BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035304
MNDWAAPLIAAALFAFLSPGLVVQMPAKNRAVDFLNMKTSIAAIFVHTVLYGLFLILFLV
ILNVHLFI

High Scoring Gene Products

Symbol, full name Information P value
AT5G40960 protein from Arabidopsis thaliana 6.8e-08
AT3G48660 protein from Arabidopsis thaliana 1.9e-05
AT5G63500 protein from Arabidopsis thaliana 8.1e-05
AT3G27027 protein from Arabidopsis thaliana 0.00010
AT3G27030 protein from Arabidopsis thaliana 0.00017
AT5G40980 protein from Arabidopsis thaliana 0.00035
AT5G08391 protein from Arabidopsis thaliana 0.00093

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035304
        (68 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2162981 - symbol:AT5G40960 "AT5G40960" species...   123  6.8e-08   1
TAIR|locus:2114550 - symbol:AT3G48660 "AT3G48660" species...   100  1.9e-05   1
TAIR|locus:2167341 - symbol:AT5G63500 "AT5G63500" species...    94  8.1e-05   1
TAIR|locus:4515103138 - symbol:AT3G27027 "AT3G27027" spec...    93  0.00010   1
TAIR|locus:2091985 - symbol:AT3G27030 "AT3G27030" species...    91  0.00017   1
TAIR|locus:2163006 - symbol:AT5G40980 "AT5G40980" species...    88  0.00035   1
TAIR|locus:4515103540 - symbol:AT5G08391 "AT5G08391" spec...    84  0.00093   1


>TAIR|locus:2162981 [details] [associations]
            symbol:AT5G40960 "AT5G40960" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0031225 "anchored to
            membrane" evidence=TAS] EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0031225 EMBL:AB010072 HOGENOM:HOG000237395
            ProtClustDB:CLSN2686203 InterPro:IPR021775 Pfam:PF11820
            EMBL:AY085889 EMBL:BT024518 IPI:IPI00546210 RefSeq:NP_198912.1
            UniGene:At.64266 EnsemblPlants:AT5G40960.1 GeneID:834098
            KEGG:ath:AT5G40960 TAIR:At5g40960 eggNOG:NOG292304
            InParanoid:Q9FLN3 OMA:QFPGKES PhylomeDB:Q9FLN3
            Genevestigator:Q9FLN3 Uniprot:Q9FLN3
        Length = 68

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query:     1 MNDWXXXXXXXXXXXXXSPGLVVQMPAKNRAVDFLNMKTSIAAIFVHT 48
             M+DW             SPGL++Q P K   V F+NMKT++A+IFVHT
Sbjct:     1 MHDWAAPLIASALFAFLSPGLILQFPGKESPVGFMNMKTTVASIFVHT 48


>TAIR|locus:2114550 [details] [associations]
            symbol:AT3G48660 "AT3G48660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL133315 HOGENOM:HOG000237395
            ProtClustDB:CLSN2686203 InterPro:IPR021775 Pfam:PF11820
            IPI:IPI00516538 PIR:T46210 RefSeq:NP_190435.1 UniGene:At.53835
            EnsemblPlants:AT3G48660.1 GeneID:824026 KEGG:ath:AT3G48660
            TAIR:At3g48660 eggNOG:NOG289017 InParanoid:Q9SMN3 OMA:GTMHTSG
            PhylomeDB:Q9SMN3 Genevestigator:Q9SMN3 Uniprot:Q9SMN3
        Length = 89

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query:     1 MNDWXXXXXXXXXXXXXSPGLVVQMPAKNRAVDFLNMKTSIAAIFVHT 48
             M DW             +PGL+ Q+PA+ R V+F NM+TS A+I VHT
Sbjct:     1 MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHT 48


>TAIR|locus:2167341 [details] [associations]
            symbol:AT5G63500 "AT5G63500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0031225 "anchored to
            membrane" evidence=TAS] EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AB007649 GO:GO:0031225 HOGENOM:HOG000237395
            ProtClustDB:CLSN2686203 InterPro:IPR021775 Pfam:PF11820
            EMBL:BT004652 EMBL:AK118015 IPI:IPI00532156 RefSeq:NP_201155.1
            UniGene:At.28995 PRIDE:Q9FMV2 EnsemblPlants:AT5G63500.1
            GeneID:836469 KEGG:ath:AT5G63500 TAIR:At5g63500 eggNOG:NOG328540
            InParanoid:Q9FMV2 OMA:ASIVVHA PhylomeDB:Q9FMV2
            Genevestigator:Q9FMV2 Uniprot:Q9FMV2
        Length = 69

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 21/47 (44%), Positives = 26/47 (55%)

Query:     1 MNDWXXXXXXXXXXXXXSPGLVVQMPAKNRAVDFLNMKTSIAAIFVH 47
             M DW             SPGL+ Q+PA  R V+F NM+TS A+I VH
Sbjct:     1 MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVH 47


