~Gs~if   56 (68)
                      -+.|+++||+.+|++.++-+.+.
T Consensus        50 ~~nplp~ww~~~f~~~iv~~~~y   72 (311)
T 3mk7_C           50 YDNPLPRWWFLLFIGTLVFGILY   72 (311)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCChHHHHHHHHHHHHHHHH
Confidence            48899999999999988877654


No 2  
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=67.93  E-value=2.6  Score=21.99  Aligned_cols=24  Identities=21%  Similarity=0.339  Sum_probs=18.5

Q ss_pred             CchHHHHHHHHHHHHhHHHHHHHH
Q 035282           37 PIGPILLGFFVFVVLGSSLFQIIR   60 (68)
Q Consensus        37 pV~p~~l~lfiFVV~Gs~ifeiir   60 (68)
                      .|....+|+|+||++|.+++=.+|
T Consensus         9 sIaagVvglll~vii~l~~~~~iR   32 (35)
T 1iij_A            9 FIIATVVGVLLFLILVVVVGILIK   32 (35)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTHHHH
T ss_pred             EeHHHHHHHHHHHHHHHHhheEEe
Confidence            366677889999999988766554


No 3  
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=64.35  E-value=9.5  Score=20.61  Aligned_cols=24  Identities=29%  Similarity=0.470  Sum_probs=18.5

Q ss_pred             chHHHHHHHHHHHHhHHHHHHHHH
Q 035282           38 IGPILLGFFVFVVLGSSLFQIIRT   61 (68)
Q Consensus        38 V~p~~l~lfiFVV~Gs~ifeiir~   61 (68)
                      |.-..+|++++|+.|.+++=.+|-
T Consensus        14 Ia~~vVGvll~vi~~l~~~~~~RR   37 (44)
T 2jwa_A           14 IISAVVGILLVVVLGVVFGILIKR   37 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhheeh
Confidence            456678889999999888776653


No 4  
>1pfi_A Major coat protein of PF1 virus; complex(viral coat protein/DNA), helical virus; HET: DC; 3.00A {Pseudomonas phage PF1} SCOP: h.1.4.1 PDB: 1ifn_A 1ifm_A* 1pjf_A 1ql1_A 1ql2_A 1zn5_A 2ifm_A 2ifn_A 2klv_A 2ksj_A 2xkm_A 3ifm_A 4ifm_A
Probab=60.63  E-value=12  Score=20.42  Aligned_cols=26  Identities=19%  Similarity=0.545  Sum_probs=23.3

Q ss_pred             CCchHHHHHHHHHHHHhHHHHHHHHH
Q 035282           36 YPIGPILLGFFVFVVLGSSLFQIIRT   61 (68)
Q Consensus        36 ~pV~p~~l~lfiFVV~Gs~ifeiir~   61 (68)
                      +.|+-..+|.++.+.+.|+||-++|.
T Consensus        20 ~si~~~IVGaLvil~VAGLiysm~RK   45 (46)
T 1pfi_A           20 KAIGGYIVGALVILAVAGLIYSMLRK   45 (46)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            46889999999999999999999885


No 5  
>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}
Probab=60.03  E-value=6.9  Score=27.87  Aligned_cols=21  Identities=24%  Similarity=0.833  Sum_probs=16.5

Q ss_pred             HHHHHHHHHHHhHHHHHHHHH
Q 035282           41 ILLGFFVFVVLGSSLFQIIRT   61 (68)
Q Consensus        41 ~~l~lfiFVV~Gs~ifeiir~   61 (68)
                      .++++++++++|+++|+.|..
T Consensus        16 Lil~~~~Yl~~GA~vF~~LE~   36 (280)
T 3ukm_A           16 LVLGYLLYLVFGAVVFSSVEL   36 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhC
Confidence            345568889999999998753


No 6  
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}
Probab=44.06  E-value=18  Score=26.06  Aligned_cols=20  Identities=20%  Similarity=0.527  Sum_probs=15.7

Q ss_pred             HHHHHHHHHHHhHHHHHHHH
Q 035282           41 ILLGFFVFVVLGSSLFQIIR   60 (68)
Q Consensus        41 ~~l~lfiFVV~Gs~ifeiir   60 (68)
                      .++.++.++++|+++|+-|-
T Consensus        35 Ll~~~~~YL~~GA~vF~~LE   54 (309)
T 3um7_A           35 LLALVLLYLVSGALVFRALE   54 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            34567778899999999873


