BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035343
         (67 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q0J709|UP12_ORYSJ Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza
           sativa subsp. japonica GN=Os08g0242700 PE=2 SV=2
          Length = 283

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/48 (64%), Positives = 42/48 (87%)

Query: 8   TGRKVDDPEVLEAIRLIVINNLLQYHPESSSQLAMGVTFGVDPPKQQV 55
           TGRK+ +PE+LEA+RL +INN++QYHPE+SSQLA+G TFG +PP + V
Sbjct: 140 TGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELV 187


>sp|P83643|UP12_ORYSI Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza
           sativa subsp. indica GN=OsI_027381 PE=1 SV=2
          Length = 283

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/48 (64%), Positives = 42/48 (87%)

Query: 8   TGRKVDDPEVLEAIRLIVINNLLQYHPESSSQLAMGVTFGVDPPKQQV 55
           TGRK+ +PE+LEA+RL +INN++QYHPE+SSQLA+G TFG +PP + V
Sbjct: 140 TGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELV 187


>sp|O60135|LCF1_SCHPO Long-chain-fatty-acid--CoA ligase 1 OS=Schizosaccharomyces pombe
          (strain 972 / ATCC 24843) GN=lcf1 PE=3 SV=1
          Length = 676

 Score = 30.4 bits (67), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)

Query: 28 NLLQYHPESSSQLAMGVTFGVDPPKQQVFAFWSYFNFSDY 67
          NL++ H E+       VT  VD  K++V   WSYF  SDY
Sbjct: 60 NLVKEHVETKM-----VTKVVDGEKKEVPKSWSYFELSDY 94


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.138    0.422 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,119,789
Number of Sequences: 539616
Number of extensions: 738540
Number of successful extensions: 2018
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2016
Number of HSP's gapped (non-prelim): 3
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)