BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035344
         (67 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LUV2|POP3_ARATH Probable protein Pop3 OS=Arabidopsis thaliana GN=At3g17210 PE=1
           SV=1
          Length = 109

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 48/62 (77%), Positives = 57/62 (91%)

Query: 6   GKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPTTV 65
           GK+VSIENLHQG+THIFESTFES E VAEY+AHPAHVE+A +FL +L+KVLVIDYKPT+V
Sbjct: 48  GKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSV 107

Query: 66  RV 67
            +
Sbjct: 108 SL 109


>sp|I6WU39|OLIAC_CANSA Olivetolic acid cyclase OS=Cannabis sativa GN=OAC PE=1 SV=1
          Length = 101

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 41/57 (71%)

Query: 6  GKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKP 62
          GK+V+ +N  +G+THI E TFES E + +Y+ HPAHV + +++ +  EK+L+ DY P
Sbjct: 43 GKDVTQKNKEEGYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDYTP 99


>sp|Q9FK81|Y5258_ARATH Uncharacterized protein At5g22580 OS=Arabidopsis thaliana
           GN=At5g22580 PE=1 SV=1
          Length = 111

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 36/55 (65%)

Query: 12  ENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPTTVR 66
           + L QGFTH F  TFE+ +G   + +HP HVE++  F A ++K++++D+    V+
Sbjct: 50  DMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVK 104


>sp|P84986|STBP1_POPEU Stable protein 1 (Fragments) OS=Populus euphratica PE=1 SV=1
          Length = 56

 Score = 38.1 bits (87), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 54
          G+TH FESTFES  G+ EY+   A   +A  FL  L +
Sbjct: 1  GYTHAFESTFESKSGLQEYLDSAALAAFAEGFLPTLSQ 38


>sp|A1KBD3|LEU1_AZOSB 2-isopropylmalate synthase OS=Azoarcus sp. (strain BH72) GN=leuA
           PE=3 SV=1
          Length = 572

 Score = 30.4 bits (67), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 8   NVSIENLHQGFTHIFESTFESTEGVAEYVAH 38
           +V+IE L Q   H+ E TFES  G    + H
Sbjct: 104 DVTIEVLTQARPHLIERTFESVRGAKRAIVH 134


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.134    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,749,683
Number of Sequences: 539616
Number of extensions: 765385
Number of successful extensions: 1850
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1844
Number of HSP's gapped (non-prelim): 6
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)