>TAIR|locus:4515103138 [details] [associations]
            symbol:AT3G27027 "AT3G27027" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AB026649 IPI:IPI00892292
            RefSeq:NP_001118713.1 UniGene:At.73642 EnsemblPlants:AT3G27027.1
            GeneID:6240602 KEGG:ath:AT3G27027 TAIR:At3g27027 eggNOG:NOG312830
            HOGENOM:HOG000237395 OMA:HAVIFFC PhylomeDB:B3H5H0
            ProtClustDB:CLSN2686203 Genevestigator:B3H5H0 InterPro:IPR021775
            Pfam:PF11820 Uniprot:B3H5H0
        Length = 69

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 20/45 (44%), Positives = 24/45 (53%)

Query:     3 DWXXXXXXXXXXXXXSPGLVVQMPAKNRAVDFLNMKTSIAAIFVH 47
             DW             SPGL+ Q+PA+ R V+F NM TS  AI VH
Sbjct:     4 DWGPVIVAVSLFILLSPGLLFQLPARTRVVEFGNMTTSGIAILVH 48


>TAIR|locus:2091985 [details] [associations]
            symbol:AT3G27030 "AT3G27030" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686 InterPro:IPR021775
            Pfam:PF11820 IPI:IPI00544485 RefSeq:NP_189339.1 UniGene:At.37116
            EnsemblPlants:AT3G27030.1 GeneID:822321 KEGG:ath:AT3G27030
            OMA:ALQIHIC Uniprot:F4JEW3
        Length = 142

 Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
 Identities = 20/48 (41%), Positives = 24/48 (50%)

Query:     1 MNDWXXXXXXXXXXXXXSPGLVVQMPAKNRAVDFLNMKTSIAAIFVHT 48
             M DW             SPGL+  +P  NR VDF  +KT+  AI VHT
Sbjct:    74 MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHT 121

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 16/48 (33%), Positives = 25/48 (52%)

Query:     1 MNDWXXXXXXXXXXXXXSPGLVVQMPAKNRAVDFLNMKTSIAAIFVHT 48
             M DW             +PGL++Q+P + R V+F   +TS  ++ VHT
Sbjct:     1 MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHT 48


>TAIR|locus:2163006 [details] [associations]
            symbol:AT5G40980 "AT5G40980" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0031225 "anchored to
            membrane" evidence=TAS] EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0031225 EMBL:AB010072 HOGENOM:HOG000237395
            ProtClustDB:CLSN2686203 InterPro:IPR021775 Pfam:PF11820
            EMBL:BT011596 EMBL:BT012231 IPI:IPI00546011 RefSeq:NP_198914.1
            UniGene:At.30260 UniGene:At.68530 EnsemblPlants:AT5G40980.1
            GeneID:834100 KEGG:ath:AT5G40980 TAIR:At5g40980 eggNOG:NOG268649
            InParanoid:Q9FLN1 OMA:LVHAILY PhylomeDB:Q9FLN1
            Genevestigator:Q9FLN1 Uniprot:Q9FLN1
        Length = 69

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 18/45 (40%), Positives = 24/45 (53%)

Query:     3 DWXXXXXXXXXXXXXSPGLVVQMPAKNRAVDFLNMKTSIAAIFVH 47
             DW             SPGL+ Q+PA+ R ++F NM TS  +I VH
Sbjct:     4 DWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVH 48


>TAIR|locus:4515103540 [details] [associations]
            symbol:AT5G08391 "AT5G08391" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR HOGENOM:HOG000237395
            ProtClustDB:CLSN2686203 InterPro:IPR021775 Pfam:PF11820
            EMBL:AY086935 IPI:IPI00518238 RefSeq:NP_001119192.1
            UniGene:At.71245 EnsemblPlants:AT5G08391.1 GeneID:6241429
            KEGG:ath:AT5G08391 TAIR:At5g08391 eggNOG:NOG285011 OMA:KIHIYIG
            PhylomeDB:Q8LBX6 Genevestigator:Q8LBX6 Uniprot:Q8LBX6
        Length = 69

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 15/48 (31%), Positives = 26/48 (54%)

Query:     1 MNDWXXXXXXXXXXXXXSPGLVVQMPAKNRAVDFLNMKTSIAAIFVHT 48
             M+DW             +PGL+ Q+P + + V+F N +TS  ++ VH+
Sbjct:     1 MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHS 48


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.131   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       68        35   0.00091  102 3  11 22  0.49    24
                                                     29  0.44    22


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  392 (42 KB)
  Total size of DFA:  61 KB (2058 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  4.89u 0.24s 5.13t   Elapsed:  00:00:00
  Total cpu time:  4.89u 0.24s 5.13t   Elapsed:  00:00:00
  Start:  Fri May 10 07:24:19 2013   End:  Fri May 10 07:24:19 2013

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