BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035301
(68 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/56 (100%), Positives = 56/56 (100%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/56 (100%), Positives = 56/56 (100%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/56 (98%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a;
AltName: Full=Ras-related protein Rab11C;
Short=AtRab11C; Flags: Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/56 (98%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/56 (98%), Positives = 56/56 (100%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARRA+EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/56 (98%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/56 (98%), Positives = 56/56 (100%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARRA+EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/56 (98%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/56 (96%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR DEEYDYLFKVVLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/56 (96%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR +EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRPEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/56 (94%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/56 (94%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/56 (94%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRT+QV
Sbjct: 1 MARRTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQV 56
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/56 (94%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR +EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL+V
Sbjct: 1 MARRGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEV 56
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/56 (92%), Positives = 54/56 (96%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MARR +EEYDYLFKVVLIGDSGVGKSNL SRFTRNEFCLESKSTIGVEFATRTL+V
Sbjct: 1 MARRGEEEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEV 56
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA +AD+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR++QV
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV 56
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MAR+ D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRT+QV
Sbjct: 1 MARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQV 56
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA +AD+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR++QV
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV 56
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MAR+ D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRT+QV
Sbjct: 1 MARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQV 56
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA +AD+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR++QV
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV 56
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA +AD+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR++QV
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV 56
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine
max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine
max]
Length = 216
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 55/56 (98%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA +AD+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR++QV
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV 56
>gi|357123588|ref|XP_003563492.1| PREDICTED: ras-related protein RABA2b-like [Brachypodium
distachyon]
Length = 183
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ+
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ+
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK++LIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRVDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ+
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ+
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ+
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ+
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/55 (94%), Positives = 53/55 (96%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RRA+EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL V
Sbjct: 3 GRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHV 57
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/55 (94%), Positives = 53/55 (96%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RRA+EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL V
Sbjct: 3 GRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHV 57
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/54 (96%), Positives = 53/54 (98%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RRA+EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL V
Sbjct: 5 RRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHV 58
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ+
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MANRIDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|414873680|tpg|DAA52237.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 62
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRMDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ+
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFKVVLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAYKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|222629895|gb|EEE62027.1| hypothetical protein OsJ_16809 [Oryza sativa Japonica Group]
Length = 73
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV-TNFSS 61
RRA+EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL V +F S
Sbjct: 5 RRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVCPSFIS 64
Query: 62 F 62
F
Sbjct: 65 F 65
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 52/56 (92%), Positives = 54/56 (96%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRT+QV
Sbjct: 1 MAPRPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQV 56
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VL GDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRVDHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MTHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFKVVLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAFKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT+QV
Sbjct: 1 MAYKVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQV 56
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 54/56 (96%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R +++YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRVEQDYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/56 (91%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRMDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/54 (94%), Positives = 52/54 (96%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R +EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 6 RVGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 59
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCL+SKSTIGVEFATRTLQV
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQV 56
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 54/56 (96%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +AD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR++QV
Sbjct: 1 MNHKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV 56
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c;
AltName: Full=Ras-related protein Rab11A;
Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D+EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QV
Sbjct: 1 MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQV 56
>gi|414873683|tpg|DAA52240.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 61
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/55 (90%), Positives = 52/55 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQ
Sbjct: 1 MAHRMDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ 55
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 54/56 (96%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R +++YDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R + EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATR LQ+
Sbjct: 1 MAHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQI 56
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEF+T+TLQV
Sbjct: 1 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQV 56
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNE CLESKSTIGVEFATRTLQV
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQV 56
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/55 (90%), Positives = 53/55 (96%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
MA RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++Q
Sbjct: 1 MATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ 55
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATRTLQ+
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQI 56
>gi|413948487|gb|AFW81136.1| hypothetical protein ZEAMMB73_478467 [Zea mays]
Length = 114
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 51/56 (91%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R + EYDYLFK+VLIGDSGVGKSN+ SRFTRNEFCLESKSTIGVEFATR LQ+
Sbjct: 1 MAHRVNNEYDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQI 56
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
>gi|413948488|gb|AFW81137.1| hypothetical protein ZEAMMB73_478467 [Zea mays]
Length = 186
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVED 58
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R + EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATR LQ+
Sbjct: 130 MAHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQI 185
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/55 (89%), Positives = 52/55 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
M RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++Q
Sbjct: 1 MGSRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ 55
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/51 (96%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL V
Sbjct: 16 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHV 66
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R DEEYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++Q
Sbjct: 1 MASRVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQA 56
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R+DE+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 1 MAYRSDEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINV 56
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDD 58
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
M+ D+ YDYLFK+VL+GDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRT+++ N
Sbjct: 1 MSGETDDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQN 58
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RAD++YDYLFKVVLIGDSGVGKSNLL+RFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RAD++YDYLFKVVLIGDSGVGKSNLL+RFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RAD++YDYLFKVVLIGDSGVGKSNLL+RFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus
tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus
tauri]
Length = 214
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 54/58 (93%), Gaps = 1/58 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
M+ AD+ YDYLFKVVL+GDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRT+++ N
Sbjct: 1 MSAEADD-YDYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQN 57
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/57 (85%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 53/55 (96%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A RA+++YDYLFK V+IGDSGVGKSNLLSRFT+NEFCLESKSTIGVEFATR+LQV
Sbjct: 8 AYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQV 62
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
R D+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV N
Sbjct: 2 RGKDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDN 57
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 53/55 (96%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A RA+++YDYLFK V+IGDSGVGKSNLLSRFT+NEFCLESKSTIGVEFATR+LQV
Sbjct: 9 AYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQV 63
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 53/55 (96%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A RA+++YDYLFK V+IGDSGVGKSNLLSRFT+NEFCLESKSTIGVEFATR+LQV
Sbjct: 8 AYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQV 62
>gi|315140088|gb|ADT81018.1| GTP-binding protein [Juniperus przewalskii]
gi|315140090|gb|ADT81019.1| GTP-binding protein [Juniperus przewalskii]
gi|315140092|gb|ADT81020.1| GTP-binding protein [Juniperus przewalskii]
gi|315140094|gb|ADT81021.1| GTP-binding protein [Juniperus przewalskii]
gi|315140096|gb|ADT81022.1| GTP-binding protein [Juniperus przewalskii]
gi|315140098|gb|ADT81023.1| GTP-binding protein [Juniperus przewalskii]
gi|383867589|gb|AFH55040.1| GTP-binding protein, partial [Juniperus tibetica]
gi|383867591|gb|AFH55041.1| GTP-binding protein, partial [Juniperus tibetica]
gi|383867593|gb|AFH55042.1| GTP-binding protein, partial [Juniperus tibetica]
gi|383867595|gb|AFH55043.1| GTP-binding protein, partial [Juniperus tibetica]
gi|383867597|gb|AFH55044.1| GTP-binding protein, partial [Juniperus tibetica]
gi|383867599|gb|AFH55045.1| GTP-binding protein, partial [Juniperus tibetica]
gi|383867601|gb|AFH55046.1| GTP-binding protein, partial [Juniperus tibetica]
gi|383867603|gb|AFH55047.1| GTP-binding protein, partial [Juniperus tibetica]
gi|383867605|gb|AFH55048.1| GTP-binding protein, partial [Juniperus tibetica]
gi|383867607|gb|AFH55049.1| GTP-binding protein, partial [Juniperus saltuaria]
gi|383867609|gb|AFH55050.1| GTP-binding protein, partial [Juniperus saltuaria]
gi|383867611|gb|AFH55051.1| GTP-binding protein, partial [Juniperus saltuaria]
gi|383867613|gb|AFH55052.1| GTP-binding protein, partial [Juniperus przewalskii]
gi|383867615|gb|AFH55053.1| GTP-binding protein, partial [Juniperus przewalskii]
Length = 69
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA +AD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 1 MAYKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSISV 56
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M + D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MVPKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQV 56
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 108 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 165
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R+D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 1 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINV 56
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R+D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 1 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINV 56
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis
thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis
thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/55 (87%), Positives = 52/55 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RAD+EYDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L V +
Sbjct: 5 RADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDD 59
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M+ + D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQV 56
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFK VLIGDSGVGKSNLLSRFT+NEFCLESKSTIGVEFATR++QV
Sbjct: 10 RAEDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQV 62
>gi|413954316|gb|AFW86965.1| hypothetical protein ZEAMMB73_420399 [Zea mays]
Length = 142
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+LQV
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQV 58
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV N
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDN 57
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium
distachyon]
Length = 217
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+LQV
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQV 58
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RADE+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+LQV
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQV 58
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+LQV
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQV 58
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/55 (87%), Positives = 53/55 (96%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A RADE+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V
Sbjct: 3 AYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRV 57
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+LQV
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQV 58
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|224034697|gb|ACN36424.1| unknown [Zea mays]
gi|414589340|tpg|DAA39911.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 153
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+LQV
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQV 58
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 133 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 183
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d;
AltName: Full=Ras-related protein Rab11B;
Short=AtRab11B; AltName: Full=Ras-related protein SGBP;
Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/58 (81%), Positives = 54/58 (93%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA RA+++YDYLFKVVLIGDSGVGKSNLL+RFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDD 58
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV 57
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC
30864]
Length = 216
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + +EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MATKDSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 56
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRT++V
Sbjct: 3 KDNDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEV 55
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 100
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 53/55 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV 57
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV 57
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV 57
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV 57
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDV 57
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
M+ R D+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++Q
Sbjct: 1 MSVRPDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQ 55
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/51 (94%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RADE+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDD 59
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+LQV
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV 61
>gi|255647825|gb|ACU24372.1| unknown [Glycine max]
Length = 88
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/55 (87%), Positives = 53/55 (96%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A RADE+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V
Sbjct: 3 AYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRV 57
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV 57
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 501 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 557
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 52/56 (92%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MGNR-DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV 57
>gi|242006346|ref|XP_002424012.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507304|gb|EEB11274.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 130
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MASR-DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV N
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDN 57
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+LQV
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV 61
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 52/56 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 1 MAYKVDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINV 56
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEEYDYLFKVVLIGDSGVGK+NLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 4 DEEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQV 54
>gi|351725553|ref|NP_001235049.1| uncharacterized protein LOC100527366 [Glycine max]
gi|255632183|gb|ACU16451.1| unknown [Glycine max]
Length = 111
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A +AD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+LQV
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV 61
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
R+D+EYDYLFKVVLIGD+GVGKSNLLSRFTRNEF LESKSTIGVEFATR++Q
Sbjct: 3 RSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQ 54
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV 57
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 65 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 115
