BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035311
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM OS=Arabidopsis thaliana
GN=GN PE=1 SV=1
Length = 1451
Score = 109 bits (272), Expect = 5e-24, Method: Composition-based stats.
Identities = 49/63 (77%), Positives = 54/63 (85%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAGFPEITQSCWIDLMRS 60
MTEEDFIR+N HINGGNDLPREFLS+L+HSIC NEI TTPEQ AGFPE+T S WIDLM
Sbjct: 710 MTEEDFIRNNRHINGGNDLPREFLSELFHSICNNEIRTTPEQGAGFPEMTPSRWIDLMHK 769
Query: 61 LRK 63
+K
Sbjct: 770 SKK 772
>sp|Q9FLY5|GNL1_ARATH ARF guanine-nucleotide exchange factor GNL1 OS=Arabidopsis thaliana
GN=GNL1 PE=3 SV=1
Length = 1443
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAGFPEITQSCWIDLM 58
MTEEDFIR+N INGG DLPRE+LS++YHSI +EI ++ GF +T S WI ++
Sbjct: 710 MTEEDFIRNNRTINGGADLPREYLSEIYHSIRHSEIQMDEDKGTGFQLMTASRWISVI 767
>sp|F4K2K3|GNL2_ARATH ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana
GN=GNL2 PE=2 SV=1
Length = 1375
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAGFPEITQSCWIDLM 58
MTE++FIR+N IN GNDLP+E+LS+L+ SI N + +G E+ + WI+LM
Sbjct: 643 MTEDEFIRNNRAINAGNDLPKEYLSELFQSIATNAFALSTH--SGPVEMNPNRWIELM 698
>sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1
OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1
Length = 1687
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAGFPEITQSCWIDLMRS 60
MT+ DFIR+N I+ G DLP E+L LY + NEI + + A PE QS ++ +
Sbjct: 686 MTKADFIRNNRGIDDGKDLPEEYLGALYDQVVINEIKMSSDSSA--PESRQSNGLNKLLG 743
Query: 61 LRKQLHLL 68
L L+L+
Sbjct: 744 LDGILNLV 751
>sp|Q9LPC5|BIG3_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 3
OS=Arabidopsis thaliana GN=BIG3 PE=1 SV=1
Length = 1750
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEI-----GTTPEQ 42
MT + FIR+N I+ G DLP E+L LY I +NEI G P+Q
Sbjct: 755 MTADGFIRNNRGIDDGKDLPEEYLRALYERISRNEIKMKDDGLGPQQ 801
>sp|Q54KA7|SECG_DICDI Ankyrin repeat, PH and SEC7 domain containing protein secG
OS=Dictyostelium discoideum GN=secG PE=2 SV=1
Length = 986
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEI 36
MT+ +F+R+N IN G+DLP +F+ LY I NEI
Sbjct: 737 MTKAEFLRNNSGINSGDDLPPDFMENLYDKIVTNEI 772
>sp|F4JN05|BIG4_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 4
OS=Arabidopsis thaliana GN=BIG4 PE=2 SV=1
Length = 1706
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEI 36
MT+ DF+R+N I+ G DLP E+L LY + K EI
Sbjct: 709 MTKADFVRNNRGIDDGKDLPEEYLGSLYDRVVKEEI 744
>sp|Q9P7V5|SEC7B_SCHPO Protein transport protein sec72 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec72 PE=1 SV=1
Length = 1822
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQ 42
MT+EDFI++N IN G DL ++L +Y I KNEI +Q
Sbjct: 856 MTKEDFIKNNRGINDGADLDEDYLGFVYDDILKNEIAMKDDQ 897
>sp|Q9UT02|SEC7A_SCHPO Protein transport protein sec71 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec71 PE=1 SV=1
Length = 1811
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQ--CAGFPEI 49
MT +DFI++N ++ G +L FL+++Y I KNEI EQ + FPEI
Sbjct: 847 MTCQDFIKNNRGVDDGANLSDSFLTEVYEEIQKNEIVLKDEQDPTSNFPEI 897
>sp|P11075|SEC7_YEAST Protein transport protein SEC7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC7 PE=1 SV=2
Length = 2009
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQ 42
M+ ++F+ +N I+ G DLPR+FL L++ I NEI EQ
Sbjct: 975 MSLQEFLENNEGIDNGRDLPRDFLEGLFNEIANNEIKLISEQ 1016
>sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2
OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1
Length = 1793
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEI 36
