Query 035320
Match_columns 67
No_of_seqs 127 out of 1113
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 18:03:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035320.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035320hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4atq_A 4-aminobutyrate transam 99.5 4.2E-14 1.4E-18 100.4 5.1 54 10-63 306-359 (456)
2 4e3q_A Pyruvate transaminase; 99.4 2.1E-13 7.1E-18 97.2 5.7 54 10-63 317-377 (473)
3 4ao9_A Beta-phenylalanine amin 99.3 1.4E-12 4.7E-17 92.8 5.0 54 10-63 298-355 (454)
4 3i5t_A Aminotransferase; pyrid 98.9 1.3E-09 4.4E-14 76.5 5.5 55 9-63 302-363 (476)
5 3hmu_A Aminotransferase, class 98.9 2.1E-09 7.3E-14 75.4 5.4 55 9-63 303-360 (472)
6 4a0g_A Adenosylmethionine-8-am 98.9 4.3E-10 1.5E-14 84.6 1.7 55 9-63 675-735 (831)
7 3tfu_A Adenosylmethionine-8-am 98.8 8.7E-09 3E-13 71.9 5.5 55 9-63 314-373 (457)
8 4ffc_A 4-aminobutyrate aminotr 98.8 7.9E-09 2.7E-13 71.8 5.0 55 9-63 304-358 (453)
9 3oks_A 4-aminobutyrate transam 98.7 8.5E-09 2.9E-13 71.4 4.8 55 9-63 306-360 (451)
10 3gju_A Putative aminotransfera 98.7 1.7E-08 5.8E-13 69.9 5.8 55 9-63 301-362 (460)
11 2yky_A Beta-transaminase; tran 98.2 1.3E-09 4.6E-14 77.4 0.0 55 9-63 310-369 (465)
12 3n5m_A Adenosylmethionine-8-am 98.7 1.9E-08 6.5E-13 69.1 5.6 55 9-63 295-355 (452)
13 3dod_A Adenosylmethionine-8-am 98.7 2E-08 6.8E-13 69.2 5.5 55 9-63 291-352 (448)
14 1z7d_A Ornithine aminotransfer 98.7 2.5E-08 8.5E-13 68.8 5.1 55 9-63 292-346 (433)
15 2oat_A Ornithine aminotransfer 98.7 2.7E-08 9.3E-13 68.8 5.1 55 9-63 303-357 (439)
16 4a6r_A Omega transaminase; tra 98.6 7.9E-09 2.7E-13 71.5 1.7 55 9-63 299-357 (459)
17 3l44_A Glutamate-1-semialdehyd 98.6 4.1E-08 1.4E-12 66.9 4.9 55 9-63 280-337 (434)
18 2e7u_A Glutamate-1-semialdehyd 98.5 1E-07 3.5E-12 64.9 5.2 55 9-63 276-334 (424)
19 4e77_A Glutamate-1-semialdehyd 98.5 1E-07 3.5E-12 64.9 4.8 55 9-63 278-335 (429)
20 2epj_A Glutamate-1-semialdehyd 98.5 1.4E-07 4.9E-12 64.3 4.9 55 9-63 281-338 (434)
21 3i4j_A Aminotransferase, class 98.5 2.4E-07 8.2E-12 63.0 5.3 55 9-63 272-330 (430)
22 3nx3_A Acoat, acetylornithine 98.4 2.9E-07 1E-11 61.7 5.5 54 9-62 258-312 (395)
23 3fq8_A Glutamate-1-semialdehyd 98.4 2.3E-07 7.8E-12 63.1 4.9 56 8-63 276-334 (427)
24 1zod_A DGD, 2,2-dialkylglycine 98.3 6.2E-07 2.1E-11 60.9 5.3 55 9-63 282-338 (433)
25 2cjg_A L-lysine-epsilon aminot 98.3 2.7E-07 9.4E-12 63.8 3.5 54 10-63 307-365 (449)
26 3a8u_X Omega-amino acid--pyruv 98.3 8.4E-07 2.9E-11 60.7 5.5 55 9-63 299-362 (449)
27 2pb2_A Acetylornithine/succiny 98.3 3.5E-07 1.2E-11 62.6 3.5 55 9-63 280-334 (420)
28 2cy8_A D-phgat, D-phenylglycin 98.3 5.9E-07 2E-11 61.7 4.4 54 9-63 279-338 (453)
29 3k28_A Glutamate-1-semialdehyd 98.3 4.3E-07 1.5E-11 62.0 3.6 53 9-62 278-333 (429)
30 3dxv_A Alpha-amino-epsilon-cap 98.3 1.1E-06 3.6E-11 60.0 4.8 53 9-62 280-332 (439)
31 1s0a_A Adenosylmethionine-8-am 98.2 3.5E-06 1.2E-10 57.2 5.6 54 9-62 285-343 (429)
32 1ohv_A 4-aminobutyrate aminotr 98.1 3E-06 1E-10 59.3 4.6 50 13-63 339-388 (472)
33 4adb_A Succinylornithine trans 98.0 1E-05 3.4E-10 54.1 5.2 54 9-62 262-315 (406)
34 1sff_A 4-aminobutyrate aminotr 98.0 9.4E-06 3.2E-10 54.6 4.9 54 9-62 278-331 (426)
35 3ruy_A Ornithine aminotransfer 97.9 2.1E-05 7E-10 52.5 5.1 55 9-63 262-316 (392)
36 2eo5_A 419AA long hypothetical 97.7 1.6E-05 5.5E-10 54.1 2.4 50 9-62 292-341 (419)
37 1vef_A Acetylornithine/acetyl- 97.4 0.0002 6.9E-09 47.7 4.9 54 9-62 264-317 (395)
38 2ord_A Acoat, acetylornithine 97.2 0.00016 5.3E-09 48.4 2.4 52 10-62 263-314 (397)
39 2eh6_A Acoat, acetylornithine 97.1 0.00095 3.2E-08 44.0 5.0 52 9-62 251-302 (375)
40 2w8t_A SPT, serine palmitoyltr 96.3 0.0017 6E-08 44.1 2.0 54 9-62 272-328 (427)
41 3l8a_A METC, putative aminotra 96.1 0.0042 1.4E-07 41.9 3.4 53 9-61 279-335 (421)
42 1yiz_A Kynurenine aminotransfe 95.6 0.0089 3E-07 40.2 3.3 37 9-45 266-302 (429)
43 1fc4_A 2-amino-3-ketobutyrate 95.6 0.011 3.8E-07 39.2 3.6 54 9-62 256-312 (401)
44 2vi8_A Serine hydroxymethyltra 95.6 0.017 6E-07 38.1 4.5 54 9-62 235-292 (405)
45 1gd9_A Aspartate aminotransfer 95.3 0.015 5.1E-07 38.4 3.3 40 9-48 244-283 (389)
46 2r2n_A Kynurenine/alpha-aminoa 94.9 0.031 1.1E-06 37.7 4.1 40 9-48 273-312 (425)
47 3op7_A Aminotransferase class 94.8 0.052 1.8E-06 35.6 5.0 38 9-46 233-270 (375)
48 1bs0_A Protein (8-amino-7-oxon 94.7 0.027 9.1E-07 37.1 3.4 54 9-62 244-302 (384)
49 1j32_A Aspartate aminotransfer 94.5 0.021 7.3E-07 37.6 2.5 37 9-45 248-284 (388)
50 1pff_A Methionine gamma-lyase; 94.4 0.11 3.9E-06 33.4 5.9 54 9-62 157-214 (331)
51 2x5d_A Probable aminotransfera 94.3 0.015 5E-07 39.0 1.5 38 9-46 256-293 (412)
52 1v2d_A Glutamine aminotransfer 94.3 0.015 5.1E-07 38.4 1.4 54 9-62 233-290 (381)
53 2dkj_A Serine hydroxymethyltra 94.0 0.081 2.8E-06 34.9 4.5 54 9-62 235-293 (407)
54 3fdb_A Beta C-S lyase, putativ 93.9 0.034 1.2E-06 36.3 2.5 49 12-60 238-288 (377)
55 3b46_A Aminotransferase BNA3; 93.8 0.042 1.4E-06 37.5 3.0 42 9-50 285-327 (447)
56 3kki_A CAI-1 autoinducer synth 93.5 0.0092 3.1E-07 39.9 -0.7 54 9-62 264-320 (409)
57 2dr1_A PH1308 protein, 386AA l 93.2 0.21 7E-06 32.5 5.4 54 9-62 218-293 (386)
58 2z61_A Probable aspartate amin 93.2 0.022 7.5E-07 37.4 0.6 37 9-45 233-269 (370)
59 3e2y_A Kynurenine-oxoglutarate 93.1 0.068 2.3E-06 35.4 3.0 37 9-45 251-287 (410)
60 1kmj_A Selenocysteine lyase; p 92.9 0.19 6.7E-06 32.8 4.9 54 9-62 235-313 (406)
61 3ke3_A Putative serine-pyruvat 92.8 0.2 6.8E-06 33.3 5.0 35 28-62 250-287 (379)
62 3ezs_A Aminotransferase ASPB; 92.7 0.094 3.2E-06 34.3 3.2 37 9-45 242-278 (376)
63 3fvs_A Kynurenine--oxoglutarat 92.7 0.094 3.2E-06 34.9 3.2 37 9-45 258-294 (422)
64 2o0r_A RV0858C (N-succinyldiam 92.6 0.04 1.4E-06 36.8 1.3 38 9-46 244-281 (411)
65 3tqx_A 2-amino-3-ketobutyrate 92.6 0.085 2.9E-06 34.6 2.9 54 9-62 254-311 (399)
66 3a2b_A Serine palmitoyltransfe 92.5 0.13 4.6E-06 33.9 3.8 54 9-62 251-307 (398)
67 3kgw_A Alanine-glyoxylate amin 92.5 0.36 1.2E-05 31.3 5.8 55 8-62 219-299 (393)
68 1u08_A Hypothetical aminotrans 92.3 0.067 2.3E-06 35.3 2.1 38 9-46 247-284 (386)
69 3g0t_A Putative aminotransfera 92.2 0.077 2.6E-06 35.5 2.3 53 9-61 271-346 (437)
70 1o4s_A Aspartate aminotransfer 92.0 0.033 1.1E-06 37.0 0.4 51 9-60 257-307 (389)
71 2dou_A Probable N-succinyldiam 91.7 0.054 1.9E-06 35.6 1.1 37 9-45 241-277 (376)
72 1cs1_A CGS, protein (cystathio 91.6 0.062 2.1E-06 35.7 1.3 54 9-62 210-266 (386)
73 2zc0_A Alanine glyoxylate tran 91.5 0.21 7.3E-06 33.0 3.8 38 9-46 257-294 (407)
74 1t3i_A Probable cysteine desul 90.8 0.46 1.6E-05 31.2 5.0 55 8-62 239-317 (420)
75 2rfv_A Methionine gamma-lyase; 90.7 0.2 6.7E-06 33.5 3.1 54 9-62 222-279 (398)
76 4dq6_A Putative pyridoxal phos 90.7 0.17 5.9E-06 33.0 2.8 36 10-45 250-287 (391)
77 3h14_A Aminotransferase, class 90.6 0.075 2.6E-06 35.1 0.9 36 9-44 241-276 (391)
78 2o1b_A Aminotransferase, class 90.6 0.14 4.7E-06 34.3 2.3 37 9-45 264-300 (404)
79 2e7j_A SEP-tRNA:Cys-tRNA synth 90.5 0.096 3.3E-06 34.0 1.4 52 9-61 219-280 (371)
80 1vp4_A Aminotransferase, putat 90.5 0.092 3.2E-06 35.3 1.3 38 9-46 270-307 (425)
81 1m32_A 2-aminoethylphosphonate 90.5 0.58 2E-05 30.0 5.1 54 9-62 203-278 (366)
82 2bwn_A 5-aminolevulinate synth 90.2 0.29 1E-05 32.3 3.6 54 9-62 256-314 (401)
83 3dzz_A Putative pyridoxal 5'-p 89.8 0.15 5E-06 33.4 1.9 37 9-45 245-283 (391)
84 3ffh_A Histidinol-phosphate am 89.8 0.53 1.8E-05 30.5 4.6 34 9-44 236-269 (363)
85 1d2f_A MALY protein; aminotran 89.8 0.31 1E-05 32.1 3.4 37 9-45 244-283 (390)
86 2x5f_A Aspartate_tyrosine_phen 89.7 0.34 1.1E-05 32.5 3.6 36 9-44 282-324 (430)
87 1e5e_A MGL, methionine gamma-l 89.6 0.59 2E-05 31.5 4.8 54 9-62 221-278 (404)
88 2zyj_A Alpha-aminodipate amino 89.4 0.099 3.4E-06 34.6 0.8 37 9-45 248-284 (397)
89 3cai_A Possible aminotransfera 89.4 0.91 3.1E-05 29.8 5.5 40 9-48 236-284 (406)
90 1vjo_A Alanine--glyoxylate ami 89.3 1.2 3.9E-05 29.2 5.9 54 9-62 231-307 (393)
91 1gc0_A Methionine gamma-lyase; 88.5 0.37 1.2E-05 32.3 3.1 53 10-62 224-280 (398)
92 1fg7_A Histidinol phosphate am 88.2 0.5 1.7E-05 31.0 3.6 35 9-45 225-259 (356)
93 3euc_A Histidinol-phosphate am 88.1 0.83 2.8E-05 29.7 4.6 35 9-45 237-271 (367)
94 3jtx_A Aminotransferase; NP_28 88.1 0.38 1.3E-05 31.5 2.9 36 9-44 256-291 (396)
95 3kax_A Aminotransferase, class 87.7 0.2 7E-06 32.6 1.4 37 9-45 241-279 (383)
96 1uu1_A Histidinol-phosphate am 87.7 0.81 2.8E-05 29.5 4.3 50 9-60 213-263 (335)
97 3nyt_A Aminotransferase WBPE; 87.3 0.77 2.6E-05 30.1 4.1 46 13-60 200-257 (367)
98 3nmy_A Xometc, cystathionine g 87.1 0.29 9.8E-06 33.4 1.9 53 10-62 228-282 (400)
99 3cq5_A Histidinol-phosphate am 87.0 0.92 3.1E-05 29.7 4.3 35 9-45 242-276 (369)
100 3nnk_A Ureidoglycine-glyoxylat 86.0 2.1 7.3E-05 27.9 5.7 34 29-62 266-302 (411)
101 1wyu_B Glycine dehydrogenase s 85.9 0.58 2E-05 32.2 3.0 36 27-62 318-356 (474)
102 1c7n_A Cystalysin; transferase 85.9 0.57 2E-05 30.8 2.8 37 9-45 249-287 (399)
103 3aow_A Putative uncharacterize 85.9 0.33 1.1E-05 33.2 1.7 37 9-45 299-335 (448)
104 3qhx_A Cystathionine gamma-syn 85.7 0.43 1.5E-05 32.1 2.2 51 12-62 227-280 (392)
105 3a9z_A Selenocysteine lyase; P 85.5 0.51 1.7E-05 31.4 2.5 36 27-62 281-318 (432)
106 3hdo_A Histidinol-phosphate am 85.4 1.1 3.9E-05 29.0 4.1 35 9-45 225-259 (360)
107 1elu_A L-cysteine/L-cystine C- 85.2 0.74 2.5E-05 29.9 3.1 35 28-62 271-309 (390)
108 1qz9_A Kynureninase; kynurenin 85.2 0.71 2.4E-05 30.4 3.1 33 30-62 282-317 (416)
109 3g7q_A Valine-pyruvate aminotr 85.2 0.53 1.8E-05 31.1 2.4 36 9-44 260-295 (417)
110 3d6k_A Putative aminotransfera 84.6 0.36 1.2E-05 32.4 1.4 36 9-44 268-303 (422)
111 3ez1_A Aminotransferase MOCR f 84.2 0.91 3.1E-05 30.2 3.3 37 9-45 263-299 (423)
112 1xi9_A Putative transaminase; 83.5 0.29 1E-05 32.5 0.6 49 12-61 261-315 (406)
113 3h7f_A Serine hydroxymethyltra 83.2 0.54 1.8E-05 32.1 1.8 40 9-48 257-297 (447)
114 3ftb_A Histidinol-phosphate am 83.1 0.98 3.3E-05 29.1 3.0 31 12-44 230-260 (361)
115 2yrr_A Aminotransferase, class 82.5 3.4 0.00012 26.1 5.4 54 9-62 196-267 (353)
116 3lvm_A Cysteine desulfurase; s 82.3 0.72 2.5E-05 30.5 2.2 36 27-62 259-296 (423)
117 3b1d_A Betac-S lyase; HET: PLP 82.6 0.28 9.6E-06 32.4 0.0 36 10-45 250-287 (392)
118 1b5p_A Protein (aspartate amin 81.4 1.5 5E-05 28.9 3.4 37 9-45 245-281 (385)
119 2oga_A Transaminase; PLP-depen 81.0 1.8 6.1E-05 28.7 3.7 33 27-61 254-286 (399)
120 2gb3_A Aspartate aminotransfer 80.7 0.87 3E-05 30.3 2.1 36 9-45 255-291 (409)
121 1ax4_A Tryptophanase; tryptoph 80.4 1.2 4.2E-05 29.9 2.8 50 11-60 277-333 (467)
122 3zrp_A Serine-pyruvate aminotr 80.3 5.2 0.00018 25.7 5.7 37 26-62 238-278 (384)
123 2aeu_A Hypothetical protein MJ 80.2 1.4 4.8E-05 29.3 3.0 39 9-47 217-255 (374)
124 3ly1_A Putative histidinol-pho 80.2 2.1 7.3E-05 27.4 3.8 35 9-45 224-258 (354)
125 3nra_A Aspartate aminotransfer 79.9 0.16 5.6E-06 33.4 -1.7 36 9-44 264-299 (407)
126 2z9v_A Aspartate aminotransfer 78.9 5.8 0.0002 25.7 5.6 34 29-62 246-282 (392)
127 3qgu_A LL-diaminopimelate amin 78.5 0.32 1.1E-05 32.7 -0.6 23 23-45 315-337 (449)
128 1lc5_A COBD, L-threonine-O-3-p 78.5 1.4 4.7E-05 28.7 2.5 35 9-45 227-262 (364)
129 3asa_A LL-diaminopimelate amin 78.5 0.4 1.4E-05 31.8 -0.1 37 25-61 270-307 (400)
130 3f0h_A Aminotransferase; RER07 78.4 6.2 0.00021 25.4 5.6 53 10-62 217-290 (376)
131 3if2_A Aminotransferase; YP_26 77.5 0.53 1.8E-05 31.5 0.3 37 9-45 286-322 (444)
132 3isl_A Purine catabolism prote 76.0 7.7 0.00026 25.2 5.6 33 30-62 267-302 (416)
133 1w23_A Phosphoserine aminotran 75.8 5.3 0.00018 25.6 4.7 40 9-48 205-256 (360)
134 1ajs_A Aspartate aminotransfer 75.6 2 6.8E-05 28.3 2.7 50 13-62 276-337 (412)
135 3f9t_A TDC, L-tyrosine decarbo 74.7 3.1 0.00011 26.7 3.4 37 26-62 285-321 (397)
136 3acz_A Methionine gamma-lyase; 74.5 1.3 4.4E-05 29.6 1.5 54 9-62 217-273 (389)
137 1yaa_A Aspartate aminotransfer 74.3 2.9 0.0001 27.6 3.2 31 16-46 283-313 (412)
138 3cog_A Cystathionine gamma-lya 73.7 1.9 6.5E-05 29.1 2.3 53 10-62 226-281 (403)
139 1iug_A Putative aspartate amin 73.5 8.8 0.0003 24.3 5.3 36 27-62 227-264 (352)
140 3dyd_A Tyrosine aminotransfera 73.4 2 6.8E-05 28.8 2.3 31 14-45 286-316 (427)
141 3b8x_A WBDK, pyridoxamine 5-ph 72.7 5.2 0.00018 26.2 4.2 33 27-61 249-281 (390)
142 3ecd_A Serine hydroxymethyltra 71.8 2.8 9.5E-05 27.5 2.7 53 10-62 245-302 (425)
143 1eg5_A Aminotransferase; PLP-d 71.7 6.7 0.00023 25.1 4.5 36 27-62 235-272 (384)
144 1iay_A ACC synthase 2, 1-amino 70.8 2.9 9.8E-05 27.8 2.6 35 9-45 279-314 (428)
145 2bkw_A Alanine-glyoxylate amin 69.7 14 0.00047 23.7 5.6 34 29-62 257-293 (385)
146 3gbx_A Serine hydroxymethyltra 68.4 2.7 9.1E-05 27.5 2.0 53 9-61 241-300 (420)
147 3ei9_A LL-diaminopimelate amin 68.1 1.4 4.7E-05 29.4 0.5 28 17-44 297-324 (432)
148 2huf_A Alanine glyoxylate amin 68.0 16 0.00054 23.6 5.7 32 31-62 261-295 (393)
149 3n0l_A Serine hydroxymethyltra 67.7 13 0.00045 24.2 5.3 39 9-47 236-276 (417)
150 3mad_A Sphingosine-1-phosphate 67.3 4.3 0.00015 28.0 2.9 38 25-62 352-389 (514)
151 3ppl_A Aspartate aminotransfer 65.4 2.5 8.5E-05 28.2 1.4 37 9-45 270-306 (427)
152 3get_A Histidinol-phosphate am 65.1 7 0.00024 25.1 3.5 35 9-45 238-272 (365)
153 2ch1_A 3-hydroxykynurenine tra 65.0 20 0.00069 23.1 5.7 33 29-61 258-293 (396)
154 2ay1_A Aroat, aromatic amino a 64.9 4.7 0.00016 26.3 2.7 34 13-46 261-298 (394)
155 3dr4_A Putative perosamine syn 64.6 9.1 0.00031 24.9 4.0 31 28-60 249-279 (391)
156 3fkd_A L-threonine-O-3-phospha 64.3 7.2 0.00025 25.0 3.4 36 9-46 208-243 (350)
157 3bb8_A CDP-4-keto-6-deoxy-D-gl 62.2 11 0.00037 25.3 4.1 17 30-46 290-306 (437)
158 2c0r_A PSAT, phosphoserine ami 61.4 6.5 0.00022 25.3 2.8 34 28-61 237-274 (362)
159 3p1t_A Putative histidinol-pho 60.9 13 0.00045 23.4 4.2 35 9-45 209-243 (337)
160 2ez2_A Beta-tyrosinase, tyrosi 60.1 13 0.00044 24.8 4.2 51 10-61 267-324 (456)
161 3piu_A 1-aminocyclopropane-1-c 60.0 8.2 0.00028 25.7 3.2 34 10-45 285-319 (435)
162 3ffr_A Phosphoserine aminotran 59.1 14 0.00048 23.4 4.1 34 28-61 241-277 (362)
163 1mdo_A ARNB aminotransferase; 58.1 14 0.00046 24.0 4.0 19 29-47 242-260 (393)
164 1n8p_A Cystathionine gamma-lya 58.0 6 0.00021 26.5 2.3 52 11-62 217-271 (393)
165 1bw0_A TAT, protein (tyrosine 57.7 11 0.00037 24.7 3.5 20 26-45 286-305 (416)
166 2fnu_A Aminotransferase; prote 55.5 13 0.00043 23.8 3.4 33 27-61 227-259 (375)
167 1qgn_A Protein (cystathionine 54.3 6.6 0.00023 27.2 2.0 52 9-62 273-328 (445)
168 3frk_A QDTB; aminotransferase, 53.5 20 0.00067 23.1 4.1 35 25-61 225-259 (373)
169 2q7w_A Aspartate aminotransfer 52.6 10 0.00035 24.6 2.6 19 27-45 281-300 (396)
170 3e9k_A Kynureninase; kynurenin 51.5 19 0.00066 24.2 4.0 33 30-62 333-368 (465)
171 1o69_A Aminotransferase; struc 51.4 12 0.00042 24.6 2.9 30 30-61 229-258 (394)
172 3vax_A Putative uncharacterize 50.2 26 0.0009 22.5 4.4 35 28-62 260-296 (400)
173 1ibj_A CBL, cystathionine beta 49.7 11 0.00038 26.1 2.6 53 9-61 290-345 (464)
174 4eu1_A Mitochondrial aspartate 48.6 11 0.00038 24.7 2.4 34 11-44 274-311 (409)
175 2po3_A 4-dehydrase; external a 46.6 29 0.001 22.9 4.2 28 30-59 243-270 (424)
176 3pj0_A LMO0305 protein; struct 43.5 36 0.0012 21.6 4.2 37 9-46 217-256 (359)
177 4hvk_A Probable cysteine desul 40.8 47 0.0016 20.9 4.4 35 28-62 232-268 (382)
178 3ndn_A O-succinylhomoserine su 40.4 13 0.00044 25.2 1.7 51 10-62 240-295 (414)
179 1svv_A Threonine aldolase; str 39.5 5.7 0.00019 25.2 -0.2 47 13-62 229-280 (359)
180 4eb5_A Probable cysteine desul 39.0 51 0.0017 20.9 4.4 34 29-62 233-268 (382)