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+LQV
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV 61
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 52/53 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+LQV
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQV 61
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 51/56 (91%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MGGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 56
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 100
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 52/55 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
M+ + D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++Q
Sbjct: 1 MSHKQDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQ 55
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LE+KSTIGVEFATR+++V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDD 59
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana)
tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana)
tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana)
tropicalis]
Length = 216
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Monodelphis domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine
max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine
max]
Length = 217
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|217069930|gb|ACJ83325.1| unknown [Medicago truncatula]
Length = 108
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/53 (90%), Positives = 51/53 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV N
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDN 57
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
D+EYDYLFKVVLIGDSGVGK+NLLSRFTRNEF LESKSTIGVEFATR++QV N
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDN 56
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis
niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
D+EYDYLFKVVLIGDSGVGK+NLLSRFTRNEF LESKSTIGVEFATR++QV N
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDN 56
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/48 (97%), Positives = 47/48 (97%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL V
Sbjct: 16 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHV 63
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V +
Sbjct: 3 AYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 73
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana)
tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|349802663|gb|AEQ16804.1| hypothetical protein [Pipa carvalhoi]
Length = 123
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis
niloticus]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 73
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 52/55 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
M++ + EEYDYL+K+VLIGDSGVGKSNLLSRFTRNEF LE+KSTIGVEFATRT+Q
Sbjct: 1 MSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQ 55
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 36 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 86
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|413943894|gb|AFW76543.1| hypothetical protein ZEAMMB73_477067 [Zea mays]
Length = 64
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+LQ
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQA 58
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R++++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 1 MAYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINV 56
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R++++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 1 MAYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINV 56
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 53 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 103
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 50/53 (94%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF +ESKSTIGVEFAT+++Q N
Sbjct: 59 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTEN 111
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio
rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio
rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MANR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta
CCMP2712]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 54
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 52/55 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RAD+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFAT++L + N
Sbjct: 5 RADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDN 59
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA R D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MANR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|349804351|gb|AEQ17648.1| putative member ras oncogene protein 1 [Hymenochirus curtipes]
Length = 116
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 54/57 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEEYDYLF+VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/57 (82%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A R D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 39 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 89
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|51593205|gb|AAH78572.1| Rab11b protein [Xenopus laevis]
Length = 91
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|147772737|emb|CAN60629.1| hypothetical protein VITISV_018876 [Vitis vinifera]
Length = 87
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R ++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 3 RTEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|224102889|ref|XP_002334115.1| predicted protein [Populus trichocarpa]
gi|222869605|gb|EEF06736.1| predicted protein [Populus trichocarpa]
Length = 75
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+LQV
Sbjct: 6 REEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQV 58
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MTNREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 53/55 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V +
Sbjct: 28 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 82
>gi|227204275|dbj|BAH56989.1| AT1G06400 [Arabidopsis thaliana]
Length = 97
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RADEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFAT+T +V
Sbjct: 5 RADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKV 57
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 28 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 78
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 53/64 (82%), Gaps = 6/64 (9%)
Query: 1 MARR------ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MARR +EYDYLFKVVLIGDSGVGKSNLLSRFT+N F L+SKSTIGVEFATRTL
Sbjct: 1 MARRPASWEQGGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTL 60
Query: 55 QVTN 58
QV N
Sbjct: 61 QVEN 64
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 50/52 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
R+D+EYDYLFKVVLIGD+GVGKSNLLSRFTRNEF LESKSTIG EFATR++Q
Sbjct: 3 RSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQ 54
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis
niloticus]
Length = 216
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MTNREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT++L +
Sbjct: 5 RADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNI 57
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 51/55 (92%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RAD+EYDYLFKVVLIGDSGVGKSNLLS FT+NEF LESKSTIGVEFATR+L V +
Sbjct: 5 RADDEYDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDD 59
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNV 57
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT++L V
Sbjct: 5 RADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTV 57
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RADEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFAT+T +V
Sbjct: 5 RADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKV 57
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RAD+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT++L V
Sbjct: 5 RADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTV 57
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEEYDYLFKVVLIGDSGVGKSNLL+RFTRNEF LESKSTIGVEFATR+++V
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKV 55
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MTNREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a;
AltName: Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RADEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFAT+T +V
Sbjct: 5 RADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKV 57
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 68 RAEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 120
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
R+D+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++Q
Sbjct: 3 RSDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQ 54
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 52/54 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV N
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDN 55
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV 57
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 52/55 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A RAD++YDYLFK+VLIGDSGVGKSNLLSRFTRNEF +ESKSTIGVEFATR++ V
Sbjct: 3 AYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHV 57
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 1 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 51
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 52/54 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV N
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDN 55
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNV 57
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQV 55
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 52/55 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A RAD++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 3 AYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHV 57
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 52/55 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A RAD++YD+L+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 3 AYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHV 57
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLF+VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 52/55 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RA+EEYDYLFKVVLIGDSGVGKSNLLSRF R+EF LE++STIGVEFAT+T+QV +
Sbjct: 6 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDD 60
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 52/55 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RA+EEYDYLFKVVLIGDSGVGKSNLLSRF R+EF LE++STIGVEFAT+T+QV +
Sbjct: 6 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDD 60
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
ADEEYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++++
Sbjct: 4 ADEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRI 55
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 53/55 (96%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A RA+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V
Sbjct: 3 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRV 57
>gi|339252040|ref|XP_003371243.1| GTP-binding protein Ypt3 [Trichinella spiralis]
gi|316968547|gb|EFV52812.1| GTP-binding protein Ypt3 [Trichinella spiralis]
Length = 330
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESK+TIGVEFATR++QV
Sbjct: 31 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKTTIGVEFATRSIQV 81
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L V
Sbjct: 6 RAEDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNV 58
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 52/55 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A RA+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L +
Sbjct: 3 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNL 57
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 12 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 62
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis
niloticus]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 54
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis
niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 52/54 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV N
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDN 55
>gi|225716714|gb|ACO14203.1| Ras-related protein YPTC6 [Esox lucius]
Length = 138
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 53/57 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A RAD++YDY FKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V +
Sbjct: 3 AYRADDDYDYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT ++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQV 55
>gi|262400949|gb|ACY66377.1| RAB11a member RAS oncogene family [Scylla paramamosain]
Length = 91
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 55
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 51/54 (94%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
++ + EEYDYL+K+VLIGDSGVGKSNLLSRFTRNEF LE+KSTIGVEFATRT+Q
Sbjct: 3 SKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQ 56
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+AD+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT++L +
Sbjct: 5 KADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNI 57
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+AD+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT++L +
Sbjct: 5 KADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNI 57
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL
8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL
8126]
Length = 213
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 52/54 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++Q+ N
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDN 55
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/54 (85%), Positives = 52/54 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
AD+EYD+LFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V N
Sbjct: 3 ADDEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEN 56
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With
Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With
Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With
Fip3
Length = 172
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/50 (92%), Positives = 49/50 (98%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 3 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 52
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA A YDYLFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATRT+QV
Sbjct: 1 MAGEAAVSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQV 56
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 50/53 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFAT+TL V
Sbjct: 5 RTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNV 57
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 55
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b;
AltName: Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R +++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL+V
Sbjct: 5 RVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKV 57
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 55
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R +++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL+V
Sbjct: 5 RVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKV 57
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 55
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 54
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 1 MTNREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHV 55
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIG SGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/51 (90%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDY+FKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3
Rab- Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3
Rab- Binding Domain
Length = 167
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/49 (93%), Positives = 48/49 (97%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 49
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/51 (92%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI
206040]
Length = 212
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 50/52 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
ADE+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LE+KSTIGVEFATR++ V
Sbjct: 3 ADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPV 54
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 50/52 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
ADE+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LE+KSTIGVEFATR++ V
Sbjct: 3 ADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPV 54
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRN+F LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQV 55
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 52/57 (91%), Gaps = 1/57 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVT 57
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V+
Sbjct: 1 MGAREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVS 56
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 40/41 (97%)
Query: 16 VLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 89 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 129
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEEYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++++
Sbjct: 5 DEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRI 55
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|1619855|gb|AAB16973.1| rab11-like, partial [Caenorhabditis elegans]
Length = 127
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISV 55
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/52 (88%), Positives = 50/52 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEEYDYLFKVVLIGDSGVGKSNLL+RFTRNEF LESKSTIGVEFATR+++V
Sbjct: 4 GDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKV 55
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 52/62 (83%), Gaps = 6/62 (9%)
Query: 1 MARRA------DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MARR +EYDYLFK+VLIGDSGVGKSNLLSRFTRN F L+SKSTIGVEFATRT+
Sbjct: 1 MARRPAPWEQGGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTI 60
Query: 55 QV 56
QV
Sbjct: 61 QV 62
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/54 (85%), Positives = 52/54 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV N
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDN 55
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus
oryzae 3.042]
Length = 211
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M DEEYDYLFKVVLIGDSGVGKSNLLSRFTRN+F LE+KSTIGVEFATR++ +
Sbjct: 1 MNNPRDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMI 56
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVV 55
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 1 MGAREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans
JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans
JN3]
Length = 211
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 50/53 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ D+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT++L +
Sbjct: 5 KGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNI 57
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 4 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKV 54
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 1 MGAREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 52/62 (83%), Gaps = 6/62 (9%)
Query: 1 MARRA------DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MARR +EYDYLFKVVLIGDSGVGKSNLLSRFT+N F L+SKSTIGVEFATRT+
Sbjct: 1 MARRPASWEQGGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTI 60
Query: 55 QV 56
QV
Sbjct: 61 QV 62
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYD+LFKVVLIGDSGVGKSNLLSRFTRN+F LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQV 55
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 1 MGAREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 50/53 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+A ++YDYLFKVVL+GDSGVGKSNLLSRFTRN F L+SKSTIGVEFATRT+QV
Sbjct: 11 QAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQV 63
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/56 (80%), Positives = 53/56 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+A RA+EEYDYLFKVVLIGDSGVGKSNLLSRF R+EF L+++STIGVEFAT+T+QV
Sbjct: 3 VAYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQV 58
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHV 55
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 50/53 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFAT++L +
Sbjct: 5 RGDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNI 57
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 48/50 (96%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFC ESKSTIGVEFATR ++V