No 7  
>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 4hyo_A 4hz3_D 3r65_A 3ous_A 3ldd_A
Probab=36.72  E-value=42  Score=18.83  Aligned_cols=23  Identities=30%  Similarity=0.564  Sum_probs=18.1

Q ss_pred             CchHHHHHHHHHHHHhHHHHHHH
Q 035282           37 PIGPILLGFFVFVVLGSSLFQII   59 (68)
Q Consensus        37 pV~p~~l~lfiFVV~Gs~ifeii   59 (68)
                      |.....+.++.++++|+.++..+
T Consensus         2 ~~~~~~~l~~~~~~~g~~~~~~~   24 (82)
T 3ldc_A            2 PATRILLLVLAVIIYGTAGFHFI   24 (82)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHH
Confidence            66777888888889999888654


No 8  
>1v54_D Cytochrome C oxidase subunit IV isoform 1; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.1.1 PDB: 1oco_D* 1occ_D* 1ocz_D* 1ocr_D* 1v55_D* 2dyr_D* 2dys_D* 2eij_D* 2eik_D* 2eil_D* 2eim_D* 2ein_D* 2occ_D* 2ybb_O* 2zxw_D* 3abk_D* 3abl_D* 3abm_D* 3ag1_D* 3ag2_D* ...
Probab=36.70  E-value=44  Score=21.93  Aligned_cols=24  Identities=8%  Similarity=0.099  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHH
Q 035282           40 PILLGFFVFVVLGSSLFQIIRTAT   63 (68)
Q Consensus        40 p~~l~lfiFVV~Gs~ifeiir~~~   63 (68)
                      +++.+.|+|+.++.++|-.+|+.-
T Consensus        80 ~v~g~v~~~i~~s~~~f~~~r~~v  103 (147)
T 1v54_D           80 TVVGAAMFFIGFTALLLIWEKHYV  103 (147)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHc
Confidence            366778899999999999998864


No 9  
>1skh_A Major prion protein 2; coil-helix-coil, unknown function; NMR {Bos taurus}
Probab=36.10  E-value=17  Score=18.33  Aligned_cols=17  Identities=35%  Similarity=0.475  Sum_probs=11.0

Q ss_pred             CCCchHHHHHHHHHHHHhH
Q 035282           35 DYPIGPILLGFFVFVVLGS   53 (68)
Q Consensus        35 k~pV~p~~l~lfiFVV~Gs   53 (68)
                      ++++|=|+|.+|  |+-.|
T Consensus         3 k~~~~cwilvLf--va~ws   19 (30)
T 1skh_A            3 KSKIGSWILVLF--VAMWS   19 (30)
T ss_dssp             TTTTTTHHHHHH--HHHHH
T ss_pred             cccccHHHHHHH--HHHHh
Confidence            467888887765  44443


No 10 
>3vmt_A Monofunctional glycosyltransferase; transmembrane, bacterial cell WALL SYNT membrane; HET: LHI; 2.30A {Staphylococcus aureus} PDB: 3vmr_A* 3vms_A 3vmq_A*
Probab=30.41  E-value=47  Score=23.65  Aligned_cols=19  Identities=21%  Similarity=0.366  Sum_probs=7.7

Q ss_pred             chHHHHHHHHHHHHhHHHH
Q 035282           38 IGPILLGFFVFVVLGSSLF   56 (68)
Q Consensus        38 V~p~~l~lfiFVV~Gs~if   56 (68)
                      +-.+.+++++++++++.++
T Consensus        37 ~~~~~~~~l~~~~~~~~~~   55 (263)
T 3vmt_A           37 LLKILLTILIIIALFIGIM   55 (263)
T ss_dssp             TTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            3334444444444444433


No 11 
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=29.89  E-value=21  Score=17.18  Aligned_cols=15  Identities=27%  Similarity=0.567  Sum_probs=12.0