181 2oqx_A Tryptophanase; lyase, p 37.8 22 0.00074 23.7 2.5 36 26-61 300-336 (467)
182 2afr_A Cobalamin biosynthesis 37.3 32 0.0011 22.6 3.2 23 24-46 195-217 (231)
183 2fyf_A PSAT, phosphoserine ami 36.8 85 0.0029 20.3 5.6 35 27-61 270-309 (398)
184 2x3l_A ORN/Lys/Arg decarboxyla 34.9 49 0.0017 22.4 4.0 36 27-62 242-280 (446)
185 3uwc_A Nucleotide-sugar aminot 34.7 30 0.001 22.1 2.7 34 26-61 227-260 (374)
186 3lws_A Aromatic amino acid bet 34.5 44 0.0015 21.2 3.5 37 9-46 215-254 (357)
187 2z67_A O-phosphoseryl-tRNA(SEC 32.9 61 0.0021 21.9 4.2 32 13-47 313-344 (456)
188 3ht4_A Aluminum resistance pro 32.2 35 0.0012 23.3 2.9 13 9-21 245-257 (431)
189 2ctz_A O-acetyl-L-homoserine s 31.2 47 0.0016 22.2 3.4 34 29-62 270-305 (421)
190 1b9h_A AHBA synthase, protein 31.1 39 0.0013 21.8 2.8 21 27-47 233-253 (388)
191 3mvn_A UDP-N-acetylmuramate:L- 28.2 56 0.0019 19.2 3.0 18 29-46 43-60 (163)
192 3rq1_A Aminotransferase class 27.1 21 0.00073 23.4 1.0 32 13-44 280-315 (418)
193 1jg8_A L-ALLO-threonine aldola 26.6 55 0.0019 20.6 2.9 37 10-46 213-251 (347)
194 3bwn_A AT1G70560, L-tryptophan 26.0 47 0.0016 21.8 2.6 37 9-45 228-265 (391)
195 2cb1_A O-acetyl homoserine sul 25.7 64 0.0022 21.3 3.2 19 29-47 262-280 (412)
196 3t18_A Aminotransferase class 24.8 20 0.0007 23.4 0.6 32 13-44 279-314 (413)
197 3mc6_A Sphingosine-1-phosphate 24.5 54 0.0019 22.1 2.7 26 36-61 328-356 (497)
198 3n75_A LDC, lysine decarboxyla 22.6 1.1E+02 0.0037 22.9 4.2 36 27-62 397-435 (715)
199 3meb_A Aspartate aminotransfer 22.1 45 0.0015 22.4 1.9 30 15-44 309-338 (448)
200 3ju7_A Putative PLP-dependent 21.5 1.3E+02 0.0046 19.6 4.2 22 26-47 230-251 (377)
No 1
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.47 E-value=4.2e-14 Score=100.35 Aligned_cols=54 Identities=26% Similarity=0.380 Sum_probs=50.9
Q ss_pred ccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 10 KNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 10 ~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
.+++++|++.+.++.|++||+|||++||||+++|++|+++++++|++++|++|.
T Consensus 306 v~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~ 359 (456)
T 4atq_A 306 ITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELAL 359 (456)
T ss_dssp EEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred eEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHH
Confidence 458999999999999999999999999999999999999999999999999864
No 2
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.41 E-value=2.1e-13 Score=97.22 Aligned_cols=54 Identities=24% Similarity=0.265 Sum_probs=48.7
Q ss_pred ccccHHHHHHhc-------ccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 10 KNERTKLMVLLS-------ILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 10 ~~g~~~i~~~~~-------~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
.+++++|++.+. ++.|++||+|||++||||+++|++++++++++|++++|++|.
T Consensus 317 v~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~ 377 (473)
T 4e3q_A 317 VILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFE 377 (473)
T ss_dssp EEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHH
T ss_pred ccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHH
Confidence 358999998773 457999999999999999999999999999999999999874
No 3
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.32 E-value=1.4e-12 Score=92.84 Aligned_cols=54 Identities=20% Similarity=0.185 Sum_probs=49.3
Q ss_pred ccccHHHHHHhcc----cCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 10 KNERTKLMVLLSI----LLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 10 ~~g~~~i~~~~~~----~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
.+|+++||+.+.+ ..|++||+|||++|||++++|+++++++++++++++|++|+
T Consensus 298 ~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~ 355 (454)
T 4ao9_A 298 FGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALR 355 (454)
T ss_dssp EEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHH
Confidence 4589999999865 36999999999999999999999999999999999999874
No 4
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=98.92 E-value=1.3e-09 Score=76.46 Aligned_cols=55 Identities=18% Similarity=0.266 Sum_probs=49.3
Q ss_pred hccccHHHHHHhccc-------CCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSIL-------LNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~-------~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+. .|++||++||++|+|++++|++++++++++++++++++++
T Consensus 302 ~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~ 363 (476)
T 3i5t_A 302 GLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFA 363 (476)
T ss_dssp EEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 456899999998753 7999999999999999999999999999999999998764
No 5
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=98.88 E-value=2.1e-09 Score=75.38 Aligned_cols=55 Identities=18% Similarity=0.287 Sum_probs=48.6
Q ss_pred hccccHHHHHHhc--ccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHH-Hhhcccc
Q 035320 9 YKNERTKLMVLLS--ILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSR-AFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~--~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~-~~G~~L~ 63 (67)
|.++++++++.+. +..|++||++||++|+|++++|+++++++++++++ +++++|+
T Consensus 303 ~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~ 360 (472)
T 3hmu_A 303 GSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLK 360 (472)
T ss_dssp EEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHH
T ss_pred EEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4568999999994 34799999999999999999999999999999999 8888763
No 6
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.88 E-value=4.3e-10 Score=84.60 Aligned_cols=55 Identities=11% Similarity=0.108 Sum_probs=48.4
Q ss_pred hccccHHHHHHhcc------cCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSI------LLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~------~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
+.+++++|++.+.+ +.|++||+|||++|||++++|++++++++.+++++++++++
T Consensus 675 av~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~ 735 (831)
T 4a0g_A 675 VTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLR 735 (831)
T ss_dssp EEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBC
T ss_pred EEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 35689999999864 35999999999999999999999999999999988888764
No 7
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=98.78 E-value=8.7e-09 Score=71.93 Aligned_cols=55 Identities=22% Similarity=0.218 Sum_probs=48.7
Q ss_pred hccccHHHHHHhc---cc--CCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLS---IL--LNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~---~~--~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+. +. .|++||++||++|++++++|++++++++.+++++++++|+
T Consensus 314 ~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~ 373 (457)
T 3tfu_A 314 ATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLT 373 (457)
T ss_dssp EEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred EEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 4568999999883 33 8999999999999999999999999999999999988764
No 8
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=98.77 E-value=7.9e-09 Score=71.75 Aligned_cols=55 Identities=33% Similarity=0.391 Sum_probs=50.1
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+..|++||++||++|++++++|+.++++++++++++++++++
T Consensus 304 ~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 358 (453)
T 4ffc_A 304 AVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVT 358 (453)
T ss_dssp EEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 4568999999998888999999999999999999999999999999999988764
No 9
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.75 E-value=8.5e-09 Score=71.45 Aligned_cols=55 Identities=29% Similarity=0.385 Sum_probs=50.1
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+..|++||++||++|++++++|+.++++++++++++++++++
T Consensus 306 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 360 (451)
T 3oks_A 306 AVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMK 360 (451)
T ss_dssp EEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4568999999998888999999999999999999999999999999999988763
No 10
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=98.73 E-value=1.7e-08 Score=69.87 Aligned_cols=55 Identities=16% Similarity=0.193 Sum_probs=48.3
Q ss_pred hccccHHHHHHhc-------ccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLS-------ILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~-------~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+. +..|++||++||++|++++++|+.++++++++++++++++++
T Consensus 301 ~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~ 362 (460)
T 3gju_A 301 GVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFR 362 (460)
T ss_dssp EEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4568999999883 458999999999999999999999999999999999887753
No 11
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.19 E-value=1.3e-09 Score=77.40 Aligned_cols=55 Identities=22% Similarity=0.161 Sum_probs=49.5
Q ss_pred hccccHHHHHHhcc-----cCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSI-----LLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~-----~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+ ..|++||++||++|+|++++|++++++++++++++++++|+
T Consensus 310 ~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~ 369 (465)
T 2yky_A 310 AFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFR 369 (465)
Confidence 45699999998876 36889999999999999999999999999999999999875
No 12
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=98.71 E-value=1.9e-08 Score=69.13 Aligned_cols=55 Identities=27% Similarity=0.417 Sum_probs=47.8
Q ss_pred hccccHHHHHHhcc------cCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSI------LLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~------~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+ ..|++||++||++|++++++|+.++++++++++++++++++
T Consensus 295 ~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 355 (452)
T 3n5m_A 295 ATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLL 355 (452)
T ss_dssp EEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45689999998832 35899999999999999999999999999999999888763
No 13
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=98.71 E-value=2e-08 Score=69.20 Aligned_cols=55 Identities=16% Similarity=0.224 Sum_probs=49.1
Q ss_pred hccccHHHHHHhcc-------cCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSI-------LLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~-------~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+ ..|++||++||++|++++++|+.++++++++++++++++++
T Consensus 291 ~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~ 352 (448)
T 3dod_A 291 VTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLH 352 (448)
T ss_dssp EEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 45689999999876 67999999999999999999999999999999999888753
No 14
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=98.67 E-value=2.5e-08 Score=68.78 Aligned_cols=55 Identities=29% Similarity=0.467 Sum_probs=49.5
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.++.|++||++||++|++++++|+.++++++.+++++++++|.
T Consensus 292 ~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 346 (433)
T 1z7d_A 292 AVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFL 346 (433)
T ss_dssp EEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4568999999888888999999999999999999999998899999999988763
No 15
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=98.66 E-value=2.7e-08 Score=68.80 Aligned_cols=55 Identities=33% Similarity=0.378 Sum_probs=49.7
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.++.|++||++||++|++++++|+.++++++.+++++++++|.
T Consensus 303 ~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 357 (439)
T 2oat_A 303 AVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILR 357 (439)
T ss_dssp EEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4568999999888888999999999999999999999998899999999988764
No 16
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=98.63 E-value=7.9e-09 Score=71.51 Aligned_cols=55 Identities=22% Similarity=0.245 Sum_probs=48.8
Q ss_pred hccccHHHHHHhc---ccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHH-Hhhcccc
Q 035320 9 YKNERTKLMVLLS---ILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSR-AFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~---~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~-~~G~~L~ 63 (67)
|.++++++++.+. +..|++||++||++|+|++++|+.+++++++++++ +++++++
T Consensus 299 ~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~ 357 (459)
T 4a6r_A 299 AVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQ 357 (459)
T ss_dssp EEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHH
T ss_pred ceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 4568999999986 66799999999999999999999999999999999 8887653
No 17
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.62 E-value=4.1e-08 Score=66.92 Aligned_cols=55 Identities=24% Similarity=0.308 Sum_probs=48.0
Q ss_pred hccccHHHHHHhcc---cCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSI---LLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~---~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+ ..|++||++||++|++++++|+.++++++++++++++++++
T Consensus 280 ~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~ 337 (434)
T 3l44_A 280 AYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLE 337 (434)
T ss_dssp EEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHH
T ss_pred eEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 44689999998865 46899999999999999999999998999999998887653
No 18
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=98.54 E-value=1e-07 Score=64.85 Aligned_cols=55 Identities=20% Similarity=0.272 Sum_probs=47.8
Q ss_pred hccccHHHHHHhcc---cCCCCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSI---LLNQSTFDGNPLATAVAIASLNVIRD-EKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~---~~h~~Tf~Gnpla~AAala~l~~i~~-~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+ ..|++||++||++|++++++|+.+++ +++.++++++++++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~ 334 (424)
T 2e7u_A 276 AYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLE 334 (424)
T ss_dssp EEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred EEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 45689999998865 35889999999999999999999988 899999999988763
No 19
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=98.52 E-value=1e-07 Score=64.95 Aligned_cols=55 Identities=24% Similarity=0.243 Sum_probs=46.2
Q ss_pred hccccHHHHHHhccc---CCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSIL---LNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~---~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+. .|++||++||++|++++++|+.++++++++++++++++++
T Consensus 278 ~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 335 (429)
T 4e77_A 278 AFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLA 335 (429)
T ss_dssp EEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 456899999988653 6999999999999999999999988999999998887753
No 20
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=98.49 E-value=1.4e-07 Score=64.33 Aligned_cols=55 Identities=24% Similarity=0.358 Sum_probs=47.6
Q ss_pred hccccHHHHHHhcc---cCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSI---LLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~---~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+ ..|++||++||++|+++.++|+.++++++.+++++++++|.