M+ +DFIR+N I+ G DLP +++ LY I K+EI
Sbjct: 764 MSADDFIRNNRGIDDGKDLPADYMRSLYERITKHEI 799
>sp|Q9P7R8|YHV3_SCHPO Uncharacterized protein C211.03 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC211.03c PE=1 SV=1
Length = 1462
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
MT +DF R+ +N G D R FLS++Y +I +NEI E
Sbjct: 697 MTLDDFCRNVRGVNDGQDFDRNFLSEIYKAIKENEIIVAEE 737
>sp|O46382|BIG1_BOVIN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Bos
taurus GN=ARFGEF1 PE=1 SV=1
Length = 1849
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIG 37
MT+E +I+ N IN DLP E+LS +Y+ I +I
Sbjct: 847 MTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKIS 883
>sp|Q9Y6D6|BIG1_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo
sapiens GN=ARFGEF1 PE=1 SV=2
Length = 1849
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIG 37
MT+E +I+ N IN DLP E+LS +Y+ I +I
Sbjct: 847 MTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKIS 883
>sp|D4A631|BIG1_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 1
OS=Rattus norvegicus GN=Arfgef1 PE=1 SV=1
Length = 1846
Score = 37.4 bits (85), Expect = 0.031, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEI 36
MT+E +I+ N IN DLP E+LS +Y+ I +I
Sbjct: 844 MTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKI 879
>sp|G3X9K3|BIG1_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus
musculus GN=Arfgef1 PE=2 SV=1
Length = 1846
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEI 36
MT+E +I+ N IN DLP E+LS +Y+ I +I
Sbjct: 844 MTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKI 879
>sp|O43739|CYH3_HUMAN Cytohesin-3 OS=Homo sapiens GN=CYTH3 PE=2 SV=2
Length = 400
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 TEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
T E FI N IN G DLP E L LY SI KNE PE
Sbjct: 214 TAERFIAMNRGINEGGDLPEELLRNLYESI-KNEPFKIPE 252
>sp|O08967|CYH3_MOUSE Cytohesin-3 OS=Mus musculus GN=Cyth3 PE=1 SV=1
Length = 399
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 TEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
T E FI N IN G DLP E L LY SI KNE PE
Sbjct: 214 TAERFITMNRGINEGGDLPEELLRNLYESI-KNEPFKIPE 252
>sp|P97696|CYH3_RAT Cytohesin-3 OS=Rattus norvegicus GN=Cyth3 PE=2 SV=1
Length = 400
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 TEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
T E FI N IN G DLP E L LY SI KNE PE
Sbjct: 214 TAERFITMNRGINEGGDLPEELLRNLYESI-KNEPFKIPE 252
>sp|P97694|CYH1_RAT Cytohesin-1 OS=Rattus norvegicus GN=Cyth1 PE=1 SV=1
Length = 398
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 TEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
T E FI N IN G DLP E L LY SI KNE PE
Sbjct: 210 TVERFIAMNRGINDGGDLPEELLRNLYESI-KNEPFKIPE 248
>sp|Q9QX11|CYH1_MOUSE Cytohesin-1 OS=Mus musculus GN=Cyth1 PE=2 SV=2
Length = 398
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 TEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
T E FI N IN G DLP E L LY SI KNE PE
Sbjct: 210 TVERFIAMNRGINDGGDLPEELLRNLYESI-KNEPFKIPE 248
>sp|Q15438|CYH1_HUMAN Cytohesin-1 OS=Homo sapiens GN=CYTH1 PE=1 SV=1
Length = 398
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 TEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
T E FI N IN G DLP E L LY SI KNE PE
Sbjct: 210 TVERFIAMNRGINDGGDLPEELLRNLYESI-KNEPFKIPE 248
>sp|Q76MZ1|CYH1_CHLAE Cytohesin-1 OS=Chlorocebus aethiops GN=CYTH1 PE=2 SV=1
Length = 398
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 2 TEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
T E FI N IN G DLP E L LY SI KNE PE