Q ss_pred             HHhHHHHHHHHHHHh
Q 035282           50 VLGSSLFQIIRTATS   64 (68)
Q Consensus        50 V~Gs~ifeiir~~~~   64 (68)
                      +||+.+.|.|..+=.
T Consensus         5 lCG~~L~eaL~~vC~   19 (26)
T 2wfu_B            5 ACGPALMDMLRVACP   19 (26)
T ss_dssp             CCHHHHHHHHHHHCS
T ss_pred             hhhHHHHHHHHHHHh
Confidence            689999998887743


No 12 
>2y69_D Cytochrome C oxidase subunit 4 isoform 1; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=28.95  E-value=69  Score=21.51  Aligned_cols=24  Identities=8%  Similarity=0.099  Sum_probs=19.8

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHH
Q 035282           40 PILLGFFVFVVLGSSLFQIIRTAT   63 (68)
Q Consensus        40 p~~l~lfiFVV~Gs~ifeiir~~~   63 (68)
                      +++.+.|+|+.++.++|-.+|..-
T Consensus       102 ~V~ggv~~~i~~s~~~f~~~r~~v  125 (169)
T 2y69_D          102 TVVGAAMFFIGFTALLLIWEKHYV  125 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHc
Confidence            366778899999999999988764


No 13 
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=27.60  E-value=43  Score=23.16  Aligned_cols=30  Identities=13%  Similarity=0.052  Sum_probs=23.4

Q ss_pred             CchHHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 035282           37 PIGPILLGFFVFVVLGSSLFQIIRTATSRG   66 (68)
Q Consensus        37 pV~p~~l~lfiFVV~Gs~ifeiir~~~~~~   66 (68)
                      +++-...++++|++++..++|-++.+.++.
T Consensus        82 ~l~al~~~~~l~~~~~~i~~eai~~l~~p~  111 (306)
T 3j1z_P           82 PLAALAQSAFIMGSAFLLLFYGGERLLNPS  111 (306)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTTTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhheecCC
Confidence            456778888999999999988777766554


No 14 
>1pp9_J Ubiquinol-cytochrome C reductase complex 7.2 kDa; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.23.14.1 PDB: 1bgy_J* 1be3_J* 1l0n_J* 1ntk_J* 1ntm_J* 1ntz_J* 1nu1_J* 1l0l_J* 1ppj_J* 1sqb_J* 1sqp_J* 1sqq_J* 1sqv_J* 1sqx_J* 2a06_J* 2fyu_J* 2ybb_J* 1bcc_J* 2bcc_J* 3bcc_J* ...
Probab=26.63  E-value=46  Score=18.88  Aligned_cols=15  Identities=27%  Similarity=0.571  Sum_probs=11.8

Q ss_pred             HHHHHHHhHHHHHHH
Q 035282           45 FFVFVVLGSSLFQII   59 (68)
Q Consensus        45 lfiFVV~Gs~ifeii   59 (68)
                      ++.++++|+.+||..
T Consensus        20 y~~~i~~gaf~fe~~   34 (62)
T 1pp9_J           20 FALTIVVGALFFERA   34 (62)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            567888899999864


No 15 
>3cx5_I Cytochrome B-C1 complex subunit 9; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.23.14.1 PDB: 3cxh_I* 2ibz_I* 1kyo_I* 1ezv_I* 1kb9_I* 1p84_I*
Probab=25.43  E-value=33  Score=19.65  Aligned_cols=15  Identities=27%  Similarity=0.501  Sum_probs=11.1

Q ss_pred             HHHHHHHhHHHHHHH
Q 035282           45 FFVFVVLGSSLFQII   59 (68)
Q Consensus        45 lfiFVV~Gs~ifeii   59 (68)
                      ++.++++|+.+||..
T Consensus        16 y~~~I~~gaf~fE~~   30 (65)
T 3cx5_I           16 FVGTIFAGAFVFQTV   30 (65)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            356788888888854


No 16 
>2lk9_A Bone marrow stromal antigen 2; membrane, micelle, antiviral protein-immune system complex; NMR {Homo sapiens}
Probab=24.45  E-value=65  Score=16.61  Aligned_cols=19  Identities=32%  Similarity=0.551  Sum_probs=12.1