T Consensus 281 ~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~ 338 (434)
T 2epj_A 281 AVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALE 338 (434)
T ss_dssp EEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred eeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 45689999998865 25889999999999999999999988899999999888763
No 21
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=98.46 E-value=2.4e-07 Score=63.03 Aligned_cols=55 Identities=13% Similarity=0.221 Sum_probs=47.9
Q ss_pred hccccHHHHHHhcc----cCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSI----LLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~----~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+ ..|++||++||++++|++++|+.++++++.+++++.+++++
T Consensus 272 ~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~ 330 (430)
T 3i4j_A 272 GLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLL 330 (430)
T ss_dssp EEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 45689999998865 37899999999999999999999998999999988887653
No 22
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=98.45 E-value=2.9e-07 Score=61.74 Aligned_cols=54 Identities=24% Similarity=0.218 Sum_probs=48.4
Q ss_pred hccccHHH-HHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 9 YKNERTKL-MVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i-~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
|..+++++ ++.+.+..|++||++||+++++++++|+.++++++.++++++++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~ 312 (395)
T 3nx3_A 258 AFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYL 312 (395)
T ss_dssp EEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45689999 8889888899999999999999999999998889999988888765
No 23
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=98.44 E-value=2.3e-07 Score=63.07 Aligned_cols=56 Identities=21% Similarity=0.281 Sum_probs=48.3
Q ss_pred hhccccHHHHHHhcc---cCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 8 MYKNERTKLMVLLSI---LLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 8 ~~~~g~~~i~~~~~~---~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
-|.++++++++.+.+ ..|++||++||++|++++++|+.++++++.+++++++++++
T Consensus 276 G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~ 334 (427)
T 3fq8_A 276 GAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLS 334 (427)
T ss_dssp EEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHH
T ss_pred EEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 355689999998864 36999999999999999999999988999999998887753
No 24
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=98.35 E-value=6.2e-07 Score=60.89 Aligned_cols=55 Identities=20% Similarity=0.204 Sum_probs=46.7
Q ss_pred hccccHHHHHHhccc--CCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSIL--LNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~--~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|..+++++++.+.+. .|++||++||++++++.++++.++++++.+++++++++|.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~ 338 (433)
T 1zod_A 282 AIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLR 338 (433)
T ss_dssp EEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 455899999888653 4669999999999999999999988889999988887763
No 25
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=98.34 E-value=2.7e-07 Score=63.82 Aligned_cols=54 Identities=22% Similarity=0.078 Sum_probs=45.6
Q ss_pred ccccHHHHHH-----hcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 10 KNERTKLMVL-----LSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 10 ~~g~~~i~~~-----~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
..+++++++. +.+..|++||++||+++++++++|+.++++++.+++++++++|.
T Consensus 307 ~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~ 365 (449)
T 2cjg_A 307 VMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLR 365 (449)
T ss_dssp EEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3467888875 34467889999999999999999999988899999999888764
No 26
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=98.33 E-value=8.4e-07 Score=60.74 Aligned_cols=55 Identities=16% Similarity=0.183 Sum_probs=46.7
Q ss_pred hccccHHHHHHhccc---------CCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSIL---------LNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~---------~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
+.++++++++.+... .|++||++||++++++.++|+.++++++.+++++++++++
T Consensus 299 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~ 362 (449)
T 3a8u_X 299 AVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFE 362 (449)
T ss_dssp EEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 345789999888543 5789999999999999999999998899999998887763
No 27
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=98.32 E-value=3.5e-07 Score=62.58 Aligned_cols=55 Identities=22% Similarity=0.243 Sum_probs=44.9
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|..+++++++.+.++.|++||++||+++++++++|+.++++++.+++++++++|.
T Consensus 280 ~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~ 334 (420)
T 2pb2_A 280 AMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFV 334 (420)
T ss_dssp EEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHH
T ss_pred EEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4457888988887777999999999999999999999988899999999888763
No 28
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=98.30 E-value=5.9e-07 Score=61.66 Aligned_cols=54 Identities=28% Similarity=0.493 Sum_probs=41.7
Q ss_pred hccccHHHHHHhcc-----cCCCCCCCCCHHHHHHHHHHHHH-HhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSI-----LLNQSTFDGNPLATAVAIASLNV-IRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~-----~~h~~Tf~Gnpla~AAala~l~~-i~~~~l~e~~~~~G~~L~ 63 (67)
|.++++++++.+.+ ..|++||++||+++++++++|+. + ++++.+++++++++|.
T Consensus 279 ~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~ 338 (453)
T 2cy8_A 279 ILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAR 338 (453)
T ss_dssp EEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHH
T ss_pred EEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHH
Confidence 45689999998865 25889999999999999999998 8 7889999998887763
No 29
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.30 E-value=4.3e-07 Score=61.99 Aligned_cols=53 Identities=17% Similarity=0.198 Sum_probs=45.3
Q ss_pred hccccHHHHHHhcc---cCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSI---LLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~---~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
|.++++++++.+.+ ..|++||++||++|++++++|+.++ +++.+++++.+++|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l 333 (429)
T 3k28_A 278 AYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEML 333 (429)
T ss_dssp EEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHH
T ss_pred EEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 55689999998854 3589999999999999999999887 78888888887765
No 30
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=98.26 E-value=1.1e-06 Score=59.96 Aligned_cols=53 Identities=19% Similarity=0.238 Sum_probs=47.5
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
|..+++++++.+.+..|++|| +||+++++++++|+.++++++.+++++.++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~ 332 (439)
T 3dxv_A 280 AVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLL 332 (439)
T ss_dssp EEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 456899999998888899999 99999999999999998899999988888765
No 31
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=98.15 E-value=3.5e-06 Score=57.23 Aligned_cols=54 Identities=26% Similarity=0.248 Sum_probs=45.6
Q ss_pred hccccHHHHHHhccc-----CCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSIL-----LNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~-----~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
|..+++++++.+.++ .+++||++||++++++.++++.++++++.+++++++++|
T Consensus 285 ~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l 343 (429)
T 1s0a_A 285 ATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQL 343 (429)
T ss_dssp EEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 445789998887653 377899999999999999999998888999988887765
No 32
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=98.11 E-value=3e-06 Score=59.27 Aligned_cols=50 Identities=14% Similarity=0.166 Sum_probs=42.2
Q ss_pred cHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 13 RTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 13 ~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
++++ ..+.+..|++||++||++|++++++|++++++++.+++++++++|.
T Consensus 339 ~~~~-~~~~~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 388 (472)
T 1ohv_A 339 KEEF-RPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLL 388 (472)
T ss_dssp CGGG-SCSSSSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred chhh-cccccccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 5554 2344567999999999999999999999998999999999998763
No 33
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=97.98 E-value=1e-05 Score=54.05 Aligned_cols=54 Identities=20% Similarity=0.252 Sum_probs=48.0
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
|..+++++++.+.+..+++||++||++++++.++|+.++++++.++++++.+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l 315 (406)
T 4adb_A 262 ALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWF 315 (406)
T ss_dssp EEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHH
T ss_pred EEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 456899999999888899999999999999999999998888888888887765
No 34
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=97.98 E-value=9.4e-06 Score=54.63 Aligned_cols=54 Identities=22% Similarity=0.274 Sum_probs=46.6
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
|..+++++++.+.+..+.+||++||++++++.++|+.++++++.++++++.+++
T Consensus 278 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l 331 (426)
T 1sff_A 278 GVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKL 331 (426)
T ss_dssp EEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 455899999888766788999999999999999999998888888888877765
No 35
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=97.87 E-value=2.1e-05 Score=52.53 Aligned_cols=55 Identities=36% Similarity=0.461 Sum_probs=48.4
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIHY 63 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L~ 63 (67)
|..+++++++.+.+..+++||++||++++++.++|+.++++++.+++++..++|.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~ 316 (392)
T 3ruy_A 262 CAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLV 316 (392)
T ss_dssp EEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4558999999888888999999999999999999999988889998888877653
No 36
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=97.69 E-value=1.6e-05 Score=54.11 Aligned_cols=50 Identities=24% Similarity=0.323 Sum_probs=36.8
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
|..++++++ .+ .+.+.+||++||++++++.++|+.+++ +.+++++.+++|
T Consensus 292 ~~~~~~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~~~~--~~~~~~~~~~~l 341 (419)
T 2eo5_A 292 ATIFRKDLD-FK-PGMHSNTFGGNALACAIGSKVIDIVKD--LLPHVNEIGKIF 341 (419)
T ss_dssp EEEEEGGGC-CC-------CCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred EEEEchHhh-cC-CcccCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 345788877 66 557889999999999999999998765 888888888766
No 37
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=97.43 E-value=0.0002 Score=47.73 Aligned_cols=54 Identities=24% Similarity=0.301 Sum_probs=44.7
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
|..+++++.+.+.++.+.+||++||++++++.++++.++++++.++++++.++|
T Consensus 264 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l 317 (395)
T 1vef_A 264 VAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWF 317 (395)
T ss_dssp EEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred EEEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 344788888888766688999999999999999999998777888887777665
No 38
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=97.20 E-value=0.00016 Score=48.39 Aligned_cols=52 Identities=19% Similarity=0.202 Sum_probs=42.0
Q ss_pred ccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 10 KNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 10 ~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
..++++++ .+.+..++.||++||++++++.++|+.++++++.++.+++.++|
T Consensus 263 ~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l 314 (397)
T 2ord_A 263 VIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYL 314 (397)
T ss_dssp EEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHH
T ss_pred EEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 34566666 56555688999999999999999999998878888888777765
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=97.05 E-value=0.00095 Score=43.96 Aligned_cols=52 Identities=23% Similarity=0.252 Sum_probs=40.8
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
|..+++++++.+.+..+++||++||++++++.++|+.++ ++.++.+++.++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l 302 (375)
T 2eh6_A 251 AILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVE--KLLPHVREVGNYF 302 (375)
T ss_dssp EEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred EEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 344788888888766688999999999999999998876 6666666666554
No 40
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=96.27 E-value=0.0017 Score=44.07 Aligned_cols=54 Identities=13% Similarity=0.004 Sum_probs=41.8
Q ss_pred hccccHHHHHHhccc--CCCCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSIL--LNQSTFDGNPLATAVAIASLNVIRD-EKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~--~h~~Tf~Gnpla~AAala~l~~i~~-~~l~e~~~~~G~~L 62 (67)
|.++++++++.+.+. ....|++.||++++++.++|+.+++ +++.++.++++++|
T Consensus 272 ~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l 328 (427)
T 2w8t_A 272 FVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARAL 328 (427)
T ss_dssp EEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 445788888877553 2345788999999999999999876 77888888877765
No 41
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=96.15 E-value=0.0042 Score=41.93 Aligned_cols=53 Identities=8% Similarity=0.003 Sum_probs=35.8
Q ss_pred hcccc-HHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHhhcc
Q 035320 9 YKNER-TKLMVLLSILL-NQSTFDGNPLATAVAIASLNVIRD--EKLAERSRAFEGI 61 (67)
Q Consensus 9 ~~~g~-~~i~~~~~~~~-h~~Tf~Gnpla~AAala~l~~i~~--~~l~e~~~~~G~~ 61 (67)
|..++ +++++.+.+.. +.+++++||++++++.++++..++ +++.++.++..++
T Consensus 279 ~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~ 335 (421)
T 3l8a_A 279 FAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKL 335 (421)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred eEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 34466 89988887654 556779999999999999985331 3344444444443
No 42
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=95.64 E-value=0.0089 Score=40.17 Aligned_cols=37 Identities=5% Similarity=0.110 Sum_probs=31.7
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++++.+....+..||+.|+++++++.++|+.
T Consensus 266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 302 (429)
T 1yiz_A 266 WAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFET 302 (429)
T ss_dssp EEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhc
Confidence 4557899998887767778999999999999999987
No 43
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=95.59 E-value=0.011 Score=39.16 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=40.6
Q ss_pred hccccHHHHHHhcccC--CCCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILL--NQSTFDGNPLATAVAIASLNVIRD-EKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~--h~~Tf~Gnpla~AAala~l~~i~~-~~l~e~~~~~G~~L 62 (67)
|..+++++++.+.... +..|++.||++++++.++|+.+++ +++.++.++..++|
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 312 (401)
T 1fc4_A 256 YTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQF 312 (401)
T ss_dssp EEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred EEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4557899988775432 445789999999999999998864 56777777776654
No 44
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=95.57 E-value=0.017 Score=38.11 Aligned_cols=54 Identities=7% Similarity=-0.081 Sum_probs=38.0
Q ss_pred hccccHHHHHHhcccCCCCCCCC-CHHHHHHHHHHHHHHhh---hhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDG-NPLATAVAIASLNVIRD---EKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~G-npla~AAala~l~~i~~---~~l~e~~~~~G~~L 62 (67)
|..+++++.+.+.+.....++++ ||..+++..++++.+.+ +++.++.+++.++|
T Consensus 235 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l 292 (405)
T 2vi8_A 235 MILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRL 292 (405)
T ss_dssp EEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred EEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 44578888887765433445555 78889988899988765 56677777666654
No 45
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=95.25 E-value=0.015 Score=38.39 Aligned_cols=40 Identities=8% Similarity=-0.032 Sum_probs=32.7
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRD 48 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~ 48 (67)
|..+++++++.+.+..+..+++.|+++++++.++|+..++
T Consensus 244 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 283 (389)
T 1gd9_A 244 FVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERS 283 (389)
T ss_dssp EEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHH
T ss_pred EEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCc
Confidence 4558899998887767778899999999999999876544
No 46
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=94.85 E-value=0.031 Score=37.74 Aligned_cols=40 Identities=10% Similarity=0.115 Sum_probs=32.4
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRD 48 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~ 48 (67)
|..+++++++.+....+..+++.|+++.+++.+.|+.+.+
T Consensus 273 ~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~ 312 (425)
T 2r2n_A 273 FLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGE 312 (425)
T ss_dssp EEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHH
T ss_pred EEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhccc
Confidence 4568899988887666677899999999999999987543
No 47
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=94.82 E-value=0.052 Score=35.57 Aligned_cols=38 Identities=11% Similarity=0.056 Sum_probs=32.5
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i 46 (67)
|.++++++++.+....+..++++++++++++.++++..
T Consensus 233 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 270 (375)
T 3op7_A 233 WVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHY 270 (375)
T ss_dssp EEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTH
T ss_pred EEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhcc
Confidence 44579999999988788889999999999999988754
No 48
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=94.73 E-value=0.027 Score=37.11 Aligned_cols=54 Identities=19% Similarity=0.025 Sum_probs=39.4
Q ss_pred hccccHHHHHHhccc--CCCCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSIL--LNQSTFDGNPLATAVAIASLNVIRD---EKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~--~h~~Tf~Gnpla~AAala~l~~i~~---~~l~e~~~~~G~~L 62 (67)
|..+++++++.+... .+..|++.||++++++.++++.+++ +++.++.++..++|
T Consensus 244 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l 302 (384)
T 1bs0_A 244 AVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRF 302 (384)
T ss_dssp EEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 445788888877542 3345568999999999999998873 46777777766654
No 49
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=94.47 E-value=0.021 Score=37.64 Aligned_cols=37 Identities=19% Similarity=0.099 Sum_probs=30.4
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++++.+.+..+.+|++.++++++++.+.|+.
T Consensus 248 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 284 (388)
T 1j32_A 248 FLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN 284 (388)
T ss_dssp EEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS
T ss_pred EEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC
Confidence 4458899988887666778999999999999988863
No 50
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=94.44 E-value=0.11 Score=33.44 Aligned_cols=54 Identities=9% Similarity=-0.006 Sum_probs=38.6
Q ss_pred hccccH-HHHHHhcccCCC-CCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 9 YKNERT-KLMVLLSILLNQ-STFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~-~i~~~~~~~~h~-~Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
|..+++ ++.+.+.+..++ .++..||++++++.+.++.+. .+.+.+++..+.+++
T Consensus 157 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 214 (331)
T 1pff_A 157 LVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFL 214 (331)
T ss_dssp EEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHH
Confidence 445787 898888777666 678899999998888887662 345566666655543
No 51
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=94.35 E-value=0.015 Score=38.98 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=30.8
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i 46 (67)
|..+++++++.+....+..+++.|+++++++.++|+..
