Query 035344
Match_columns 67
No_of_seqs 132 out of 759
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 18:20:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035344.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035344hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q4r_A Protein AT3G17210; cent 99.9 1.7E-23 5.9E-28 123.9 7.9 66 2-67 47-112 (112)
2 1rjj_A Expressed protein; beta 99.9 9.1E-23 3.1E-27 120.5 7.5 65 2-66 39-104 (111)
3 1tr0_A Stable protein 1; plant 99.9 3.5E-22 1.2E-26 117.4 8.3 61 2-62 45-107 (108)
4 2qyc_A Ferredoxin-like protein 99.9 8.6E-22 2.9E-26 114.9 7.7 62 2-65 41-102 (103)
5 3bn7_A Ferredoxin-like protein 99.9 2.1E-21 7.3E-26 116.7 8.1 61 2-62 56-119 (120)
6 3bb5_A Stress responsive alpha 99.9 2.2E-21 7.4E-26 116.7 8.0 61 2-62 57-121 (121)
7 3bgu_A Ferredoxin-like protein 99.8 2E-20 6.9E-25 111.8 6.5 59 2-62 58-116 (116)
8 3fmb_A Dimeric protein of unkn 99.8 2.4E-20 8.1E-25 111.9 6.3 58 2-62 61-118 (118)
9 3bde_A MLL5499 protein; stress 99.8 3.6E-19 1.2E-23 107.1 7.1 59 2-63 57-116 (120)
10 3lo3_A Uncharacterized conserv 95.7 0.016 5.6E-07 32.6 4.1 42 17-58 51-93 (94)
11 3kkf_A Putative antibiotic bio 95.6 0.071 2.4E-06 29.8 6.5 48 16-63 51-98 (105)
12 2pd1_A Hypothetical protein; u 95.3 0.12 4.1E-06 28.4 6.8 37 18-54 50-86 (104)
13 2fb0_A Conserved hypothetical 95.1 0.12 4.2E-06 27.8 6.2 38 18-55 51-88 (94)
14 2fiu_A Conserved hypothetical 94.9 0.11 3.8E-06 29.4 5.9 39 20-58 55-94 (99)
15 2gff_A LSRG protein; dimeric a 94.6 0.14 4.7E-06 28.4 5.8 38 17-54 47-84 (106)
16 3hhl_A RPA0582; alpha-beta-bar 94.6 0.12 3.9E-06 31.3 5.7 38 17-54 86-123 (143)
17 3gz7_A Putative antibiotic bio 94.4 0.13 4.6E-06 29.6 5.6 38 18-55 67-105 (115)
18 3bm7_A Protein of unknown func 94.4 0.22 7.4E-06 28.3 6.4 41 18-58 68-108 (115)
19 1iuj_A Hypothetical protein TT 94.3 0.061 2.1E-06 29.5 3.9 36 18-53 48-87 (106)
20 1x7v_A PA3566 protein, APC5058 94.2 0.15 5.2E-06 27.6 5.3 43 18-60 53-95 (99)
21 3kg0_A Snoab; polyketide, anth 94.2 0.19 6.3E-06 29.6 6.0 37 17-53 68-104 (128)
22 2bbe_A Hypothetical protein SO 94.2 0.22 7.5E-06 27.7 6.1 39 17-55 59-98 (108)
23 2omo_A DUF176; structural geno 94.0 0.2 6.7E-06 29.0 5.8 38 17-54 69-106 (124)
24 1y0h_A Hypothetical protein RV 94.0 0.091 3.1E-06 28.7 4.1 37 18-54 51-87 (102)
25 4dpo_A Conserved protein; stru 93.9 0.2 6.8E-06 28.8 5.6 38 17-54 71-108 (119)
26 1tuv_A Protein YGIN; menadione 93.7 0.37 1.3E-05 27.3 6.5 42 16-57 56-97 (114)
27 4dn9_A Antibiotic biosynthesis 93.3 0.37 1.3E-05 27.9 6.1 45 17-61 66-111 (122)
28 3e8o_A Uncharacterized protein 93.2 0.34 1.2E-05 27.6 5.8 37 17-53 65-101 (119)
29 4hl9_A Antibiotic biosynthesis 93.0 0.38 1.3E-05 27.8 5.8 44 17-60 69-112 (118)
30 2ftr_A BH0200; structural geno 91.5 1 3.5E-05 25.4 6.3 40 15-54 57-96 (108)
31 1q8b_A Protein YJCS; structura 91.5 0.27 9.2E-06 27.3 3.8 39 17-55 60-98 (105)
32 3hf5_A 4-methylmuconolactone m 91.2 0.76 2.6E-05 26.7 5.7 40 17-56 69-108 (116)
33 2zdo_A Heme-degrading monooxyg 91.1 0.34 1.2E-05 27.0 3.9 31 18-48 52-82 (109)
34 3f44_A Putative monooxygenase; 90.5 0.93 3.2E-05 28.6 6.0 47 17-63 163-209 (220)
35 1sqe_A Hypothetical protein PG 90.1 0.47 1.6E-05 26.3 3.9 31 18-48 50-80 (109)
36 3tvz_A Putative uncharacterize 89.5 0.35 1.2E-05 29.8 3.3 31 19-49 118-148 (172)
37 1lq9_A Actva-ORF6 monooxygenas 86.3 1.6 5.6E-05 24.8 4.7 43 17-59 56-102 (112)
38 3fj2_A Monooxygenase-like prot 86.1 1.6 5.6E-05 27.3 4.9 35 17-51 130-164 (186)
39 3bf4_A Ethyl TERT-butyl ether 85.5 3 0.0001 24.5 5.6 41 13-54 71-111 (127)
40 1tz0_A Hypothetical protein; s 84.4 0.6 2.1E-05 26.6 2.1 30 18-47 55-84 (114)
41 3hx9_A Protein RV3592; DI-heme 84.3 0.63 2.1E-05 27.2 2.2 43 19-61 50-93 (124)
42 3fgv_A Uncharacterized protein 82.3 0.87 3E-05 25.9 2.2 36 24-59 66-101 (106)
43 2go8_A Hypothetical protein YQ 80.0 1 3.5E-05 26.5 2.1 35 19-53 58-93 (122)
44 3mcs_A Putative monooxygenase; 76.7 12 0.0004 23.7 6.7 47 17-63 159-205 (219)
45 3f44_A Putative monooxygenase; 73.9 14 0.00047 23.1 6.6 48 16-63 52-99 (220)
46 2cvi_A 75AA long hypothetical 70.9 5.1 0.00017 21.0 3.2 24 14-37 34-57 (83)
47 2zbc_A 83AA long hypothetical 66.4 6 0.0002 20.3 2.9 23 14-36 34-56 (83)
48 2djw_A Probable transcriptiona 61.0 8.5 0.00029 20.4 2.9 24 14-37 34-57 (92)
49 3a16_A Oxdre, aldoxime dehydra 56.6 17 0.00058 25.2 4.3 26 24-49 301-328 (373)
50 1iap_A Guanine nucleotide exch 53.1 8.5 0.00029 24.8 2.2 24 26-52 5-29 (211)
51 3mcs_A Putative monooxygenase; 51.4 42 0.0015 21.0 5.7 41 16-56 52-92 (219)
52 3cx8_B RHO guanine nucleotide 48.0 9.7 0.00033 24.4 1.9 23 26-51 23-46 (203)
53 3ab3_B RHO guanine nucleotide 46.3 9.7 0.00033 25.1 1.7 26 24-52 57-83 (246)
54 4ae5_A Signal transduction pro 43.6 24 0.00083 21.5 3.2 26 18-43 112-137 (167)
55 2p5v_A Transcriptional regulat 42.8 25 0.00086 20.4 3.1 23 14-36 104-126 (162)
56 2cyy_A Putative HTH-type trans 42.5 27 0.00093 20.0 3.2 23 14-36 99-121 (151)
57 2ril_A Antibiotic biosynthesis 41.9 34 0.0012 18.1 3.4 23 16-38 52-74 (99)
58 3i4p_A Transcriptional regulat 41.6 29 0.00099 20.3 3.3 23 14-36 98-120 (162)
59 2cg4_A Regulatory protein ASNC 41.2 29 0.00098 19.8 3.2 23 14-36 101-123 (152)
60 2pn6_A ST1022, 150AA long hypo 38.3 36 0.0012 19.2 3.3 22 15-36 98-119 (150)
61 2dbb_A Putative HTH-type trans 36.9 29 0.001 19.7 2.7 22 15-36 102-124 (151)
62 1i1g_A Transcriptional regulat 36.5 39 0.0013 18.8 3.2 23 14-36 96-118 (141)
63 2cfx_A HTH-type transcriptiona 34.7 32 0.0011 19.5 2.6 22 15-36 98-119 (144)
64 2e1c_A Putative HTH-type trans 34.4 42 0.0014 19.9 3.2 23 14-36 119-141 (171)
65 3fr7_A Putative ketol-acid red 31.5 18 0.0006 26.3 1.3 26 28-53 480-507 (525)
66 2w25_A Probable transcriptiona 31.2 50 0.0017 18.7 3.1 22 15-36 101-122 (150)
67 2jdj_A HAPK, REDY-like protein 29.4 83 0.0028 18.0 6.3 38 16-53 51-88 (105)
68 1xhj_A Nitrogen fixation prote 26.0 67 0.0023 17.6 2.8 25 43-67 14-42 (88)
69 3gn6_A CT0912, orfan protein w 25.3 1E+02 0.0036 20.7 4.1 38 14-54 110-147 (321)
70 1k8v_A Neuropeptide F; moniezi 21.8 21 0.00071 17.1 0.1 14 24-37 12-25 (40)
No 1
>1q4r_A Protein AT3G17210; center for eukaryotic structural genom structural genomics, protein structure initiative, CESG, UN function; 1.90A {Arabidopsis thaliana} SCOP: d.58.4.4 PDB: 1q53_A 2q3p_A
Probab=99.90 E-value=1.7e-23 Score=123.95 Aligned_cols=66 Identities=73% Similarity=1.157 Sum_probs=63.0
Q ss_pred eeeecccCCccccCCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeecceeeC
Q 035344 2 CCNRGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPTTVRV 67 (67)
Q Consensus 2 ~~~~G~n~s~e~~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~~~~~~ 67 (67)
.+++|+|.+++++++|||++|+++|+|.|||++|+.||+|+++++.++|++++++++||+.+++|.
