BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035333
         (67 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224114776|ref|XP_002316854.1| predicted protein [Populus trichocarpa]
 gi|222859919|gb|EEE97466.1| predicted protein [Populus trichocarpa]
          Length = 71

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 4/71 (5%)

Query: 1  MTGEEMASGPAGTKVLRFLYFVGAGFICTAAINKWRELERKS-LQKKQQESDLLTD---D 56
          MT EE A+GPAG KVLR LYFVGAGFICT  INKWRE+ERKS L+++QQE  + +D    
Sbjct: 1  MTIEEAAAGPAGPKVLRLLYFVGAGFICTVGINKWREIERKSILEQQQQEKKMKSDFLPR 60

Query: 57 NSATAVQKVVK 67
          +S  +VQK +K
Sbjct: 61 SSTNSVQKAIK 71


>gi|359493770|ref|XP_003634663.1| PREDICTED: uncharacterized protein LOC100854863 [Vitis vinifera]
 gi|302142887|emb|CBI20182.3| unnamed protein product [Vitis vinifera]
          Length = 58

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 5/55 (9%)

Query: 1  MTGEEMASGPAGTKVLRFLYFVGAGFICTAAINKWRELERKSLQKKQQESDLLTD 55
          M GEE   GPAG KVLR LYFVGAGFICTAAINKWR+L+RKS    QQ +D L +
Sbjct: 1  MIGEE--GGPAGPKVLRMLYFVGAGFICTAAINKWRDLQRKS---AQQHADQLPE 50


>gi|356544098|ref|XP_003540492.1| PREDICTED: uncharacterized protein LOC100808624 [Glycine max]
          Length = 65

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 2/67 (2%)

Query: 1  MTGEEMASGPAGTKVLRFLYFVGAGFICTAAINKWRELERKSLQKKQQESDLLTDDNSAT 60
          MTGEE+ SGPAG K+LR + FVGA  ICTAAINK+RE ER ++ K+QQ  +   + + + 
Sbjct: 1  MTGEEI-SGPAGPKLLRLVSFVGAAVICTAAINKYREYERNTIIKQQQVVE-TRNSSESV 58

Query: 61 AVQKVVK 67
          AV K +K
Sbjct: 59 AVHKTLK 65


>gi|297850096|ref|XP_002892929.1| hypothetical protein ARALYDRAFT_312664 [Arabidopsis lyrata subsp.
          lyrata]
 gi|297338771|gb|EFH69188.1| hypothetical protein ARALYDRAFT_312664 [Arabidopsis lyrata subsp.
          lyrata]
          Length = 69

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 6/68 (8%)

Query: 6  MASGPAGTKVLRFLYFVGAGFICTAAINKWRELERKSLQKKQQESD------LLTDDNSA 59
          M  GP   K+LR +YFVGAGF+CT AINKWRE+ER SL K++QE +       L      
Sbjct: 2  MEEGPPAPKMLRMVYFVGAGFLCTFAINKWREMERNSLLKQEQEKNQQHGDAALLHQTPP 61

Query: 60 TAVQKVVK 67
           ++ K +K
Sbjct: 62 NSIHKAMK 69


>gi|186478567|ref|NP_001117299.1| uncharacterized protein [Arabidopsis thaliana]
 gi|332191400|gb|AEE29521.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 65

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 10/68 (14%)

Query: 6  MASGPAGTKVLRFLYFVGAGFICTAAINKWRELERKSLQKKQQESD------LLTDDNSA 59
          M  GP   K+LR +YFVGAGF+CT AINKWRE+ER SL K++QE +      LL  D   
Sbjct: 2  MEEGPPAPKMLRMVYFVGAGFLCTFAINKWREMERNSLLKQEQEKNQQGDVGLLPRD--- 58

Query: 60 TAVQKVVK 67
           +VQK +K
Sbjct: 59 -SVQKAMK 65


>gi|356549653|ref|XP_003543206.1| PREDICTED: uncharacterized protein LOC100801381 [Glycine max]
          Length = 67

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 51/68 (75%), Gaps = 2/68 (2%)

Query: 1  MTGEEMASGPAGTKVLRFLYFVGAGFICTAAINKWRELERKSLQKKQQESDLLTDDNS-A 59
          MTGEE+ SGPAG K+LR + FVGA  ICTAAINK+RE ER ++ K+QQ+  + T ++S +
Sbjct: 1  MTGEEI-SGPAGPKLLRLVSFVGAAVICTAAINKYREYERNTIIKQQQQQVVETHNSSES 59