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 293 (412)
T 2x5d_A 256 FMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGD 293 (412)
T ss_dssp EEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC
T ss_pred EEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC
Confidence 44578999888876666678999999999999988753
No 52
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=94.31 E-value=0.015 Score=38.39 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=37.7
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh--h--hhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIR--D--EKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~--~--~~l~e~~~~~G~~L 62 (67)
|..+++++++.+....+..+|+.++++++++.++|+... + +++.++.++..++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 290 (381)
T 1v2d_A 233 WIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLL 290 (381)
T ss_dssp EEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHH
Confidence 445688888877655556788999999999999998763 2 34555555555543
No 53
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=93.98 E-value=0.081 Score=34.89 Aligned_cols=54 Identities=6% Similarity=-0.192 Sum_probs=38.2
Q ss_pred hcccc-HHHHHHhccc-CCCCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHhhccc
Q 035320 9 YKNER-TKLMVLLSIL-LNQSTFDGNPLATAVAIASLNVIRD---EKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~-~~i~~~~~~~-~h~~Tf~Gnpla~AAala~l~~i~~---~~l~e~~~~~G~~L 62 (67)
|..++ +++++.+.+. .++.+.+.++..++++.++++.+.+ +++.++.+++.++|
T Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 293 (407)
T 2dkj_A 235 LILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRL 293 (407)
T ss_dssp EEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44477 7888877653 4566777899989888888888754 55666666666554
No 54
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=93.87 E-value=0.034 Score=36.33 Aligned_cols=49 Identities=10% Similarity=-0.098 Sum_probs=35.2
Q ss_pred ccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHhhc
Q 035320 12 ERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRD--EKLAERSRAFEG 60 (67)
Q Consensus 12 g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~--~~l~e~~~~~G~ 60 (67)
+++++++.+....+..+++.||++++++.+.++..++ +++.++.++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 288 (377)
T 3fdb_A 238 SNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHD 288 (377)
T ss_dssp CSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 4788888887777778899999999999999875322 334444444443
No 55
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=93.85 E-value=0.042 Score=37.46 Aligned_cols=42 Identities=10% Similarity=0.035 Sum_probs=33.1
Q ss_pred hccc-cHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhh
Q 035320 9 YKNE-RTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEK 50 (67)
Q Consensus 9 ~~~g-~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~ 50 (67)
|..+ ++++++.+....+..+|+.++++++++.++|+....++
T Consensus 285 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~ 327 (447)
T 3b46_A 285 WVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIG 327 (447)
T ss_dssp EEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchH
Confidence 4446 89998888766667889999999999999998764344
No 56
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=93.55 E-value=0.0092 Score=39.95 Aligned_cols=54 Identities=7% Similarity=-0.051 Sum_probs=36.5
Q ss_pred hccccHHHHHHhcccCC--CCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLN--QSTFDGNPLATAVAIASLNVIRD-EKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h--~~Tf~Gnpla~AAala~l~~i~~-~~l~e~~~~~G~~L 62 (67)
|.++++++++.+....+ ..+...+|+++++++++++.+++ +++.++.+++.++|
T Consensus 264 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l 320 (409)
T 3kki_A 264 AIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKL 320 (409)
T ss_dssp EEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 34467777666543221 12233789999999999999875 46777777776655
No 57
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=93.22 E-value=0.21 Score=32.51 Aligned_cols=54 Identities=7% Similarity=-0.047 Sum_probs=38.0
Q ss_pred hccccHHHHHHhccc------------------CCCCCCCCCHHHHHHHHHHHHHHhhh----hHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSIL------------------LNQSTFDGNPLATAVAIASLNVIRDE----KLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~------------------~h~~Tf~Gnpla~AAala~l~~i~~~----~l~e~~~~~G~~L 62 (67)
|..+++++++.+.+. ....+++.|+++++++.++|+.+.++ ++.++.+++.+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l 293 (386)
T 2dr1_A 218 IGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMV 293 (386)
T ss_dssp EEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 445788887766321 13557788999999999999988654 5666666666554
No 58
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=93.16 E-value=0.022 Score=37.41 Aligned_cols=37 Identities=8% Similarity=0.141 Sum_probs=30.6
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+....+..+++.|+++++++.++|+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 269 (370)
T 2z61_A 233 YVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEK 269 (370)
T ss_dssp EEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSH
T ss_pred EEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhc
Confidence 4558899988887666677889999999999998875
No 59
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=93.11 E-value=0.068 Score=35.35 Aligned_cols=37 Identities=11% Similarity=0.106 Sum_probs=31.6
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++++.+....+.++|+.|+++++++.+.|+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (410)
T 3e2y_A 251 WSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWI 287 (410)
T ss_dssp EEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Confidence 4568999998887777788999999999999999874
No 60
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=92.90 E-value=0.19 Score=32.78 Aligned_cols=54 Identities=9% Similarity=0.048 Sum_probs=34.4
Q ss_pred hccccHHHHHHhcccCCCC---------------------CCCCCHHHHHHHH-HHHHHHhhh---hHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLNQS---------------------TFDGNPLATAVAI-ASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~---------------------Tf~Gnpla~AAal-a~l~~i~~~---~l~e~~~~~G~~L 62 (67)
|..+++++++.+.+..+++ +.+.+++.+++++ ++++.+++. ++.++.+++.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 313 (406)
T 1kmj_A 235 ILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYA 313 (406)
T ss_dssp EEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 4457899988876544322 2445677777666 788887653 5666666655554
No 61
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=92.83 E-value=0.2 Score=33.29 Aligned_cols=35 Identities=3% Similarity=-0.169 Sum_probs=26.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhccc
Q 035320 28 TFDGNPLATAVAIASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 28 Tf~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~L 62 (67)
++..|+.++++..++|++++++ ++.++.+++.++|
T Consensus 250 ~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l 287 (379)
T 3ke3_A 250 HATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRV 287 (379)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Confidence 3477889999999999998765 6666666666654
No 62
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=92.70 E-value=0.094 Score=34.27 Aligned_cols=37 Identities=5% Similarity=0.001 Sum_probs=31.5
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++++.+....+..+|+.|+++++++.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 278 (376)
T 3ezs_A 242 FIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLD 278 (376)
T ss_dssp EEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC
T ss_pred EEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC
Confidence 4558999999887777788999999999999998874
No 63
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=92.67 E-value=0.094 Score=34.87 Aligned_cols=37 Identities=16% Similarity=0.160 Sum_probs=31.5
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++++.+....+.++|+.|+++++++.++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 294 (422)
T 3fvs_A 258 WVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFER 294 (422)
T ss_dssp EEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhh
Confidence 4568899988887777788999999999999999875
No 64
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=92.59 E-value=0.04 Score=36.80 Aligned_cols=38 Identities=8% Similarity=0.073 Sum_probs=29.8
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i 46 (67)
|..+++++++.+....+..+|+.++++++++.++|+..
T Consensus 244 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 281 (411)
T 2o0r_A 244 WACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTE 281 (411)
T ss_dssp EEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC
T ss_pred EEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC
Confidence 44578999888876656678889999999999988753
No 65
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=92.57 E-value=0.085 Score=34.60 Aligned_cols=54 Identities=11% Similarity=0.144 Sum_probs=38.8
Q ss_pred hccccHHHHHHhcccC--CCCCCCCCHHHHHHHHHHHHHH-h-hhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILL--NQSTFDGNPLATAVAIASLNVI-R-DEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~--h~~Tf~Gnpla~AAala~l~~i-~-~~~l~e~~~~~G~~L 62 (67)
|..+++++++.+.... ...+...||++++++.++++.+ + .+++.++.+++.++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 311 (399)
T 3tqx_A 254 YTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYF 311 (399)
T ss_dssp EEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 4558899988875432 2235578999999999999988 3 366777777666654
No 66
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=92.54 E-value=0.13 Score=33.94 Aligned_cols=54 Identities=11% Similarity=0.115 Sum_probs=38.7
Q ss_pred hccccHHHHHHhccc--CCCCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSIL--LNQSTFDGNPLATAVAIASLNVIRD-EKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~--~h~~Tf~Gnpla~AAala~l~~i~~-~~l~e~~~~~G~~L 62 (67)
|..+++++++.+... .+..+...+|+.++++.++|+.++. +++.++.++..+++
T Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l 307 (398)
T 3a2b_A 251 FVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYA 307 (398)
T ss_dssp EEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 455889998887653 3567788999999998899887643 35666666665544
No 67
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=92.47 E-value=0.36 Score=31.33 Aligned_cols=55 Identities=13% Similarity=-0.075 Sum_probs=36.9
Q ss_pred hhccccHHHHHHhcccC-----------------------CCCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHhhcc
Q 035320 8 MYKNERTKLMVLLSILL-----------------------NQSTFDGNPLATAVAIASLNVIRD---EKLAERSRAFEGI 61 (67)
Q Consensus 8 ~~~~g~~~i~~~~~~~~-----------------------h~~Tf~Gnpla~AAala~l~~i~~---~~l~e~~~~~G~~ 61 (67)
-+..+++++++.+.+.. ...++..|+.++++..++++.+.+ +++.++..++.++
T Consensus 219 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 298 (393)
T 3kgw_A 219 SLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAH 298 (393)
T ss_dssp EEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred eEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 35567888888774321 122456689999999999998766 5556666666655
Q ss_pred c
Q 035320 62 H 62 (67)
Q Consensus 62 L 62 (67)
|
T Consensus 299 l 299 (393)
T 3kgw_A 299 L 299 (393)
T ss_dssp H
T ss_pred H
Confidence 4
No 68
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=92.32 E-value=0.067 Score=35.26 Aligned_cols=38 Identities=16% Similarity=0.051 Sum_probs=30.5
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i 46 (67)
|..+++++++.+....+..+|+.++++++++.++|+..
T Consensus 247 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 284 (386)
T 1u08_A 247 YCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE 284 (386)
T ss_dssp EEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC
T ss_pred EEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC
Confidence 45578998888876666678999999999999988754
No 69
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=92.24 E-value=0.077 Score=35.48 Aligned_cols=53 Identities=15% Similarity=-0.159 Sum_probs=37.9
Q ss_pred hccccHHHHH-H-----------------hcccCCCCCCCCCHHHHHHHHHHHHHHh-----hhhHHHHHHHhhcc
Q 035320 9 YKNERTKLMV-L-----------------LSILLNQSTFDGNPLATAVAIASLNVIR-----DEKLAERSRAFEGI 61 (67)
Q Consensus 9 ~~~g~~~i~~-~-----------------~~~~~h~~Tf~Gnpla~AAala~l~~i~-----~~~l~e~~~~~G~~ 61 (67)
|..+++++++ . +....+..+++.|+++++++.+.|+... -+++.++.++..++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 346 (437)
T 3g0t_A 271 VLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARI 346 (437)
T ss_dssp EEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred EEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHH
Confidence 4457788887 6 6555566789999999999999998765 34555555555444
No 70
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=92.03 E-value=0.033 Score=37.03 Aligned_cols=51 Identities=18% Similarity=0.159 Sum_probs=34.7
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEG 60 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~ 60 (67)
|..+++++++.+.+..+..|++.++++++++.++|+.. -+++.++.++..+
T Consensus 257 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~ 307 (389)
T 1o4s_A 257 YLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD-NSYMVQTFKERKN 307 (389)
T ss_dssp EEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHH
Confidence 44578999888876666678999999999988887532 2334444444333
No 71
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=91.74 E-value=0.054 Score=35.59 Aligned_cols=37 Identities=8% Similarity=0.109 Sum_probs=29.8
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++++.+....+..+++.|+++++++.++|+.
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 277 (376)
T 2dou_A 241 FALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKT 277 (376)
T ss_dssp EEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTS
T ss_pred EEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhC
Confidence 4457899988887666667888999999999988864
No 72
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=91.56 E-value=0.062 Score=35.72 Aligned_cols=54 Identities=11% Similarity=0.102 Sum_probs=36.6
Q ss_pred hccccH-HHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 9 YKNERT-KLMVLLSILLNQSTFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~-~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
|..+++ ++++.+.+..++.++.+||++++++++.++.+. .+.+.++.+.+.++|
T Consensus 210 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l 266 (386)
T 1cs1_A 210 VVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYL 266 (386)
T ss_dssp EEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 344665 888888765555667899999999888887653 345566666655443
No 73
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=91.46 E-value=0.21 Score=32.97 Aligned_cols=38 Identities=8% Similarity=0.079 Sum_probs=31.1
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i 46 (67)
|..+++++++.+....+..++++|+++++++.+.++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 294 (407)
T 2zc0_A 257 WIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRG 294 (407)
T ss_dssp EEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTT
T ss_pred EEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcC
Confidence 45578999888877667788999999999999998754
No 74
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=90.83 E-value=0.46 Score=31.17 Aligned_cols=55 Identities=9% Similarity=0.184 Sum_probs=35.2
Q ss_pred hhccccHHHHHHhcccCCC--------------------CCCCCCHHHHHHHHH-HHHHHhh---hhHHHHHHHhhccc
Q 035320 8 MYKNERTKLMVLLSILLNQ--------------------STFDGNPLATAVAIA-SLNVIRD---EKLAERSRAFEGIH 62 (67)
Q Consensus 8 ~~~~g~~~i~~~~~~~~h~--------------------~Tf~Gnpla~AAala-~l~~i~~---~~l~e~~~~~G~~L 62 (67)
-|..+++++++.+.+...+ .+++.+++.++++++ +++.+++ +++.++.+++.+++
T Consensus 239 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 317 (420)
T 1t3i_A 239 GFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYL 317 (420)
T ss_dssp EEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4556889998887654322 234677777777766 7887765 45666666555543
No 75
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=90.71 E-value=0.2 Score=33.47 Aligned_cols=54 Identities=7% Similarity=0.017 Sum_probs=36.1
Q ss_pred hccccHHHHH-HhcccCCCC-CCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHhhccc
Q 035320 9 YKNERTKLMV-LLSILLNQS-TFDGNPLATAVAIASLNVIRD--EKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~-~~~~~~h~~-Tf~Gnpla~AAala~l~~i~~--~~l~e~~~~~G~~L 62 (67)
|..+++++++ .+.+..+.. +++.||++++++.++++.+.+ +++.+++..+.++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l 279 (398)
T 2rfv_A 222 IIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFL 279 (398)
T ss_dssp EEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 4457888876 565544444 678999999999999976532 34555555555544
No 76
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=90.71 E-value=0.17 Score=33.03 Aligned_cols=36 Identities=19% Similarity=-0.056 Sum_probs=27.4
Q ss_pred cccc-HHHHHHhccc-CCCCCCCCCHHHHHHHHHHHHH
Q 035320 10 KNER-TKLMVLLSIL-LNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 10 ~~g~-~~i~~~~~~~-~h~~Tf~Gnpla~AAala~l~~ 45 (67)
..++ +++.+.+... .+.++++.|+++++++.++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (391)
T 4dq6_A 250 VVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNN 287 (391)
T ss_dssp EECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc
Confidence 3355 4888877654 4556889999999999999875
No 77
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=90.58 E-value=0.075 Score=35.09 Aligned_cols=36 Identities=8% Similarity=0.078 Sum_probs=29.5
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~ 44 (67)
|..+++++.+.+....+..+++.|+++++++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 276 (391)
T 3h14_A 241 WMVVPEDQVRVVERIAQNMFICAPHASQVAALAALD 276 (391)
T ss_dssp EEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTT
T ss_pred EEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhC
Confidence 455788888888766677899999999999988876
No 78
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=90.57 E-value=0.14 Score=34.29 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=30.3
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+....+..+++.|+++++++.++|+.
T Consensus 264 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 300 (404)
T 2o1b_A 264 FAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNH 300 (404)
T ss_dssp EEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred eEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence 4457899988887666667889999999999998876
No 79
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=90.47 E-value=0.096 Score=34.02 Aligned_cols=52 Identities=8% Similarity=0.027 Sum_probs=34.1
Q ss_pred hccccHHHHHH-hcccCC--CC-----CCCCCHHHHHHHHHHHHHHhhhhHHHHH--HHhhcc
Q 035320 9 YKNERTKLMVL-LSILLN--QS-----TFDGNPLATAVAIASLNVIRDEKLAERS--RAFEGI 61 (67)
Q Consensus 9 ~~~g~~~i~~~-~~~~~h--~~-----Tf~Gnpla~AAala~l~~i~~~~l~e~~--~~~G~~ 61 (67)
|..+++++++. +.+..+ .. ++..|+.+++++.++++.+.+ ++.++. +++.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~ 280 (371)
T 2e7j_A 219 VMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE-RIKRWDEEVEKARR 280 (371)
T ss_dssp EEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGGHHHHHHHHHH
T ss_pred EEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 34467777776 654433 22 677899999999999988765 555555 444443
No 80
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=90.46 E-value=0.092 Score=35.32 Aligned_cols=38 Identities=5% Similarity=0.014 Sum_probs=30.3
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i 46 (67)
|..+++++++.+....+..+++.|+++++++.++|+..