T Consensus 47 ~~~~G~~~~~~~~~~~~d~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~D~~~~~~~~ 112 (112)
T 1q4r_A 47 AFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSVSL 112 (112)
T ss_dssp EEEEEECCCSSSCSTTCCEEEEEEESCHHHHHHHHHSHHHHHHHHHHHHTEEEEEEEEECCCCSCC
T ss_pred EEEEccCCCccccCCCccEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHhcCcEEEeeecccccC
Confidence 589999999888899999999999999999999999999999999999999999999999998874
No 2
>1rjj_A Expressed protein; beta barrel, homodimer, structural genomics, protein structure initiative, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: d.58.4.4
Probab=99.88 E-value=9.1e-23 Score=120.53 Aligned_cols=65 Identities=35% Similarity=0.714 Sum_probs=61.9
Q ss_pred eeeecccC-CccccCCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeecceee
Q 035344 2 CCNRGKNV-SIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPTTVR 66 (67)
Q Consensus 2 ~~~~G~n~-s~e~~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~~~~~ 66 (67)
.+++|+|. +++++++|||++|+++|+|.|+|++|+.||+|+++++.++|++++++++||+.+++|
T Consensus 39 ~~~~G~~~~~~~~~~~~~~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~D~~~~~~~ 104 (111)
T 1rjj_A 39 SFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVK 104 (111)
T ss_dssp EEEEEEECCSCTTTSTTCCEEEEEEESSHHHHHHHHTSHHHHHHHHHHHHTCSEEEEEEEEECTTC
T ss_pred EEEEcCCCCCccccCCCccEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHhcceEEEEeEcceec
Confidence 58999999 988889999999999999999999999999999999999999999999999988765
No 3
>1tr0_A Stable protein 1; plant protein; 1.80A {Populus tremula} SCOP: d.58.4.4 PDB: 1si9_A
Probab=99.87 E-value=3.5e-22 Score=117.42 Aligned_cols=61 Identities=44% Similarity=0.731 Sum_probs=58.4
Q ss_pred eeeecccCCcc--ccCCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeec
Q 035344 2 CCNRGKNVSIE--NLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKP 62 (67)
Q Consensus 2 ~~~~G~n~s~e--~~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~ 62 (67)
.+++|+|.+++ ++++|||++|+++|+|.|||++|+.||+|+++++.++|++++++++||+.
T Consensus 45 ~~~~G~~~~~~~~~~~~~~d~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~D~~~ 107 (108)
T 1tr0_A 45 SFNWGTDLGMESAELNRGYTHAFESTFESKSGLQEYLDSAALAAFAEGFLPTLSQRLVIDYFL 107 (108)
T ss_dssp EEEEEECCSCSCTTTTTTCCEEEEEEESSHHHHHHHHTCHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEEccCCCccccccCCCccEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHhCCcEEEEEEe
Confidence 58999999988 88999999999999999999999999999999999999999999999985
No 4
>2qyc_A Ferredoxin-like protein; stress responsive A/B barrel domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 1.90A {Bordetella bronchiseptica RB50}
Probab=99.86 E-value=8.6e-22 Score=114.92 Aligned_cols=62 Identities=27% Similarity=0.424 Sum_probs=58.4
Q ss_pred eeeecccCCccccCCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeeccee
Q 035344 2 CCNRGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPTTV 65 (67)
Q Consensus 2 ~~~~G~n~s~e~~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~~~~ 65 (67)
.+++|+|.+ ++++|||++|+++|+|.|+|++|+.||+|+++++.++|++++++++||+.+++
T Consensus 41 ~~~~G~~~~--~~~~~~~~~~~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~D~~~~~~ 102 (103)
T 2qyc_A 41 LYHFGENVA--ARSQGYTHATSSAFVDAAAHDAYQVCPAHVAMKAFMGPRIKRVVVYDGEVPAI 102 (103)
T ss_dssp EEEEEECCC--TTCTTCCEEEEEEESSHHHHHHHTTCHHHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred EEEECCCCC--CCCCCccEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHhcCcEEEEEecCCc
Confidence 578999998 67899999999999999999999999999999999999999999999998764
No 5
>3bn7_A Ferredoxin-like protein; stress responsive A/B barre structural genomics, joint center for structural genomics; HET: MSE; 1.64A {Caulobacter crescentus}
Probab=99.85 E-value=2.1e-21 Score=116.71 Aligned_cols=61 Identities=20% Similarity=0.181 Sum_probs=57.6
Q ss_pred eeeecccCCcc---ccCCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeec
Q 035344 2 CCNRGKNVSIE---NLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKP 62 (67)
Q Consensus 2 ~~~~G~n~s~e---~~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~ 62 (67)
.+++|+|.+++ ++++|||++|+++|+|+|+|++|+.||+|+++++.++|++++++++||+.
T Consensus 56 ~~~vG~~~s~e~R~~~~~g~d~~l~~~F~s~edl~~Y~~HP~H~~~~~~~~p~~e~~~v~D~~~ 119 (120)
T 3bn7_A 56 QLHVGVPAATEKRDVVDNSYDVSELMVFKSVEDQKRYRDHPLLQKFVADCSHLWSKVVVYDSMS 119 (120)
T ss_dssp EEEEECCCCCCCCTTCCCCCSEEEEEEESSHHHHHHHHTCHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEEccCCCcccccccCCCccEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHhccEEEEEEee
Confidence 58999999986 56899999999999999999999999999999999999999999999974
No 6
>3bb5_A Stress responsive alpha-beta protein; dimeric ferredoxin-like protein, structural genomics, joint for structural genomics, JCSG; HET: CIT; 2.30A {Jannaschia SP}
Probab=99.85 E-value=2.2e-21 Score=116.75 Aligned_cols=61 Identities=23% Similarity=0.424 Sum_probs=58.3
Q ss_pred eeeecccCCccccCCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhh----cceEEEEeec
Q 035344 2 CCNRGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANL----EKVLVIDYKP 62 (67)
Q Consensus 2 ~~~~G~n~s~e~~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~----~~~~v~Df~~ 62 (67)
.+++|+|.+|+++++|||++|+++|+|+|+|++|+.||+|+++++.++|++ ++++++||+.
T Consensus 57 ~~~~G~~~s~e~~~~g~~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~p~~~gg~~~~~v~D~~~ 121 (121)
T 3bb5_A 57 EFRHGPNRDFEQKSERYPYGFLCTFTDKAALDAYAVHPTHQRAGGMLVASCRNGADGILVVDLEV 121 (121)
T ss_dssp EEEEEEBCCTTSSCTTCCEEEEEEESSHHHHHHHHHSHHHHHHHHHHHHTBTTGGGGEEEEEEEC
T ss_pred EEEECCCCCccccCCCeeEEEEEEECCHHHHHHHHcCHhHHHHHHHHHHHhCcCcCCEEEEeEEC
Confidence 589999999988889999999999999999999999999999999999999 9999999984
No 7
>3bgu_A Ferredoxin-like protein of unknown function; ferredoxin-like fold, stress responsive A/B barrel domain, S genomics; 1.50A {Thermobifida fusca}
Probab=99.82 E-value=2e-20 Score=111.79 Aligned_cols=59 Identities=12% Similarity=0.271 Sum_probs=55.9
Q ss_pred eeeecccCCccccCCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeec
Q 035344 2 CCNRGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKP 62 (67)
Q Consensus 2 ~~~~G~n~s~e~~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~ 62 (67)
.+++|+|.+ ++++|||++|+++|+|.|||++|+.||+|+++++.++|++++++++||+.
T Consensus 58 ~~~~G~~~s--~~~~g~d~~l~~~F~s~edl~~Y~~hP~H~~~~~~~~p~~~~~~v~D~~i 116 (116)
T 3bgu_A 58 NYAFGADLG--LAAGNYDFAVVADLDGEDGFRAYQDHPDHRAALAIIAPMLADRVAVQFAL 116 (116)
T ss_dssp EEEEEECCS--CSTTCCSEEEEEEEEHHHHHHHHHHSHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEEccCCC--CCCCCeeEEEEEEECCHHHHHHHhcCHHHHHHHHHHHHHhCceEEEEEEC
Confidence 578999998 67899999999999999999999999999999999999999999999973
No 8
>3fmb_A Dimeric protein of unknown function and ferredoxi fold; YP_212648.1, stress responsive A/B barrel domain; HET: MSE; 1.85A {Bacteroides fragilis}
Probab=99.82 E-value=2.4e-20 Score=111.92 Aligned_cols=58 Identities=22% Similarity=0.359 Sum_probs=54.4
Q ss_pred eeeecccCCccccCCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeec
Q 035344 2 CCNRGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKP 62 (67)
Q Consensus 2 ~~~~G~n~s~e~~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~ 62 (67)
.+++|+|.++ ++|||++|+++|+|+|||++|+.||+|+++++.++|++++++++||+.
T Consensus 61 ~~~vG~~~s~---~~~yd~~l~~~F~s~e~l~~Y~~HP~H~~~~~~~~p~~e~~~vvDye~ 118 (118)
T 3fmb_A 61 KIEVGLNMNP---GETWNIALYSEFDNLDDVKFYATHPEHVAAGKILAETKESRACVDYEF 118 (118)
T ss_dssp EEEEEECCCT---TCCCCEEEEEEESSHHHHHHHHHSHHHHHHHHTTTTTEEEEEEEEEEC
T ss_pred EEEEeccCCC---CCCceEEEEEEECCHHHHHHHhCCHhHHHHHHHHHHhhcccEEEEEEC
Confidence 5899999985 359999999999999999999999999999999999999999999983
No 9
>3bde_A MLL5499 protein; stress responsive A/B barrel domain, structural genomics, JO center for structural genomics, JCSG; 1.79A {Mesorhizobium loti}
Probab=99.78 E-value=3.6e-19 Score=107.10 Aligned_cols=59 Identities=25% Similarity=0.472 Sum_probs=53.9
Q ss_pred eeeecccCCccccCCceeEEEEEEECCHHhHHhhhcChhHHHH-HHHHhhhhcceEEEEeecc
Q 035344 2 CCNRGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEY-ANLFLANLEKVLVIDYKPT 63 (67)
Q Consensus 2 ~~~~G~n~s~e~~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~-~~~~~~~~~~~~v~Df~~~ 63 (67)
.+++|+|.++ +++ ||++|+++|+|+||+++|+.||+|+++ .+.++|++++++++||+..