Sbjct: 6 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEV 55
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+EEYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 5 EEEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKV 55
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 52/55 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RA+EEYDYLFKVVLIGDSGVGKSNLLSRF R+EF LE++STIGVEFAT+T++V +
Sbjct: 11 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDD 65
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/55 (81%), Positives = 52/55 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RA+EEYDYLFKVVLIGDSGVGKSNLLSRF R+EF LE++STIGVEFAT+T+QV +
Sbjct: 6 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDD 60
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++EEYD+LFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 3 SEEEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 54
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%), Gaps = 6/62 (9%)
Query: 1 MARRA------DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MARRA +EYDYLFK+VLIGDSGVGKSNLLSRFT+N F L+SKSTIGVEFATRT+
Sbjct: 1 MARRAAAWEQGGDEYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTI 60
Query: 55 QV 56
+V
Sbjct: 61 EV 62
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila
ATCC 42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila
ATCC 42464]
Length = 213
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++Q+
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQI 53
>gi|342905805|gb|AEL79186.1| putative rab11 [Rhodnius prolixus]
Length = 76
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVV 55
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 50/53 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+AD+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEF T++L +
Sbjct: 5 KADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNI 57
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/48 (93%), Positives = 47/48 (97%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 49
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 50/53 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+A ++YDYLFKVVL+GDSGVGKSNLLSRFTRN F L+SKSTIGVEFATRT+QV
Sbjct: 11 QAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQV 63
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+DE+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++++
Sbjct: 4 SDEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRI 55
>gi|102139998|gb|ABF70133.1| GTP-binding protein, putative [Musa balbisiana]
Length = 75
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 51/53 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 5 RAEDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSITV 57
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/55 (85%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
MA + DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++Q
Sbjct: 1 MAGKEDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ 54
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 50/51 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++++
Sbjct: 10 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEI 60
>gi|125527196|gb|EAY75310.1| hypothetical protein OsI_03201 [Oryza sativa Indica Group]
Length = 80
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 52/55 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RA+EEYDYLFKVVLIGDSGVGKSNLLSRF R+EF LE++STIGVEFAT+T++V +
Sbjct: 11 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDD 65
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M+ DEEYDYLFKVVL+GDSGVGKSNLLSRFTRN F LE+KSTIGVEFATR++ +
Sbjct: 1 MSNPRDEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMI 56
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 51/52 (98%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF L++KSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQV 53
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 50/53 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ D+EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT++L +
Sbjct: 5 KGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNI 57
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 51/54 (94%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++A ++YDYLFKVVL+GDSGVGKSNLLSRFTRN F L+SKSTIGVEFATRT+QV
Sbjct: 11 QQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQV 64
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 50/53 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R +++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRT +V
Sbjct: 5 RVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKV 57
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 53/55 (96%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
RA+++YDYLFK+VLIGDSGVGKSNLLSRF+RNEF LESKSTIGVEFATR+++V +
Sbjct: 6 RAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDD 60
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 50/52 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL V
Sbjct: 6 SEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV 57
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 48/56 (85%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 1 MGAREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 49/50 (98%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRN+F LESKSTIGVEFATR+++
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIK 53
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 50/54 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MA ++EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++
Sbjct: 1 MASPREDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSI 54
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 50/54 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MA ++EYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++
Sbjct: 1 MASPREDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSI 54
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
++YDYLFKVVLIGDSGVGK+NLL RFTRNEF LESKSTIGVEFATR++QV N
Sbjct: 3 DDYDYLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDN 54
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/48 (93%), Positives = 47/48 (97%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 17 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 64
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/48 (93%), Positives = 47/48 (97%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 80
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A +EYD+LFKVVLIGDSGVGKSNLLSRFTRNEF ++SKSTIGVEFATR++QV
Sbjct: 2 ASDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQV 53
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 50/55 (90%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
D+EYDYLFK+VLIGDSGVGKSNLLSRFT NEF LESKSTIGVEFAT+ L++ N +
Sbjct: 2 DDEYDYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHT 56
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 210
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD+LFKVVLIGDSG GKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LES STIGVEFATR+++V
Sbjct: 1 MGAREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEV 55
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 49/53 (92%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ D+EYDYLFK+V IGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT++L +
Sbjct: 5 KGDDEYDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDI 57
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFAT++LQ+
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQI 56
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFAT++LQ+
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQI 56
>gi|183979270|dbj|BAG30796.1| similar to CG5771-PA [Papilio xuthus]
Length = 72
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKS+LLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 1 MGTREDE-YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MA +++YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++
Sbjct: 1 MASPKEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSI 54
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 51/61 (83%), Gaps = 6/61 (9%)
Query: 2 ARRA------DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
ARRA +EYDYLFKVVLIGDSGVGKSNLLSRFT+N F L+SKSTIGVEFATRT Q
Sbjct: 3 ARRAAAWEQGGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQ 62
Query: 56 V 56
V
Sbjct: 63 V 63
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus
anophagefferens]
Length = 186
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/49 (87%), Positives = 47/49 (95%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
D EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFAT+++
Sbjct: 5 DNEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSI 53
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATRT+ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINV 54
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFAT++LQ+
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQM 56
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFAT++LQ+
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQM 56
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/52 (84%), Positives = 47/52 (90%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A+ YDYLFKVVLIGDSG GKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 221 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISV 272
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFAT++LQ+
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQM 56
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 47/52 (90%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A+ YDYLFKVVLIGDSG GKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 3 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISV 54
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 47/52 (90%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A+ YDYLFKVVLIGDSG GKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 3 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISV 54
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/56 (78%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M+ DEEYDYLFKVVL+GDSGVGKSNLLSRFTRN F LE+KSTIGVEFATR++ +
Sbjct: 1 MSNPRDEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMI 56
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFAT++LQ+
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQM 56
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 54
>gi|215767735|dbj|BAG99963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 102
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFAT++LQ+
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQM 56
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 48/50 (96%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
YDYLFK+VLIGDSGVGKSNLLSRFTR+EF LESKSTIGVEFAT+++Q+ N
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKN 57
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/56 (83%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKS+LLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 1 MGTREDE-YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 213
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/56 (83%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE YDYLFKVVLIGDSGVGKS+LLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 1 MGTREDE-YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 213
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 48/50 (96%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
YDYLFK+VLIGDSGVGKSNLLSRFTR+EF LESKSTIGVEFAT+++Q+ N
Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKN 53
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or
the budding of post-Golgi vesicles from the
trans-Golgi, putative; Ypt31p [Cryptococcus gattii
WM276]
Length = 213
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 48/50 (96%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
YDYLFK+VLIGDSGVGKSNLLSRFTR+EF LESKSTIGVEFAT+++Q+ N
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKN 57
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS
4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS
4417]
Length = 223
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+YDYLFK+VLIGDSGVGKSNLLSRFT N+F LESKSTIGVEFATRT++V N
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVEN 59
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 48/50 (96%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
YDYLFK+VLIGDSGVGKSNLLSRFTR+EF LESKSTIGVEFAT+++Q+ N
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKN 57
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 51/60 (85%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFSS 61
A+ EEYD+LFK+VLIGDSGVGKSNLLSRFT+NEF LESK+TIGVEFAT++ + N S
Sbjct: 3 AQHEQEEYDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENGQS 62
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/49 (89%), Positives = 46/49 (93%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
EYD LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 41 EYDLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 89
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MA +++YDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++
Sbjct: 165 MASPKEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSI 218
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 50/53 (94%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ +EYDYLFK+VLIGDSGVGKSNLLSRFTRN+F LESKSTIGVEFAT++L++
Sbjct: 5 KGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEI 57
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/47 (93%), Positives = 46/47 (97%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 47
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 48/50 (96%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
YDYLFK+VLIGDSGVGKSNLLSRFTR+EF LESKSTIGVEFAT+++Q+ N
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKN 57
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 47/48 (97%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
E+YDYL+K+VLIGDSGVGKSNLLSRFTRNEF LE+KSTIGVEFATRT+
Sbjct: 9 EDYDYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTI 56
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R D EY YLFK+VLIGD+GVGKSN+LSRFTRN F L+SKSTIGVEFAT++LQ+
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQM 56
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 49/50 (98%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF +ESKSTIGVEFATR++++
Sbjct: 6 DDYDYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEI 55
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 48/53 (90%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
RA+++YDYLFKV LIGDSGVGKSNL RFTRNEF LESKSTIGVEFATR+L V
Sbjct: 5 RAEDDYDYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNV 57
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS
421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS
421]
Length = 219
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT NEF +ESKSTIGVEFATRT++V
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEV 57
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+YDYLFK+VLIGDSGVGKSNLLSRFT NEF LESKSTIGVEFATRT++V +
Sbjct: 10 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVED 60
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS
4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS
4309]
Length = 219
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT NEF +ESKSTIGVEFATRT++V
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEV 57
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/51 (82%), Positives = 49/51 (96%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D++YDYLFKVVL GDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+++++
Sbjct: 10 DDKYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEI 60
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 51/55 (92%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+A+++YDYLFKVVL GDSGVGKSNLLSRFTRN+F +S+STIGVEFATR++QV +
Sbjct: 5 KAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDD 59
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF +ESKSTIGVEFATRT++V N
Sbjct: 6 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVEN 56
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae
RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF +ESKSTIGVEFATRT++V N
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVEN 59
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF +ESKSTIGVEFATRT++V N
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVEN 59
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT NEF +ESKSTIGVEFATRT++V
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEV 57
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF +ESKSTIGVEFATRT++V N
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVEN 59
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+DYLFKVVLIGDSGVGKSNLLSRFTRNEF LE+KSTIGVEFATRT+ V
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISV 54
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis
subvermispora B]
Length = 212
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+DYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV 54
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 222
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF +ESKSTIGVEFATRT++V N
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVEN 59
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 48/49 (97%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+Y+YLFK+VLIGDSGVGKSNLLSRFTRNEF LES+STIGVEFATRT+++
Sbjct: 10 DYEYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEI 58
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF +ESKSTIGVEFATRT++V N
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVEN 59
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF +ESKSTIGVEFATRT++V N
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVEN 59
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 47/52 (90%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A+ YDYLFKVVLIGDSG GKSNLLSRFTRNEF L+S+STIGVEFATR++ V
Sbjct: 3 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINV 54
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 50/52 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A+E+YDYLFKVVLIGDSGVGKSN+LSRFTR EF LES+STIGVEFAT+++++
Sbjct: 8 AEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRI 59
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 50/52 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A+E+YDYLFKVVLIGDSGVGKSN+LSRFTR EF LES+STIGVEFAT+++++
Sbjct: 8 AEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRI 59
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 53/59 (89%), Gaps = 3/59 (5%)
Query: 1 MARRADE---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA +D+ +Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 1 MADNSDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF +SKSTIGVEFATR+L+V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEV 54
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 3/59 (5%)
Query: 1 MARRADE---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M AD+ +Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 1 MTDNADDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
M R ++EYDYL KVVLIGDSGVGKSNLLSRF +NEF LESK+TIGVEF T+T++
Sbjct: 1 MTSRGEDEYDYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIE 55
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/59 (79%), Positives = 50/59 (84%), Gaps = 8/59 (13%)
Query: 6 DEEYDYLFK--------VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EYDYLFK VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYDYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 63
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 50/58 (86%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
M +EE+DYLFK+VL+GDSGVGKSNLL RFTRNEF L+SKSTIGVEFAT+T+ + +
Sbjct: 1 MTSEKEEEHDYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLED 58
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
DYLFKVVLIGD+GVGKSNLLSRFTRNEF LESKSTIGVEFATR++Q
Sbjct: 10 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQ 55
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 50/52 (96%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A+E+YDYLFKVVLIGDSGVGKSN+LSRFTR EF LES+STIGVEFAT+++++
Sbjct: 8 AEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRI 59
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 3/59 (5%)
Query: 1 MARRADE---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA D+ +Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 1 MADNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 3/59 (5%)
Query: 1 MARRADE---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA D+ +Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 1 MADNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 3/59 (5%)
Query: 1 MARRADE---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA D+ +Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 1 MADNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 3/59 (5%)