Sbjct: 210 TVERFIAMNRGINDGGDLPEELLRNLYESI-KNEPFKIPE 248
>sp|Q7TSU1|BIG2_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 2
OS=Rattus norvegicus GN=Arfgef2 PE=1 SV=1
Length = 1791
Score = 36.2 bits (82), Expect = 0.069, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSI 31
MT+E +I+ N IN DLP E+LS +Y I
Sbjct: 799 MTKEQYIKMNRGINDSKDLPEEYLSSIYEEI 829
>sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo
sapiens GN=ARFGEF2 PE=1 SV=3
Length = 1785
Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSI 31
MT+E +I+ N IN DLP E+LS +Y I
Sbjct: 792 MTKEQYIKMNRGINDSKDLPEEYLSSIYEEI 822
>sp|Q92538|GBF1_HUMAN Golgi-specific brefeldin A-resistance guanine nucleotide exchange
factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2
Length = 1859
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAGF 46
MT E+F ++ +NGG D ++ L +YH+I KNE PE+ G
Sbjct: 849 MTLEEFRKNLKGVNGGKDFEQDILEDMYHAI-KNEEIVMPEEQTGL 893
>sp|Q9R1D7|GBF1_CRIGR Golgi-specific brefeldin A-resistance guanine nucleotide exchange
factor 1 OS=Cricetulus griseus GN=GBF1 PE=2 SV=1
Length = 1856
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAGF 46
MT E+F ++ +NGG D ++ L +YH+I KNE PE+ G
Sbjct: 847 MTLEEFRKNLKGVNGGKDFEQDILEDMYHAI-KNEEIVMPEEQTGL 891
>sp|A2A5R2|BIG2_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus
musculus GN=Arfgef2 PE=1 SV=1
Length = 1792
Score = 35.4 bits (80), Expect = 0.092, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSI 31
MT+E +I+ N IN DLP E+LS +Y I
Sbjct: 799 MTKEQYIKMNRGINDSKDLPEEYLSSIYDEI 829
>sp|Q6DN90|IQEC1_HUMAN IQ motif and SEC7 domain-containing protein 1 OS=Homo sapiens
GN=IQSEC1 PE=1 SV=1
Length = 963
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCA 44
M EDFI++ ++ G D+PRE L +Y I K E+ T + +
Sbjct: 677 MKLEDFIKNLRGVDDGEDIPREMLMGIYERIRKRELKTNEDHVS 720
>sp|Q5DTT2|PSD1_MOUSE PH and SEC7 domain-containing protein 1 OS=Mus musculus GN=Psd PE=1
SV=2
Length = 1024
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNE 35
MT DFI + +N G D PRE L LY SI KNE
Sbjct: 673 MTCGDFIGNLEGLNDGGDFPRELLKALYSSI-KNE 706
>sp|A5PKW4|PSD1_HUMAN PH and SEC7 domain-containing protein 1 OS=Homo sapiens GN=PSD PE=2
SV=2
Length = 1024
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNE 35
MT DFI + +N G D PRE L LY SI KNE
Sbjct: 673 MTCGDFIGNLEGLNDGGDFPRELLKALYSSI-KNE 706
>sp|Q9ESQ7|PSD1_RAT PH and SEC7 domain-containing protein 1 OS=Rattus norvegicus GN=Psd
PE=2 SV=1
Length = 649
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNE 35
MT DFI + +N G D PRE L LY SI KNE
Sbjct: 298 MTCGDFIGNLEGLNDGGDFPRELLKALYSSI-KNE 331
>sp|Q2KI41|CYH2_BOVIN Cytohesin-2 OS=Bos taurus GN=CYTH2 PE=2 SV=1
Length = 410
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 4 EDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
E F+ N IN G DLP E L LY SI +NE PE
Sbjct: 211 ERFVAMNRGINEGGDLPEELLRNLYDSI-RNEPFKIPE 247
>sp|Q99418|CYH2_HUMAN Cytohesin-2 OS=Homo sapiens GN=CYTH2 PE=1 SV=2
Length = 400
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 4 EDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
E F+ N IN G DLP E L LY SI +NE PE
Sbjct: 211 ERFVAMNRGINEGGDLPEELLRNLYDSI-RNEPFKIPE 247
>sp|Q76MY7|CYH2_CHLAE Cytohesin-2 OS=Chlorocebus aethiops GN=CYTH2 PE=2 SV=1
Length = 399
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 4 EDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
E F+ N IN G DLP E L LY SI +NE PE
Sbjct: 211 ERFVAMNRGINEGGDLPEELLRNLYDSI-RNEPFKIPE 247
>sp|Q3TES0|IQEC3_MOUSE IQ motif and SEC7 domain-containing protein 3 OS=Mus musculus