T Consensus 57 ~~~vG~~~~~--~~~-~d~~l~~~F~s~edl~~Y~~HP~H~~~v~~~~~p~~e~~~vvD~e~~ 116 (120)
T 3bde_A 57 HFEQLRQISP--KID-YHFGFSMEFADQAAYTRYNDHPDHVAFVRDRWVPEVEKFLEIDYVPL 116 (120)
T ss_dssp EEEEEECCCS--SSC-CCEEEEEEESSHHHHHHHHTSHHHHHHHHHTHHHHEEEEEEEEECCC
T ss_pred EEEEccCCCC--CCC-ccEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHHhccEEEEEEEEe
Confidence 5899999995 444 999999999999999999999999999 5899999999999999853
No 10
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=95.71 E-value=0.016 Score=32.63 Aligned_cols=42 Identities=10% Similarity=0.023 Sum_probs=33.6
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhc-ceEEE
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLE-KVLVI 58 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~-~~~v~ 58 (67)
.++..++++|.|.++..++-.+|+.|+.++.-....+ +.+++
T Consensus 51 ~~~~~viieFps~~aa~a~y~SpeYq~a~~~R~~a~~~~~~iv 93 (94)
T 3lo3_A 51 EHKAQVILEFPSREDAYNWYHSEEYQALISTRDLGMDSQFQLI 93 (94)
T ss_dssp CCSEEEEEEESSHHHHHHHHHSHHHHTTHHHHHHHEEEEEEEE
T ss_pred CCCeEEEEECCCHHHHHHHHCCHHHHHHHHHHHhcCceEEEEe
Confidence 4799999999999999999999999998875444443 34444
No 11
>3kkf_A Putative antibiotic biosynthesis monooxygenase; structural genomics, joint center for structural genomics, JCSG; HET: MSE P6G; 1.30A {Bacteroides thetaiotaomicron}
Probab=95.55 E-value=0.071 Score=29.75 Aligned_cols=48 Identities=15% Similarity=0.173 Sum_probs=41.7
Q ss_pred CceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeecc
Q 035344 16 QGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPT 63 (67)
Q Consensus 16 ~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~~ 63 (67)
+.-.+.++-.++|.+++++....|..+++.+.+.+++++..+....+.
T Consensus 51 ~p~~~~~~E~w~d~~a~~~H~~s~~~~~~~~~~~~~l~~~~~~~l~pi 98 (105)
T 3kkf_A 51 RPNHVTILEIYADEAAYKSHIATPHFKKYKEGTLDMVQMLELIDATPL 98 (105)
T ss_dssp CTTEEEEEEEESSHHHHHHHHTSHHHHHHHHHHGGGEEEEEEEEECCS
T ss_pred CCCEEEEEEEECCHHHHHHHhcCHHHHHHHHHHHHHhhCcceEEEeec
Confidence 345799999999999999999999999999999999998777766543
No 12
>2pd1_A Hypothetical protein; unknown function, NE2512 protein, structural genomics, APC72 2, protein structure initiative; 1.86A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=95.32 E-value=0.12 Score=28.39 Aligned_cols=37 Identities=11% Similarity=-0.044 Sum_probs=34.3
Q ss_pred eeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcc
Q 035344 18 FTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 54 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~ 54 (67)
-.+.++-.|+|.++++++...|..+++.+.+.++++.
T Consensus 50 ~~~~~~E~w~~~~a~~~H~~s~~~~~~~~~~~~ll~~ 86 (104)
T 2pd1_A 50 STFGVFDAFADEAGRQAHLNGQIAAALMANAATLLSS 86 (104)
T ss_dssp SEEEEEEEESSHHHHHHHHTSHHHHHHHHHHHHHBSS
T ss_pred CEEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999999999999999875
No 13
>2fb0_A Conserved hypothetical protein; SAD, bacteroides thetaiotaom structural genomics, PSI, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron}
Probab=95.05 E-value=0.12 Score=27.78 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=34.7
Q ss_pred eeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcce
Q 035344 18 FTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKV 55 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~ 55 (67)
-.+.++-.++|.+++++....|..+++.+.+.++++..
T Consensus 51 ~~~~~~e~w~~~~a~~~h~~s~~~~~~~~~~~~~l~~~ 88 (94)
T 2fb0_A 51 DVFMICETWQNAEVLAAHEKTAHFAQYVGIIQELAEMK 88 (94)
T ss_dssp TEEEEEEEESSHHHHHHHTTSHHHHHHHHHHHHHSEEE
T ss_pred CEEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHhcCC
Confidence 47999999999999999999999999999999988754
No 14
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=94.91 E-value=0.11 Score=29.38 Aligned_cols=39 Identities=10% Similarity=0.147 Sum_probs=31.3
Q ss_pred EEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhc-ceEEE
Q 035344 20 HIFESTFESTEGVAEYVAHPAHVEYANLFLANLE-KVLVI 58 (67)
Q Consensus 20 ~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~-~~~v~ 58 (67)
-.++++|.|.++..++-.+|..|+.++.-....+ +++++
T Consensus 55 ~~viieFpS~~aa~~~~~s~~Yq~a~~~R~~a~~~~~~iv 94 (99)
T 2fiu_A 55 RNVVIEFPSVQHAIDCYNSPEYQAAAKIRQEVADAEMMIV 94 (99)
T ss_dssp EEEEEEESSHHHHHHHHHSHHHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHcCHHHHHHHHHHHhhhceeEEEE
Confidence 7889999999999999999999998885555544 34444
No 15
>2gff_A LSRG protein; dimeric alpha+beta barrel ferredoxin fold, sugar binding protein; 1.75A {Yersinia pestis} PDB: 3qmq_A
Probab=94.60 E-value=0.14 Score=28.43 Aligned_cols=38 Identities=8% Similarity=0.058 Sum_probs=34.6
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcc
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 54 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~ 54 (67)
+-.+.++..|+|.++++++...|..+++.+.+.++++.
T Consensus 47 p~~~~~~E~w~d~~a~~~h~~s~~~~~~~~~~~~~l~~ 84 (106)
T 2gff_A 47 PTRFYIYEAYTDEAAVAIHKTTPHYLQCVEQLAPLMTG 84 (106)
T ss_dssp TTEEEEEEEESSHHHHHHHTTSHHHHHHHHHHGGGBSS
T ss_pred CCEEEEEEEECCHHHHHHHhcCHHHHHHHHHHHHHhcC
Confidence 34799999999999999999999999999999999864
No 16
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=94.56 E-value=0.12 Score=31.35 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=32.7
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcc
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 54 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~ 54 (67)
.|+.+++++|.|.++..++-.+|++|+.++.-...+++
T Consensus 86 ~~~~~viieFPS~~aa~a~y~SpeYq~a~~~R~~a~~~ 123 (143)
T 3hhl_A 86 HWDHVFIAEYPSVAAFVEMIRDPVYREAVKHRQAAVED 123 (143)
T ss_dssp CCSEEEEEEESCHHHHHHHHHCHHHHHHHHHHHHHEEE
T ss_pred CCCeEEEEECCCHHHHHHHHcCHHHHHHHHHHHHhhcc
Confidence 48999999999999999999999999988755555553
No 17
>3gz7_A Putative antibiotic biosynthesis monooxygenase; NP_888398.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 2.15A {Bordetella bronchiseptica}
Probab=94.41 E-value=0.13 Score=29.56 Aligned_cols=38 Identities=8% Similarity=0.121 Sum_probs=34.3
Q ss_pred eeEEEEEEECCHHhHH-hhhcChhHHHHHHHHhhhhcce
Q 035344 18 FTHIFESTFESTEGVA-EYVAHPAHVEYANLFLANLEKV 55 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~-~Y~~hP~H~~~~~~~~~~~~~~ 55 (67)
=.+.++..++|.++++ .|...|..+++.+.+.|++++.
T Consensus 67 ~~f~~~E~W~s~eal~~hf~~S~hf~~~~~~~~~ll~~~ 105 (115)
T 3gz7_A 67 QRYTLVVDWETVDNHMVDFRQSADFQEWRKLVGECFAEP 105 (115)
T ss_dssp TEEEEEEEESSHHHHHTTTTTSHHHHHHHHHHGGGBSSC
T ss_pred CEEEEEEEECCHHHHHHHHhcCHHHHHHHHHHHHHhcCC
Confidence 4589999999999999 6799999999999999999754
No 18
>3bm7_A Protein of unknown function with ferredoxin-like; ferredoxin-like fold, antibiotic biosynthesis monooxygenase, structural genomics; HET: MSE; 1.35A {Caulobacter crescentus}
Probab=94.39 E-value=0.22 Score=28.28 Aligned_cols=41 Identities=7% Similarity=-0.078 Sum_probs=36.3
Q ss_pred eeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEE
Q 035344 18 FTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVI 58 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~ 58 (67)
-.+.++-.++|.+++++....|..+++.+.+.+++++...+
T Consensus 68 ~~f~~~E~W~d~ea~~aH~~s~~~~~~~~~~~~ll~~~~~i 108 (115)
T 3bm7_A 68 GVYKVLELYASMDALKHHGGTDYFKAAGAAMGPTMAGAPVI 108 (115)
T ss_dssp TEEEEEEEESSHHHHHHHHHCHHHHHHHHHHGGGEEEEEEE
T ss_pred CEEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHhcCCcEE
Confidence 47999999999999999999999999999999998764433
No 19
>1iuj_A Hypothetical protein TT1380; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.60A {Thermus thermophilus} SCOP: d.58.4.5
Probab=94.34 E-value=0.061 Score=29.55 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=32.1
Q ss_pred eeEEEEEEECCHHhHHhhhcChhHHHHHHHHh----hhhc
Q 035344 18 FTHIFESTFESTEGVAEYVAHPAHVEYANLFL----ANLE 53 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~----~~~~ 53 (67)
-.+.++..|+|.++++++...|.++++.+.+. +++.
