Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>035343
MMLVCSDTGRKVDDPEVLEAIRLIVINNLLQYHPESSSQLAMGVTFGVDPPKQQVFAFWS
YFNFSDY

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035343
        (67 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2015616 - symbol:ACR11 "ACT domain repeats 11"...   192  3.3e-15   1
TAIR|locus:2175458 - symbol:ACR12 "ACT domain repeats 12"...   180  1.1e-13   1


>TAIR|locus:2015616 [details] [associations]
            symbol:ACR11 "ACT domain repeats 11" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0009409 "response to cold"
            evidence=IEP;RCA] [GO:0010319 "stromule" evidence=IDA] [GO:0009416
            "response to light stimulus" evidence=IEP] [GO:0009744 "response to
            sucrose stimulus" evidence=IEP] [GO:0006833 "water transport"
            evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
            [GO:0009750 "response to fructose stimulus" evidence=RCA]
            [GO:0019684 "photosynthesis, light reaction" evidence=RCA]
            [GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0042742
            "defense response to bacterium" evidence=RCA] [GO:0070838 "divalent
            metal ion transport" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0009409 GO:GO:0009744
            GO:GO:0009941 GO:GO:0009416 GO:GO:0009535 EMBL:AC051629
            GO:GO:0010319 GO:GO:0016779 UniGene:At.19280 EMBL:AF386988
            EMBL:BT006317 EMBL:JF797176 IPI:IPI00517825 PIR:B86304
            RefSeq:NP_564010.1 UniGene:At.16052 UniGene:At.24697
            ProteinModelPortal:Q9FZ47 SMR:Q9FZ47 STRING:Q9FZ47 PaxDb:Q9FZ47
            PRIDE:Q9FZ47 ProMEX:Q9FZ47 EnsemblPlants:AT1G16880.1 GeneID:838259
            KEGG:ath:AT1G16880 TAIR:At1g16880 eggNOG:NOG288292
            HOGENOM:HOG000243969 InParanoid:Q9FZ47 OMA:SQLAMGA PhylomeDB:Q9FZ47
            ProtClustDB:CLSN2687834 Genevestigator:Q9FZ47 Uniprot:Q9FZ47
        Length = 290

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 36/50 (72%), Positives = 44/50 (88%)

Query:     6 SDTGRKVDDPEVLEAIRLIVINNLLQYHPESSSQLAMGVTFGVDPPKQQV 55
             +D+GRKV+DPE+LEAIRL VINNLL++HPESSSQLAMG  FGV PP + +
Sbjct:   145 ADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPI 194


>TAIR|locus:2175458 [details] [associations]
            symbol:ACR12 "ACT domain repeats 12" species:3702
            "Arabidopsis thaliana" [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0016597 "amino acid binding" evidence=IEA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0019408 "dolichol
            biosynthetic process" evidence=RCA] InterPro:IPR002912 Pfam:PF01842
            EMBL:CP002688 GO:GO:0009570 GO:GO:0016597 GO:GO:0008152
            GO:GO:0009535 EMBL:AL162972 EMBL:AB008271 EMBL:AY072401
            EMBL:AY114702 EMBL:JF797177 IPI:IPI00527532 PIR:T48470
            RefSeq:NP_196094.1 UniGene:At.22197 ProteinModelPortal:Q9LZ23
            IntAct:Q9LZ23 PRIDE:Q9LZ23 EnsemblPlants:AT5G04740.1 GeneID:830352
            KEGG:ath:AT5G04740 TAIR:At5g04740 InParanoid:Q9LZ23 OMA:ATHIHVK
            PhylomeDB:Q9LZ23 ProtClustDB:CLSN2916259 ArrayExpress:Q9LZ23
            Genevestigator:Q9LZ23 Uniprot:Q9LZ23
        Length = 301

 Score = 180 (68.4 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 32/49 (65%), Positives = 42/49 (85%)

Query:     7 DTGRKVDDPEVLEAIRLIVINNLLQYHPESSSQLAMGVTFGVDPPKQQV 55
             DTGRKV+DP++LE IRL +INNLL+YHPE S QLAMG TFG+  P++++
Sbjct:   157 DTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKI 205


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       67        67   0.00091  102 3  11 22  0.41    28
                                                     29  0.49    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  505 (54 KB)
  Total size of DFA:  95 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.97u 0.20s 8.17t   Elapsed:  00:00:00
  Total cpu time:  7.97u 0.20s 8.17t   Elapsed:  00:00:00
  Start:  Fri May 10 07:43:46 2013   End:  Fri May 10 07:43:46 2013

Back to top