T Consensus 270 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 307 (425)
T 1vp4_A 270 MVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERY 307 (425)
T ss_dssp EEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHS
T ss_pred EEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcC
Confidence 45578999888876556667888999999999998763
No 81
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=90.45 E-value=0.58 Score=29.97 Aligned_cols=54 Identities=9% Similarity=0.017 Sum_probs=36.1
Q ss_pred hccccHHHHHHhcccC------------------CCCCCCCCHHHHHHHHHHHHHHhhh----hHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILL------------------NQSTFDGNPLATAVAIASLNVIRDE----KLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~------------------h~~Tf~Gnpla~AAala~l~~i~~~----~l~e~~~~~G~~L 62 (67)
|..+++++++.+.+.. ....|..|+.+++++.++++.+.+. ++.++.+++.++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l 278 (366)
T 1m32_A 203 FVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSL 278 (366)
T ss_dssp EEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHH
Confidence 4457888877664321 1113788999999999999988654 4666666666554
No 82
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=90.16 E-value=0.29 Score=32.31 Aligned_cols=54 Identities=15% Similarity=0.120 Sum_probs=35.7
Q ss_pred hccccHHHHHHhccc--CCCCCCCCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSIL--LNQSTFDGNPLATAVAIASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~--~h~~Tf~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~L 62 (67)
|..+++++.+.+... ....+.+.+|++++++.++++.+++. ++.++.+++.+++
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 314 (401)
T 2bwn_A 256 YIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVL 314 (401)
T ss_dssp EEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred EEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 345678887766421 11122345789999999999998764 6777777766654
No 83
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=89.83 E-value=0.15 Score=33.35 Aligned_cols=37 Identities=19% Similarity=-0.008 Sum_probs=28.3
Q ss_pred hcccc-HHHHHHhccc-CCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNER-TKLMVLLSIL-LNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~-~~i~~~~~~~-~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..++ +++++.+... .+.++++.||++++++.++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 283 (391)
T 3dzz_A 245 CAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEE 283 (391)
T ss_dssp EEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence 33465 8888887654 3456789999999999999876
No 84
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=89.82 E-value=0.53 Score=30.53 Aligned_cols=34 Identities=18% Similarity=0.397 Sum_probs=27.2
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~ 44 (67)
|..+++++.+.+.+.. .+|+.|+++++++.+.|+
T Consensus 236 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~ 269 (363)
T 3ffh_A 236 YGIADKEIIRQLNIVR--PPFNTTSIGQKLAIEAIK 269 (363)
T ss_dssp EEEECHHHHHHHHHTC--CSCCCBHHHHHHHHHHHH
T ss_pred eeecCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhc
Confidence 3447899988876543 378999999999999986
No 85
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=89.80 E-value=0.31 Score=32.10 Aligned_cols=37 Identities=16% Similarity=0.070 Sum_probs=27.5
Q ss_pred hccc-cHHHHHHhcccCC-CCCC-CCCHHHHHHHHHHHHH
Q 035320 9 YKNE-RTKLMVLLSILLN-QSTF-DGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g-~~~i~~~~~~~~h-~~Tf-~Gnpla~AAala~l~~ 45 (67)
|..+ ++++.+.+....+ ..+| +.|+++++++.++++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 283 (390)
T 1d2f_A 244 YGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQ 283 (390)
T ss_dssp EEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhc
Confidence 3345 4788887765555 6777 7899999999998874
No 86
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=89.75 E-value=0.34 Score=32.45 Aligned_cols=36 Identities=8% Similarity=0.028 Sum_probs=28.3
Q ss_pred hccc---cHHHHHHhcccC----CCCCCCCCHHHHHHHHHHHH
Q 035320 9 YKNE---RTKLMVLLSILL----NQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 9 ~~~g---~~~i~~~~~~~~----h~~Tf~Gnpla~AAala~l~ 44 (67)
|..+ ++++.+.+.... ++.+++.|+++++++.+.|+
T Consensus 282 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (430)
T 2x5f_A 282 FMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK 324 (430)
T ss_dssp EEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred EEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence 4456 889888775433 33789999999999999998
No 87
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=89.65 E-value=0.59 Score=31.54 Aligned_cols=54 Identities=7% Similarity=0.008 Sum_probs=35.4
Q ss_pred hccccHHHHH-HhcccCCCC-CCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMV-LLSILLNQS-TFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~-~~~~~~h~~-Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
|..+++++.+ .+.+..... +.+.||++++++.+.++.+. .+++.+++..+.+++
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l 278 (404)
T 1e5e_A 221 LICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTLNIRMKAESENAMKVAEYL 278 (404)
T ss_dssp EEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH
Confidence 4458888887 776654444 56789999999998887652 233455555544443
No 88
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=89.43 E-value=0.099 Score=34.64 Aligned_cols=37 Identities=8% Similarity=0.025 Sum_probs=29.1
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+....+..+++.|+++++++.+.|+.
T Consensus 248 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 284 (397)
T 2zyj_A 248 FAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKE 284 (397)
T ss_dssp EEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTT
T ss_pred EEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh
Confidence 4457899988887655667788899999999888753
No 89
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=89.37 E-value=0.91 Score=29.80 Aligned_cols=40 Identities=10% Similarity=-0.100 Sum_probs=27.5
Q ss_pred hccccHHHHHHhcccCC--C-------CCCCCCHHHHHHHHHHHHHHhh
Q 035320 9 YKNERTKLMVLLSILLN--Q-------STFDGNPLATAVAIASLNVIRD 48 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h--~-------~Tf~Gnpla~AAala~l~~i~~ 48 (67)
|..+++++.+.+.+..+ + .....|+.+++++.++++.+.+
T Consensus 236 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~ 284 (406)
T 3cai_A 236 MVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAA 284 (406)
T ss_dssp EEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHT
T ss_pred EEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHH
Confidence 44578898887765432 1 1344688988888888888765
No 90
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=89.32 E-value=1.2 Score=29.17 Aligned_cols=54 Identities=7% Similarity=-0.113 Sum_probs=35.6
Q ss_pred hccccHHHHHHhcc-------cCC------------CCCC-CCCHHHHHHHHHHHHHHhh---hhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSI-------LLN------------QSTF-DGNPLATAVAIASLNVIRD---EKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~-------~~h------------~~Tf-~Gnpla~AAala~l~~i~~---~~l~e~~~~~G~~L 62 (67)
|..+++++++.+.. ..+ ..++ +.|+++++++.++|+.+.+ +++.++.+++.+++
T Consensus 231 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 307 (393)
T 1vjo_A 231 PFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYL 307 (393)
T ss_dssp EEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 44578888877621 111 2345 6799999999999998754 35666666665554
No 91
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=88.51 E-value=0.37 Score=32.27 Aligned_cols=53 Identities=8% Similarity=0.061 Sum_probs=35.4
Q ss_pred ccccHHHHH-HhcccCCC-CCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 10 KNERTKLMV-LLSILLNQ-STFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 10 ~~g~~~i~~-~~~~~~h~-~Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
..+++++++ .+.+..++ .+...||++++++++.++.+. .+++.++++.+.++|
T Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L 280 (398)
T 1gc0_A 224 VVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFL 280 (398)
T ss_dssp EEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 447877665 45554444 556789999999999887653 345666666666554
No 92
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=88.17 E-value=0.5 Score=30.99 Aligned_cols=35 Identities=11% Similarity=0.184 Sum_probs=26.8
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+... ..+|+.|+++++++.++|+.
T Consensus 225 ~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~ 259 (356)
T 1fg7_A 225 FTLANEEVINLLMKV--IAPYPLSTPVADIAAQALSP 259 (356)
T ss_dssp EEEECHHHHHHHHHH--SCSSCSCHHHHHHHHHHTSH
T ss_pred EEEeCHHHHHHHHHh--cCCCCCCHHHHHHHHHHhcC
Confidence 455789988877543 34678999999999998864
No 93
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=88.13 E-value=0.83 Score=29.66 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=27.4
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++++.+.... .+|+.|+++++++.+.|+.
T Consensus 237 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~ 271 (367)
T 3euc_A 237 YVAGDPQWLEQLDKVR--PPYNVNVLTEATALFALEH 271 (367)
T ss_dssp EEEECHHHHHHHGGGC--CSSCCCHHHHHHHHHHHTT
T ss_pred eeeeCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhcC
Confidence 3457888888876543 4688999999999999875
No 94
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=88.07 E-value=0.38 Score=31.54 Aligned_cols=36 Identities=8% Similarity=0.030 Sum_probs=30.2
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~ 44 (67)
|..+++++.+.+....+..+++.|+++++++.+.++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 291 (396)
T 3jtx_A 256 FVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWD 291 (396)
T ss_dssp EEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhC
Confidence 446889999888776677889999999999999885
No 95
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=87.73 E-value=0.2 Score=32.58 Aligned_cols=37 Identities=14% Similarity=-0.024 Sum_probs=27.4
Q ss_pred hccc-cHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNE-RTKLMVLLSILL-NQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g-~~~i~~~~~~~~-h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+ ++++.+.+.... +.++++.|+++++++.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 279 (383)
T 3kax_A 241 IIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE 279 (383)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT
T ss_pred EEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh
Confidence 3445 688888776543 445678999999999998865
No 96
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=87.71 E-value=0.81 Score=29.51 Aligned_cols=50 Identities=12% Similarity=0.038 Sum_probs=32.6
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHhhc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIR-DEKLAERSRAFEG 60 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~-~~~l~e~~~~~G~ 60 (67)
|..+++++.+.+.+. ..+|+.|+++++++.++|+..+ -+++.++.++..+
T Consensus 213 ~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 263 (335)
T 1uu1_A 213 YVVASEKFIDAYNRV--RLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERE 263 (335)
T ss_dssp EEEECHHHHHHHHHH--SCTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHh--cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 445788988877543 2457999999999999987532 2234444444433
No 97
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=87.27 E-value=0.77 Score=30.08 Aligned_cols=46 Identities=9% Similarity=0.101 Sum_probs=30.1
Q ss_pred cHHHHHHhccc------------CCCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhc
Q 035320 13 RTKLMVLLSIL------------LNQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEG 60 (67)
Q Consensus 13 ~~~i~~~~~~~------------~h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~ 60 (67)
++++++.+.+. ..+.++..+|+.++++++.++.++ ++.++.+++.+
T Consensus 200 ~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~--~~~~~~~~~~~ 257 (367)
T 3nyt_A 200 DDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFE--EEIALRQKVAA 257 (367)
T ss_dssp CHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 57777665331 225689999999999999987663 33444444433
No 98
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=87.09 E-value=0.29 Score=33.42 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=39.3
Q ss_pred ccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 10 KNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 10 ~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
..+++++.+.+....+..++..+|+.+++++..++.+. -++..+++..+.++|
T Consensus 228 v~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L 282 (400)
T 3nmy_A 228 VGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWL 282 (400)
T ss_dssp ECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH
Confidence 34578888877666566677889999999998888764 356677777776655
No 99
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=87.02 E-value=0.92 Score=29.65 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=26.9
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+... ..+|+.|+++++++.+.|+.
T Consensus 242 ~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~ 276 (369)
T 3cq5_A 242 YFVANPAFIDAVMLV--RLPYHLSALSQAAAIVALRH 276 (369)
T ss_dssp EEEECTHHHHHHHTT--SCTTCSCHHHHHHHHHHHHT
T ss_pred EEEeCHHHHHHHHHc--CCCCCCCHHHHHHHHHHhcC
Confidence 445788888877643 34678999999999999875
No 100
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=86.02 E-value=2.1 Score=27.92 Aligned_cols=34 Identities=15% Similarity=-0.040 Sum_probs=24.0
Q ss_pred CCCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhccc
Q 035320 29 FDGNPLATAVAIASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 29 f~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~L 62 (67)
+..|+.++++..++++.+.++ ++.++..++.++|
T Consensus 266 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l 302 (411)
T 3nnk_A 266 HTEATTALFGARECARLILQEGLDYGIARHKLHGDAL 302 (411)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 345888888888999887664 5666666665544
No 101
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=85.88 E-value=0.58 Score=32.24 Aligned_cols=36 Identities=28% Similarity=0.143 Sum_probs=24.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhH---HHHHHHhhccc
Q 035320 27 STFDGNPLATAVAIASLNVIRDEKL---AERSRAFEGIH 62 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~~~~l---~e~~~~~G~~L 62 (67)
.++.+|+++++++.+.++.+..+.+ .++..+..++|
T Consensus 318 ~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l 356 (474)
T 1wyu_B 318 RSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYL 356 (474)
T ss_dssp SSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566899999999999987655554 44455554443
No 102
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=85.87 E-value=0.57 Score=30.79 Aligned_cols=37 Identities=3% Similarity=-0.166 Sum_probs=26.4
Q ss_pred hcccc-HHHHHHhcccCCCCCC-CCCHHHHHHHHHHHHH
Q 035320 9 YKNER-TKLMVLLSILLNQSTF-DGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~-~~i~~~~~~~~h~~Tf-~Gnpla~AAala~l~~ 45 (67)
|..++ +++++.+....+..++ +.||++++++.++|+.
T Consensus 249 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (399)
T 1c7n_A 249 NIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKE 287 (399)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence 34455 6788877655444555 6799999999998864
No 103
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=85.86 E-value=0.33 Score=33.23 Aligned_cols=37 Identities=11% Similarity=0.094 Sum_probs=29.6
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|.++++++++.+....+..+++.|+++.+++.+.|+.
T Consensus 299 ~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~ 335 (448)
T 3aow_A 299 WMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDG 335 (448)
T ss_dssp EEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHT
T ss_pred EEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 4568899998886655667788899999999888864
No 104
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=85.72 E-value=0.43 Score=32.08 Aligned_cols=51 Identities=14% Similarity=0.168 Sum_probs=36.3
Q ss_pred cc-HHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 12 ER-TKLMVLLSILLNQSTFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 12 g~-~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
++ +++.+.+....+..++..+|+.++++++.++.+. -++..++++.+.++|
T Consensus 227 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~L 280 (392)
T 3qhx_A 227 TNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHSENAAAVAEFL 280 (392)
T ss_dssp ESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred ECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 55 6888877666666788899999999999887654 245556666555544
No 105
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=85.52 E-value=0.51 Score=31.45 Aligned_cols=36 Identities=11% Similarity=0.029 Sum_probs=25.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHhhccc
Q 035320 27 STFDGNPLATAVAIASLNVIRD--EKLAERSRAFEGIH 62 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~~--~~l~e~~~~~G~~L 62 (67)
.++..|+.+++++.++++.+++ +++.++..++.++|
T Consensus 281 ~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l 318 (432)
T 3a9z_A 281 RPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYL 318 (432)
T ss_dssp SCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3466899999999889987765 45566665555543
No 106
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=85.40 E-value=1.1 Score=29.05 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=27.2
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+.... .+|+.||++++++.+.|+.
T Consensus 225 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~ 259 (360)
T 3hdo_A 225 LAIARPEVIAALDKIR--DHYNLDRLAQAACVAALRD 259 (360)
T ss_dssp EEECCHHHHHHHHHHS--CSCCSCHHHHHHHHHHHHC
T ss_pred eEeeCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhcC
Confidence 4457889888876433 4588999999999999874
No 107
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=85.24 E-value=0.74 Score=29.87 Aligned_cols=35 Identities=9% Similarity=-0.108 Sum_probs=23.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhh----HHHHHHHhhccc
Q 035320 28 TFDGNPLATAVAIASLNVIRDEK----LAERSRAFEGIH 62 (67)
Q Consensus 28 Tf~Gnpla~AAala~l~~i~~~~----l~e~~~~~G~~L 62 (67)
+...|+++++++.++++.+++++ +.++.+++.+++
T Consensus 271 ~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l 309 (390)
T 1elu_A 271 VATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFL 309 (390)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 34568899998888888876644 445555554443
No 108
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=85.22 E-value=0.71 Score=30.43 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=23.9
Q ss_pred CCCHHHHHHHHHHHHHHhh---hhHHHHHHHhhccc
Q 035320 30 DGNPLATAVAIASLNVIRD---EKLAERSRAFEGIH 62 (67)
Q Consensus 30 ~Gnpla~AAala~l~~i~~---~~l~e~~~~~G~~L 62 (67)
..|+.+++++.++++.+.+ +++.++..++.++|
T Consensus 282 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 317 (416)
T 1qz9_A 282 TQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLF 317 (416)
T ss_dssp CCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 4688899999999998864 34666666666554
No 109
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=85.16 E-value=0.53 Score=31.07 Aligned_cols=36 Identities=6% Similarity=0.037 Sum_probs=30.6
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~ 44 (67)
|..+++++.+.+....+..+++.++++++++.+.++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 295 (417)
T 3g7q_A 260 IIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIK 295 (417)
T ss_dssp EEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHc
Confidence 456889999988777778899999999999998875
No 110
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=84.56 E-value=0.36 Score=32.44 Aligned_cols=36 Identities=8% Similarity=0.003 Sum_probs=28.8
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~ 44 (67)
|..+++++++.+....+..+++.|+++.+++.+.|+
T Consensus 268 ~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~ 303 (422)
T 3d6k_A 268 FFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFG 303 (422)
T ss_dssp EEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHC
T ss_pred EEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHh
Confidence 445789998888766666788899999999888775
No 111
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=84.24 E-value=0.91 Score=30.18 Aligned_cols=37 Identities=16% Similarity=0.154 Sum_probs=31.1
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++++.+....+..+++.++++++++.+.++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 299 (423)
T 3ez1_A 263 FVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTE 299 (423)
T ss_dssp EEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred EEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHh
Confidence 5568899998887777778899999999999888875
No 112
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=83.52 E-value=0.29 Score=32.50 Aligned_cols=49 Identities=16% Similarity=0.100 Sum_probs=31.4
Q ss_pred ccH----HHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHhhcc
Q 035320 12 ERT----KLMVLLSILLNQSTFDGNPLATAVAIASLNVIRD--EKLAERSRAFEGI 61 (67)
Q Consensus 12 g~~----~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~~--~~l~e~~~~~G~~ 61 (67)
+++ ++++.+....... ++.|+++++++.+.|+...+ +++.++.+++.++
T Consensus 261 ~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 315 (406)
T 1xi9_A 261 DPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDY 315 (406)
T ss_dssp CTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred cCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 677 8888776433323 78999999999999863322 3344445544444
No 113
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=83.16 E-value=0.54 Score=32.06 Aligned_cols=40 Identities=8% Similarity=0.035 Sum_probs=21.5
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHH-HHHHHHHHHHHHhh
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPL-ATAVAIASLNVIRD 48 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpl-a~AAala~l~~i~~ 48 (67)
|..+++++.+.+.+..+.+++++.+. .++++.+++..+.+
T Consensus 257 ~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~ 297 (447)
T 3h7f_A 257 LIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAAT 297 (447)
T ss_dssp EEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTS
T ss_pred EEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhC
Confidence 34477788777765444455554433 24444455555433
No 114
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=83.14 E-value=0.98 Score=29.10 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=25.4
Q ss_pred ccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHH
Q 035320 12 ERTKLMVLLSILLNQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 12 g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~ 44 (67)
+++++++.+... ..+|+.|+++++++.++|+
T Consensus 230 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~ 260 (361)
T 3ftb_A 230 NNKEIAAKIKAK--QNPWNINCFAEMAAINCLK 260 (361)
T ss_dssp SCHHHHHHHHTT--SCTTCSCHHHHHHHHHTSS
T ss_pred CCHHHHHHHHhh--CCCCCCCHHHHHHHHHHhc
Confidence 788988887643 3478999999999999876
No 115
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=82.55 E-value=3.4 Score=26.13 Aligned_cols=54 Identities=9% Similarity=-0.017 Sum_probs=32.7
Q ss_pred hccccHHHHHHhc--cc-------------CCCCCCCCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLS--IL-------------LNQSTFDGNPLATAVAIASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~--~~-------------~h~~Tf~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~L 62 (67)
|..+++++++.+. +. .....+.-|+.+++++.++++.+.++ ++.++..++.+++
T Consensus 196 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 267 (353)
T 2yrr_A 196 PIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWV 267 (353)
T ss_dssp EEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4457888877664 10 11223455788888888888887554 4555555555543
No 116
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=82.29 E-value=0.72 Score=30.46 Aligned_cols=36 Identities=8% Similarity=-0.057 Sum_probs=26.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHhhccc
Q 035320 27 STFDGNPLATAVAIASLNVIRD--EKLAERSRAFEGIH 62 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~~--~~l~e~~~~~G~~L 62 (67)
.++..|+.++++..++++.+++ +++.++.+++.++|
T Consensus 259 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l 296 (423)
T 3lvm_A 259 RSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRL 296 (423)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456688999988899988876 66667766666654
No 117
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=82.65 E-value=0.28 Score=32.44 Aligned_cols=36 Identities=6% Similarity=-0.075 Sum_probs=25.2
Q ss_pred ccccH-HHHHHhcccCCCCCC-CCCHHHHHHHHHHHHH
Q 035320 10 KNERT-KLMVLLSILLNQSTF-DGNPLATAVAIASLNV 45 (67)
Q Consensus 10 ~~g~~-~i~~~~~~~~h~~Tf-~Gnpla~AAala~l~~ 45 (67)
..+++ ++++.+....+..++ +.||++++++.++|+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (392)
T 3b1d_A 250 AIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRY 287 (392)
Confidence 33554 487777665555555 4699999999999874
No 118
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=81.39 E-value=1.5 Score=28.92 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=28.6
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+.+.....|++.++++.+++.+.|+.