T Consensus 48 ~~~~~~~~W~s~~a~~a~~~s~~~~~~~~~~~~~~~~~~~ 87 (106)
T 1iuj_A 48 DPYVVMTLWESEEAFRAWTESPAFKEGHARSGTLPKEAFL 87 (106)
T ss_dssp SCEEEEEEESCHHHHHHHHTSHHHHHHTTTTSSSSCSCBS
T ss_pred CeEEEEEEECCHHHHHHHhcCHHHHHHHhccccCCccccc
Confidence 36899999999999999999999999999887 6664
No 20
>1x7v_A PA3566 protein, APC5058; structural genomics, protein structure initiative, midwest center for structural genomics, alpha-beta plait, PSI; 1.78A {Pseudomonas aeruginosa} SCOP: d.58.4.11
Probab=94.24 E-value=0.15 Score=27.60 Aligned_cols=43 Identities=7% Similarity=0.035 Sum_probs=35.5
Q ss_pred eeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEe
Q 035344 18 FTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDY 60 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df 60 (67)
-.+.++..++|.+++++....|..+++.+.+.++.+...+.-+
T Consensus 53 ~~~~~~e~w~~~~a~~~h~~s~~~~~~~~~~~~~~~~~~v~~~ 95 (99)
T 1x7v_A 53 HLFYMIEQWRDDAALERHQNTEHFLRFSRGNEALLQNVKIDQL 95 (99)
T ss_dssp TEEEEEEEESSHHHHHHHHTSHHHHHHHTTCGGGEEEEEEEEE
T ss_pred CEEEEEEEECCHHHHHHHhcCHHHHHHHHHHHHhcCCceEEEE
Confidence 4689999999999999999999999999988888544444333
No 21
>3kg0_A Snoab; polyketide, anthracycline, oxygenase, cofactor-independent, oxidoreductase; 1.70A {Streptomyces nogalater} PDB: 3kg1_A 3kng_A
Probab=94.22 E-value=0.19 Score=29.56 Aligned_cols=37 Identities=11% Similarity=0.097 Sum_probs=32.9
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhc
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLE 53 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~ 53 (67)
.-.+.+++.++|.++++++...|.+++..+.+.+++.
T Consensus 68 p~~yv~~~~W~s~ea~~a~~~S~~f~a~~~~l~~~~~ 104 (128)
T 3kg0_A 68 DNSYVNIAVWTDHDAFRRALAQPGFLPHATALRALST 104 (128)
T ss_dssp SSEEEEEEEESSHHHHHHHHHCGGGHHHHHHHHHHEE
T ss_pred CCEEEEEEEECCHHHHHHHHcCHHHHHHHHhhhhhcc
Confidence 3467999999999999999999999999998888764
No 22
>2bbe_A Hypothetical protein SO0527; MCSG, structural genomics, PSI, protein structure in midwest center for structural genomics; 1.97A {Shewanella oneidensis}
Probab=94.22 E-value=0.22 Score=27.69 Aligned_cols=39 Identities=15% Similarity=0.127 Sum_probs=35.1
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHH-HHHHHhhhhcce
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVE-YANLFLANLEKV 55 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~-~~~~~~~~~~~~ 55 (67)
+-.+.++-.++|.+++++....|..++ +.+.+.+++++.
T Consensus 59 p~~~~~~E~w~~~~a~~~H~~s~~~~~~~~~~~~~~l~~~ 98 (108)
T 2bbe_A 59 PRRVTFVEKFVDIAAFDEHCAKDAIQHYFHQVMPELVESF 98 (108)
T ss_dssp TTEEEEEEEESSHHHHHHHHTSHHHHHHHHHTHHHHEEEE
T ss_pred CCEEEEEEEECCHHHHHHHhcChHHHHHHHHHHHHhcccc
Confidence 346899999999999999999999999 999999998774
No 23
>2omo_A DUF176; structural genomics, APC6266, PSI-2, protein structure initi midwest center for structural genomics, MCSG, oxidoreductas; HET: MSE; 1.83A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=94.02 E-value=0.2 Score=28.99 Aligned_cols=38 Identities=3% Similarity=0.079 Sum_probs=34.8
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcc
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 54 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~ 54 (67)
.-.+.++-.|+|.+++++....|..+++.+.+.++++.
T Consensus 69 p~~f~~~E~W~d~eal~aH~~s~~~~~~~~~~~~ll~~ 106 (124)
T 2omo_A 69 PTRFVLYEAYKTRKDAAAHKETAHYLTWRDTVADWMAE 106 (124)
T ss_dssp TTEEEEEEEESSHHHHHHHTTSHHHHHHHHHHGGGBSS
T ss_pred CCEEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHhcC
Confidence 34799999999999999999999999999999999875
No 24
>1y0h_A Hypothetical protein RV0793; ferredoxin-like fold, alpha+beta sandwich with antiparallel sheet, structural genomics, PSI; 1.60A {Mycobacterium tuberculosis} SCOP: d.58.4.11
Probab=94.01 E-value=0.091 Score=28.69 Aligned_cols=37 Identities=14% Similarity=0.114 Sum_probs=34.0
Q ss_pred eeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcc
Q 035344 18 FTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 54 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~ 54 (67)
-.+.++..++|.+++++....|..+++.+.+.++++.
T Consensus 51 ~~~~~~e~w~~~~a~~~h~~s~~~~~~~~~~~~~l~~ 87 (102)
T 1y0h_A 51 GELVLFERYRSRIALDEHRGSPHYLNYRAQVGELLTR 87 (102)
T ss_dssp SCEEEEEEESSHHHHHHHHTSHHHHHHHTTSGGGBSS
T ss_pred CEEEEEEEECCHHHHHHHhcChHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999999998865
No 25
>4dpo_A Conserved protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.73A {Methanosarcina mazei}
Probab=93.90 E-value=0.2 Score=28.80 Aligned_cols=38 Identities=11% Similarity=0.062 Sum_probs=35.0
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcc
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 54 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~ 54 (67)
.-.+.++-.++|.++++++...|..+++.+.+.++++.
T Consensus 71 p~~f~~~E~W~d~ea~~aH~~s~~f~~~~~~~~~ll~~ 108 (119)
T 4dpo_A 71 PEILTMLEEWKDEGSLDQHIRSDHFKEIFPLLSECLDK 108 (119)
T ss_dssp EEEEEEEEEESSHHHHHHHHTSHHHHHHHHHHHHTBSS
T ss_pred CCEEEEEEEECCHHHHHHHHcCHHHHHHHHHHHHHhcC
Confidence 45699999999999999999999999999999999974
No 26
>1tuv_A Protein YGIN; menadione oxidase, monooxygenase, CO-crystal with natural PR ferredoxin fold, unknown function; HET: VK3; 1.70A {Escherichia coli} SCOP: d.58.4.11 PDB: 1r6y_A
Probab=93.74 E-value=0.37 Score=27.27 Aligned_cols=42 Identities=10% Similarity=0.149 Sum_probs=36.6
Q ss_pred CceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEE
Q 035344 16 QGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLV 57 (67)
Q Consensus 16 ~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v 57 (67)
+.-.+.++-.++|.+++++....|..+++.+.+.+++++..+
T Consensus 56 ~p~~~~~~E~W~d~~al~aH~~s~h~~~~~~~~~~l~~~~~i 97 (114)
T 1tuv_A 56 APDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNI 97 (114)
T ss_dssp CTTEEEEEEEESCHHHHHHHHTSHHHHHHHHHHTTTEEEEEE
T ss_pred CCCEEEEEEEECCHHHHHHHhcCHHHHHHHHHHHHhccCCEE
Confidence 345799999999999999999999999999999998876433
No 27
>4dn9_A Antibiotic biosynthesis monooxygenase; structural genomics,protein structure initiative, NEW YORK S genomix research consortium, nysgrc; 2.05A {Chloroflexus aurantiacus}
Probab=93.27 E-value=0.37 Score=27.88 Aligned_cols=45 Identities=7% Similarity=-0.070 Sum_probs=38.1
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcce-EEEEee
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKV-LVIDYK 61 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~-~v~Df~ 61 (67)
.-.+.++-.++|.+++++....|.-+++.+.+.++++.. .+..+.
T Consensus 66 p~~f~~~E~W~d~ea~~aH~~s~~f~~~~~~~~~ll~~~p~i~~~~ 111 (122)
T 4dn9_A 66 PDAIWITEVWDSPESHKASLSLPSVQDAIACGRPLIAALDEHHETV 111 (122)
T ss_dssp EEEEEEEEEESCHHHHHHGGGSHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCEEEEEEEECCHHHHHHHHcCHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 456899999999999999999999999999999999764 444444
No 28
>3e8o_A Uncharacterized protein with erredoxin-like fold; putative antibiotic biosynthesis monooxygenase; HET: MSE; 1.40A {Deinococcus radiodurans}
Probab=93.16 E-value=0.34 Score=27.64 Aligned_cols=37 Identities=5% Similarity=0.001 Sum_probs=33.9
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhc
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLE 53 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~ 53 (67)
.-.+.++-.++|.++++++...|..+++.+.+.+++.
T Consensus 65 p~~f~~~E~W~d~ea~~aH~~s~~~~~~~~~~~~ll~ 101 (119)
T 3e8o_A 65 PGHFLITEHWDNLGAMHTHLALPGVTQAIDALKHLNV 101 (119)
T ss_dssp TTEEEEEEEESSHHHHHHHHTCHHHHHHHHHHHHTTC
T ss_pred CCEEEEEEEECCHHHHHHHHcCHHHHHHHHHHHHHhc
Confidence 3479999999999999999999999999999999965
No 29
>4hl9_A Antibiotic biosynthesis monooxygenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.93A {Rhodospirillum rubrum}
Probab=92.98 E-value=0.38 Score=27.83 Aligned_cols=44 Identities=9% Similarity=0.002 Sum_probs=37.5
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEe
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDY 60 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df 60 (67)
.-.+.++-.++|.+++++....|..+++.+.+.+++++...+.+
T Consensus 69 p~~f~~~E~w~d~~al~~H~~s~h~~~~~~~l~~~l~~~~~i~~ 112 (118)
T 4hl9_A 69 PGHFVFIEEWPDRAALDIHCATEHFTRLVPLINAHQRQDGTVVL 112 (118)
T ss_dssp EEEEEEEEEESSHHHHHHHHHSHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCEEEEEEEeCCHHHHHHHHCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 45689999999999999999999999999999999976544433
No 30
>2ftr_A BH0200; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.40A {Bacillus halodurans} SCOP: d.58.4.15
Probab=91.54 E-value=1 Score=25.41 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=34.0
Q ss_pred CCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcc
Q 035344 15 HQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 54 (67)
Q Consensus 15 ~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~ 54 (67)
...|+.+..+.|+|.+++++....|.-+++.+-+..+.+.