Q ss_pred             CCCCchHHHHHHHHHHHHh
Q 035282           34 SDYPIGPILLGFFVFVVLG   52 (68)
Q Consensus        34 ~k~pV~p~~l~lfiFVV~G   52 (68)
                      -|.|+|...+.+++-|..|
T Consensus         3 cKL~lg~Gvl~LLviV~Lg   21 (35)
T 2lk9_A            3 SKLLLGIGILVLLIIVILG   21 (35)
T ss_dssp             --CHHHHHHHHHHHHHHHH
T ss_pred             ceeeecccHHHHHHHHHhc
Confidence            3678888777777766544


No 17 
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=24.35  E-value=39  Score=16.95  Aligned_cols=12  Identities=8%  Similarity=0.437  Sum_probs=8.4

Q ss_pred             chHHHHHHHHHH
Q 035282           38 IGPILLGFFVFV   49 (68)
Q Consensus        38 V~p~~l~lfiFV   49 (68)
                      +|-|||+++.-+
T Consensus         5 LG~~wlai~c~L   16 (30)
T 1z65_A            5 LGTWWVAILCML   16 (30)
T ss_dssp             CSSHHHHHHHHH
T ss_pred             hhhhHHHHHHHH
Confidence            677898876543


No 18 
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=22.08  E-value=1e+02  Score=16.37  Aligned_cols=17  Identities=29%  Similarity=0.790  Sum_probs=12.1

Q ss_pred             HHHHHHHHhHHHHHHHH
Q 035282           44 GFFVFVVLGSSLFQIIR   60 (68)
Q Consensus        44 ~lfiFVV~Gs~ifeiir   60 (68)
                      |++++++++.+++=++|
T Consensus        19 Gv~~v~ii~~~~~~~~R   35 (44)
T 2l2t_A           19 GLFILVIVGLTFAVYVR   35 (44)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            47778888877776655


No 19 
>3j00_Z Cell division protein FTSQ, ingrowth of WALL at septum; ribonucleoprotein, nucleotide-binding, PR biosynthesis, translation, zinc-finger, 70S ribosome, ribos translocon; HET: PEV PGV; 7.10A {Escherichia coli O157}
Probab=21.67  E-value=67  Score=19.36  Aligned_cols=15  Identities=40%  Similarity=0.713  Sum_probs=6.7

Q ss_pred             HHHH-HHHHHHhHHHH
Q 035282           42 LLGF-FVFVVLGSSLF   56 (68)
Q Consensus        42 ~l~l-fiFVV~Gs~if   56 (68)
                      |+|+ |.++|+++.++
T Consensus         4 ~~G~~F~l~Vl~~l~~   19 (98)
T 3j00_Z            4 LAGILFLLTVLTTVLV   19 (98)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             echhhHHHHHHHHHHH
Confidence            3444 44444444443


No 20 
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=21.49  E-value=89  Score=15.57  Aligned_cols=23  Identities=22%  Similarity=0.467  Sum_probs=16.9

Q ss_pred             chHHHHHHHHHHHHhHHHHHHHH
Q 035282           38 IGPILLGFFVFVVLGSSLFQIIR   60 (68)
Q Consensus        38 V~p~~l~lfiFVV~Gs~ifeiir   60 (68)
                      |-..+++++-|+-+|=-+|.-++
T Consensus         8 viaglvalltflafgfwlfkylq   30 (32)
T 2lx0_A            8 VIAGLVALLTFLAFGFWLFKYLQ   30 (32)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            34567788899999988876553


No 21 
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=20.01  E-value=1.1e+02  Score=16.09  Aligned_cols=24  Identities=13%  Similarity=0.326  Sum_probs=15.7

Q ss_pred             CchHHHH-HHHHHHHHhHHHHHHHH
Q 035282           37 PIGPILL-GFFVFVVLGSSLFQIIR   60 (68)
Q Consensus        37 pV~p~~l-~lfiFVV~Gs~ifeiir   60 (68)
                      .|--..+ |++++++++.+++=++|
T Consensus        12 ~IA~gVVgGv~~~~ii~~~~~~~~R   36 (44)
T 2ks1_B           12 SIATGMVGALLLLLVVALGIGLFMR   36 (44)
T ss_dssp             SSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEeehhHHHHHHHHHHHHHHHHhh
Confidence            3444444 48888888877776655


Done!