BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035333
MTGEEMASGPAGTKVLRFLYFVGAGFICTAAINKWRELERKSLQKKQQESDLLTDDNSAT
AVQKVVK

High Scoring Gene Products

Symbol, full name Information P value
AT1G16916 protein from Arabidopsis thaliana 2.4e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035333
        (67 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4515102540 - symbol:AT1G16916 "AT1G16916" spec...   165  2.4e-12   1


>TAIR|locus:4515102540 [details] [associations]
            symbol:AT1G16916 "AT1G16916" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC026237
            IPI:IPI00891696 RefSeq:NP_001117299.1 UniGene:At.47889
            EnsemblPlants:AT1G16916.1 GeneID:6241479 KEGG:ath:AT1G16916
            TAIR:At1g16916 eggNOG:NOG264945 HOGENOM:HOG000005772 OMA:AINKWRE
            PhylomeDB:B3H6R5 ProtClustDB:CLSN2708434 Genevestigator:B3H6R5
            Uniprot:B3H6R5
        Length = 65

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 34/64 (53%), Positives = 43/64 (67%)

Query:     6 MASGPAGTKVLRFLYFVGAGFICTAAINKWRELERKSLQKKQQESDLLTDDN--SATAVQ 63
             M  GP   K+LR +YFVGAGF+CT AINKWRE+ER SL K++QE +   D       +VQ
Sbjct:     2 MEEGPPAPKMLRMVYFVGAGFLCTFAINKWREMERNSLLKQEQEKNQQGDVGLLPRDSVQ 61

Query:    64 KVVK 67
             K +K
Sbjct:    62 KAMK 65


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.129   0.360    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       67        67   0.00091  102 3  11 22  0.44    28
                                                     29  0.49    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  492 (52 KB)
  Total size of DFA:  86 KB (2065 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.71u 0.21s 9.92t   Elapsed:  00:00:01
  Total cpu time:  9.71u 0.21s 9.92t   Elapsed:  00:00:01
  Start:  Fri May 10 07:37:44 2013   End:  Fri May 10 07:37:45 2013

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