T Consensus 57 ~~~yd~iael~fds~ea~~aa~~s~e~~~~~~D~~~F~d~ 96 (108)
T 2ftr_A 57 ESKFYLMCEMYYDDHESLQQAMRTDEGKASGKDAMKFAGK 96 (108)
T ss_dssp CCSEEEEEEEEESSHHHHHHHHHSHHHHHHHHHHHHHTGG
T ss_pred CCCeeEEEEEEECCHHHHHHHHcCHhHHHHHHHHHHhcCC
Confidence 4579999999999999999999889778887777776654
No 31
>1q8b_A Protein YJCS; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG, unknown function; 1.90A {Bacillus subtilis} SCOP: d.58.4.6
Probab=91.51 E-value=0.27 Score=27.34 Aligned_cols=39 Identities=13% Similarity=0.109 Sum_probs=34.1
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcce
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKV 55 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~ 55 (67)
.-.+.++-.++|.+++++....|.-+++.+.+.++++..
T Consensus 60 p~~~~~~E~w~d~~a~~~H~~s~~~~~~~~~~~~~l~~~ 98 (105)
T 1q8b_A 60 ERKIMLWEIWENEEAVKIHFTKKHTIDVQKQELTEVEWL 98 (105)
T ss_dssp GCEEEEEEEESSHHHHHHHTTSHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEEEEECCHHHHHHHhcCHHHHHHHHHHHHHhhCh
Confidence 346999999999999999999999999999888877654
No 32
>3hf5_A 4-methylmuconolactone methylisomerase; ferredoxin, ferredoxin-like fold, beta-barrel, biodegradation, ortho- cleavage; HET: 3ML; 1.40A {Pseudomonas reinekei} SCOP: d.58.4.19 PDB: 3hds_A* 3hfk_A* 2ifx_A*
Probab=91.24 E-value=0.76 Score=26.69 Aligned_cols=40 Identities=15% Similarity=0.042 Sum_probs=35.3
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceE
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVL 56 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~ 56 (67)
.||=+..+-|+|.+++++....|..++..+-....+..+.
T Consensus 69 ~~DgiaElwF~d~ea~~aa~~sp~~~a~~~d~~~F~~~i~ 108 (116)
T 3hf5_A 69 RIDAIGECWFASEEQYQVYMESDIRKAWFEHGKYFIGQLK 108 (116)
T ss_dssp CCCEEEEEEESSHHHHHHHHHCHHHHHHHHHHHHHCSEEE
T ss_pred CcCEEEEEEECCHHHHHHHhCCHHHHHHHhhHHHhhhhhh
Confidence 7999999999999999999999999998887777776543
No 33
>2zdo_A Heme-degrading monooxygenase ISDG; ruffling, protein-substrate complex, cytoplasm, iron, metal-binding, oxidoreductase; HET: HEM; 1.80A {Staphylococcus aureus} PDB: 1xbw_A
Probab=91.06 E-value=0.34 Score=26.99 Aligned_cols=31 Identities=3% Similarity=0.030 Sum_probs=27.9
Q ss_pred eeEEEEEEECCHHhHHhhhcChhHHHHHHHH
Q 035344 18 FTHIFESTFESTEGVAEYVAHPAHVEYANLF 48 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~ 48 (67)
-.+.++..++|.++++++...|.|++..+..
T Consensus 52 ~~~~~~~~W~s~ea~~a~~~s~~f~~~~~~~ 82 (109)
T 2zdo_A 52 DEVKILTVWKSKQAFTDWLKSDVFKAAHKHV 82 (109)
T ss_dssp EEEEEEEEESCHHHHHHHHTSHHHHHHHTTC
T ss_pred eEEEEEEEECCHHHHHHHHcCHHHHHHHHhh
Confidence 3799999999999999999999999988644
No 34
>3f44_A Putative monooxygenase; YP_193413.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.55A {Lactobacillus acidophilus ncfm}
Probab=90.47 E-value=0.93 Score=28.64 Aligned_cols=47 Identities=15% Similarity=0.032 Sum_probs=41.5
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeecc
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPT 63 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~~ 63 (67)
.-.+.++-.++|.+++++....|..+++.+.+.+++++.-+..+.+.
T Consensus 163 p~~f~~~E~w~d~~Al~aH~~s~hf~~~~~~~~~ll~~~~v~~l~p~ 209 (220)
T 3f44_A 163 PNEWYFIEVYANDEAYDIHVKTPHYKEYIEETDGMVKSRDVKTLVRD 209 (220)
T ss_dssp EEEEEEEEEESSHHHHHHHTTSHHHHHHHHHTTTTEEEEEEEEEEEE
T ss_pred CCEEEEEEEECCHHHHHHHhcCHHHHHHHHHHHHHhcCCceEEeech
Confidence 45789999999999999999999999999999999998777777654
No 35
>1sqe_A Hypothetical protein PG130; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Staphylococcus aureus} SCOP: d.58.4.5 PDB: 2zdp_A* 3lgm_A* 3lgn_A* 3qgp_A*
Probab=90.08 E-value=0.47 Score=26.34 Aligned_cols=31 Identities=10% Similarity=0.056 Sum_probs=26.1
Q ss_pred eeEEEEEEECCHHhHHhhhcChhHHHHHHHH
Q 035344 18 FTHIFESTFESTEGVAEYVAHPAHVEYANLF 48 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~ 48 (67)
-.+.++..++|.++++++...|.|++..+..
T Consensus 50 ~~~~~~~~W~s~ea~~a~~~s~~f~~~~~~~ 80 (109)
T 1sqe_A 50 DEVKILTIWESEDSFNNWLNSDVFKEAHKNV 80 (109)
T ss_dssp EEEEEEEEESCHHHHHHHHTSHHHHHCC---
T ss_pred cEEEEEEEECCHHHHHHHHcCHHHHHHHhcc
Confidence 5799999999999999999999999877765
No 36
>3tvz_A Putative uncharacterized protein YHGC; putative monooxygenase, ABM family, ferredoxin fold, monooxy oxidoreductase; 2.00A {Bacillus subtilis subsp}
Probab=89.45 E-value=0.35 Score=29.76 Aligned_cols=31 Identities=10% Similarity=0.049 Sum_probs=19.0
Q ss_pred eEEEEEEECCHHhHHhhhcChhHHHHHHHHh
Q 035344 19 THIFESTFESTEGVAEYVAHPAHVEYANLFL 49 (67)
Q Consensus 19 ~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~ 49 (67)
.+.+++.++|.|+++++...|++++..+...
T Consensus 118 ~y~~~t~Wes~eaf~aw~~S~~f~~ah~~~g 148 (172)
T 3tvz_A 118 TYVILTLWETERAFQDWQQSDSYKEAHKKRG 148 (172)
T ss_dssp EEEEEEEESCHHHHHHHTCC-----------
T ss_pred EEEEEEEECCHHHHHHHHcCHHHHHHHHhcC
Confidence 5789999999999999999999998877666
No 37
>1lq9_A Actva-ORF6 monooxygenase; aromatic polyketides, actinorhodin, dihydroka streptomyces coelicolor, oxidoreductase; HET: PG4; 1.30A {Streptomyces coelicolor} SCOP: d.58.4.3 PDB: 1n5q_A* 1n5s_A* 1n5t_A* 1n5v_A*
Probab=86.33 E-value=1.6 Score=24.81 Aligned_cols=43 Identities=9% Similarity=-0.043 Sum_probs=35.4
Q ss_pred ceeEEEEEEECCHHhHHhh----hcChhHHHHHHHHhhhhcceEEEE
Q 035344 17 GFTHIFESTFESTEGVAEY----VAHPAHVEYANLFLANLEKVLVID 59 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y----~~hP~H~~~~~~~~~~~~~~~v~D 59 (67)
+-+.+++...+|.+++++. ...|.-+++.+.+.++++...++-
T Consensus 56 ~~~~v~~e~W~s~ea~~ah~~~~~~s~~f~~~~~~~~~l~~~~~~~~ 102 (112)
T 1lq9_A 56 GTAVVNYAQWESEQAYRVNFGADPRSAELREALSSLPGLMGPPKAVF 102 (112)
T ss_dssp SSEEEEEEEESCHHHHHHHTTTSHHHHHHHHHHHTSTTBCSCCEEEE
T ss_pred CCeEEEEEEECCHHHHHHHHhcccCCHHHHHHHHHhHHHhcCccceE
Confidence 3456999999999999999 889988999998888887654443
No 38
>3fj2_A Monooxygenase-like protein; structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS unknown function; HET: MSE; 1.85A {Listeria innocua} PDB: 3fez_A*
Probab=86.14 E-value=1.6 Score=27.33 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=29.9
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhh
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLAN 51 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~ 51 (67)
.=.+.+++..+|.++++++...|+|++..+.+++.
T Consensus 130 ~~~yv~lT~WeseeaF~aW~~S~afr~ah~~l~~~ 164 (186)
T 3fj2_A 130 TNQFLIVSFWDSEVFFQEWKKTPLHKEITSIMKKN 164 (186)
T ss_dssp SSEEEEEEEESSHHHHHHHTTSHHHHHHHHHHHHT
T ss_pred CCEEEEEEEECCHHHHHHHHcCHHHHHHHHhhhcc
Confidence 34688999999999999999999999988666543
No 39
>3bf4_A Ethyl TERT-butyl ether degradation ETHD protein; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 2.10A {Ralstonia eutropha JMP134}
Probab=85.49 E-value=3 Score=24.55 Aligned_cols=41 Identities=10% Similarity=-0.022 Sum_probs=30.7
Q ss_pred ccCCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcc
Q 035344 13 NLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 54 (67)
Q Consensus 13 ~~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~ 54 (67)
+...+|+-+..+.|+|.|++++-. -|.=+++.+-+..+.+.