Query: 1 MARRADE---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA D+ +Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 1 MADNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YD+LFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++ V
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINV 54
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 50/54 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
A RA+++YDYLFKVVL GDSGVGKSNLLSRFTRN+F +S++TIGVEFATR++Q
Sbjct: 3 AYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQ 56
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 47/49 (95%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
DE YDYL+K+VLIGDSGVGKSNLLSRFTR+EF LESKSTIGVEFAT+++
Sbjct: 5 DEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSI 53
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
++EYDYLFK VLIGDSGVGKSNLL RFTRNEF +ESKSTIGVEFATR + + N
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDN 56
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 47/51 (92%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+EEYDYLFK+VLIGDSGVGKSNLLSRFTR+ F LESKSTIGVEFATR + +
Sbjct: 10 EEEYDYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNI 60
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 50/54 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
A RA+++YDYLFKVVL GDSGVGKSNLLSRFTRN+F +S++TIGVEFATR++Q
Sbjct: 3 AYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQ 56
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 52/59 (88%), Gaps = 3/59 (5%)
Query: 1 MARRADE---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA D+ +Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 1 MADNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+DYLFKVVLIGDSGVGKSNLLSRFTRNEF LE+KSTIGVEFATR++ V
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINV 54
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
++EYDYLFK VLIGDSGVGKSNLL RFTRNEF +ESKSTIGVEFATR + + N
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDN 56
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS
6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS
6284]
Length = 231
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/49 (87%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT NEF LESKSTIGVEFATRT++V
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEV 57
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 51/56 (91%), Gaps = 2/56 (3%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA +++ +D+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+L +
Sbjct: 1 MAEQSN--FDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAI 54
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 50/54 (92%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
A RA+++YDYLFKVVL GDSGVGKSNLLSRFTRN+F +S++TIGVEFATR++Q
Sbjct: 3 AYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQ 56
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 48/49 (97%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/58 (77%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA + D YDYLFK+VLIGDSGVGKSNLLSRFTR+EF LESKSTIGVEFAT+++Q+ N
Sbjct: 1 MAMKEDY-YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKN 57
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS
2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS
2517]
Length = 245
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT NEF +ESKSTIGVEFATRT+++
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEM 57
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/56 (76%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + YDYL+K+VLIGDSGVGKS+LLSRFTRNEF +ESKSTIGVEFATR++QV
Sbjct: 1 MASGRYDHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQV 56
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 47/49 (95%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
DYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++V +
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 49
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora
larici-populina 98AG31]
Length = 214
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YD+LFKVVLIGDSGVGKSNLLSRFTRNEF +ESKSTIGVEFATR++ V
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVV 54
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 48/49 (97%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 47/48 (97%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKS++LSRFTRNEF ++SKSTIGVEFATR+L+V
Sbjct: 8 YDYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEV 55
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 48/49 (97%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC
42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC
42720]
Length = 220
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 48/49 (97%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M+ R DE YDYLFKVVLIGDSGVGKSNLLSRFTR+ F LESKSTIGVEFATR + +
Sbjct: 6 MSGREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNI 60
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 47/49 (95%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
DE YDYL+K+VLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSV 53
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M+ R DE YDYLFKVVLIGDSGVGKSNLLSRFTR+ F LESKSTIGVEFATR + +
Sbjct: 6 MSGREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNI 60
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YD LFK+VLIGDSGVGKSNLLSRFT+NEF ++SKSTIGVEFATRTL++
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI 57
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YD LFK+VLIGDSGVGKSNLLSRFT+NEF ++SKSTIGVEFATRTL++
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI 57
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YD LFK+VLIGDSGVGKSNLLSRFT+NEF ++SKSTIGVEFATRTL++
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI 57
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 47/49 (95%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
DE YDYL+K+VLIGDSGVGKSNLLSRFTR+EF LESKSTIGVEFAT+++
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSI 53
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+DYLFKVVLIGDSGVGKSNLLSRFTRNEF +E+KSTIGVEFATR++ V
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINV 54
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YD+LFKVVLIGDSGVGKSNLLSRFTRNEF ++SKSTIGVEFATR++ V
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISV 54
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 42/49 (85%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT NEF +ESKSTIGVEFATRT++V
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEV 57
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YD LFK+VLIGDSGVGKSNLLSRFT+NEF ++SKSTIGVEFATRTL++
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI 57
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M+ R DE YDYLFKVVLIGDSGVGKSNLLSRFTR+ F LESKSTIGVEFATR + +
Sbjct: 17 MSGREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNI 71
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/48 (89%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++ V
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINV 54
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 49/52 (94%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
+R +E+YDYLFK+V+IGDSGVGK+N+LSRFT++EF +ESK TIGVEFAT+T+
Sbjct: 2 QRPEEDYDYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTV 53
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YD LFK+VLIGDSGVGKSNLLSRFT+NEF ++SKSTIGVEFATRTL++
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI 57
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 223
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YD LFK+VLIGDSGVGKSNLLSRFT+NEF ++SKSTIGVEFATRTL++
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI 57
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 48/50 (96%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E+YDYLFKVVLIGDSGVGKSN+LSRFTR EF LES+STIGVEFAT+++++
Sbjct: 13 EDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRI 62
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 46/48 (95%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YD+LFKVVLIGDSGVGKSNLLSRFTRNEF ++SKSTIGVEFATR++ V
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINV 54
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/58 (68%), Positives = 51/58 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA + ++EYD+LFK+VLIGDSGVGK+NLLSRFT+NEF ++SK TIGVEFAT+T+ N
Sbjct: 1 MASKNEDEYDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITEN 58
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 48/49 (97%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF L+S+STIGVEFATRTL++
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEI 59
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 47/49 (95%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
DE YDYL+K+VLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSV 53
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/49 (83%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT N+F +ESKSTIGVEFATRT++V
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEV 57
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+EYD+LFKVV+IGDSGVGK+N+L RFTR+EF L+SKSTIGVEFATRT+ + N
Sbjct: 3 DEYDFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDN 54
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 47/55 (85%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
M+R DE+YDYLFK+VLIGDSGVGK+N+L RF NEF LESK TIGVEFAT+T Q
Sbjct: 1 MSRTNDEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQ 55
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 47/55 (85%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
M R DEEYD+LFK+VLIGDSGVGK+N+L RF N+F LESK TIGVEFAT+TLQ
Sbjct: 1 MTRTNDEEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQ 55
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 48/52 (92%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++EYDYL KVVL GDSGVGK+NLLSRFTRNEF LES+STIGVEFATR++ +
Sbjct: 24 SEDEYDYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHI 75
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis
niloticus]
Length = 207
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 52/56 (92%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+DE Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TRT+Q+ NF+
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFT 58
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune
H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune
H4-8]
Length = 212
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 45/48 (93%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFK+VLIGDSGVGKSNLLSRFTRNEF ++KSTIGVEFATR++ V
Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITV 54
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 49/54 (90%), Gaps = 2/54 (3%)
Query: 5 ADEEYD--YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD Y+ VVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDVSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 55
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/75 (62%), Positives = 51/75 (68%), Gaps = 19/75 (25%)
Query: 1 MARRADEEYDYLFK-------------------VVLIGDSGVGKSNLLSRFTRNEFCLES 41
M D+EYDYLFK +VLIGDSGVGKSNLLSRFTRNEF LES
Sbjct: 1 MGGSRDDEYDYLFKELQGCWVAIPIIPSLQIIKMVLIGDSGVGKSNLLSRFTRNEFNLES 60
Query: 42 KSTIGVEFATRTLQV 56
KSTIGVEFATR++QV
Sbjct: 61 KSTIGVEFATRSIQV 75
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 50/59 (84%), Gaps = 7/59 (11%)
Query: 5 ADEEYD-------YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD +LFKVVLIGDSG GKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDVSPRPLTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 60
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 12/64 (18%)
Query: 5 ADEEYDYLFK------------VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR 52
A++EYD+LFK VVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR
Sbjct: 2 ANDEYDFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATR 61
Query: 53 TLQV 56
++Q+
Sbjct: 62 SIQI 65
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum
CS3096]
Length = 212
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 47/52 (90%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD VVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDREPTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 53
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/59 (72%), Positives = 53/59 (89%), Gaps = 3/59 (5%)
Query: 1 MARRADE---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA +D+ +Y+YL+K+VLIGDSGVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 1 MADNSDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/49 (85%), Positives = 46/49 (93%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF LESKSTIGVEFATRT+ V
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDV 57
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 46/49 (93%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF + SKSTIGVEFATRT++V
Sbjct: 10 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEV 58
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/49 (83%), Positives = 46/49 (93%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT NEF ++SKSTIGVEFATRT+ V
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDV 57
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/54 (75%), Positives = 48/54 (88%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ + E+ + FK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 132 KNSAEKDFHFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 185
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 46/49 (93%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF + SKSTIGVEFATRT++V
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEV 57
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%), Gaps = 10/62 (16%)
Query: 5 ADEEYDYLFK----------VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
A++EYD+LFK +VLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++
Sbjct: 2 ANDEYDFLFKGIYLPGPVLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSI 61
Query: 55 QV 56
QV
Sbjct: 62 QV 63
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+Y+YL+K+VLIGD GVGKSNLLSRFTR+EF LES+STIGVEFATRTL++
Sbjct: 11 DYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEI 59
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/49 (81%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YD+LFK+VLIGDSGVGKSNLLSRFT NEF L+SK+TIGVEFATRT++V
Sbjct: 9 DYDFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEV 57
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 46/51 (90%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
A ++Y YLFKVVLIGDSGVGKSNLLSRF RNEF +SKSTIGVEFATR+++
Sbjct: 2 ASDDYHYLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIE 52
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 14/66 (21%)
Query: 5 ADEEYDYLFK--------------VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFA 50
A++EYD+LFK +VLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFA
Sbjct: 2 ANDEYDFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFA 61
Query: 51 TRTLQV 56
TR++QV
Sbjct: 62 TRSIQV 67
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 52/56 (92%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+DE Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TRT+Q+ +F+
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFT 58
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda
melanoleuca]
Length = 213
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 50/54 (92%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
M RA+E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTV 54
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 51/56 (91%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M RA+E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 51/56 (91%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M RA+E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 51/56 (91%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M RA+E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 51/56 (91%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M RA+E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R DE+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 46/49 (93%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR 52
+A+++YDYLFKVVL GDSGVGKSNLLSRFTRN+F +S+STIGVEFATR
Sbjct: 5 KAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATR 53
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 45/53 (84%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R+ + DY+FKVVLIGDS VGKS LL+RF RNEF L+SK+TIGVEF TRTLQV
Sbjct: 10 RSPKRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQV 62
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 51/71 (71%), Gaps = 19/71 (26%)
Query: 5 ADEEYDYLFK-------------------VVLIGDSGVGKSNLLSRFTRNEFCLESKSTI 45
A++EYD+LFK VVLIGDSGVGKSNLLSRFTRNEF L+SKSTI
Sbjct: 2 ANDEYDFLFKGNVATFPAQSPQLFIPFRYVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTI 61
Query: 46 GVEFATRTLQV 56
GVEFATR++QV
Sbjct: 62 GVEFATRSIQV 72
>gi|429965625|gb|ELA47622.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 207
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNF 59
E YDYLFK+VLIGDSGVGK+NLLS+ TR EF E+K+TIGVEFATRT ++ N
Sbjct: 2 ESYDYLFKIVLIGDSGVGKTNLLSQLTRGEFSAETKATIGVEFATRTFKIDNL 54
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 17/69 (24%)
Query: 5 ADEEYDYLFK-----------------VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGV 47
A++EYD+LFK +VLIGDSGVGKSNLLSRFTRNEF L+SKSTIGV
Sbjct: 2 ANDEYDFLFKGTSYTPRPAMSNPILRALVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGV 61
Query: 48 EFATRTLQV 56
EFATR++QV
Sbjct: 62 EFATRSIQV 70
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/51 (82%), Positives = 45/51 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+EY VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 DDEYXXXXPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 51/56 (91%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R++E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRSEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 51/59 (86%), Gaps = 3/59 (5%)
Query: 1 MARRADE---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA AD+ +Y+YLFK+VLIGDS VGK+NLLSRFTR+EF +S++TIGVEFATRTL++
Sbjct: 1 MADTADDYSYDYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEI 59
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 47/52 (90%), Gaps = 3/52 (5%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD VVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDV---VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 50
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 44/46 (95%)
Query: 11 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++F VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 78 FVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 123
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 49/60 (81%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
M R + EYD+LFK++LIGDSGVGK+N+L RF +NEF L+SK TIGVEF+T+T+ V N S
Sbjct: 1 MTRCNENEYDFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKS 60
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis
niloticus]
Length = 210
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 51/56 (91%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+D+ Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TRT+++ N +
Sbjct: 3 SDDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLT 58
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/51 (76%), Positives = 46/51 (90%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
A E+YDYL+K+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATR++Q
Sbjct: 2 AQEDYDYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQ 52
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 50/56 (89%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+DE Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TRT+Q+ +
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLT 58
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVT 57
EE DY+FKVV+IGDSGVGK+ LL RFTR +FCL+SKSTIG+EF TRT+ +
Sbjct: 2 EEPDYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIA 52
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p
[Komagataella pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p
[Komagataella pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 47/49 (95%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+Y+YLFK+VL+G+S VGKSNLLSRFTR+EF +ESK+TIGVEFATRT++V
Sbjct: 11 DYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEV 59
>gi|47206662|emb|CAF91657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 109
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 52/56 (92%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+DE Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TRT++++ F+
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVELSGFT 58
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 46/56 (82%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA DEE DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R ++V
Sbjct: 1 MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRV 56
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/45 (88%), Positives = 43/45 (95%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