T Consensus 245 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 281 (385)
T 1b5p_A 245 YACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTN 281 (385)
T ss_dssp EEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHC
T ss_pred EEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC
Confidence 4557889988876655557888999999988888853
No 119
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=80.95 E-value=1.8 Score=28.70 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=22.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcc
Q 035320 27 STFDGNPLATAVAIASLNVIRDEKLAERSRAFEGI 61 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~ 61 (67)
.++..+|++++++.+.++.+++ +.++.+++.++
T Consensus 254 ~~~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~ 286 (399)
T 2oga_A 254 TNSRLDEMQAAVLRIRLAHLDS--WNGRRSALAAE 286 (399)
T ss_dssp CBCCCCHHHHHHHHHHHHTHHH--HHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 4466789999999999887643 34444444443
No 120
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=80.67 E-value=0.87 Score=30.27 Aligned_cols=36 Identities=17% Similarity=0.075 Sum_probs=27.0
Q ss_pred hccccH-HHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERT-KLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~-~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++ ++.+.+.......+ +.|+++++++.++|+.
T Consensus 255 ~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~ 291 (409)
T 2gb3_A 255 CLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNL 291 (409)
T ss_dssp EEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTC
T ss_pred EEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhc
Confidence 344677 88888766555556 8999999999998853
No 121
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=80.37 E-value=1.2 Score=29.93 Aligned_cols=50 Identities=14% Similarity=0.050 Sum_probs=27.0
Q ss_pred ccc-H-HHHHHhccc----CCCCCCCCCHHHHHHHHH-HHHHHhhhhHHHHHHHhhc
Q 035320 11 NER-T-KLMVLLSIL----LNQSTFDGNPLATAVAIA-SLNVIRDEKLAERSRAFEG 60 (67)
Q Consensus 11 ~g~-~-~i~~~~~~~----~h~~Tf~Gnpla~AAala-~l~~i~~~~l~e~~~~~G~ 60 (67)
+++ + ++++.+... .+..++++++..+.++.+ +++.+.+++.+++..+.++
T Consensus 277 ~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 333 (467)
T 1ax4_A 277 AIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVK 333 (467)
T ss_dssp EESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 355 5 777655321 334688888877665444 5665544444444333333
No 122
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=80.31 E-value=5.2 Score=25.66 Aligned_cols=37 Identities=11% Similarity=0.078 Sum_probs=24.1
Q ss_pred CCCC-CCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhccc
Q 035320 26 QSTF-DGNPLATAVAIASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 26 ~~Tf-~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~L 62 (67)
...| ..|+.++++..++++.+.+. ++.++.+++.++|
T Consensus 238 ~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 278 (384)
T 3zrp_A 238 AAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAI 278 (384)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 3444 45777888787888887654 5666666665544
No 123
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=80.17 E-value=1.4 Score=29.28 Aligned_cols=39 Identities=13% Similarity=0.070 Sum_probs=27.3
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIR 47 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~ 47 (67)
|..+++++++.+...........+|+.++++.++++.+.
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~ 255 (374)
T 2aeu_A 217 LLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFN 255 (374)
T ss_dssp EEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCC
T ss_pred EEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHh
Confidence 345888988877543222223579999999999998764
No 124
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=80.16 E-value=2.1 Score=27.44 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=26.8
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+...... |+.|+++++++.++|+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~ 258 (354)
T 3ly1_A 224 YAVAHPTVIALMGRYVAG--EKINFSGVDAALASMND 258 (354)
T ss_dssp EEECCHHHHHHHGGGTTC--SCCCHHHHHHHHHHTTC
T ss_pred eeecCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhcC
Confidence 445788988888654333 88999999999998763
No 125
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=79.86 E-value=0.16 Score=33.39 Aligned_cols=36 Identities=8% Similarity=0.036 Sum_probs=29.1
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~ 44 (67)
|..+++++++.+....+..+++.+|++++++.+.|+
T Consensus 264 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 299 (407)
T 3nra_A 264 VAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFD 299 (407)
T ss_dssp EEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTC
T ss_pred EEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHh
Confidence 455799999888777777888999999988877764
No 126
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=78.87 E-value=5.8 Score=25.67 Aligned_cols=34 Identities=12% Similarity=0.006 Sum_probs=22.3
Q ss_pred CCCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhccc
Q 035320 29 FDGNPLATAVAIASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 29 f~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~L 62 (67)
+..|+.++++..++++.+.+. ++.++..++.+++
T Consensus 246 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l 282 (392)
T 2z9v_A 246 FTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAM 282 (392)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 345788888888888877653 4555555555543
No 127
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=78.55 E-value=0.32 Score=32.74 Aligned_cols=23 Identities=13% Similarity=0.164 Sum_probs=18.2
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHH
Q 035320 23 LLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 23 ~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
..+..++++++++++++.++++.
T Consensus 315 ~~~~~~~~~~~~~~~a~~~~l~~ 337 (449)
T 3qgu_A 315 VMTTCFNGASNIVQAGGLACLQP 337 (449)
T ss_dssp HHHHSCCCCCHHHHHHHHHHTSH
T ss_pred HhhcccCCCCHHHHHHHHHHHhh
Confidence 34456668999999999999865
No 128
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=78.53 E-value=1.4 Score=28.68 Aligned_cols=35 Identities=17% Similarity=0.110 Sum_probs=27.1
Q ss_pred hcc-ccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKN-ERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~-g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|.. +++++.+.+.+.. .+|+.|+++++++.+.|+.
T Consensus 227 ~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~ 262 (364)
T 1lc5_A 227 YLVNSDDAAMARMRRQQ--MPWSVNALAALAGEVALQD 262 (364)
T ss_dssp EEECCCHHHHHHHHHHS--CTTCSCHHHHHHHHHGGGC
T ss_pred EEEECCHHHHHHHHHhC--CCCCCCHHHHHHHHHHHhC
Confidence 455 8899888776432 4789999999999988764
No 129
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=78.53 E-value=0.4 Score=31.82 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=23.7
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcc
Q 035320 25 NQSTF-DGNPLATAVAIASLNVIRDEKLAERSRAFEGI 61 (67)
Q Consensus 25 h~~Tf-~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~ 61 (67)
+..+| +.|+++.+++.+.|+...-+++.++.++..++
T Consensus 270 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 307 (400)
T 3asa_A 270 LSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDL 307 (400)
T ss_dssp HHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34455 58999999999888764334455555544443
No 130
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=78.38 E-value=6.2 Score=25.39 Aligned_cols=53 Identities=9% Similarity=-0.100 Sum_probs=31.8
Q ss_pred ccccHHHHHHhcccC-----------------CCCCCCCCHHHHHHHHHHHHHHhhh----hHHHHHHHhhccc
Q 035320 10 KNERTKLMVLLSILL-----------------NQSTFDGNPLATAVAIASLNVIRDE----KLAERSRAFEGIH 62 (67)
Q Consensus 10 ~~g~~~i~~~~~~~~-----------------h~~Tf~Gnpla~AAala~l~~i~~~----~l~e~~~~~G~~L 62 (67)
..+++++.+.+.+.. .+..+..+..+++++.++++.++++ ++.++..++.++|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l 290 (376)
T 3f0h_A 217 IVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADF 290 (376)
T ss_dssp EEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 457888887765321 1224455566667888888887665 3555555554443
No 131
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=77.55 E-value=0.53 Score=31.52 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=30.7
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+....+..+++.++++++++.+.++.
T Consensus 286 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 322 (444)
T 3if2_A 286 IIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVAN 322 (444)
T ss_dssp EEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHT
T ss_pred EEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHc
Confidence 5568899998887777778899999999999888764
No 132
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=76.00 E-value=7.7 Score=25.24 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=23.0
Q ss_pred CCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhccc
Q 035320 30 DGNPLATAVAIASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 30 ~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~L 62 (67)
..|+.++++..++++.+.+. ++.++..++.++|
T Consensus 267 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l 302 (416)
T 3isl_A 267 TEATTMLYALREGVRLVLEEGLETRFERHRHHEAAL 302 (416)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788888888888887654 5666666655544
No 133
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=75.82 E-value=5.3 Score=25.55 Aligned_cols=40 Identities=13% Similarity=0.115 Sum_probs=24.0
Q ss_pred hccccHHHHHHhcccC-----------CCCCCCC-CHHHHHHHHHHHHHHhh
Q 035320 9 YKNERTKLMVLLSILL-----------NQSTFDG-NPLATAVAIASLNVIRD 48 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~-----------h~~Tf~G-npla~AAala~l~~i~~ 48 (67)
|..+++++.+.+.+.. ++.+++. ++.+.++..++++.+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 256 (360)
T 1w23_A 205 VVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKD 256 (360)
T ss_dssp EEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4557888876654321 2344444 56666777777877654
No 134
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=75.57 E-value=2 Score=28.34 Aligned_cols=50 Identities=8% Similarity=0.084 Sum_probs=29.9
Q ss_pred cHHHHHHhcc---cCCCCCCCC-CHHHHHHHHHHHHHHh--------hhhHHHHHHHhhccc
Q 035320 13 RTKLMVLLSI---LLNQSTFDG-NPLATAVAIASLNVIR--------DEKLAERSRAFEGIH 62 (67)
Q Consensus 13 ~~~i~~~~~~---~~h~~Tf~G-npla~AAala~l~~i~--------~~~l~e~~~~~G~~L 62 (67)
++++++.+.. ..+..+|++ |+++++++.++|+... -+++.++.++..++|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 337 (412)
T 1ajs_A 276 EPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSEL 337 (412)
T ss_dssp SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 7775443311 125567774 9999999999987542 134455555554443
No 135
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=74.69 E-value=3.1 Score=26.69 Aligned_cols=37 Identities=8% Similarity=-0.089 Sum_probs=23.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 26 QSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 26 ~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
+++++.++++++++++.+....-+++.++..++.++|
T Consensus 285 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l 321 (397)
T 3f9t_A 285 GTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYL 321 (397)
T ss_dssp SSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4555667888888888775544455666666655543
No 136
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=74.46 E-value=1.3 Score=29.58 Aligned_cols=54 Identities=6% Similarity=0.036 Sum_probs=32.9
Q ss_pred hccccH-HHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 9 YKNERT-KLMVLLSILLNQSTFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~-~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
|..+++ ++++.+.+.........+|..++++++.++.+. -++..+++..+.++|
T Consensus 217 ~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l 273 (389)
T 3acz_A 217 VSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKTLPIRMQIHMENGLKVAKFL 273 (389)
T ss_dssp EEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHH
Confidence 344777 888777543322223478999999998887653 244555555554443
No 137
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=74.28 E-value=2.9 Score=27.58 Aligned_cols=31 Identities=6% Similarity=0.088 Sum_probs=20.9
Q ss_pred HHHHhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 035320 16 LMVLLSILLNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 16 i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i 46 (67)
+.+.+.......+.+.++++.+++.+.|+..
T Consensus 283 l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 313 (412)
T 1yaa_A 283 VTSQLAKIIRSEVSNPPAYGAKIVAKLLETP 313 (412)
T ss_dssp HHHHHHHHHHTTTSSCCHHHHHHHHHHHHSH
T ss_pred HHHHHHHHHhhccCCCChHHHHHHHHHhCCH
Confidence 6666654333344455999999998888754
No 138
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=73.68 E-value=1.9 Score=29.10 Aligned_cols=53 Identities=17% Similarity=0.070 Sum_probs=33.4
Q ss_pred ccc-cHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 10 KNE-RTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 10 ~~g-~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
..+ ++++.+.+.+..+..+...+|+.++++++.++.+. -+...+++..+.++|
T Consensus 226 v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~r~~~~~~n~~~l~~~l 281 (403)
T 3cog_A 226 VSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFL 281 (403)
T ss_dssp EEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 346 47887777654444456679999999888887653 244555555554443
No 139
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=73.49 E-value=8.8 Score=24.28 Aligned_cols=36 Identities=8% Similarity=-0.068 Sum_probs=24.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhh--hHHHHHHHhhccc
Q 035320 27 STFDGNPLATAVAIASLNVIRDE--KLAERSRAFEGIH 62 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~~~--~l~e~~~~~G~~L 62 (67)
.++..|+.+++++.++++.+++. ++.++.+++.++|
T Consensus 227 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l 264 (352)
T 1iug_A 227 SAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALL 264 (352)
T ss_dssp CSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888999899999887654 5555555555543
No 140
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=73.38 E-value=2 Score=28.83 Aligned_cols=31 Identities=13% Similarity=-0.011 Sum_probs=23.3
Q ss_pred HHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 14 TKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 14 ~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
+++.+.+.... ..+++.|+++++++.++|+.
T Consensus 286 ~~i~~~l~~~~-~~~~~~~~~~~~a~~~~L~~ 316 (427)
T 3dyd_A 286 NEIRDGLVKLS-QRILGPCTIVQGALKSILCR 316 (427)
T ss_dssp HHHHHHHHHHH-HHHCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hccCCCCHHHHHHHHHHHHh
Confidence 56777665432 23789999999999999985
No 141
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=72.66 E-value=5.2 Score=26.20 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=21.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcc
Q 035320 27 STFDGNPLATAVAIASLNVIRDEKLAERSRAFEGI 61 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~ 61 (67)
.++..+++.++++++.++.++ ++.++.++..++
T Consensus 249 ~~~~~~~~~aa~~l~~l~~l~--~~~~~~~~~~~~ 281 (390)
T 3b8x_A 249 YNVRPLEMSGAIGIEQLKKLP--RFISVRRKNAEY 281 (390)
T ss_dssp CBCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred cccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 345589999999999887764 344444444433
No 142
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=71.79 E-value=2.8 Score=27.48 Aligned_cols=53 Identities=9% Similarity=-0.053 Sum_probs=24.9
Q ss_pred cccc-HHHHHHhccc-CCCCCCCCCH-HHHHHHHHHHHHHhh--hhHHHHHHHhhccc
Q 035320 10 KNER-TKLMVLLSIL-LNQSTFDGNP-LATAVAIASLNVIRD--EKLAERSRAFEGIH 62 (67)
Q Consensus 10 ~~g~-~~i~~~~~~~-~h~~Tf~Gnp-la~AAala~l~~i~~--~~l~e~~~~~G~~L 62 (67)
.+++ +++.+.+.+. .++.+.+.++ ..++++.+..+.+++ +++.++..++.++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l 302 (425)
T 3ecd_A 245 VLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQAL 302 (425)
T ss_dssp EEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3455 5777766543 2322323344 444444444444433 25666666666554
No 143
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=71.69 E-value=6.7 Score=25.10 Aligned_cols=36 Identities=8% Similarity=0.022 Sum_probs=26.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHhhccc
Q 035320 27 STFDGNPLATAVAIASLNVIRD--EKLAERSRAFEGIH 62 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~~--~~l~e~~~~~G~~L 62 (67)
.+++.|+++++++.++|+.+.+ +++.++..++.++|
T Consensus 235 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l 272 (384)
T 1eg5_A 235 RSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKL 272 (384)
T ss_dssp BCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 5778899999999999987643 45555655555543
No 144
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=70.81 E-value=2.9 Score=27.83 Aligned_cols=35 Identities=9% Similarity=-0.165 Sum_probs=25.1
Q ss_pred hccc-cHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNE-RTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g-~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+ ++++.+.+... ..+|+.|+++++++.++|+.