T Consensus 71 g~~~~yd~iael~FdS~eal~aA~-~~~~~~v~aDv~nFtd~ 111 (127)
T 3bf4_A 71 GAPPAFVAMCAFICDSAENFYAAM-YYHGAEILGDIANYTDI 111 (127)
T ss_dssp TCCCSEEEEEEEEESCHHHHHHHH-HHHHHHHHHTGGGTBCC
T ss_pred CCCCCEEEEEEEEECCHHHHHHHh-CccHHHHHhhHHHhCCC
Confidence 334689999999999999999988 45445566666666543
No 40
>1tz0_A Hypothetical protein; structural genomics, protein structure initiative, MCSG, HYP protein, PSI; 1.84A {Bacillus cereus atcc 14579} SCOP: d.58.4.5
Probab=84.37 E-value=0.6 Score=26.56 Aligned_cols=30 Identities=13% Similarity=0.099 Sum_probs=26.7
Q ss_pred eeEEEEEEECCHHhHHhhhcChhHHHHHHH
Q 035344 18 FTHIFESTFESTEGVAEYVAHPAHVEYANL 47 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~ 47 (67)
=.+.+++.++|.|+++++...|+|++..+.
T Consensus 55 ~~y~~~~~W~s~eaf~aw~~S~~f~~~~~~ 84 (114)
T 1tz0_A 55 EEVVVMIRWESEEAWKNWETSEEHLAGHRA 84 (114)
T ss_dssp EEEEEEEEESCHHHHHHHHTCSCCCGGGSS
T ss_pred cEEEEEEEECCHHHHHHHHcCHHHHHHHHh
Confidence 469999999999999999999999886664
No 41
>3hx9_A Protein RV3592; DI-heme, beta barrel, dimer, oxidoreductase; HET: HEM; 1.75A {Mycobacterium tuberculosis}
Probab=84.28 E-value=0.63 Score=27.19 Aligned_cols=43 Identities=14% Similarity=0.174 Sum_probs=29.8
Q ss_pred eEEEEEEECCHHhHHhhhcChhHHHHHH-HHhhhhcceEEEEee
Q 035344 19 THIFESTFESTEGVAEYVAHPAHVEYAN-LFLANLEKVLVIDYK 61 (67)
Q Consensus 19 ~~~l~~~F~s~e~l~~Y~~hP~H~~~~~-~~~~~~~~~~v~Df~ 61 (67)
.+.++..++|.++++++...|...+-.. ..+|+....-.+-|+
T Consensus 50 ~yv~~~~WeS~ea~~aw~~S~fr~ah~~~~~~~~~~g~p~~efe 93 (124)
T 3hx9_A 50 RYFVVTHWESDEAFQAWANGPAIAAHAGHRANPVATGASLLEFE 93 (124)
T ss_dssp SEEEEEEESCHHHHHHHHHTHHHHTTTTCCCCCCCCCEEEEEEE
T ss_pred EEEEEEEECCHHHHHHHHhChHHHHhhcccCCCcccCCCceeEE
Confidence 4889999999999999999994333322 356776543333355
No 42
>3fgv_A Uncharacterized protein with ferredoxin-like fold; phosphoserine aminotransferase SERC, structural genomics; HET: MSE; 1.30A {Silicibacter pomeroyi dss-3}
Probab=82.25 E-value=0.87 Score=25.90 Aligned_cols=36 Identities=14% Similarity=0.078 Sum_probs=31.4
Q ss_pred EEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEE
Q 035344 24 STFESTEGVAEYVAHPAHVEYANLFLANLEKVLVID 59 (67)
Q Consensus 24 ~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~D 59 (67)
..++|.+++++|..-|.-+++.+.+.+++++-..+.
T Consensus 66 E~W~s~eal~~h~~~~~~~~~~~~l~~lla~~p~I~ 101 (106)
T 3fgv_A 66 HIWETPDALEAYLTWRADRGDFLEINEYLEVEQDFK 101 (106)
T ss_dssp EEESSHHHHHHHHHHHTTCHHHHHGGGGBSSCCEEE
T ss_pred EEECCHHHHHHHHcCHHHHHHHHHHHHHhcCCcEEE
Confidence 999999999999999998999999999998644443
No 43
>2go8_A Hypothetical protein YQJZ; SR435, protein structure, structural genomics, PSI, protein initiative, northeast structural genomics consortium; 2.30A {Bacillus subtilis} SCOP: d.58.4.5
Probab=80.01 E-value=1 Score=26.46 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=20.6
Q ss_pred eEEEEEEECCHHhHHhhhcChhHHHHHHH-Hhhhhc
Q 035344 19 THIFESTFESTEGVAEYVAHPAHVEYANL-FLANLE 53 (67)
Q Consensus 19 ~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~-~~~~~~ 53 (67)
-.+.++.++|.++++++..+|+|++..+. .....+
T Consensus 58 ~~is~SyW~deeai~aW~~~~eHr~Aq~~Gr~~w~~ 93 (122)
T 2go8_A 58 RGITVSYWDSMDAINHWRHHTEHQAAKEKGRSVWYE 93 (122)
T ss_dssp EEEEEEEESCHHHHHHHHHHC-------------CC
T ss_pred CEEEEEEeCCHHHHHHHHhCHHHHHHHHhHHHHHhc
Confidence 67888999999999999999999987665 444444
No 44
>3mcs_A Putative monooxygenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.55A {Fusobacterium nucleatum subsp}
Probab=76.71 E-value=12 Score=23.69 Aligned_cols=47 Identities=2% Similarity=-0.099 Sum_probs=40.8
Q ss_pred ceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeecc
Q 035344 17 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPT 63 (67)
Q Consensus 17 gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~~ 63 (67)
.=.+.|+=.+.|.+++++-...|.-+++.+.+.+++++..+.+..+.
T Consensus 159 p~~f~~~E~w~d~~A~~aH~~s~Hf~~~~~~~~~~l~~~~~~~l~~~ 205 (219)
T 3mcs_A 159 FNKWCLFEVYKDIDSYLNHRSAKYFKDYITQTKDMIAGKKRAELQVL 205 (219)
T ss_dssp EEEEEEEEEESSHHHHHHHHTSHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CCEEEEEEEECCHHHHHHHhcCHHHHHHHHHHHHHHhCCceeeccch
Confidence 34689999999999999999999999999999999998777766543
No 45
>3f44_A Putative monooxygenase; YP_193413.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.55A {Lactobacillus acidophilus ncfm}
Probab=73.92 E-value=14 Score=23.14 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=40.4
Q ss_pred CceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceEEEEeecc
Q 035344 16 QGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPT 63 (67)
Q Consensus 16 ~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~v~Df~~~ 63 (67)
+.-.+.++=.+.|.+++++-...|.-++|.+.+.+++++..+++-.+.
T Consensus 52 ~p~~~~~~E~y~d~~A~~~H~~s~h~~~~~~~~~~~l~~~~~~~l~p~ 99 (220)
T 3f44_A 52 HGEDNYEIEVFRNKGAEDLHIAGSHADDFVETVNKIATKQKVIDLHPE 99 (220)
T ss_dssp EEEEEEEEEEESSHHHHHHHHTSHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcEEEEEEEECCHHHHHHHhcCHHHHHHHHHHHHHhhCCceeeeeeE
Confidence 346788999999999999999999999999999999987666655443
No 46
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=70.90 E-value=5.1 Score=20.99 Aligned_cols=24 Identities=4% Similarity=0.268 Sum_probs=20.7
Q ss_pred cCCceeEEEEEEECCHHhHHhhhc
Q 035344 14 LHQGFTHIFESTFESTEGVAEYVA 37 (67)
Q Consensus 14 ~~~gy~~~l~~~F~s~e~l~~Y~~ 37 (67)
.++.||+.+.+...|.++++.+..
T Consensus 34 vtG~~D~ll~v~~~d~~~l~~~i~ 57 (83)
T 2cvi_A 34 VYGEYDLIVKVETDTLKDLDQFIT 57 (83)
T ss_dssp CBSSCSEEEEEEESSHHHHHHHHH
T ss_pred EcccCCEEEEEEECCHHHHHHHHH
Confidence 457899999999999999988763
No 47
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A {Sulfolobus tokodaii}
Probab=66.44 E-value=6 Score=20.35 Aligned_cols=23 Identities=9% Similarity=0.258 Sum_probs=20.1
Q ss_pred cCCceeEEEEEEECCHHhHHhhh
Q 035344 14 LHQGFTHIFESTFESTEGVAEYV 36 (67)
Q Consensus 14 ~~~gy~~~l~~~F~s~e~l~~Y~ 36 (67)
.+++||+.+.+...|.++++.+.
T Consensus 34 vtG~~d~l~~v~~~d~~~l~~~~ 56 (83)
T 2zbc_A 34 VYGVYDIVVKVEADSMDKLKDFV 56 (83)
T ss_dssp CSSSCSEEEEEECSSHHHHHHHH
T ss_pred EeccCCEEEEEEECCHHHHHHHH
Confidence 45789999999999999998765
No 48
>2djw_A Probable transcriptional regulator, ASNC family; structural genomics, thermus thermophilus HB8, NPPSFA; 2.40A {Thermus thermophilus}
Probab=60.99 E-value=8.5 Score=20.41 Aligned_cols=24 Identities=8% Similarity=0.176 Sum_probs=21.1
Q ss_pred cCCceeEEEEEEECCHHhHHhhhc
Q 035344 14 LHQGFTHIFESTFESTEGVAEYVA 37 (67)
Q Consensus 14 ~~~gy~~~l~~~F~s~e~l~~Y~~ 37 (67)
.++.||+.+.+...|.++++.+..