GN=Iqsec3 PE=1 SV=1
Length = 1195
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAGFPEITQS 52
M EDFIR+ ++ G D+PRE + +Y I + E+ + + ++ +S
Sbjct: 808 MMLEDFIRNLRGVDDGADIPRELVVGIYERIQQKELKSNEDHVTYVTKVEKS 859
>sp|Q76M68|IQEC3_RAT IQ motif and SEC7 domain-containing protein 3 OS=Rattus norvegicus
GN=Iqsec3 PE=1 SV=1
Length = 1194
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAGFPEITQS 52
M EDFIR+ ++ G D+PRE + +Y I + E+ + + ++ +S
Sbjct: 806 MMLEDFIRNLRGVDDGADIPRELVVGIYERIQQKELKSNEDHVTYVTKVEKS 857
>sp|Q8R0S2|IQEC1_MOUSE IQ motif and SEC7 domain-containing protein 1 OS=Mus musculus
GN=Iqsec1 PE=1 SV=2
Length = 961
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCA 44
M EDF+++ ++ G D+PRE L +Y I K E+ T + +
Sbjct: 675 MKLEDFVKNLRGVDDGEDIPRETLIGIYERIRKRELKTNEDHVS 718
>sp|Q9UPP2|IQEC3_HUMAN IQ motif and SEC7 domain-containing protein 3 OS=Homo sapiens
GN=IQSEC3 PE=2 SV=3
Length = 1182
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAGFPEITQS 52
M EDFIR+ ++ G D+PRE + +Y I + E+ + + ++ +S
Sbjct: 804 MMLEDFIRNLRGVDDGADIPRELVVGIYERIQQKELKSNEDHVTYVTKVEKS 855
>sp|Q80YW0|CYH4_MOUSE Cytohesin-4 OS=Mus musculus GN=Cyth4 PE=2 SV=1
Length = 393
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 4 EDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAG 45
E F+ N IN G+DLP E L L+ SI K+E + PE G
Sbjct: 211 ERFVTMNRGINSGSDLPEEQLRNLFDSI-KSEPFSIPEDDGG 251
>sp|P63034|CYH2_MOUSE Cytohesin-2 OS=Mus musculus GN=Cyth2 PE=1 SV=2
Length = 400
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 4 EDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
E F+ N IN G DLP + L LY SI +NE PE
Sbjct: 211 ERFVAMNRGINEGGDLPEDLLRNLYDSI-RNEPFKIPE 247
>sp|P63035|CYH2_RAT Cytohesin-2 OS=Rattus norvegicus GN=Cyth2 PE=1 SV=1
Length = 400
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 4 EDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
E F+ N IN G DLP + L LY SI +NE PE
Sbjct: 211 ERFVAMNRGINEGGDLPEDLLRNLYDSI-RNEPFKIPE 247
>sp|P47102|GEA1_YEAST ARF guanine-nucleotide exchange factor 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GEA1 PE=1
SV=1
Length = 1408
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCAGFPEITQSCWIDLMRS 60
MT +D+ + G D PR +L K+Y SI EI PE+ G + W +L+ S
Sbjct: 713 MTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEI-VMPEEHHGNERWFEDAWNNLISS 771
>sp|Q9UIA0|CYH4_HUMAN Cytohesin-4 OS=Homo sapiens GN=CYTH4 PE=2 SV=1
Length = 394
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 4 EDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPE 41
E F+ N IN G+DLP + L L+ SI K+E + PE
Sbjct: 211 ERFVSMNRGINNGSDLPEDQLRNLFDSI-KSEPFSIPE 247
>sp|Q5DU25|IQEC2_MOUSE IQ motif and SEC7 domain-containing protein 2 OS=Mus musculus
GN=Iqsec2 PE=1 SV=3
Length = 1478
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCA 44
M +DFI++ ++ G D+PR+ L +Y I E+ T + +
Sbjct: 896 MKLDDFIKNLRGVDNGEDIPRDLLVGIYQRIQGRELRTNDDHVS 939
>sp|Q5JU85|IQEC2_HUMAN IQ motif and SEC7 domain-containing protein 2 OS=Homo sapiens
GN=IQSEC2 PE=1 SV=1
Length = 1478
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 1 MTEEDFIRSNGHINGGNDLPREFLSKLYHSICKNEIGTTPEQCA 44
M +DFI++ ++ G D+PR+ L +Y I E+ T + +
Sbjct: 896 MKLDDFIKNLRGVDNGEDIPRDLLVGIYQRIQGRELRTNDDHVS 939
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,918,609
Number of Sequences: 539616
Number of extensions: 919759
Number of successful extensions: 1546
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1501
Number of HSP's gapped (non-prelim): 47
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)