BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035373
MAINQLENLVESIKSKVRALKKKKNKPYIKMDKSSSVKVEIRSRKAKKLIDKTLQVADRP
GKRSIQ

High Scoring Gene Products

Symbol, full name Information P value
AT3G19660 protein from Arabidopsis thaliana 1.4e-16

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035373
        (66 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2091156 - symbol:AT3G19660 "AT3G19660" species...   205  1.4e-16   1


>TAIR|locus:2091156 [details] [associations]
            symbol:AT3G19660 "AT3G19660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000417
            EMBL:BT006392 EMBL:AK227811 IPI:IPI00521567 PIR:T52394
            RefSeq:NP_188600.1 UniGene:At.19756 PRIDE:Q9LJN0
            EnsemblPlants:AT3G19660.1 GeneID:821503 KEGG:ath:AT3G19660
            TAIR:At3g19660 eggNOG:NOG261040 HOGENOM:HOG000242797
            InParanoid:Q9LJN0 OMA:RKKTRDL PhylomeDB:Q9LJN0
            ProtClustDB:CLSN2684698 Genevestigator:Q9LJN0 Uniprot:Q9LJN0
        Length = 64

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 43/61 (70%), Positives = 53/61 (86%)

Query:     5 QLENLVESIKSKVRALKKKKNKPYIKMDKSSSVKVEIRSRKAKKLIDKTLQVADRPGKRS 64
             QLE+L+E+IKSKV  L+KKK K YIKMDKSSSV+V IR +K + LIDKTL+VADRPGKR+
Sbjct:     4 QLESLMETIKSKVSLLRKKK-KTYIKMDKSSSVRVAIRRKKTRDLIDKTLKVADRPGKRT 62

Query:    65 I 65
             +
Sbjct:    63 L 63


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.125   0.309    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       66        66   0.00091  102 3  10 23  0.44    28
                                                     29  0.48    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  393 (42 KB)
  Total size of DFA:  74 KB (2064 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.51u 0.12s 15.63t   Elapsed:  00:00:01
  Total cpu time:  15.51u 0.12s 15.63t   Elapsed:  00:00:01
  Start:  Thu May  9 14:07:48 2013   End:  Thu May  9 14:07:49 2013

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