T Consensus 34 vtG~~D~ll~v~~~d~~~l~~~l~ 57 (92)
T 2djw_A 34 VTGPYDLVALVRLKDVEELDDVVT 57 (92)
T ss_dssp ESSSSSEEEEEEESSGGGHHHHCC
T ss_pred eecCCCEEEEEEECCHHHHHHHHH
Confidence 457899999999999999998864
No 49
>3a16_A Oxdre, aldoxime dehydratase; beta barrel, heme protein, lyase; HET: HEM; 1.60A {Rhodococcus erythropolis} PDB: 3a15_A* 3a17_A* 3a18_A*
Probab=56.55 E-value=17 Score=25.25 Aligned_cols=26 Identities=19% Similarity=0.506 Sum_probs=22.0
Q ss_pred EEECCHHhHHhhh-cChhHHHHHH-HHh
Q 035344 24 STFESTEGVAEYV-AHPAHVEYAN-LFL 49 (67)
Q Consensus 24 ~~F~s~e~l~~Y~-~hP~H~~~~~-~~~ 49 (67)
.-|.|.++|+... .||.|+++-. +++
T Consensus 301 gyf~dL~~LErWaksHpTHl~If~~fm~ 328 (373)
T 3a16_A 301 GHWASLDQLERWSESHPTHLRIFTTFFR 328 (373)
T ss_dssp EEESCHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred eeecCHHHHHHHHhcCchHHHHHHHHHH
Confidence 5699999999999 6999999777 444
No 50
>1iap_A Guanine nucleotide exchange factor P115rhogef; RGS, RGRGS, signaling protein; 1.90A {Homo sapiens} SCOP: a.91.1.1
Probab=53.14 E-value=8.5 Score=24.82 Aligned_cols=24 Identities=29% Similarity=0.404 Sum_probs=17.7
Q ss_pred ECCHHhHHhhhcChhHHH-HHHHHhhhh
Q 035344 26 FESTEGVAEYVAHPAHVE-YANLFLANL 52 (67)
Q Consensus 26 F~s~e~l~~Y~~hP~H~~-~~~~~~~~~ 52 (67)
|.|.+.|. .||+|++ |..++....
T Consensus 5 Fqsl~~Lk---~rPAHLaVFL~yV~sq~ 29 (211)
T 1iap_A 5 FQSLEQVK---RRPAHLMALLQHVALQF 29 (211)
T ss_dssp TSCHHHHT---TCHHHHHHHHHHHHHHS
T ss_pred ccCHHHHh---hccHHHHHHHHHHHHcC
Confidence 67777777 7999986 677665444
No 51
>3mcs_A Putative monooxygenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.55A {Fusobacterium nucleatum subsp}
Probab=51.41 E-value=42 Score=21.03 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=35.8
Q ss_pred CceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcceE
Q 035344 16 QGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVL 56 (67)
Q Consensus 16 ~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~~~ 56 (67)
+.-.+.|+=.|.|.+++++=..-|.-+++.+.+.++++++.
T Consensus 52 ~p~~fv~~E~y~d~~A~~~H~~s~Hf~~f~~~~~~~l~~~~ 92 (219)
T 3mcs_A 52 DKTTSYIVEIYNDYLAFSNHTKNQASKDFKAVIPQIAEGNL 92 (219)
T ss_dssp SSCEEEEEEEESSHHHHHHHHHSHHHHHHHHHHHHHEEEEE
T ss_pred CCCEEEEEEEECCHHHHHHHhCCHHHHHHHHHHHHHHhCCc
Confidence 34578999999999999999999999999999999997643
No 52
>3cx8_B RHO guanine nucleotide exchange factor 11; signal transduction, protein complex, GTP-binding, lipoprotein, membrane, nucleotide-binding; HET: GSP; 2.00A {Rattus norvegicus} PDB: 3cx6_B* 3cx7_B* 1htj_F
Probab=47.97 E-value=9.7 Score=24.40 Aligned_cols=23 Identities=26% Similarity=0.546 Sum_probs=17.0
Q ss_pred ECCHHhHHhhhcChhHHH-HHHHHhhh
Q 035344 26 FESTEGVAEYVAHPAHVE-YANLFLAN 51 (67)
Q Consensus 26 F~s~e~l~~Y~~hP~H~~-~~~~~~~~ 51 (67)
|.|.+.|. .||+|.+ |..++...
T Consensus 23 F~sle~Lk---~rPAHLavFL~yvlsq 46 (203)
T 3cx8_B 23 FQDLEKLK---SHPAYLVVFLRYILSQ 46 (203)
T ss_dssp HHCHHHHH---TCHHHHHHHHHHHHHH
T ss_pred ccCHHHHh---cCcHHHHHHHHHHHhc
Confidence 77777777 6999986 67766543
No 53
>3ab3_B RHO guanine nucleotide exchange factor 1; signal transduction, protein complex, GTP-binding, membrane, transducer, lipoprotein, nucleotide-binding; HET: GDP; 2.40A {Homo sapiens} PDB: 1shz_C*
Probab=46.28 E-value=9.7 Score=25.11 Aligned_cols=26 Identities=31% Similarity=0.401 Sum_probs=18.4
Q ss_pred EEECCHHhHHhhhcChhHHH-HHHHHhhhh
Q 035344 24 STFESTEGVAEYVAHPAHVE-YANLFLANL 52 (67)
Q Consensus 24 ~~F~s~e~l~~Y~~hP~H~~-~~~~~~~~~ 52 (67)
.-|.|.+.|+ .||+|++ |..++....
T Consensus 57 g~Fqsle~Lk---~rPAHLaVFL~yV~sq~ 83 (246)
T 3ab3_B 57 SQFQSLEQVK---RRPAHLMALLQHVALQF 83 (246)
T ss_dssp --CCSGGGTT---TCHHHHHHHHHHHHHHS
T ss_pred CcccCHHHHh---ccchHHHHHHHHHHhcC
Confidence 5688888888 5999986 677665444
No 54
>4ae5_A Signal transduction protein trap; signaling protein, phosphorylation, RNAIII, quorum SENS biofilm, toxin production; 1.85A {Staphylococcus aureus}
Probab=43.62 E-value=24 Score=21.52 Aligned_cols=26 Identities=12% Similarity=0.070 Sum_probs=21.8
Q ss_pred eeEEEEEEECCHHhHHhhhcChhHHH
Q 035344 18 FTHIFESTFESTEGVAEYVAHPAHVE 43 (67)
Q Consensus 18 y~~~l~~~F~s~e~l~~Y~~hP~H~~ 43 (67)
=++.+++..+|.++++++...++..+
T Consensus 112 ~~y~v~T~Wes~e~Fe~W~~S~aFr~ 137 (167)
T 4ae5_A 112 TTYKIYFGFADRHAYEDFKQSDAFND 137 (167)
T ss_dssp SCEEEEEEESSHHHHHHHHHSHHHHT
T ss_pred CcEEEEEEECCHHHHHHHhcCHHHHH
Confidence 36788899999999999998876544
No 55
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=42.77 E-value=25 Score=20.36 Aligned_cols=23 Identities=13% Similarity=0.309 Sum_probs=19.8
Q ss_pred cCCceeEEEEEEECCHHhHHhhh
Q 035344 14 LHQGFTHIFESTFESTEGVAEYV 36 (67)
Q Consensus 14 ~~~gy~~~l~~~F~s~e~l~~Y~ 36 (67)
.++.||+.+.+...|.++++.+.
T Consensus 104 vtG~~d~~~~v~~~d~~~l~~~l 126 (162)
T 2p5v_A 104 LTGETDYLLQAFFTDMNAFSHFV 126 (162)
T ss_dssp ESSSCSEEEEEEESSHHHHHHHH
T ss_pred ecCCCCEEEEEEECCHHHHHHHH
Confidence 34679999999999999998764
No 56
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=42.54 E-value=27 Score=19.96 Aligned_cols=23 Identities=4% Similarity=0.251 Sum_probs=19.6
Q ss_pred cCCceeEEEEEEECCHHhHHhhh
Q 035344 14 LHQGFTHIFESTFESTEGVAEYV 36 (67)
Q Consensus 14 ~~~gy~~~l~~~F~s~e~l~~Y~ 36 (67)
.++.||+.+.+.+.|.++++.+.
T Consensus 99 ~tG~~d~~~~v~~~d~~~l~~~~ 121 (151)
T 2cyy_A 99 TTGDYDMVVKIRTKNSEELNNFL 121 (151)
T ss_dssp CSSSSSEEEEEEESSHHHHHHHH
T ss_pred ecCCCCEEEEEEECCHHHHHHHH
Confidence 34689999999999999998664
No 57
>2ril_A Antibiotic biosynthesis monooxygenase; YP_001095275.1, putative monooxygenase, antibiotic biosynthe monooxygenase, structural genomics; HET: MSE; 1.26A {Shewanella loihica}
Probab=41.92 E-value=34 Score=18.08 Aligned_cols=23 Identities=9% Similarity=0.101 Sum_probs=19.0
Q ss_pred CceeEEEEEEECCHHhHHhhhcC
Q 035344 16 QGFTHIFESTFESTEGVAEYVAH 38 (67)
Q Consensus 16 ~gy~~~l~~~F~s~e~l~~Y~~h 38 (67)
..|.++++..++|.+++++...|
T Consensus 52 ~~~~~~~~~~W~s~ea~~a~~~~ 74 (99)
T 2ril_A 52 ATYQLINVAIWQSEADFYQAAQK 74 (99)
T ss_dssp SSCSEEEEEEESCHHHHHHHHHH
T ss_pred CeEEEEEEEEECCHHHHHHHHHh
Confidence 34678999999999999995544
No 58
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=41.58 E-value=29 Score=20.26 Aligned_cols=23 Identities=0% Similarity=0.095 Sum_probs=19.7
Q ss_pred cCCceeEEEEEEECCHHhHHhhh
Q 035344 14 LHQGFTHIFESTFESTEGVAEYV 36 (67)
Q Consensus 14 ~~~gy~~~l~~~F~s~e~l~~Y~ 36 (67)
.++.||+.+.+.+.|.++++.+.
T Consensus 98 vtG~~D~~l~v~~~d~~~l~~~l 120 (162)
T 3i4p_A 98 MSGDVDYLLRVVVPDIAAYDAFY 120 (162)
T ss_dssp CCSSCSEEEEEEESSHHHHHHHH
T ss_pred cCCCCCEEEEEEECCHHHHHHHH
Confidence 35689999999999999998764
No 59
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=41.25 E-value=29 Score=19.84 Aligned_cols=23 Identities=4% Similarity=0.134 Sum_probs=19.7
Q ss_pred cCCceeEEEEEEECCHHhHHhhh
Q 035344 14 LHQGFTHIFESTFESTEGVAEYV 36 (67)
Q Consensus 14 ~~~gy~~~l~~~F~s~e~l~~Y~ 36 (67)
.++.||+.+.+...|.++++.+.