L +VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 53 LIEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 97
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
F VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 44
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA DEE DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R ++V +
Sbjct: 1 MADAFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGD 58
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 51/55 (92%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNF 59
+++ Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TRT+Q+ NF
Sbjct: 3 SEDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENF 57
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/43 (93%), Positives = 42/43 (97%)
Query: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 43
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 47/52 (90%), Gaps = 3/52 (5%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD + VLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDVM---VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 50
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 49/54 (90%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVT 57
+AD++YDYLFK+VL GDSGVGKSNLL RFT+N+F +SK+TIGVEFATR++ ++
Sbjct: 3 KADDDYDYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITIS 56
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 51/56 (91%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+DE Y++++KVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TRT+Q+ ++
Sbjct: 3 SDESYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYT 58
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 50/56 (89%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M R +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVML 56
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 50/55 (90%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNF 59
+DE Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TRT+Q+ +
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSL 57
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 48/55 (87%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
R D+++DY+FK+VLIGDSGVGKSNLLSRFT++EF + K+TIGVEFATR++ N
Sbjct: 3 RNDQDHDYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADN 57
>gi|226443055|ref|NP_001140022.1| Ras-related protein RABA2a [Salmo salar]
gi|221221270|gb|ACM09296.1| Ras-related protein RABA2a [Salmo salar]
Length = 79
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 49/52 (94%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+DE Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TRT+Q+
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQL 54
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 46/53 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+++ DY+FK+VLIGDS VGKS LL+RF RNEFC++SK+TIGVEF T+TL + N
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDN 60
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 49/52 (94%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A+E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ V
Sbjct: 4 AEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMV 55
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D + DY+FKVVLIGDS VGKS LLSRF+RNEF LESK+TIGVEF TRT+ V
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVV 59
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial
[Saccoglossus kowalevskii]
Length = 145
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 43/46 (93%)
Query: 11 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ F VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 FFFVVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 46
>gi|148701356|gb|EDL33303.1| mCG14915, isoform CRA_a [Mus musculus]
Length = 126
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 40/41 (97%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIG 46
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIG
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIG 45
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D + DY+FKVVLIGDS VGKS LLSRF+RNEF LESK+TIGVEF TRT+ V
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVV 59
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 49/54 (90%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
M A+E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+
Sbjct: 1 MGNGAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTV 54
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/47 (87%), Positives = 43/47 (91%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
L VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV N
Sbjct: 17 LHPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDN 63
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 43/50 (86%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ DY+FKVVLIGDS VGKS LL+RF RNEF L+SK+TIGVEF TRTLQV
Sbjct: 12 QRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQV 61
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 45/54 (83%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
AD+ YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+T+ + N
Sbjct: 3 ADQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNN 56
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 47/58 (81%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA DEE DYLFK VLIGDSGVGKSN+LSRF ++EF L+SK TIGVEFA R ++V +
Sbjct: 1 MADAFDEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGD 58
>gi|148678260|gb|EDL10207.1| mCG22989, isoform CRA_c [Mus musculus]
Length = 96
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 40/41 (97%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIG 46
D+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIG
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIG 45
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/54 (75%), Positives = 45/54 (83%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R +D + VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 45 RHSDSCKSWHGAVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 98
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M DE+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGKDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 44/54 (81%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
AD YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+ +Q+ N
Sbjct: 3 ADHNYDYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRN 56
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 51/56 (91%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+DE Y+++FKVVLIG+SGVGKSNLLSR+T+NEF +S++TIGVEF+TRT+++ F+
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFT 58
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 44/47 (93%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFAT 51
+D+ YDYL+K+VLIGDS VGKSNLL+R+T+NEF LESKSTIGVEFAT
Sbjct: 3 SDDSYDYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFAT 49
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
DEE DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R ++V +
Sbjct: 8 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRD 60
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV N
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDN 73
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 47/52 (90%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
E YD++FK+VL+GDSGVGKSNL+ RFT+NEF +SKSTIGVEFAT+T+Q+ +
Sbjct: 4 ESYDFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIED 55
>gi|449664133|ref|XP_002154127.2| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Hydra
magnipapillata]
Length = 65
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 45/52 (86%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+E YD+L+KVVL GDSGVGKS LLSRFTR+EF ESKSTIGVEFATRT+ +
Sbjct: 4 GNEPYDFLYKVVLTGDSGVGKSCLLSRFTRDEFDAESKSTIGVEFATRTINI 55
>gi|345311553|ref|XP_001505470.2| PREDICTED: ras-related protein Rab-11B-like [Ornithorhynchus
anatinus]
Length = 165
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/44 (88%), Positives = 41/44 (93%)
Query: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 9 LSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 52
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/42 (92%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 56 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 97
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/42 (92%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 174 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 215
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 46/58 (79%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
M DEE DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MGDSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVAD 58
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 213
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 45/50 (90%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+DYLFK V++GDSGVGK+N+LSRFTRNEF ++SKSTIGV+FAT+ + V N
Sbjct: 7 HDYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDN 56
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 49/52 (94%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A+E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ V
Sbjct: 4 AEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILV 55
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/43 (90%), Positives = 41/43 (95%)
Query: 16 VLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV N
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDN 43
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA D+ DYLFKVVLIGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++++
Sbjct: 1 MAYNDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEI 56
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA D+ DYLFKVVLIGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++++
Sbjct: 1 MAYNDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEI 56
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ R E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 14 LVPRGSEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 69
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D + DY+FKVVLIGDS VGKS LL+RF+RNEF LESK+TIGVEF TRT+ V
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVV 59
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 49/54 (90%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVT 57
+A+++YDYLFKVVL GDSGVGKSNLL RFT+N+F +SK+TIGVEFATR++ ++
Sbjct: 3 KAEDDYDYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISIS 56
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 44/53 (83%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
D+ DY+FKVV+IGDS VGKS +LSRF +NEF L+SKSTIGVEF TRT+ + N
Sbjct: 9 DQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDN 61
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MA ++EYD+L+K+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATR++
Sbjct: 1 MANTGEDEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSI 54
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 51/56 (91%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+D+ Y++++KVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TRT+Q+ ++
Sbjct: 3 SDDSYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYT 58
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/42 (92%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 42
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 46/51 (90%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FKVVLIGDS VGKS LL+RF+RNEF +ESK+TIGVEF TRTL++
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEI 59
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c;
AltName: Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 46/51 (90%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FKVVLIGDS VGKS LL+RF+RNEF +ESK+TIGVEF TRTL++
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEI 59
>gi|440494412|gb|ELQ76793.1| GTPase Rab11/YPT3, small G protein superfamily
[Trachipleistophora hominis]
Length = 207
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E YDYLFK+VLIGDSGVGK+NLLS+ TR EF E+K+TIGVEFAT+T ++
Sbjct: 2 ENYDYLFKIVLIGDSGVGKTNLLSQLTRKEFSAETKATIGVEFATKTFKI 51
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 48/51 (94%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+EE++++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRTL V
Sbjct: 5 EEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTV 55
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/50 (74%), Positives = 46/50 (92%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
+E+YD+L+K+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATR++Q
Sbjct: 2 EEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQ 51
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 43/51 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D + DY+FKVVLIGDS VGKS LLSRF R+EF LESKSTIGVEF TRT+ V
Sbjct: 5 DVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISV 55
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 43/51 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D + DY+FKVVLIGDS VGKS LLSRF R+EF LESKSTIGVEF TRT+ V
Sbjct: 5 DVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISV 55
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium
distachyon]
Length = 233
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 42/45 (93%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
DY+FKVV+IGDSGVGK+ LL RFTR+EFCL+SKSTIG+EF TRT+
Sbjct: 12 DYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTV 56
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/42 (92%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 42
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/42 (92%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 42
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E+ DY+FKVV+IGDS VGK+ LLSRFT+NEFC +SKSTIGVEF TRT+ +
Sbjct: 15 EKIDYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTI 64
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 43/49 (87%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
EY YLFK+VLIG+ GVGKSNLLSRFTRNEF L+SK TIGVEFAT+ + V
Sbjct: 4 EYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISV 52
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 44/54 (81%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
AD+ YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+ + + N
Sbjct: 3 ADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNN 56
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 48/54 (88%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTV 54
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus
rotundus]
Length = 212
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A + E+ DY+FKVV+IGDS VGK+ +LSRFT+NEFC +SKSTIGVEF T+T+ +
Sbjct: 10 AEKLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTI 64
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 5 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 60
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 48/54 (88%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+
Sbjct: 1 MGNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTV 54
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 47/59 (79%), Gaps = 7/59 (11%)
Query: 5 ADEEYDYLFK-------VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD VVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDREIADSVGTCIVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 60
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis
domestica]
Length = 218
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/45 (86%), Positives = 42/45 (93%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ K VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 11 ICKFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 45/51 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FKVVLIGDS VGKS LL+RF+RNEF LESK+TIGVEF TRT+ V
Sbjct: 8 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVV 58
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
E+YD+L+K+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATR++Q
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQ 52
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 47/55 (85%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
+ + E+YD+L+K+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATR++Q
Sbjct: 22 IKKMTQEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQ 76
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis
domestica]
Length = 213
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 48/54 (88%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTV 54
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 45/51 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FKVVLIGDS VGKS LL+RF+RNEF LESK+TIGVEF TRT+ V
Sbjct: 8 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVV 58
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA DE+ DYLFK VL GDSGVGKSNLLSRF++NEF +S+ TIGVEFA R ++V +
Sbjct: 1 MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVAD 58
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/44 (88%), Positives = 43/44 (97%)
Query: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
F++VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 48
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/50 (72%), Positives = 45/50 (90%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E YDYLFK+VLIGD+GVGKSNLL R+T+N+F + S+STIGVEFATR L++
Sbjct: 10 ENYDYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKM 59
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 50/57 (87%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+++E Y+++FKVVLIG+SGVGKSNLLSRF +NEF +S++TIGVEF+TRT+Q+ +
Sbjct: 6 KSNEAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNGLT 62
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Query: 1 MARRADEE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
MA DEE YDYLFKVV+IGDSGVGKSNLL R+T+ +F +ESK+TIGVEFAT++++ +
Sbjct: 1 MATTRDEEVYDYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQD 59
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E+ DY+FKVV+IGDS VGK+ +LSRFT+NEFC +SKSTIGVEF TRT+ +
Sbjct: 20 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTI 69
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E+ DY+FKVV+IGDS VGK+ +LSRFT+NEFC +SKSTIGVEF TRT+ +
Sbjct: 24 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTI 73
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
E+YD+L+K+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATR++Q
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQ 52
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FKVVLIGDS VGKS LLSRF RNEF L+SK+TIGVEF T+TL +
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNI 59
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 44/54 (81%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
AD+ YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+ + + N
Sbjct: 3 ADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNN 56
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 42/45 (93%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ VVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 3 VLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 47
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
DE+ DYLFK VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R ++V +
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRD 60
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FKVVLIGDS VGKS LLSRF RNEF L+SK+TIGVEF T+TL +
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNI 59
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
DE+ DYLFK VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R ++V +
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRD 60
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FKVVLIGDS VGKS LL+RF RNEF L+SK+TIGVEF TRTL +
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAI 59
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A R ++ DY+FKVV+IGDS VGK+ +LSRF +NEFC +SKSTIGVEF TRT+ +
Sbjct: 30 AERPLQKIDYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTI 84
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
D+E DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R ++V +
Sbjct: 7 DDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGD 59
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
E+ DY+FKVV+IGDS VGK+ LLSRFT+NEFC +SKSTIGVEF TRT+
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTV 70
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGNEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|413956769|gb|AFW89418.1| hypothetical protein ZEAMMB73_198274 [Zea mays]
Length = 97
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 4 AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRS 59
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 48/51 (94%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+EE++++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRTL +
Sbjct: 5 EEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTI 55
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+EE DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R ++V +
Sbjct: 9 EEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRD 61
