BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035316
MAMKSALKSIRERGLGSFLRELKEEGFLRALLDGNLMQTKLHNRGATLVGVDKFGNKYYQ
KLDEQFGQ

High Scoring Gene Products

Symbol, full name Information P value
AT3G03100 protein from Arabidopsis thaliana 9.0e-22

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035316
        (68 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2097765 - symbol:AT3G03100 species:3702 "Arabi...   254  9.0e-22   1
ASPGD|ASPL0000048093 - symbol:AN2260 species:162425 "Emer...    87  0.00045   1


>TAIR|locus:2097765 [details] [associations]
            symbol:AT3G03100 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0008137 "NADH
            dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0009055
            "electron carrier activity" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=ISS]
            [GO:0005747 "mitochondrial respiratory chain complex I"
            evidence=IDA] [GO:0050897 "cobalt ion binding" evidence=IDA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0051788 "response to misfolded protein" evidence=RCA]
            [GO:0080129 "proteasome core complex assembly" evidence=RCA]
            InterPro:IPR007763 Pfam:PF05071 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0009055 GO:GO:0022900
            TCDB:3.D.1.6.3 GO:GO:0050897 GO:GO:0005747 GO:GO:0008137
            EMBL:AC012328 EMBL:AF370349 EMBL:AY062979 EMBL:AY087701
            IPI:IPI00518549 RefSeq:NP_566192.1 UniGene:At.47591 IntAct:Q9M9M9
            STRING:Q9M9M9 PaxDb:Q9M9M9 PRIDE:Q9M9M9 ProMEX:Q9M9M9 DNASU:821104
            EnsemblPlants:AT3G03100.1 GeneID:821104 KEGG:ath:AT3G03100
            GeneFarm:1861 TAIR:At3g03100 eggNOG:NOG146832 HOGENOM:HOG000140337
            InParanoid:Q9M9M9 KO:K11352 OMA:WVEYASK PhylomeDB:Q9M9M9
            ProtClustDB:PLN02732 BioCyc:ARA:AT3G03100-MONOMER
            BioCyc:MetaCyc:AT3G03100-MONOMER Genevestigator:Q9M9M9
            PANTHER:PTHR12910 Uniprot:Q9M9M9
        Length = 159

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 48/66 (72%), Positives = 59/66 (89%)

Query:     4 KSALKSIRERGLGSFLRELKEEGFLRALLDGNLMQTKLHNRGATLVGVDKFGNKYYQKL- 62
             KSAL++IRE+GLG F+R ++EEGF+R L DGNL+QTK+HN GATLVGVDKFGNKYYQKL 
Sbjct:     7 KSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLG 66

Query:    63 DEQFGQ 68
             D Q+G+
Sbjct:    67 DTQYGR 72


>ASPGD|ASPL0000048093 [details] [associations]
            symbol:AN2260 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0016020
            "membrane" evidence=IEA] [GO:0009055 "electron carrier activity"
            evidence=IEA] [GO:0008137 "NADH dehydrogenase (ubiquinone)
            activity" evidence=IEA] InterPro:IPR007763 Pfam:PF05071
            GO:GO:0016020 GO:GO:0009055 EMBL:BN001307 GO:GO:0008137
            PANTHER:PTHR12910 OMA:HIANPTG EnsemblFungi:CADANIAT00008952
            Uniprot:C8VMV8
        Length = 136

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query:    19 LRELKEEGFLRALLDGNLMQTKLHNRGATLVGVDKFGNKYYQKLDEQ 65
             LR L+  GF      G+ MQ     +  TL+G D++GNKYY+ ++E+
Sbjct:     8 LRNLRRIGFKEY---GHQMQYIGDTKAGTLIGTDRYGNKYYENMEEE 51


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.382    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       68        68   0.00091  102 3  11 22  0.44    28
                                                     29  0.38    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  371 (40 KB)
  Total size of DFA:  65 KB (2061 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.78u 0.14s 7.92t   Elapsed:  00:00:01
  Total cpu time:  7.78u 0.14s 7.92t   Elapsed:  00:00:01
  Start:  Fri May 10 07:30:07 2013   End:  Fri May 10 07:30:08 2013

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