T Consensus 279 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~ 314 (428)
T 1iay_A 279 IIYSFNDDVVNCARKM--SSFGLVSTQTQYFLAAMLSD 314 (428)
T ss_dssp EEEESCHHHHHHHHHH--HTTSCCCHHHHHHHHHHTTC
T ss_pred EEEeCCHHHHHHHHHH--HhcccCCHHHHHHHHHHhcC
Confidence 3345 68888777532 34578999999999888864
No 145
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=69.71 E-value=14 Score=23.67 Aligned_cols=34 Identities=15% Similarity=-0.014 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhccc
Q 035320 29 FDGNPLATAVAIASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 29 f~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~L 62 (67)
+..|+.+++++.++++.+.+. ++.++.+++.++|
T Consensus 257 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 293 (385)
T 2bkw_A 257 ATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWF 293 (385)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 457888888888899887643 3455555555543
No 146
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=68.40 E-value=2.7 Score=27.54 Aligned_cols=53 Identities=11% Similarity=-0.009 Sum_probs=23.0
Q ss_pred hccccH---HHHHHhcccCCCCCCCCCHHHH-HHHHHHHHHHh-h--hhHHHHHHHhhcc
Q 035320 9 YKNERT---KLMVLLSILLNQSTFDGNPLAT-AVAIASLNVIR-D--EKLAERSRAFEGI 61 (67)
Q Consensus 9 ~~~g~~---~i~~~~~~~~h~~Tf~Gnpla~-AAala~l~~i~-~--~~l~e~~~~~G~~ 61 (67)
|.++++ ++.+.+....+.+++++.+... ++..+++..+. + +++.++..+..++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 300 (420)
T 3gbx_A 241 LILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKA 300 (420)
T ss_dssp EEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Confidence 344665 7777776554445554443332 22222333332 2 3445555555444
No 147
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=68.12 E-value=1.4 Score=29.45 Aligned_cols=28 Identities=14% Similarity=0.103 Sum_probs=19.9
Q ss_pred HHHhcccCCCCCCCCCHHHHHHHHHHHH
Q 035320 17 MVLLSILLNQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 17 ~~~~~~~~h~~Tf~Gnpla~AAala~l~ 44 (67)
.+.+.......+++.+|++.+++.++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (432)
T 3ei9_A 297 AKDFNRIICTCFNGASNISQAGALACLT 324 (432)
T ss_dssp HHHHHHHHHHSCCCSCHHHHHHHHHHSS
T ss_pred HHHHHHHhccccCCCCHHHHHHHHHHHh
Confidence 4545444444567789999999998874
No 148
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=67.95 E-value=16 Score=23.55 Aligned_cols=32 Identities=9% Similarity=-0.064 Sum_probs=18.7
Q ss_pred CCHHHHHHHHHHHHHHhhh---hHHHHHHHhhccc
Q 035320 31 GNPLATAVAIASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 31 Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~L 62 (67)
.|+.+.+++.++++.+.++ ++.++.+++.+++
T Consensus 261 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 295 (393)
T 2huf_A 261 ISSTLLYGLREAIAMACEEGLPALIARHEDCAKRL 295 (393)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 4566666667788877543 3455555555443
No 149
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=67.66 E-value=13 Score=24.17 Aligned_cols=39 Identities=5% Similarity=-0.168 Sum_probs=25.7
Q ss_pred hcccc-HHHHHHhccc-CCCCCCCCCHHHHHHHHHHHHHHh
Q 035320 9 YKNER-TKLMVLLSIL-LNQSTFDGNPLATAVAIASLNVIR 47 (67)
Q Consensus 9 ~~~g~-~~i~~~~~~~-~h~~Tf~Gnpla~AAala~l~~i~ 47 (67)
|.+++ +++.+.+... .++.+.+.++..+++..+++....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~ 276 (417)
T 3n0l_A 236 IIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNL 276 (417)
T ss_dssp EEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHH
Confidence 34466 7888877654 444555667888888777776643
No 150
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=67.26 E-value=4.3 Score=28.00 Aligned_cols=38 Identities=13% Similarity=-0.130 Sum_probs=23.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhccc
Q 035320 25 NQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGIH 62 (67)
Q Consensus 25 h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~L 62 (67)
++++++++++++.+++..+....-+++.++..+..++|
T Consensus 352 ~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l 389 (514)
T 3mad_A 352 AGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRL 389 (514)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 55666666777777777665544456666666665554
No 151
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=65.41 E-value=2.5 Score=28.19 Aligned_cols=37 Identities=3% Similarity=-0.152 Sum_probs=29.5
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+....+..+++.++++.+++.+.++.
T Consensus 270 ~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 306 (427)
T 3ppl_A 270 FFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGD 306 (427)
T ss_dssp EEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred EEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence 5568899988887666677889999999988887653
No 152
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=65.14 E-value=7 Score=25.13 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=25.9
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+.... .+|+.|+++.+++.+.|+.
T Consensus 238 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~ 272 (365)
T 3get_A 238 YGIANANIISAFYKLR--APFNVSNLALKAAVAAMDD 272 (365)
T ss_dssp EEEECHHHHHHHHHHS--CTTCSCHHHHHHHHHHHTC
T ss_pred EEEcCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhCC
Confidence 3446888888775432 3577999999999998863
No 153
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=64.99 E-value=20 Score=23.08 Aligned_cols=33 Identities=15% Similarity=0.033 Sum_probs=21.0
Q ss_pred CCCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhcc
Q 035320 29 FDGNPLATAVAIASLNVIRDE---KLAERSRAFEGI 61 (67)
Q Consensus 29 f~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~ 61 (67)
+..++.+.+++.++++.+.++ ++.++.+++.++
T Consensus 258 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 293 (396)
T 2ch1_A 258 HTVASNLIFALREALAQIAEEGLENQIKRRIECAQI 293 (396)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 345777888888888877443 345555555444
No 154
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=64.90 E-value=4.7 Score=26.27 Aligned_cols=34 Identities=15% Similarity=0.058 Sum_probs=21.1
Q ss_pred cHHHHHHhcc-c--CCCCCCCC-CHHHHHHHHHHHHHH
Q 035320 13 RTKLMVLLSI-L--LNQSTFDG-NPLATAVAIASLNVI 46 (67)
Q Consensus 13 ~~~i~~~~~~-~--~h~~Tf~G-npla~AAala~l~~i 46 (67)
++++++.+.. . .+..+|++ |+++++++.++|+..
T Consensus 261 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 298 (394)
T 2ay1_A 261 DAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTP 298 (394)
T ss_dssp SHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSH
T ss_pred CHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcCh
Confidence 6665544321 1 23345554 999999999988754
No 155
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=64.64 E-value=9.1 Score=24.94 Aligned_cols=31 Identities=13% Similarity=0.255 Sum_probs=20.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhc
Q 035320 28 TFDGNPLATAVAIASLNVIRDEKLAERSRAFEG 60 (67)
Q Consensus 28 Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~ 60 (67)
.+..+++.+|+++..++.++ ++.++.+++.+
T Consensus 249 ~~~~~~l~aa~~~~~~~~~~--~~~~~~~~~~~ 279 (391)
T 3dr4_A 249 NYRMTNIQAAIGLAQLERVD--EHLAARERVVG 279 (391)
T ss_dssp BCBCCHHHHHHHHHHHHTHH--HHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 37889999999888776553 24444444443
No 156
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=64.27 E-value=7.2 Score=24.97 Aligned_cols=36 Identities=19% Similarity=0.124 Sum_probs=27.3
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i 46 (67)
|..+++++.+.+.... .+++.|+++++++.+.|+..
T Consensus 208 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 243 (350)
T 3fkd_A 208 YIVANKDFMKRVAAFS--TPWAVNALAIEAAKFILIHP 243 (350)
T ss_dssp EEECCHHHHHHHHTTC--CTTCSCHHHHHHHHHHHHCT
T ss_pred eEEeCHHHHHHHHHhC--CCCCCCHHHHHHHHHHHhCH
Confidence 3446888888776443 46889999999999988753
No 157
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=62.24 E-value=11 Score=25.26 Aligned_cols=17 Identities=24% Similarity=0.280 Sum_probs=13.9
Q ss_pred CCCHHHHHHHHHHHHHH
Q 035320 30 DGNPLATAVAIASLNVI 46 (67)
Q Consensus 30 ~Gnpla~AAala~l~~i 46 (67)
..+++.++++++.|+.+
T Consensus 290 ~~~~~~aa~~l~~l~~~ 306 (437)
T 3bb8_A 290 KITDMQAACGLAQLERI 306 (437)
T ss_dssp CCBHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 34699999999998765
No 158
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=61.41 E-value=6.5 Score=25.32 Aligned_cols=34 Identities=12% Similarity=0.101 Sum_probs=21.5
Q ss_pred CCCCCHHHHHHHHHHHHHHhh----hhHHHHHHHhhcc
Q 035320 28 TFDGNPLATAVAIASLNVIRD----EKLAERSRAFEGI 61 (67)
Q Consensus 28 Tf~Gnpla~AAala~l~~i~~----~~l~e~~~~~G~~ 61 (67)
.+.-|+.+.+++.++|+.+++ +++.++.+++.++
T Consensus 237 ~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~ 274 (362)
T 2c0r_A 237 YNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASL 274 (362)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 345677888888888887765 3444444444443
No 159
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=60.95 E-value=13 Score=23.41 Aligned_cols=35 Identities=14% Similarity=-0.012 Sum_probs=26.1
Q ss_pred hccccHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+++++.+.+... ..+++.|+++.+++.+.|+.
T Consensus 209 ~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~ 243 (337)
T 3p1t_A 209 ALFGPSELIAAMKRK--QWFCNVGTLDLHALEAALDN 243 (337)
T ss_dssp EEECCHHHHHHHHTT--SCTTCSCHHHHHHHHHHHTC
T ss_pred EEEeCHHHHHHHHhh--cCCCCCCHHHHHHHHHHhCC
Confidence 456788888877643 45678899999888887754
No 160
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=60.07 E-value=13 Score=24.80 Aligned_cols=51 Identities=10% Similarity=0.020 Sum_probs=26.0
Q ss_pred ccc-cHHHHHHhccc----CCCCCCCC-CHHHHHH-HHHHHHHHhhhhHHHHHHHhhcc
Q 035320 10 KNE-RTKLMVLLSIL----LNQSTFDG-NPLATAV-AIASLNVIRDEKLAERSRAFEGI 61 (67)
Q Consensus 10 ~~g-~~~i~~~~~~~----~h~~Tf~G-npla~AA-ala~l~~i~~~~l~e~~~~~G~~ 61 (67)
..+ ++++.+.+... ...+++.| |+..+++ +++.++.++ +++.++..++.++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~~~~~~~~~~~~ 324 (456)
T 2ez2_A 267 LCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YEYIEHRVKQVRY 324 (456)
T ss_dssp EEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH-HHHHHHHHHHHHH
Confidence 345 57877765321 12234444 5455555 666665443 4555555555444
No 161
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=59.97 E-value=8.2 Score=25.68 Aligned_cols=34 Identities=9% Similarity=-0.170 Sum_probs=23.8
Q ss_pred ccc-cHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 10 KNE-RTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 10 ~~g-~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
.++ ++++.+.+.. +..++..++++++++.+.++.
T Consensus 285 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 319 (435)
T 3piu_A 285 IYSNDDMVVAAATK--MSSFGLVSSQTQHLLSAMLSD 319 (435)
T ss_dssp EEESCHHHHHHHHH--HGGGSCCCHHHHHHHHHHHHC
T ss_pred EEeCCHHHHHHHHH--HhhcCCCCHHHHHHHHHHhcC
Confidence 345 6777776643 345667899999998888763
No 162
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=59.10 E-value=14 Score=23.36 Aligned_cols=34 Identities=3% Similarity=-0.062 Sum_probs=20.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhcc
Q 035320 28 TFDGNPLATAVAIASLNVIRDE---KLAERSRAFEGI 61 (67)
Q Consensus 28 Tf~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~ 61 (67)
.+..++.+.++..++++.+.++ ++.++..+..++
T Consensus 241 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 277 (362)
T 3ffr_A 241 PETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAAL 277 (362)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 4456777777777888876543 344444444433
No 163
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=58.13 E-value=14 Score=23.95 Aligned_cols=19 Identities=26% Similarity=0.429 Sum_probs=14.3
Q ss_pred CCCCHHHHHHHHHHHHHHh
Q 035320 29 FDGNPLATAVAIASLNVIR 47 (67)
Q Consensus 29 f~Gnpla~AAala~l~~i~ 47 (67)
+..+++.++++++.++.++
T Consensus 242 ~~~~~~~~a~~~~~l~~~~ 260 (393)
T 1mdo_A 242 YNLPDLNAAIALAQLQKLD 260 (393)
T ss_dssp CCCCHHHHHHHHHHHHTHH
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 4458999999888776553
No 164
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=58.03 E-value=6 Score=26.45 Aligned_cols=52 Identities=13% Similarity=0.083 Sum_probs=30.4
Q ss_pred ccc-HHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 11 NER-TKLMVLLSILLNQSTFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 11 ~g~-~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
.++ +++.+.+.+.........+|..++++.+.++.+. -+...+++..+.++|
T Consensus 217 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L 271 (393)
T 1n8p_A 217 ATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFL 271 (393)
T ss_dssp EESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 354 7787776543211112346888888888877663 344556666655544
No 165
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=57.67 E-value=11 Score=24.74 Aligned_cols=20 Identities=10% Similarity=-0.139 Sum_probs=17.0
Q ss_pred CCCCCCCHHHHHHHHHHHHH
Q 035320 26 QSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 26 ~~Tf~Gnpla~AAala~l~~ 45 (67)
..+|+.|+++++++.++|+.
T Consensus 286 ~~~~~~~~~~~~a~~~~l~~ 305 (416)
T 1bw0_A 286 MLVCGPCTVVQAALGEALLN 305 (416)
T ss_dssp HHHTCSCHHHHHHHHHHHHS
T ss_pred ccccCCCcHHHHHHHHHHhc
Confidence 35788999999999999874
No 166
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=55.53 E-value=13 Score=23.83 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=20.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcc
Q 035320 27 STFDGNPLATAVAIASLNVIRDEKLAERSRAFEGI 61 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~ 61 (67)
.+++.+++.+++++..++.++ ++.++.++..++
T Consensus 227 ~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~ 259 (375)
T 2fnu_A 227 HNFRLNEIQSALGLSQLKKAP--FLMQKREEAALT 259 (375)
T ss_dssp CBCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 346788999998887765443 344444444443
No 167
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=54.33 E-value=6.6 Score=27.22 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=31.1
Q ss_pred hccccHHHHHHhcccCCCCCCCC--CHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 9 YKNERTKLMVLLSILLNQSTFDG--NPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~~h~~Tf~G--npla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
+..+++++++.+.... .++++ +|+.+..+++.++.+. -++..+++..+.++|
T Consensus 273 ~l~~~~~l~~~l~~~~--~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L 328 (445)
T 1qgn_A 273 CISGPLKLVSEIRNLH--HILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEIL 328 (445)
T ss_dssp EEEECHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHH--HHhCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3447888887764321 22333 7888887777776653 244556666665554
No 168
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=53.50 E-value=20 Score=23.15 Aligned_cols=35 Identities=14% Similarity=0.076 Sum_probs=23.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcc
Q 035320 25 NQSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGI 61 (67)
Q Consensus 25 h~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~ 61 (67)
.+.++..+++.+|++++.++.++ ++.++.+++.++
T Consensus 225 ~g~~~~~~~~~aa~~~~~~~~~~--~~~~~~~~~~~~ 259 (373)
T 3frk_A 225 KGFNSRLDELQAGFLRVKLKYLD--KWNEERRKIAQK 259 (373)
T ss_dssp CCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 34567789999999888776553 344555544443
No 169
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=52.61 E-value=10 Score=24.59 Aligned_cols=19 Identities=11% Similarity=0.204 Sum_probs=14.6
Q ss_pred CCCCC-CHHHHHHHHHHHHH
Q 035320 27 STFDG-NPLATAVAIASLNV 45 (67)
Q Consensus 27 ~Tf~G-npla~AAala~l~~ 45 (67)
.+|++ |+++++++.++|+.
T Consensus 281 ~~~~~~~~~~~~a~~~~l~~ 300 (396)
T 2q7w_A 281 ANYSNPPAHGASVVATILSN 300 (396)
T ss_dssp TTTSSCCHHHHHHHHHHHTS
T ss_pred hccCCCCcHHHHHHHHHhcC
Confidence 45554 99999999888754
No 170
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=51.54 E-value=19 Score=24.17 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHHHHHHhh---hhHHHHHHHhhccc
Q 035320 30 DGNPLATAVAIASLNVIRD---EKLAERSRAFEGIH 62 (67)
Q Consensus 30 ~Gnpla~AAala~l~~i~~---~~l~e~~~~~G~~L 62 (67)
..|++++++..++++.+.+ +++.++..++.+++
T Consensus 333 t~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l 368 (465)
T 3e9k_A 333 NPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYL 368 (465)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 5788999999999998875 55666666666554
No 171
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=51.41 E-value=12 Score=24.58 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=19.1
Q ss_pred CCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcc
Q 035320 30 DGNPLATAVAIASLNVIRDEKLAERSRAFEGI 61 (67)
Q Consensus 30 ~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~ 61 (67)
+.+|+.++++++.++.+++ ..++.++..++
T Consensus 229 ~~~~~~aa~~l~~l~~l~~--~~~~~~~~~~~ 258 (394)
T 1o69_A 229 RLSNVLGAIGVAQMEVLEQ--RVLKKREIYEW 258 (394)
T ss_dssp BCCHHHHHHHHHHHTTHHH--HHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 3688999998887766543 34444444443
No 172
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=50.21 E-value=26 Score=22.55 Aligned_cols=35 Identities=0% Similarity=-0.173 Sum_probs=24.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHhhccc
Q 035320 28 TFDGNPLATAVAIASLNVIRD--EKLAERSRAFEGIH 62 (67)
Q Consensus 28 Tf~Gnpla~AAala~l~~i~~--~~l~e~~~~~G~~L 62 (67)
....|+.++++..++++.+.+ +++.++.+++.++|
T Consensus 260 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l 296 (400)
T 3vax_A 260 PGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRL 296 (400)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 445678888888888887765 56666666665544
No 173
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=49.68 E-value=11 Score=26.12 Aligned_cols=53 Identities=17% Similarity=0.135 Sum_probs=28.9
Q ss_pred hcccc-HHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhcc
Q 035320 9 YKNER-TKLMVLLSILLNQSTFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGI 61 (67)
Q Consensus 9 ~~~g~-~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~ 61 (67)
|..++ +++.+.+........++-+|++++++++.++.+. -++..+++..+.++
T Consensus 290 ~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~ 345 (464)
T 1ibj_A 290 VLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMY 345 (464)
T ss_dssp EEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 34466 5777776543211223457999988888876432 12333444444443
No 174
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=48.62 E-value=11 Score=24.73 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=23.0
Q ss_pred cccHH----HHHHhcccCCCCCCCCCHHHHHHHHHHHH
Q 035320 11 NERTK----LMVLLSILLNQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 11 ~g~~~----i~~~~~~~~h~~Tf~Gnpla~AAala~l~ 44 (67)
+++++ +.+.+......++++.++++.+++.+.|+
T Consensus 274 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 311 (409)
T 4eu1_A 274 TASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILK 311 (409)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhC
Confidence 56777 55544443345667778999888888876
No 175
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=46.62 E-value=29 Score=22.90 Aligned_cols=28 Identities=21% Similarity=0.348 Sum_probs=17.3
Q ss_pred CCCHHHHHHHHHHHHHHhhhhHHHHHHHhh
Q 035320 30 DGNPLATAVAIASLNVIRDEKLAERSRAFE 59 (67)
Q Consensus 30 ~Gnpla~AAala~l~~i~~~~l~e~~~~~G 59 (67)
.-+++++++++..++.+++ +.++.+++.