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 47/55 (85%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+ DEE+D++FK+VLIGDS VGKSNLLSRFT+++F + K+TIGVEFATR++ N
Sbjct: 5 KKDEEHDFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDN 59
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 45/52 (86%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
E+ DY+FKVV+IGDS VGK+ +LSRFT+NEFC +SKSTIGVEF TRT+ + +
Sbjct: 3 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKD 54
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
DEE DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R ++V +
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGD 59
>gi|224143861|ref|XP_002336088.1| predicted protein [Populus trichocarpa]
gi|222871835|gb|EEF08966.1| predicted protein [Populus trichocarpa]
Length = 78
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 10 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKS 65
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 42/43 (97%)
Query: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++VLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 31 EIVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 73
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Query: 5 ADEEYDY---LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++EYD VLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 2 ANDEYDVSPACHTFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 56
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
E+ DY+FKVV+IGDS VGK+ LLSRFT NEFC +SKSTIGVEF TRT+
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTI 70
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/42 (92%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 42
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/41 (92%), Positives = 40/41 (97%)
Query: 16 VLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 41
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Monodelphis domestica]
Length = 205
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/42 (92%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 3 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 44
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/52 (71%), Positives = 45/52 (86%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++ DY+FKVVLIGDS VGKS +L+RF+RNEF L+SKSTIGVEF TRTL +
Sbjct: 10 ANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVI 61
>gi|8671779|gb|AAF78385.1|AC069551_18 T10O22.18 [Arabidopsis thaliana]
Length = 356
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEE DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R ++V
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRV 57
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/52 (71%), Positives = 45/52 (86%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++ DY+FKVVLIGDS VGKS +L+RF+RNEF L+SKSTIGVEF TRTL +
Sbjct: 10 ANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVI 61
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 47/50 (94%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 5 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 54
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 45/50 (90%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+ + + VVLIGDSGVGKSNLLSRFTR+EF LESKSTIGVEFAT+++Q+ N
Sbjct: 1 FSFFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKN 50
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEE DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R ++V
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRV 57
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN-FSSFTSL 65
E+ DY+FKVVLIGDS VGKS +L+RF RNEF ++SK+TIGVEF TRTL + + + + TS
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKYRAVTSA 64
Query: 66 HF 67
++
Sbjct: 65 YY 66
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/42 (92%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 48
>gi|70931407|ref|XP_737392.1| GTPase [Plasmodium chabaudi chabaudi]
gi|56512743|emb|CAH75166.1| GTPase, putative [Plasmodium chabaudi chabaudi]
Length = 57
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 45/50 (90%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+ + + VVLIGDSGVGKSNLLSRFTR+EF LESKSTIGVEFAT+++Q+ N
Sbjct: 1 FSFFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKN 50
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 52
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEE DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R ++V
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRV 57
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKS 63
>gi|125563045|gb|EAZ08425.1| hypothetical protein OsI_30691 [Oryza sativa Indica Group]
gi|125563047|gb|EAZ08427.1| hypothetical protein OsI_30693 [Oryza sativa Indica Group]
Length = 85
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 43/50 (86%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++ DY+FKVVLIGDS VGKS LL+RF RNEF L+SK+TIGVEF TRTL +
Sbjct: 13 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHI 62
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 43/50 (86%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++ DY+FKVVLIGDS VGKS LL+RF RNEF L+SK+TIGVEF TRTL +
Sbjct: 13 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHI 62
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 49/56 (87%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M +++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGKEDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 56
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEE DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R ++V
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRV 57
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 47/53 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+E+ DYLFK+V+IGDS VGKSNLL+RFTRNEF ++K+TIGV+F T+++++ N
Sbjct: 4 EEDNDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEN 56
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 49/55 (89%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
D Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TR++QV + +
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSIT 58
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/52 (71%), Positives = 44/52 (84%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SKSTIGVEF TRTL +
Sbjct: 6 ANQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVI 57
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 47/52 (90%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+ YD+LFK+VLIGDSGVGKSNLL R+T+N+F + S+STIGVEFATR++QV +
Sbjct: 9 DHYDHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVED 60
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 10 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKS 65
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 49/55 (89%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
D Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TR++QV + +
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSIT 58
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 44/49 (89%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E D+L K+VLIGDSGVGK+NLLSRF R++F +SKSTIGVEFAT+TL++
Sbjct: 5 EPDFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEI 53
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 49/55 (89%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
D Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TR++QV + +
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSIT 58
>gi|47179095|emb|CAG13867.1| unnamed protein product [Tetraodon nigroviridis]
Length = 66
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKV 42
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 47/56 (83%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 10 ANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 43/53 (81%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
D+ YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+ + + N
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRN 56
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ E+ DY+FKVV+IGDS VGK+ +LSRFT+NEFC +SKSTIGVEF T+T+ +
Sbjct: 1 KLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTI 53
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 43/49 (87%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
+ E DY+FKVV++GDS VGK+ LL+RFTR+EF L+SKSTIGVEF TRTL
Sbjct: 27 EAEIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTL 75
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SKSTIGVEF TRTL +
Sbjct: 12 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVI 62
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/52 (71%), Positives = 44/52 (84%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A+ + DY+FKVVLIGDS VGKS +L+RF RNEF L+SKSTIGVEF TRTL +
Sbjct: 10 ANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVI 61
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 48/51 (94%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+E+++++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRTL +
Sbjct: 5 EEDFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTI 55
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 44/48 (91%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
EEYD+L+K+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATR++
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSI 52
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 44/48 (91%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
EEYD+L+K+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATR++
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSI 52
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 45/51 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++ YDYLFK+VLIGDSGVGKSNLLSR+T+NEF L SK+TIGVE A R +++
Sbjct: 12 EDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEI 62
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 44/48 (91%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
EEYD+L+K+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATR++
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSI 52
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 63
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E+ DY+FKVV+IGDS VGK+ +LSRF +NEFC +SKSTIGVEF TRT+ +
Sbjct: 27 EKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTI 76
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/48 (81%), Positives = 42/48 (87%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
Y + VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 12 YTRMNPFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 59
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 47/56 (83%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 10 ANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
DE+ DYLFK VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R ++V +
Sbjct: 7 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRD 59
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 47/56 (83%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A+++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 10 ANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ DY+FKVVLIGDS VGKS LL+RF RNEF L+SK+TIGVEF TRTL +
Sbjct: 12 QRIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNI 61
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 46/51 (90%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+EE DYLFK+V+IGDS VGKSNLL+RFTRNEF ++K+TIGV+F T+++++
Sbjct: 3 EEENDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEI 53
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVT 57
E+ DY+FKVV+IGDS VGK+ +LSRF +NEFC +SKSTIGVEF TRT+ +
Sbjct: 27 EKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTIN 77
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 43/48 (89%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
++ DY+FK+VLIGDSGVGKS +LSR+ RNEF L+SK+TIGVEF TRTL
Sbjct: 11 QKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTL 58
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E DYL K+VLIGDSGVGK+NLL+RFTR++F ESKSTIGVEFA++T+Q+
Sbjct: 5 EPDYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQI 53
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 10 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKS 65
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
E+ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKS 58
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DYLFK+VLIGDS VGKSNLL+R+ RNEF SKSTIGVEF T+T+Q+
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQI 58
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E DY+FKVV+IGDS VGK+ +LSRFT++EFC +SKSTIGVEF TRT+ +
Sbjct: 14 ERIDYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTI 63
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 44/54 (81%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
A++ YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+ + + N
Sbjct: 2 AEQTYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKN 55
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
++ DY+FK+VLIGDSGVGKS +LSR+ RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 12 QKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKS 65
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 40/41 (97%)
Query: 16 VLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 5 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 45
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 40/42 (95%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++ V
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINV 42
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/42 (90%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 15 LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 56
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+++ DY+FKVVLIGDS VGK+ LL+RF RNEF L+SK+TIGVEF T+TL + N
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDN 61
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 4 AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRS 59
>gi|388497804|gb|AFK36968.1| unknown [Lotus japonicus]
Length = 90
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 44/50 (88%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
+DE DY+FKVV++GDSGVGKS LL+RF RNEF ++SK+TIGVEF T+T+
Sbjct: 8 SDEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTV 57
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+++ DY+FK+VLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL + N
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHN 60
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FK+VLIGDS VGKS LL+RF RNEF L+SK+TIGVEF T+TL +
Sbjct: 10 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVI 60
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 40/42 (95%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++ V
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISV 42
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/40 (92%), Positives = 39/40 (97%)
Query: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
LIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 43
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 4 AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRS 59
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
++ DY+FKVVLIGDS VGK+ LL+RF RNEF L+SK+TIGVEF T+TL + N
Sbjct: 10 QKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDN 61
>gi|66807211|ref|XP_637328.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122086021|sp|Q54KM9.1|RB11B_DICDI RecName: Full=Ras-related protein Rab-11B
gi|2708641|gb|AAB92559.1| GTPase rab11b [Dictyostelium discoideum]
gi|60465730|gb|EAL63807.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 220
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
EYDYL K+V+IGDSGVGKSNLLSR+ +NEF + STIGVEF+T+TL++ N
Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDN 57
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ DY+FKVVLIGDS VGKS LL+RF RN+F L+SK+TIGVEF TRTL +
Sbjct: 12 QRIDYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNI 61
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SKSTIGVEF TRTL +
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVI 64
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 4 AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRS 59
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SKSTIGVEF TRTL +
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVI 64
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
E+ DY+FKVVLIGDS VGKS +L+RF RNEF ++SK+TIGVEF TRTL + + S
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKS 58
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 43/50 (86%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++ DY+FKVV+IGDS VGK+ +LSRF +NEFC +SKSTIGVEF TRT+ +
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTI 68
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 41/42 (97%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+VLIGDSGVGKSNLLSRFTRNEF L++KSTIGVEFATR++QV
Sbjct: 22 MVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQV 63
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A ++ DY+FKVVLIGDS VGK+ +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 63
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+R+D++YD L KVVLIGDSGVGK+N LSRF R EF SK TIGVEFAT+ L +
Sbjct: 5 QRSDDDYDMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTI 58
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
A+++ DY+FKVVLIGDS VGKS +L+RF RN+F ++SK+TIGVEF TRTL + + S
Sbjct: 9 ANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKS 64
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+ ++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 10 SSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+++ DY+FKVVLIGDS VGK+ LL+RF RNEF ++SK+TIGVEF T+TL + N
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDN 61
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M+ + ++ DYLFKVVLIGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++++
Sbjct: 1 MSYQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEI 56
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+++ DY+FKVVLIGDS VGK+ LL+RF RNEF ++SK+TIGVEF T+TL + N
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDN 61
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M+ + ++ DYLFKVVLIGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++++
Sbjct: 1 MSYQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEI 56
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKS 59
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DY+FK+VLIGDS VGKS LL+RF RNEF L+SK+TIGVEF TRTL +
Sbjct: 13 DYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVI 59
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKS 59
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 65
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FK+VLIGDS VGKS LL+RF RNEF L+SK+TIGVEF T+T+ V
Sbjct: 9 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVV 59
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
A++ DY+FKVVLIGDS VGKS +L+RF+ NEF L+SKSTIGVEF TRTL +
Sbjct: 10 ANQRIDYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVI 61
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DY+FKVVLIGDS VGKS LL+RF R+EF ++SK+TIGVEF TRTL +
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSI 61
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 44/51 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FKVVLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+TL +
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAI 59
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 42/48 (87%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFK+VL+GDSGVGKSNLL RF +NEF ++TIGVEF+T+++Q+
Sbjct: 10 YDYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQI 57
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b;
AltName: Full=Ras-related protein GB3; Short=AtGB3;
AltName: Full=Ras-related protein Rab11G;
Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DY+FKVVLIGDS VGKS LL+RF R+EF ++SK+TIGVEF TRTL +
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSI 61
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
++ DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL + + S
Sbjct: 5 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKS 58
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DY+FKVVLIGDS VGKS LL+RF R+EF ++SK+TIGVEF TRTL +
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSI 61
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 47/53 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+EE +YLFK+V+IGDS VGKSNLL+RFTRNEF ++K+TIGV+F T+++++ N
Sbjct: 3 EEESEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDN 55
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 47/53 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+EE +YLFK+V+IGDS VGKSNLL+RFTRNEF ++K+TIGV+F T+++++ N
Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDN 56
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/40 (92%), Positives = 39/40 (97%)
Query: 16 VLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++Q
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQ 40
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