T Consensus 101 vtG~~d~~~~v~~~d~~~l~~~l 123 (152)
T 2cg4_A 101 TTGHYSIFIKVMCRSIDALQHVL 123 (152)
T ss_dssp ESSSCSEEEEEEESCHHHHHHHH
T ss_pred EecccCEEEEEEECCHHHHHHHH
Confidence 35689999999999999998765
No 60
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=38.34 E-value=36 Score=19.24 Aligned_cols=22 Identities=14% Similarity=0.129 Sum_probs=19.3
Q ss_pred CCceeEEEEEEECCHHhHHhhh
Q 035344 15 HQGFTHIFESTFESTEGVAEYV 36 (67)
Q Consensus 15 ~~gy~~~l~~~F~s~e~l~~Y~ 36 (67)
++.||+.+.+...|.++++.+.
T Consensus 98 tG~~d~~~~v~~~d~~~l~~~l 119 (150)
T 2pn6_A 98 LGDNDFIVMARYKTREEFMEKF 119 (150)
T ss_dssp SSSCSEEEEEEESSHHHHHHHT
T ss_pred cCcCCEEEEEEECCHHHHHHHH
Confidence 4679999999999999998765
No 61
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=36.90 E-value=29 Score=19.73 Aligned_cols=22 Identities=5% Similarity=0.138 Sum_probs=19.2
Q ss_pred CCceeEEEEEEE-CCHHhHHhhh
Q 035344 15 HQGFTHIFESTF-ESTEGVAEYV 36 (67)
Q Consensus 15 ~~gy~~~l~~~F-~s~e~l~~Y~ 36 (67)
++.||+.+.+.+ .|.++++.+.
T Consensus 102 tG~~d~~~~v~~~~d~~~l~~~~ 124 (151)
T 2dbb_A 102 VGRYNIIVRLLLPKDIKDAENLI 124 (151)
T ss_dssp ESSCSEEEEEEEESSHHHHHHHH
T ss_pred cCCCCEEEEEEEcCCHHHHHHHH
Confidence 568999999999 9999998754
No 62
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=36.53 E-value=39 Score=18.77 Aligned_cols=23 Identities=13% Similarity=-0.010 Sum_probs=19.7
Q ss_pred cCCceeEEEEEEECCHHhHHhhh
Q 035344 14 LHQGFTHIFESTFESTEGVAEYV 36 (67)
Q Consensus 14 ~~~gy~~~l~~~F~s~e~l~~Y~ 36 (67)
.++.||+.+.+...|.++++.+.
T Consensus 96 ~~G~~d~~~~v~~~d~~~l~~~~ 118 (141)
T 1i1g_A 96 SSGDHMIMAVIWAKDGEDLAEII 118 (141)
T ss_dssp CSSSSSEEEEEEESSHHHHHHHH
T ss_pred ecCCCCEEEEEEECCHHHHHHHH
Confidence 35679999999999999998765
No 63
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=34.66 E-value=32 Score=19.51 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=19.6
Q ss_pred CCceeEEEEEEECCHHhHHhhh
Q 035344 15 HQGFTHIFESTFESTEGVAEYV 36 (67)
Q Consensus 15 ~~gy~~~l~~~F~s~e~l~~Y~ 36 (67)
++.||+.+.+...|.++++.+.
T Consensus 98 tG~~d~~~~v~~~~~~~l~~~~ 119 (144)
T 2cfx_A 98 AGAACYMLKINAESLEAVEDFI 119 (144)
T ss_dssp ESSSSEEEEEEESSHHHHHHHH
T ss_pred eCCCCEEEEEEECCHHHHHHHH
Confidence 4679999999999999999875
No 64
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=34.35 E-value=42 Score=19.90 Aligned_cols=23 Identities=4% Similarity=0.251 Sum_probs=19.8
Q ss_pred cCCceeEEEEEEECCHHhHHhhh
Q 035344 14 LHQGFTHIFESTFESTEGVAEYV 36 (67)
Q Consensus 14 ~~~gy~~~l~~~F~s~e~l~~Y~ 36 (67)
.++.||+.+.+.+.|.++++.+.
T Consensus 119 vtG~~d~l~~v~~~d~~~l~~~l 141 (171)
T 2e1c_A 119 TTGDYDMVVKIRTKNSEELNNFL 141 (171)
T ss_dssp CSSSSSEEEEEEESSHHHHHHHH
T ss_pred eeCCCCEEEEEEECCHHHHHHHH
Confidence 35689999999999999998764
No 65
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=31.54 E-value=18 Score=26.30 Aligned_cols=26 Identities=8% Similarity=0.287 Sum_probs=20.3
Q ss_pred CHHhHHhhhcChhHHHHHH--HHhhhhc
Q 035344 28 STEGVAEYVAHPAHVEYAN--LFLANLE 53 (67)
Q Consensus 28 s~e~l~~Y~~hP~H~~~~~--~~~~~~~ 53 (67)
+.+-++.|..||.|+++.. .++|.++
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (525)
T 3fr7_A 480 NQDLISNFMSDPVHGAIEVCAELRPTVD 507 (525)
T ss_dssp CHHHHHHHHHCTHHHHHHHHHTTSCSSC
T ss_pred hHHHHHHHhhChHHHHHHHHHhcCCCce
Confidence 4556788999999999776 6677764
No 66
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=31.23 E-value=50 Score=18.69 Aligned_cols=22 Identities=5% Similarity=0.087 Sum_probs=19.6
Q ss_pred CCceeEEEEEEECCHHhHHhhh
Q 035344 15 HQGFTHIFESTFESTEGVAEYV 36 (67)
Q Consensus 15 ~~gy~~~l~~~F~s~e~l~~Y~ 36 (67)
++.||+.+.+...|.++++.+.
T Consensus 101 ~G~~d~~~~v~~~~~~~l~~~l 122 (150)
T 2w25_A 101 AGEASYVLLVRVASARALEDLL 122 (150)
T ss_dssp SSSCSEEEEEEESSHHHHHHHH
T ss_pred ECCCCEEEEEEECCHHHHHHHH
Confidence 5689999999999999998865
No 67
>2jdj_A HAPK, REDY-like protein; prodigiosin, biosynthesis, biosynthetic protein; 2.00A {Hahella chejuensis}
Probab=29.45 E-value=83 Score=17.96 Aligned_cols=38 Identities=5% Similarity=0.009 Sum_probs=34.2
Q ss_pred CceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhc
Q 035344 16 QGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLE 53 (67)
Q Consensus 16 ~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~ 53 (67)
..|.++=++.++|++++..=...|.=+++.+.+..+.+
T Consensus 51 ~py~yiEvi~v~s~eaf~~~m~S~~~~~~~~dF~~fAd 88 (105)
T 2jdj_A 51 APYHYVEVIKITDRAAFDADMETSTFAGLVQAFSRMAE 88 (105)
T ss_dssp CSCSEEEEEEESCHHHHHHHHTSHHHHHHHHHHHHHEE
T ss_pred CCeeEEEEEecCCHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 57999999999999999998999999999998877765
No 68
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=26.02 E-value=67 Score=17.55 Aligned_cols=25 Identities=16% Similarity=0.175 Sum_probs=18.2
Q ss_pred HHHHHHhhhhc----ceEEEEeecceeeC
Q 035344 43 EYANLFLANLE----KVLVIDYKPTTVRV 67 (67)
Q Consensus 43 ~~~~~~~~~~~----~~~v~Df~~~~~~~ 67 (67)
++++.++|.+. ++..+|++.+.++|
T Consensus 14 ~~L~~IRP~L~~dGGdvelv~v~~g~V~V 42 (88)
T 1xhj_A 14 EVIERLRPFLLRDGGDCTLVDVEDGIVKL 42 (88)
T ss_dssp HHHHHHHHHHHHHSCEEEEEECCSSEEEE
T ss_pred HHHHHhcHHHHhcCCeEEEEEEECCEEEE
Confidence 34556899984 68888988777654
No 69
>3gn6_A CT0912, orfan protein with A ferredoxin-like DOMA; orfan protein from chlorobium tepidum W ferredoxin-like domain repeat; HET: 2PE; 1.80A {Chlorobium tepidum tls}
Probab=25.27 E-value=1e+02 Score=20.73 Aligned_cols=38 Identities=8% Similarity=-0.040 Sum_probs=30.4
Q ss_pred cCCceeEEEEEEECCHHhHHhhhcChhHHHHHHHHhhhhcc
Q 035344 14 LHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 54 (67)
Q Consensus 14 ~~~gy~~~l~~~F~s~e~l~~Y~~hP~H~~~~~~~~~~~~~ 54 (67)
.++.|-+.|.+.|++.++..+ ...|..|...|.|++..
T Consensus 110 gt~P~Fy~LfvRFad~~~~~a---a~~~a~F~~~I~P~Lh~ 147 (321)
T 3gn6_A 110 GTQPYFYNLFVRFADGRAARA---AGFEALFETHIHPLLHA 147 (321)
T ss_dssp TSSCEEEEEEEEESSHHHHHH---TCHHHHHHHHTGGGCBC
T ss_pred CCcchhhhhhhhccccccchh---cchHHHHHHHhhHHhhh
Confidence 456799999999999999955 45567788888888765
No 70
>1k8v_A Neuropeptide F; moniezia expansa, NPF, unknown function; NMR {Synthetic} SCOP: j.6.1.1
Probab=21.82 E-value=21 Score=17.15 Aligned_cols=14 Identities=7% Similarity=0.406 Sum_probs=11.7
Q ss_pred EEECCHHhHHhhhc
Q 035344 24 STFESTEGVAEYVA 37 (67)
Q Consensus 24 ~~F~s~e~l~~Y~~ 37 (67)
..|+|.+++..|..
T Consensus 12 ~~F~s~~~l~~YL~ 25 (40)
T 1k8v_A 12 LVLDNKAALRDYLR 25 (40)
T ss_dssp CSCSSCSHHHHHHH
T ss_pred hhcCCHHHHHHHHH
Confidence 46999999999974
Done!