Query: 60 TAVQKVVK 67
           AV K +K
Sbjct: 60 VAVPKTLK 67


>gi|242056021|ref|XP_002457156.1| hypothetical protein SORBIDRAFT_03g002350 [Sorghum bicolor]
 gi|241929131|gb|EES02276.1| hypothetical protein SORBIDRAFT_03g002350 [Sorghum bicolor]
          Length = 69

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 28/35 (80%)

Query: 7  ASGPAGTKVLRFLYFVGAGFICTAAINKWRELERK 41
          A+G A +K+LRF+YFVGAG ICT AIN +R+ E K
Sbjct: 3  AAGEASSKLLRFMYFVGAGVICTKAINTYRDYEHK 37


>gi|297719727|ref|NP_001172225.1| Os01g0206600 [Oryza sativa Japonica Group]
 gi|56201499|dbj|BAD72996.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|56201735|dbj|BAD73092.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|125524846|gb|EAY72960.1| hypothetical protein OsI_00832 [Oryza sativa Indica Group]
 gi|125569456|gb|EAZ10971.1| hypothetical protein OsJ_00814 [Oryza sativa Japonica Group]
 gi|215768684|dbj|BAH00913.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255672986|dbj|BAH90955.1| Os01g0206600 [Oryza sativa Japonica Group]
          Length = 65

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 27/34 (79%)

Query: 8  SGPAGTKVLRFLYFVGAGFICTAAINKWRELERK 41
          +G A +K+LRFL FVGAG ICT AIN +R+ ERK
Sbjct: 5  AGEASSKLLRFLCFVGAGVICTKAINTYRDYERK 38


>gi|238012768|gb|ACR37419.1| unknown [Zea mays]
 gi|413947716|gb|AFW80365.1| hypothetical protein ZEAMMB73_486504 [Zea mays]
          Length = 68

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 6  MAS-GPAGTKVLRFLYFVGAGFICTAAINKWRELERK 41
          MAS G A + +LRFLYFVGAG ICT AIN +R+ E K
Sbjct: 1  MASAGEAPSTLLRFLYFVGAGVICTKAINTYRDYEHK 37


>gi|226496505|ref|NP_001143898.1| uncharacterized protein LOC100276701 [Zea mays]
 gi|195629314|gb|ACG36298.1| hypothetical protein [Zea mays]
          Length = 97

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 6  MAS-GPAGTKVLRFLYFVGAGFICTAAINKWRELERK 41
          MAS G A + +LRFLYFVGAG ICT AIN +R+ E K
Sbjct: 1  MASAGEAPSTLLRFLYFVGAGVICTKAINTYRDYEHK 37


>gi|87241081|gb|ABD32939.1| hypothetical protein MtrDRAFT_AC151598g7v2 [Medicago truncatula]
          Length = 72

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 31/43 (72%), Gaps = 1/43 (2%)

Query: 1  MTGEEMASGPAGTKVLRFLYFVGAGFICTAAINKWRELERKSL 43
          MTGEE  SGP G K++R +YFVGA    T AINKWRE E KS+
Sbjct: 1  MTGEEY-SGPPGPKLMRLVYFVGAAVAVTVAINKWREFESKSI 42


>gi|357452113|ref|XP_003596333.1| hypothetical protein MTR_2g076020 [Medicago truncatula]
 gi|355485381|gb|AES66584.1| hypothetical protein MTR_2g076020 [Medicago truncatula]
          Length = 89

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 31/43 (72%), Gaps = 1/43 (2%)

Query: 1  MTGEEMASGPAGTKVLRFLYFVGAGFICTAAINKWRELERKSL 43
          MTGEE  SGP G K++R +YFVGA    T AINKWRE E KS+
Sbjct: 1  MTGEEY-SGPPGPKLMRLVYFVGAAVAVTVAINKWREFESKSI 42


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.129    0.360 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 955,675,707
Number of Sequences: 23463169
Number of extensions: 27194003
Number of successful extensions: 74896
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74884
Number of HSP's gapped (non-prelim): 12
length of query: 67
length of database: 8,064,228,071
effective HSP length: 39
effective length of query: 28
effective length of database: 7,149,164,480
effective search space: 200176605440
effective search space used: 200176605440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)