D DYLFKVVLIGDS VGKSNLLSR+ RNEF + SK+TIGVEF T++++
Sbjct: 4 DPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSME 53
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++ DY+FKVVLIGDS VGKS LL+RF RNEF L+SK+TIGVEF T+TL +
Sbjct: 11 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVI 60
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DY+FKVVLIGDS VGKS LL+RF R+EF ++SK+TIGVEF TRTL +
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSI 61
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
D DYLFKVVLIGDS VGKSNLLSR+ RNEF + SK+TIGVEF T++++
Sbjct: 4 DPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSME 53
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 1 MARRADEEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA DEE DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ L +
Sbjct: 1 MAYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVI 58
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ ++ DY+FKVV+IGDS VGK+ +LSRF +NEFC +SK+TIGVEF TRT+ +
Sbjct: 18 KNVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTI 71
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 44/50 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
D+ YDYLFK+V++GDSGVGKSNLL R+T+NEF + S T+G+EFAT+T+Q
Sbjct: 2 DDNYDYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQ 51
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ ++ DY+FKVV+IGDS VGK+ +LSRF +NEFC +SK+TIGVEF TRT+ +
Sbjct: 18 KNVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTI 71
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Query: 1 MARRADEEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MA DEE DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ L
Sbjct: 1 MAYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKL 56
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 44/50 (88%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
+DE DY+FKVV++GDSGVGKS LL+RF RNEF ++SK+TIGVEF T+T+
Sbjct: 8 SDEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTV 57
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
E DY+FKVV+IGDSGVGKS LL+RF RNEF L+SK+TIGVEF T+T+
Sbjct: 11 EGIDYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTV 58
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++ DY+FKVVLIGDS VGKS LL+ F RNEF L+SK+TIGVEF TRTL +
Sbjct: 13 QKIDYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHI 62
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 39/40 (97%)
Query: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+IGDSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 40
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+ YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+ + + N
Sbjct: 4 EHNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKN 56
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 44/50 (88%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
EE DY+FKVV+IGDS VGK+ LL RFT++EF ++SKSTIG+EF TRT+++
Sbjct: 2 EEEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEI 51
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
+ + DY+FKVVLIGDS VGKS +LSRF R+EF L+SK+TIGVEF TRT+ + + S
Sbjct: 4 NPKIDYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKS 58
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M D +YLFK+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+T+++
Sbjct: 1 MDENGDGAEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEI 56
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 42/51 (82%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+EE DYLFK VLIGDS VGKSNLLSRF+++EF +SK TIGVEFA R + V
Sbjct: 7 EEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHV 57
>gi|118489694|gb|ABK96648.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 117
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 5 ADEE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+DEE +YLFK+V+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++++
Sbjct: 3 SDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEI 56
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 41/51 (80%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+ DYLFK+VLIGDS VGKSNLL+RF RNEF SKSTIGVEF T+ + +
Sbjct: 8 DKADDYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDI 58
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931
[Arabidopsis thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 42/51 (82%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+EE DYLFK VLIGDS VGKSNLLSRF+++EF +SK TIGVEFA R + V
Sbjct: 7 EEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHV 57
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Query: 1 MARRADEEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MA DEE DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ L
Sbjct: 1 MAYGGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKL 56
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 46/53 (86%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+++ DY+FKVVLIGDS VGK+ LL+RF+RN+F ++SK+TIGVEF T+TL + N
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDN 61
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 45/51 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FKVVLIGDS VGK+ LL+RF+RNEF ++SK+TIGVEF T+TL +
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVI 59
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Query: 6 DEE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEE +YLFKVV+IGDS VGKSNLLSR+ RNEF + SK+TIGVEF T+++++
Sbjct: 3 DEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEI 54
>gi|242097064|ref|XP_002439022.1| hypothetical protein SORBIDRAFT_10g030070 [Sorghum bicolor]
gi|241917245|gb|EER90389.1| hypothetical protein SORBIDRAFT_10g030070 [Sorghum bicolor]
Length = 209
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 42/49 (85%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E DY+FK+V+IGDS VGK+ LL RFTR+EF L+SKSTIG+EF TRT+ +
Sbjct: 2 EEDYVFKIVVIGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDI 50
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 1 MARRADEE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
M R +E+ YD+LFK+VLIGDSGVGKS L+SRFT+++F +E + TIGVEF+T+T+++++
Sbjct: 1 MQRNQEEDVYDFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISD 59
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVT 57
++ DY+FKVV+IGDS VGK+ +LSRF +NEFC SKSTIGVEF TR++ +
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTIN 69
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVT 57
++ DY+FKVV+IGDS VGK+ +LSRF +NEFC SKSTIGVEF TR++ +
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTIN 69
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 40/42 (95%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIGDSGVGKSNLLSRFT N+F +ESKSTIGVEFATRT++V
Sbjct: 28 VVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEV 69
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +YLFKVV+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++ +
Sbjct: 8 EAEEYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDI 57
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
ADE DY+FK+V+ GDSGVGKS LL+RF +NEF ++SK TIGVEF TRT+
Sbjct: 8 ADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTV 57
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Query: 1 MARRAD--EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MA D + DYLFK+VLIGDS VGKSNLL+RF RNEF SKSTIGVEF T+ L
Sbjct: 1 MANDGDDGQSQDYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKL 56
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 42/47 (89%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLL+R+ RNEF L SK+TIGVEF T+TL++
Sbjct: 2 EYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEI 48
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 5 ADEE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+DEE +YLFK+V+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++++
Sbjct: 3 SDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEI 56
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Query: 5 ADEE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+DEE +YLFK+V+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++++
Sbjct: 3 SDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEI 56
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Query: 1 MARRADEEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
MA DE+ DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ L
Sbjct: 1 MAYGGDEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKL 56
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 46/73 (63%), Gaps = 25/73 (34%)
Query: 9 YDYLFKVVLIGDSGVGKS-------------------------NLLSRFTRNEFCLESKS 43
+DYLFKVVLIGDSGVGKS NLLSRFTRNEF LE+KS
Sbjct: 7 FDYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETKS 66
Query: 44 TIGVEFATRTLQV 56
TIGVEFATR++ V
Sbjct: 67 TIGVEFATRSITV 79
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E DY+FKVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TRTL +
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSL 66
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 44/49 (89%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
++YDYL+KVV+IGDSGVGKSNLL RFTR+EF E KSTIGVEF+++ ++
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIR 52
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Query: 1 MARRADEEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA ++EE DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ L +
Sbjct: 1 MAFVSEEEKTEDYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDI 58
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Query: 6 DEE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DEE +YLFKVV+IGDS VGKSNLLSR+ RNEF + SK+TIGVEF T+++++
Sbjct: 90 DEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEI 141
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
+ E DY+FKVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TRTL
Sbjct: 24 EAEIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTL 72
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 11 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YLFKVV+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T++L++
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEI 59
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 43/48 (89%)
Query: 11 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
Y FK+VL+GDSGVGKSNL+ RFT+NEF +SKSTIGVEFAT+T+Q+ +
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIED 48
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M + DYLFK+VLIGDS VGKSNLLSR++RNEF L S++TIGVEF T+++ +
Sbjct: 1 MGHGGSDGDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVI 56
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+++ DY+FKVVLIGDS VGK+ LL+RF +N+F ++SK+TIGVEF T+TL + N
Sbjct: 10 NQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDN 62
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 42/47 (89%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF + SK+TIGVEF T++L++
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEI 57
>gi|19074145|ref|NP_584751.1| RAS-RELATED GTP-BINDING PROTEIN RAB11 [Encephalitozoon cuniculi
GB-M1]
gi|449329015|gb|AGE95290.1| ras-related GTP-binding protein rab11 [Encephalitozoon cuniculi]
Length = 238
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +DYLFK+VLIGDS VGK+NLLS+ TRNEF +SK+TIGVEF T T ++
Sbjct: 33 ENFDYLFKIVLIGDSAVGKTNLLSKLTRNEFHKDSKATIGVEFGTITFKI 82
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M + DYLFK+VLIGDS VGKSNLLSR++RNEF L S++TIGVEF T+++ +
Sbjct: 1 MGHGGSDGDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVI 56
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+ DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI 58
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ DY+FKVVLIGDS GKS LL+RF RN+F L+SK+TIGVEF TRTL +
Sbjct: 12 QRIDYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNI 61
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E DY+FKVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TRTL +
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSL 66
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 42/49 (85%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E DY+FK+V++GDS VGK+ LL RFTR+EF L+SKSTIG+EF TRT+ +
Sbjct: 2 EEDYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDI 50
>gi|401825992|ref|XP_003887090.1| Rab11-like GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998248|gb|AFM98109.1| Rab11-like GTPase [Encephalitozoon hellem ATCC 50504]
Length = 235
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +DYLFK+VLIGDS VGK+NLLS+ TRNEF +SK+TIGVEF T T ++
Sbjct: 30 ENFDYLFKIVLIGDSAVGKTNLLSKLTRNEFHKDSKATIGVEFGTITFKI 79
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +YLFKVV+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+T+++
Sbjct: 8 EAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEI 57
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +YLFKVV+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++ +
Sbjct: 10 EAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDI 59
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 45/53 (84%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+++ DY+FKVVLIGDS VGK+ LL+RF +N+F ++SK+TIGVEF T+TL + N
Sbjct: 95 NQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDN 147
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+ DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI 58
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+VLIGDSGVGKSNLL R+T+NEF LESKSTIGVEFATR++Q N
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDN 44
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+ DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI 58
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 44/49 (89%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
++YDYL+KVV+IGDSGVGKSNLL RFTR+EF E KSTIGVEF+++ ++
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIR 52
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+++ DY+FK+VLIGDS VGKS L+RF RNEF +SK+TIGVEF T+TL + N
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDN 60
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
M RR +E+YDYLFKV+ GDS VGKSN++SR TRN F + K T+GVEF T+Q
Sbjct: 1 MGRRCNEDYDYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQ 55
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica
Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +YLFKVV+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++ +
Sbjct: 8 ETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDI 57
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 45/51 (88%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+++ DY+FKVVLIGDS VGK+ LL+RF+RN+F ++SK+TIGVEF T+TL +
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVI 59
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 42/47 (89%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++++
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEI 56
>gi|392512605|emb|CAD25255.2| RAS-RELATED GTP-BINDING PROTEIN RAB11 [Encephalitozoon cuniculi
GB-M1]
Length = 234
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +DYLFK+VLIGDS VGK+NLLS+ TRNEF +SK+TIGVEF T T ++
Sbjct: 29 ENFDYLFKIVLIGDSAVGKTNLLSKLTRNEFHKDSKATIGVEFGTITFKI 78
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D+ DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 8 DKAEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI 58
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
E +YLFKVV+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++ +
Sbjct: 8 ETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDING 59
>gi|449268766|gb|EMC79614.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 62
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/38 (92%), Positives = 37/38 (97%)
Query: 19 GDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
GDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 GDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 38
>gi|429962854|gb|ELA42398.1| small GTP-binding protein domain protein [Vittaforma corneae ATCC
50505]
Length = 211
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 43/55 (78%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
M A E +DYLFK+V+IGD+ VGK+N++SR R+EF SKSTIGV+FAT+T +
Sbjct: 1 MKDEAQERFDYLFKIVIIGDANVGKTNIISRLVRDEFIEHSKSTIGVDFATKTFK 55
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +YLFKVV+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+++ +
Sbjct: 8 ETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDI 57
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 5 ADEE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+DEE +YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++++
Sbjct: 3 SDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEI 56
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/53 (66%), Positives = 43/53 (81%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
R D LFK+VLIGDSGVGK+NL SRFT +EF LESKSTIGV+FAT+ +++
Sbjct: 3 RKDSNIGLLFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKI 55
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 42/50 (84%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
ADE DY+FK+V+ GDSGVGKS LL+RF +NEF ++SK TIG+EF TRT+
Sbjct: 8 ADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTV 57
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 8 DRSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDI 58
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
++ DY+FKVVLIGDS VGKS +L+R+ R+EF L+SK+TIGVEF TRTL + + S
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKS 65
>gi|303388958|ref|XP_003072712.1| RAS-related GTP-binding protein Rab11 [Encephalitozoon
intestinalis ATCC 50506]
gi|303301854|gb|ADM11352.1| RAS-related GTP-binding protein Rab11 [Encephalitozoon
intestinalis ATCC 50506]
Length = 236
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +DYLFK+VLIGDS VGK+NLLS+ TRNEF +SK+TIGVEF T T ++
Sbjct: 30 ENFDYLFKIVLIGDSAVGKTNLLSKLTRNEFHKDSKATIGVEFGTITFKI 79
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ +++
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEI 58
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 46/58 (79%), Gaps = 2/58 (3%)
Query: 1 MARRADEEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA ++EE DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ +++
Sbjct: 1 MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEI 58
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFS 60
++ DY+FKVVLIGDS VGKS +L+R+ R+EF L+SK+TIGVEF TRTL + + S
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKS 65
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF + SK+TIGVEF T+ L++
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEI 57
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M + D +YLFK+VLIGDS VGKSNLLSRF+R+EF SK+TIGVEF T+ +++
Sbjct: 1 MGKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEI 56
>gi|396081211|gb|AFN82829.1| RAS-related GTP-binding protein Rab11 [Encephalitozoon romaleae
SJ-2008]
Length = 235
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +DYLFK+VLIGDS VGK+NLL++ TRNEF +SK+TIGVEF T T ++
Sbjct: 30 ENFDYLFKIVLIGDSAVGKTNLLAKLTRNEFYKDSKATIGVEFGTITFKI 79
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 45/52 (86%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
E+YD L+K+VLIGDSGVGK+N+L++FTR EF +SK+TIGVEFA++ + + +
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDD 57
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M + D +YLFK+VLIGDS VGKSNLLSRF+R+EF SK+TIGVEF T+ +++
Sbjct: 1 MGKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEI 56
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF + SK+TIGVEF T+ L++
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEI 57
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA + +YLFK+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+ +++
Sbjct: 1 MAENGEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEI 56
>gi|384501465|gb|EIE91956.1| hypothetical protein RO3G_16667 [Rhizopus delemar RA 99-880]
Length = 187
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 42/53 (79%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
D+EYDYL+K+VL GDSGVGKSN++SRF RNEF L + T GV+F T+TL N
Sbjct: 2 DDEYDYLYKLVLTGDSGVGKSNVVSRFARNEFDLVYRKTYGVDFTTKTLGTDN 54
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 43/51 (84%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
R ++YDY +K+V+IGDSGVGK+N++++FTR EF E+K+T+GVEFA + L
Sbjct: 2 RNSDDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQL 52
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 11 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+LFKVVLIG SG G+SNLLSRF RNEF L+SKST G++FATR++QV
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQV 46
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
E DY+FKVV++GDS VGK+ LL RF ++EF L+SKSTIGVEF TRTL
Sbjct: 21 EIDYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTL 67
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 43/51 (84%)
Query: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
R ++YDY +K+V+IGDSGVGK+N++++FTR EF E+K+T+GVEFA + L
Sbjct: 2 RNSDDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQL 52
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 39/48 (81%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
+ DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ L