T Consensus 243 ~~~~~~aa~~l~~~~~~~~--~~~~~~~~~ 270 (424)
T 2po3_A 243 KMSEAAAAMGLTSLDAFPE--VIDRNRRNH 270 (424)
T ss_dssp CCCHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 4468999998887765542 444444433
No 176
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=43.46 E-value=36 Score=21.58 Aligned_cols=37 Identities=8% Similarity=-0.077 Sum_probs=22.0
Q ss_pred hccccHHHHHHhcc---cCCCCCCCCCHHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSI---LLNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 9 ~~~g~~~i~~~~~~---~~h~~Tf~Gnpla~AAala~l~~i 46 (67)
|..+++++++.+.. ...++++..++.+++ +.+.++..
T Consensus 217 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a-~~~~l~~~ 256 (359)
T 3pj0_A 217 ILAGNDDFVQEAKIWKRRYGGDLISLYPYILS-ADYYFEKR 256 (359)
T ss_dssp EEEECHHHHHHHHHHHHHTTCCCSCCHHHHHH-HHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHhCCCcchhHHHHHH-HHHHHHHH
Confidence 45688999887753 234455656666544 44555543
No 177
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=40.77 E-value=47 Score=20.91 Aligned_cols=35 Identities=14% Similarity=-0.046 Sum_probs=23.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHhhccc
Q 035320 28 TFDGNPLATAVAIASLNVIRD--EKLAERSRAFEGIH 62 (67)
Q Consensus 28 Tf~Gnpla~AAala~l~~i~~--~~l~e~~~~~G~~L 62 (67)
....|+.++++..++++.+++ +++.++..++.++|
T Consensus 232 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l 268 (382)
T 4hvk_A 232 SGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRI 268 (382)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 344588888888888886654 45666666555543
No 178
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=40.42 E-value=13 Score=25.23 Aligned_cols=51 Identities=4% Similarity=0.003 Sum_probs=31.7
Q ss_pred ccccHHHHH-Hhcc--cCCCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 10 KNERTKLMV-LLSI--LLNQSTFDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 10 ~~g~~~i~~-~~~~--~~h~~Tf~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
.+++++.++ .+.. ..++.+. +|+.+++++..++.+. -++..+++..+.++|
T Consensus 240 vv~~~~~~~~~l~~~~~~~g~~~--~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L 295 (414)
T 3ndn_A 240 ILGDREYIDGPVQKLMRHTGPAM--SAFNAWVLLKGLETLAIRVQHSNASAQRIAEFL 295 (414)
T ss_dssp EEECHHHHTTHHHHHHHHHCCCC--CHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHcCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446777665 4432 2334443 7999988888877664 255667776666655
No 179
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=39.53 E-value=5.7 Score=25.20 Aligned_cols=47 Identities=15% Similarity=0.018 Sum_probs=22.3
Q ss_pred cHHHHHHhccc--CCCCCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHhhccc
Q 035320 13 RTKLMVLLSIL--LNQSTFDGNPLATAVAIASLNVIRD---EKLAERSRAFEGIH 62 (67)
Q Consensus 13 ~~~i~~~~~~~--~h~~Tf~Gnpla~AAala~l~~i~~---~~l~e~~~~~G~~L 62 (67)
++++++.+.+. .++.++..++...++..+. +++ +++.++..++.++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~l 280 (359)
T 1svv_A 229 NDALKPNARHLIKQRGALMAKGWLLGIQFEVL---MKDNLFFELGAHSNKMAAIL 280 (359)
T ss_dssp SGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHH---TSTTHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhcCCcccccchhhHHHHHHH---HhhhhHHHHHHHHHHHHHHH
Confidence 67766655432 2455665343333333232 333 34555555555543
No 180
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=38.99 E-value=51 Score=20.89 Aligned_cols=34 Identities=15% Similarity=-0.062 Sum_probs=21.2
Q ss_pred CCCCHHHHHHHHHHHHHHhh--hhHHHHHHHhhccc
Q 035320 29 FDGNPLATAVAIASLNVIRD--EKLAERSRAFEGIH 62 (67)
Q Consensus 29 f~Gnpla~AAala~l~~i~~--~~l~e~~~~~G~~L 62 (67)
+..|+.++++..++++.+++ +++.++..++.+++
T Consensus 233 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l 268 (382)
T 4eb5_A 233 GSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRI 268 (382)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34577788888888887654 34455555554443
No 181
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=37.77 E-value=22 Score=23.72 Aligned_cols=36 Identities=14% Similarity=-0.093 Sum_probs=16.3
Q ss_pred CCCCCCCHHHHHHHHHH-HHHHhhhhHHHHHHHhhcc
Q 035320 26 QSTFDGNPLATAVAIAS-LNVIRDEKLAERSRAFEGI 61 (67)
Q Consensus 26 ~~Tf~Gnpla~AAala~-l~~i~~~~l~e~~~~~G~~ 61 (67)
..++++.+..+.++++. ++...+++.+++..+++++
T Consensus 300 ~~~~~~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~ 336 (467)
T 2oqx_A 300 FPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQY 336 (467)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccccchhhhHHHHHHHhhHhhhhHHHHHHHHHHHHH
Confidence 35666666555444433 2322223344444444443
No 182
>2afr_A Cobalamin biosynthesis precorrin isomerase; 2.30A {Leptospira interrogans} PDB: 2afv_A*
Probab=37.31 E-value=32 Score=22.58 Aligned_cols=23 Identities=26% Similarity=0.244 Sum_probs=19.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH
Q 035320 24 LNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 24 ~h~~Tf~Gnpla~AAala~l~~i 46 (67)
..-++-||+|++.|+..|-+...
T Consensus 195 ~~~GrkGGS~vAaAivNALl~~~ 217 (231)
T 2afr_A 195 LTMGRKGGSTIAVAILHALLLLS 217 (231)
T ss_dssp EECSSCCCHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHH
Confidence 46689999999999988887554
No 183
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=36.83 E-value=85 Score=20.34 Aligned_cols=35 Identities=9% Similarity=0.061 Sum_probs=19.6
Q ss_pred CCCC-CCHHHHHHHHHHHHHHhhh----hHHHHHHHhhcc
Q 035320 27 STFD-GNPLATAVAIASLNVIRDE----KLAERSRAFEGI 61 (67)
Q Consensus 27 ~Tf~-Gnpla~AAala~l~~i~~~----~l~e~~~~~G~~ 61 (67)
.+++ -|+.+.+++.++++.+.++ ++.++.+++.++
T Consensus 270 ~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~ 309 (398)
T 2fyf_A 270 QTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQR 309 (398)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 4444 4566677777788776543 344444444443
No 184
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=34.89 E-value=49 Score=22.40 Aligned_cols=36 Identities=8% Similarity=-0.066 Sum_probs=25.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhh---hHHHHHHHhhccc
Q 035320 27 STFDGNPLATAVAIASLNVIRDE---KLAERSRAFEGIH 62 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~~~---~l~e~~~~~G~~L 62 (67)
.+...++..+++..++++.+++. ++.++..++.+++
T Consensus 242 ~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l 280 (446)
T 2x3l_A 242 QTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECL 280 (446)
T ss_dssp SCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 44556788887777777877652 2888888777765
No 185
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=34.68 E-value=30 Score=22.13 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=20.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHhhcc
Q 035320 26 QSTFDGNPLATAVAIASLNVIRDEKLAERSRAFEGI 61 (67)
Q Consensus 26 ~~Tf~Gnpla~AAala~l~~i~~~~l~e~~~~~G~~ 61 (67)
+.++..+++.++++++.++.++ ++.++.+++.++
T Consensus 227 ~~~~~~~~~~aa~~~~~~~~~~--~~~~~~~~~~~~ 260 (374)
T 3uwc_A 227 GINCRMDTIQAVIANRLMNQLE--TITEKRRGIAHL 260 (374)
T ss_dssp CCBCBCCHHHHHHHHHHGGGHH--HHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 4556678999988887765443 244444444443
No 186
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=34.54 E-value=44 Score=21.21 Aligned_cols=37 Identities=8% Similarity=-0.082 Sum_probs=21.3
Q ss_pred hccccHHHHHHhccc---CCCCCCCCCHHHHHHHHHHHHHH
Q 035320 9 YKNERTKLMVLLSIL---LNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 9 ~~~g~~~i~~~~~~~---~h~~Tf~Gnpla~AAala~l~~i 46 (67)
|.++++++++.+... ..++++..++.+ +++.+.++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~ 254 (357)
T 3lws_A 215 ILAGPAAFCQTARIWKRRYGGDLISLYPYI-VSADYYYELR 254 (357)
T ss_dssp EEEECHHHHHHHHHHHHHTTCCCSCCHHHH-HHHHHHHHHH
T ss_pred EEEcCHHHHHHHHHHHHHhcCCcccchHHH-HHHHHHHHHH
Confidence 456888888776432 233445555555 4455666653
No 187
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=32.91 E-value=61 Score=21.88 Aligned_cols=32 Identities=13% Similarity=0.209 Sum_probs=15.4
Q ss_pred cHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHh
Q 035320 13 RTKLMVLLSILLNQSTFDGNPLATAVAIASLNVIR 47 (67)
Q Consensus 13 ~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~i~ 47 (67)
++++.+.+.+...+.+ .++| ..+..+++..+.
T Consensus 313 ~~~~~~~l~~~~~g~~-~~~~--~~~~~aal~~l~ 344 (456)
T 2z67_A 313 DAEFIKEISLSYPGRA-SATP--VVNTLVSLLSMG 344 (456)
T ss_dssp CHHHHHHHHTTSCSCB-CSHH--HHHHHHHHHHHH
T ss_pred CHHHHhhcCcCCCCCC-CCCH--HHHHHHHHHHHH
Confidence 5677776655444332 2343 333444444443
No 188
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=32.25 E-value=35 Score=23.35 Aligned_cols=13 Identities=8% Similarity=0.128 Sum_probs=9.6
Q ss_pred hccccHHHHHHhc
Q 035320 9 YKNERTKLMVLLS 21 (67)
Q Consensus 9 ~~~g~~~i~~~~~ 21 (67)
|.++++++.+.+.
T Consensus 245 ~v~~~~~li~~l~ 257 (431)
T 3ht4_A 245 YIVGKEQYVEACA 257 (431)
T ss_dssp EEEECHHHHHHHH
T ss_pred EEEecHHHHHHHH
Confidence 4568999888764
No 189
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=31.24 E-value=47 Score=22.17 Aligned_cols=34 Identities=12% Similarity=0.149 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHHHHHHHh--hhhHHHHHHHhhccc
Q 035320 29 FDGNPLATAVAIASLNVIR--DEKLAERSRAFEGIH 62 (67)
Q Consensus 29 f~Gnpla~AAala~l~~i~--~~~l~e~~~~~G~~L 62 (67)
...+|+.|+++++.++.+. -++..++++.+.++|
T Consensus 270 ~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L 305 (421)
T 2ctz_A 270 QALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWL 305 (421)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHH
Confidence 3679999999998888763 233445555555544
No 190
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=31.13 E-value=39 Score=21.79 Aligned_cols=21 Identities=24% Similarity=0.229 Sum_probs=14.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHh
Q 035320 27 STFDGNPLATAVAIASLNVIR 47 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~ 47 (67)
.++..+++.++++.+.++.++
T Consensus 233 ~~~~~~~~~~a~~~~~~~~l~ 253 (388)
T 1b9h_A 233 SNMRLNEFSASVLRAQLARLD 253 (388)
T ss_dssp CBCBCBHHHHHHHHHHHTTHH
T ss_pred ccCCcCHHHHHHHHHHHHHHH
Confidence 344578898888877776554
No 191
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=28.23 E-value=56 Score=19.22 Aligned_cols=18 Identities=28% Similarity=0.427 Sum_probs=16.0
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 035320 29 FDGNPLATAVAIASLNVI 46 (67)
Q Consensus 29 f~Gnpla~AAala~l~~i 46 (67)
|+-||-++.+++.+++.+
T Consensus 43 yaHnP~si~a~l~al~~~ 60 (163)
T 3mvn_A 43 FAHHPTAITATIDALRAK 60 (163)
T ss_dssp CCCSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHh
Confidence 788999999999999854
No 192
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=27.12 E-value=21 Score=23.35 Aligned_cols=32 Identities=3% Similarity=-0.209 Sum_probs=21.6
Q ss_pred cHHHHHHhcccC----CCCCCCCCHHHHHHHHHHHH
Q 035320 13 RTKLMVLLSILL----NQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 13 ~~~i~~~~~~~~----h~~Tf~Gnpla~AAala~l~ 44 (67)
++++.+.+.... .+.++..++++.+++.+.|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 315 (418)
T 3rq1_A 280 DEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVA 315 (418)
T ss_dssp SHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhC
Confidence 888888775431 22334688888888887774
No 193
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=26.65 E-value=55 Score=20.56 Aligned_cols=37 Identities=8% Similarity=0.006 Sum_probs=23.8
Q ss_pred ccccHHHHHHhcc--cCCCCCCCCCHHHHHHHHHHHHHH
Q 035320 10 KNERTKLMVLLSI--LLNQSTFDGNPLATAVAIASLNVI 46 (67)
Q Consensus 10 ~~g~~~i~~~~~~--~~h~~Tf~Gnpla~AAala~l~~i 46 (67)
..+++++.+.+.. ..+++++..+++.++++.+.++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 251 (347)
T 1jg8_A 213 VVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKM 251 (347)
T ss_dssp EEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHS
T ss_pred EEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH
Confidence 4467877765532 123456667788888888887653
No 194
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=26.04 E-value=47 Score=21.84 Aligned_cols=37 Identities=8% Similarity=0.006 Sum_probs=24.9
Q ss_pred hccc-cHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHH
Q 035320 9 YKNE-RTKLMVLLSILLNQSTFDGNPLATAVAIASLNV 45 (67)
Q Consensus 9 ~~~g-~~~i~~~~~~~~h~~Tf~Gnpla~AAala~l~~ 45 (67)
|..+ ++++.+.+.......+++.++++..++.+.|+.
T Consensus 228 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 265 (391)
T 3bwn_A 228 WALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNV 265 (391)
T ss_dssp EEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred EEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhC
Confidence 4444 788888776543334567788888888777764
No 195
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=25.70 E-value=64 Score=21.31 Aligned_cols=19 Identities=11% Similarity=0.260 Sum_probs=14.9
Q ss_pred CCCCHHHHHHHHHHHHHHh
Q 035320 29 FDGNPLATAVAIASLNVIR 47 (67)
Q Consensus 29 f~Gnpla~AAala~l~~i~ 47 (67)
+..+|.+++.+.+.++.+.
T Consensus 262 ~~~~~~~a~~~~~~l~~l~ 280 (412)
T 2cb1_A 262 MALSPFNAYLLFQGLETVA 280 (412)
T ss_dssp CCCCHHHHHHHHHHGGGHH
T ss_pred CCCChHHhHHHHcCCchHH
Confidence 3668999999888887663
No 196
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=24.82 E-value=20 Score=23.42 Aligned_cols=32 Identities=13% Similarity=0.085 Sum_probs=21.9
Q ss_pred cHHHHHHhcccC----CCCCCCCCHHHHHHHHHHHH
Q 035320 13 RTKLMVLLSILL----NQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 13 ~~~i~~~~~~~~----h~~Tf~Gnpla~AAala~l~ 44 (67)
++++.+.+.... .+.++..++++.+++.+.++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 314 (413)
T 3t18_A 279 SKEIIEEFEASLAHSARCNWSNGTHAAQNILIELER 314 (413)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhc
Confidence 889888775432 22334588898888887764
No 197
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=24.51 E-value=54 Score=22.12 Aligned_cols=26 Identities=4% Similarity=-0.082 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHhhh---hHHHHHHHhhcc
Q 035320 36 TAVAIASLNVIRDE---KLAERSRAFEGI 61 (67)
Q Consensus 36 ~AAala~l~~i~~~---~l~e~~~~~G~~ 61 (67)
.++..++++.+.++ ++.++..+..++
T Consensus 328 ~~a~~aal~~l~~~~~~~~~~~~~~~~~~ 356 (497)
T 3mc6_A 328 VVGCWATMVNMGENGYIESCQEIVGAAMK 356 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 33444455555443 344444444443
No 198
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=22.58 E-value=1.1e+02 Score=22.85 Aligned_cols=36 Identities=11% Similarity=-0.026 Sum_probs=26.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHhhccc
Q 035320 27 STFDGNPLATAVAIASLNVIRD---EKLAERSRAFEGIH 62 (67)
Q Consensus 27 ~Tf~Gnpla~AAala~l~~i~~---~~l~e~~~~~G~~L 62 (67)
.|-+-++..+|+..++++.+++ +++.+++.+..++|
T Consensus 397 ~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~ 435 (715)
T 3n75_A 397 TTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKF 435 (715)
T ss_dssp SCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 4556889999999999988863 45666666665554
No 199
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=22.14 E-value=45 Score=22.41 Aligned_cols=30 Identities=0% Similarity=-0.020 Sum_probs=17.6
Q ss_pred HHHHHhcccCCCCCCCCCHHHHHHHHHHHH
Q 035320 15 KLMVLLSILLNQSTFDGNPLATAVAIASLN 44 (67)
Q Consensus 15 ~i~~~~~~~~h~~Tf~Gnpla~AAala~l~ 44 (67)
++.+.+......++.+.++++.+++.+.|+
T Consensus 309 ~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 338 (448)
T 3meb_A 309 AMVSGMTLQIRKTWSMSAIHGAYIVQVIVH 338 (448)
T ss_dssp HHHHHHHHHHHTTTSSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccCCccHHHHHHHHHHhc
Confidence 555554433344555667777777776653
No 200
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=21.54 E-value=1.3e+02 Score=19.65 Aligned_cols=22 Identities=18% Similarity=0.154 Sum_probs=16.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh
Q 035320 26 QSTFDGNPLATAVAIASLNVIR 47 (67)
Q Consensus 26 ~~Tf~Gnpla~AAala~l~~i~ 47 (67)
+..+.-+++.+|.+++.++.+.
T Consensus 230 g~~~~~~~~~aa~~~~~l~~l~ 251 (377)
T 3ju7_A 230 GFNCKMSEYAAAIGIATMKKWD 251 (377)
T ss_dssp CCBCCCCHHHHHHHHHHHHTHH
T ss_pred cccCCCCHHHHHHHHHHHHHHH
Confidence 3456678999998888876553
Done!