Sbjct: 9 QSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKL 56
>gi|378755008|gb|EHY65036.1| GTP-binding protein ypt3 [Nematocida sp. 1 ERTm2]
Length = 210
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR 52
RR ++EY+YL+K+VLIGDSGVGK+NLL R N F +KSTIGVEF T+
Sbjct: 6 RREEQEYEYLYKIVLIGDSGVGKTNLLERLAHNRFNTNTKSTIGVEFDTK 55
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes
speratus]
Length = 200
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+VLIGDSGVGKSNLL R+T+NEF LESKSTIGVEFAT+++Q N
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDN 44
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 39/47 (82%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI 58
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 39/47 (82%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI 58
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++++
Sbjct: 53 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEI 99
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+ + +
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDI 57
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+E +YLFK+V+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+ + +
Sbjct: 2 GEEGEEYLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDI 53
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DY+FKVVLIGDS VGKSNLL+R+ RNEF SK+TIGVEF T+++++
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRI 57
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 39/47 (82%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDI 58
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++++
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEI 56
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e;
AltName: Full=Ras-related protein Ara-1; Flags:
Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++++
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEI 56
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 39/47 (82%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI 58
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 38/43 (88%)
Query: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
K L DSGVGKSNLLSRFTRNEF L+SKSTIGVEFATR++QV
Sbjct: 7 KPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 49
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
+EYDY+FKVV+IGDSGVGKS LL F RN LESKSTIGVEFATR+++
Sbjct: 6 KEYDYVFKVVVIGDSGVGKSQLLMGFARNH-NLESKSTIGVEFATRSIR 53
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 43/48 (89%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
E+YD L+K+VLIGDSGVGK+N+L++FTR EF +SK+TIGVEFA++ +
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNV 53
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 41/47 (87%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DY+FKVVLIGDS VGKSNLL+R+ RNEF SK+TIGVEF T+++++
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRI 57
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E +YLFKVV+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++ +
Sbjct: 8 EAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAI 57
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 14/63 (22%)
Query: 8 EYDYLFK--------------VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRT 53
EY YLFK VVLIG+ GVGKSNLLSRFTRNEF L+SK TIGVEFAT+
Sbjct: 4 EYYYLFKSNFIFQNFKRQIISVVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKI 63
Query: 54 LQV 56
+ V
Sbjct: 64 ISV 66
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis
thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis
thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+ +++
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEI 56
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
D + LFK+VLIGDSGVGK+NL SRFT EF LESKSTIGV+FAT+ + +
Sbjct: 5 DPQLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVI 55
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+ +++
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEI 56
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+ +++
Sbjct: 11 EYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEI 57
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++ +
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAI 56
>gi|340500662|gb|EGR27525.1| Ras-related protein ric2, putative [Ichthyophthirius multifiliis]
Length = 235
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 41/50 (82%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
YDYL K+VL+GDSGVGKSN+LSRFTR++F +++ STIGVEF R + N
Sbjct: 34 YDYLIKIVLVGDSGVGKSNILSRFTRDQFQIDNCSTIGVEFGQRIITTEN 83
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
DY+FK+V+IGD VGKS LLS F RNEF L+SK TIGVEFATR+++
Sbjct: 11 DYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIR 56
>gi|159117346|ref|XP_001708893.1| Rab11 [Giardia lamblia ATCC 50803]
gi|28628539|gb|AAO49245.1|AF460175_1 GTPase Rab11-like protein [Giardia intestinalis]
gi|157437007|gb|EDO81219.1| Rab11 [Giardia lamblia ATCC 50803]
Length = 216
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 41/50 (82%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ YD+L+K++LIGDS VGKSN+LSRFT N+F S +TIGVEF T+TL V
Sbjct: 3 DAYDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTV 52
>gi|308159460|gb|EFO61990.1| Rab11 [Giardia lamblia P15]
Length = 216
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 41/50 (82%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ YD+L+K++LIGDS VGKSN+LSRFT N+F S +TIGVEF T+TL V
Sbjct: 3 DAYDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTV 52
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 39/47 (82%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVI 58
>gi|253742611|gb|EES99410.1| Rab11 [Giardia intestinalis ATCC 50581]
Length = 216
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 41/50 (82%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ YD+L+K++LIGDS VGKSN+LSRFT N+F S +TIGVEF T+TL V
Sbjct: 3 DAYDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTV 52
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 38/47 (80%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DYLFK+VL GDS VGKSNLL+RF RNEF +SKSTIGVE T+ L +
Sbjct: 12 DYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDI 58
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+ +++
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEI 54
>gi|85002059|gb|ABC68436.1| putative small GTP-binding protein [Tragopogon pratensis]
gi|290796656|gb|ADD64893.1| Rab GTPase-like protein [Tragopogon porrifolius]
gi|291481006|gb|ADE06482.1| putative small GTP-binding protein [Tragopogon porrifolius]
Length = 105
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSRF R+EF L SK+TIGVEF T+ + +
Sbjct: 18 EYLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQVVDI 64
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 39/46 (84%)
Query: 11 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YLFK+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+ +++
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEI 57
>gi|85002057|gb|ABC68435.1| putative small GTP-binding protein [Tragopogon dubius]
Length = 104
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSRF R+EF L SK+TIGVEF T+ + +
Sbjct: 17 EYLFKIVVIGDSAVGKSNLLSRFARDEFDLHSKATIGVEFQTQVVDI 63
>gi|238594944|ref|XP_002393625.1| hypothetical protein MPER_06611 [Moniliophthora perniciosa FA553]
gi|215461391|gb|EEB94555.1| hypothetical protein MPER_06611 [Moniliophthora perniciosa FA553]
Length = 166
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 38/47 (80%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DYLFKVVLIGD VGKSNL SRF RN F S+STIGVE+ATR++ +
Sbjct: 8 DYLFKVVLIGDCDVGKSNLFSRFVRNTFNPASRSTIGVEYATRSINI 54
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes
speratus]
Length = 198
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 39/44 (88%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+VLIGDSGVGKSNLL R+T+ EF LESKSTIGVEFAT+T+Q N
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDN 44
>gi|242087243|ref|XP_002439454.1| hypothetical protein SORBIDRAFT_09g006665 [Sorghum bicolor]
gi|241944739|gb|EES17884.1| hypothetical protein SORBIDRAFT_09g006665 [Sorghum bicolor]
Length = 67
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/37 (91%), Positives = 35/37 (94%)
Query: 20 DSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
DSGVGKSNLLSRFTRNEF ESKSTIGVEFATR+LQV
Sbjct: 28 DSGVGKSNLLSRFTRNEFSFESKSTIGVEFATRSLQV 64
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 39/47 (82%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+VLIGDS VGKSNLL+RF RNEF SK+TIGVEF T+ + +
Sbjct: 12 EYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDI 58
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
M + +E +LFK+VLIGDS VGKSN+LSRFT+ +F +S+ TIGVEFATR+L
Sbjct: 1 MDKPPQQEEKHLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSL 54
>gi|397571271|gb|EJK47712.1| hypothetical protein THAOC_33549, partial [Thalassiosira
oceanica]
Length = 35
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/35 (94%), Positives = 33/35 (94%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRN 35
M RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRN
Sbjct: 1 MGSRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRN 35
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 42/49 (85%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
+ + DY+FKVVL+GDS VGK+ LL+RF +N+F ++SK+TIGVEF T+TL
Sbjct: 9 NHKIDYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTL 57
>gi|387592730|gb|EIJ87754.1| GTPase Ypt3 [Nematocida parisii ERTm3]
gi|387595356|gb|EIJ92980.1| GTPase Ypt3 [Nematocida parisii ERTm1]
Length = 206
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR 52
RR ++EY+YL+K+VLIGDS VGK+NLL R N F +KSTIGVEF T+
Sbjct: 2 RREEQEYEYLYKIVLIGDSSVGKTNLLERLAHNRFNTNTKSTIGVEFDTK 51
>gi|146079278|ref|XP_001463744.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|398011473|ref|XP_003858932.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
gi|134067831|emb|CAM66111.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|322497143|emb|CBZ32214.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
Length = 208
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
EE + FK+VLIGDSGVGKSNL++R+T NEF E+ STIGVEF T+++++
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKI 51
>gi|401416870|ref|XP_003872929.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322489155|emb|CBZ24407.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 208
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
EE + FK+VLIGDSGVGKSNL++R+T NEF E+ STIGVEF T+++++
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKI 51
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis
thaliana]
Length = 219
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVE T+ +++
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEI 56
>gi|242078713|ref|XP_002444125.1| hypothetical protein SORBIDRAFT_07g008850 [Sorghum bicolor]
gi|241940475|gb|EES13620.1| hypothetical protein SORBIDRAFT_07g008850 [Sorghum bicolor]
Length = 349
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 1 MARRAD--EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
MA D + +YLFK+VL+GDS VGKSNLL+RF RNE SKSTIGVEF T+ L +
Sbjct: 1 MAYDGDDGQSQNYLFKIVLLGDSSVGKSNLLARFARNELYPNSKSTIGVEFQTQKLVI 58
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 11 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YLFK+V+IGDS VGKSNLLSRF RNEF SK+TIGVEF T+ + +
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDI 59
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 44/53 (83%), Gaps = 2/53 (3%)
Query: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTN 58
+E YDYLF VLIGD+GVGK+N+L+R+ +NEF ++KST+GVEFA++ + + N
Sbjct: 7 EERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDN 57
>gi|157865435|ref|XP_001681425.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
gi|68124721|emb|CAJ02862.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
Length = 208
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
EE + FK+VLIGDSGVGKSNL++R+T NEF E+ STIGVEF T+++++
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKI 51
>gi|440793980|gb|ELR15151.1| Rab11/RabAfamily small GTPase [Acanthamoeba castellanii str.
Neff]
Length = 186
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIG 46
+YD+LFKVVL+GDS VGKSNLLSRFTR+EF L+ KSTIG
Sbjct: 9 PDYDHLFKVVLVGDSAVGKSNLLSRFTRDEFTLDCKSTIG 48
>gi|71030966|ref|XP_765125.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352081|gb|EAN32842.1| GTP-binding protein rab11, putative [Theileria parva]
Length = 232
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 48/60 (80%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVTNFSSFTS 64
ADE+Y++++K++L+GD+ VGKS+LL R+ R + +++K+TIGVEFATRT+ + + S +
Sbjct: 2 ADEDYEHVYKIILLGDATVGKSHLLCRYIRGDLPVQAKATIGVEFATRTVPLASGGSVKA 61
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLL+R+ RNEF SK+TIGVEF T+++ +
Sbjct: 9 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVI 55
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c;
AltName: Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLL+R+ RNEF SK+TIGVEF T+++ +
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLI 56
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 11 YLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YLFK+VLIGDS VGKSNLLSRF RNEF SK+TIGVE T+ +++
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEI 57
>gi|440291835|gb|ELP85077.1| rab11, putative [Entamoeba invadens IP1]
Length = 211
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 40/49 (81%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
E+YD L+K V++GDSG GK+ LL RFTRNEF E KSTIGVEF+++ +Q
Sbjct: 2 EDYDVLYKTVMMGDSGAGKTCLLMRFTRNEFDAEKKSTIGVEFSSKQIQ 50
>gi|358255041|dbj|GAA56733.1| Ras-related protein Rab-11A [Clonorchis sinensis]
Length = 227
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 39/42 (92%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVL+GDSGVGKSNLLSRF +NEF L+S+STIGVEFA++T++
Sbjct: 76 VVLVGDSGVGKSNLLSRFVKNEFNLDSRSTIGVEFASKTVKC 117
>gi|110738857|dbj|BAF01351.1| Ras-related GTP-binding protein [Arabidopsis thaliana]
Length = 147
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+YLFK+V+IGDS VGKSNLL+R+ RNEF SK+TIGVEF T+++ +
Sbjct: 19 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLI 65
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 39/42 (92%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 33 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 74
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 39/41 (95%)
Query: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
+VVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+
Sbjct: 36 RVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTV 76
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 38/43 (88%)
Query: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
+FK+V++GDSGVGKS LL+RF +NEF ++SK TIGVEF TRT+
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTV 43
>gi|126654285|ref|XP_001388407.1| Rablib [Cryptosporidium parvum Iowa II]
gi|126117500|gb|EAZ51600.1| Rablib [Cryptosporidium parvum Iowa II]
Length = 198
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 43/53 (81%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVT 57
+ +EYD+L+K++L+GD+ VGK++LLSR+TR+ + TIGVEFATRT+ ++
Sbjct: 4 SPDEYDHLYKIILVGDATVGKTHLLSRYTRDALPKTPQPTIGVEFATRTVPLS 56
>gi|70953140|ref|XP_745690.1| GTP-binding protein [Plasmodium chabaudi chabaudi]
gi|56526093|emb|CAH77459.1| GTP-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 228
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 43/52 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++EEYD+L+K++L+GD+ VGK++LLSR+ R +K+TIGVEFATRT+ +
Sbjct: 2 SNEEYDHLYKIILVGDATVGKTHLLSRYIRGSLPSVAKATIGVEFATRTIPL 53
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 38/40 (95%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
VVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTV 40
>gi|67623267|ref|XP_667916.1| Rab11b [Cryptosporidium hominis TU502]
gi|54659102|gb|EAL37697.1| Rab11b [Cryptosporidium hominis]
Length = 199
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 43/53 (81%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVT 57
+ +EYD+L+K++L+GD+ VGK++LLSR+TR+ + TIGVEFATRT+ ++
Sbjct: 4 SPDEYDHLYKIILVGDATVGKTHLLSRYTRDALPKTPQPTIGVEFATRTVPLS 56
>gi|58864726|emb|CAI51864.1| Rab11B protein [Plasmodium falciparum]
Length = 229
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 43/52 (82%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
++EEYD+L+K++L+GD+ VGK++LLSR+ R +K+TIGVEFATRT+ +
Sbjct: 2 SNEEYDHLYKIILVGDATVGKTHLLSRYIRGSLPSVAKATIGVEFATRTIPL 53
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
E + ++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATRT++
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIE 51
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 39/42 (92%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
VVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML 42
>gi|440790656|gb|ELR11936.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 41/56 (73%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M A + DYL K+V++GDSGVGKSN++SRFT + F SK+TIGV FAT+ + V
Sbjct: 1 MNSDASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAV 56
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 38/40 (95%)
Query: 15 VVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTL 54
VVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTV 40
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
E + ++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATRT++
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIE 51
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
E + ++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATRT++
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIE 51
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 8 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
E + ++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATRT++
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIE 51
>gi|384501469|gb|EIE91960.1| hypothetical protein RO3G_16671 [Rhizopus delemar RA 99-880]
Length = 60
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YD L+K++L GDSGVGKSN +SRF NEF LE + T+G++FA +TL++
Sbjct: 5 YDNLYKLILTGDSGVGKSNAMSRFASNEFDLEYRKTVGIQFAGKTLKI 52
>gi|440800473|gb|ELR21511.1| Rab GTPase, putative [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 41/56 (73%)
Query: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
M A + DYL K+V++GDSGVGKSN++SRFT + F SK+TIGV FAT+ + V
Sbjct: 1 MNSDASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAV 56
>gi|221058599|ref|XP_002259945.1| GTP-binding protein [Plasmodium knowlesi strain H]
gi|193810018|emb|CAQ41212.1| GTP-binding protein, putative [Plasmodium knowlesi strain H]
Length = 229
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 42/52 (80%)
Query: 5 ADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ EEYD+L+K++L+GD+ VGK++LLSR+ R +K+TIGVEFATRT+ +
Sbjct: 2 SSEEYDHLYKIILVGDATVGKTHLLSRYIRGSLPSVAKATIGVEFATRTIPL 53
>gi|3004649|gb|AAC09072.1| putative GTP-binding protein RAB11 [Trypanosoma cruzi]
Length = 218
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 42/50 (84%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
E+ + FKVV+IGDSGVGKSNL++R+T NEF ++ +TIGVEF T+++++
Sbjct: 2 EDTNLTFKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKI 51
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 40/46 (86%)
Query: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ 55
D L+KVV+IGDSGVGKSNL++RFT+N+F ++K TIGVEF ++++
Sbjct: 4 DVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIE 49
>gi|389584928|dbj|GAB67659.1| small GTPase rab11b, partial [Plasmodium cynomolgi strain B]
Length = 229
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
EEYD+L+K++L+GD+ VGK++LLSR+ R +K+TIGVEFATRT+ +
Sbjct: 4 EEYDHLYKIILVGDATVGKTHLLSRYIRGSLPSVAKATIGVEFATRTIPL 53
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
YDYLFK+VL+GD GVGK+ + +R+T +EF +SKSTIGVEFA +T+ +
Sbjct: 3 YDYLFKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNI 50
>gi|156096310|ref|XP_001614189.1| small GTPase rab11b [Plasmodium vivax Sal-1]
gi|148803063|gb|EDL44462.1| small GTPase rab11b, putative [Plasmodium vivax]
Length = 229
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV 56
EEYD+L+K++L+GD+ VGK++LLSR+ R +K+TIGVEFATRT+ +
Sbjct: 4 EEYDHLYKIILVGDATVGKTHLLSRYIRGSLPSVAKATIGVEFATRTIPL 53
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.136 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 900,189,550
Number of Sequences: 23463169
Number of extensions: 24697892
Number of successful extensions: 282295
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9838
Number of HSP's successfully gapped in prelim test: 450
Number of HSP's that attempted gapping in prelim test: 272321
Number of HSP's gapped (non-prelim): 10319
length of query: 68
length of database: 8,064,228,071
effective HSP length: 40
effective length of query: 28
effective length of database: 7,125,701,311
effective search space: 199519636708
effective search space used: 199519636708
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)