BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035374
(66 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359478321|ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
gi|296084279|emb|CBI24667.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/66 (72%), Positives = 57/66 (86%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
M SFGMEDFA++YG L+PSQFVDVISLVGDK+DNIPGVEGIG+V AVQLITKFG L +
Sbjct: 290 MTSFGMEDFAKRYGNLEPSQFVDVISLVGDKSDNIPGVEGIGNVHAVQLITKFGTLENLL 349
Query: 61 ECFSEM 66
+C ++
Sbjct: 350 QCVDQV 355
>gi|242036411|ref|XP_002465600.1| hypothetical protein SORBIDRAFT_01g041870 [Sorghum bicolor]
gi|241919454|gb|EER92598.1| hypothetical protein SORBIDRAFT_01g041870 [Sorghum bicolor]
Length = 421
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/56 (76%), Positives = 50/56 (89%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDF ++YG LKPSQFVDV++L GDKADNIPGVEGIGD+ AV+LITKFG L
Sbjct: 272 MVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKFGSL 327
>gi|108706960|gb|ABF94755.1| 5'-3' exonuclease, N-terminal resolvase-like domain containing
protein, expressed [Oryza sativa Japonica Group]
Length = 416
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/56 (76%), Positives = 50/56 (89%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDF ++YG LKPSQFVDV++L GDKADNIPGVEGIGD+ AV+LITKFG L
Sbjct: 266 MVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKFGSL 321
>gi|255579458|ref|XP_002530572.1| DNA polymerase I, putative [Ricinus communis]
gi|223529871|gb|EEF31802.1| DNA polymerase I, putative [Ricinus communis]
Length = 246
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 54/62 (87%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
M SFGMEDFA+ YGEL+PSQFVDV++L+GDK+DNIPGVEGIG V AV+LITKFG L +
Sbjct: 95 MVSFGMEDFAKLYGELRPSQFVDVMALMGDKSDNIPGVEGIGTVYAVELITKFGTLENLL 154
Query: 61 EC 62
EC
Sbjct: 155 EC 156
>gi|218192373|gb|EEC74800.1| hypothetical protein OsI_10602 [Oryza sativa Indica Group]
Length = 421
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/56 (76%), Positives = 50/56 (89%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDF ++YG LKPSQFVDV++L GDKADNIPGVEGIGD+ AV+LITKFG L
Sbjct: 271 MVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKFGSL 326
>gi|115451687|ref|NP_001049444.1| Os03g0227300 [Oryza sativa Japonica Group]
gi|108706959|gb|ABF94754.1| 5'-3' exonuclease, N-terminal resolvase-like domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113547915|dbj|BAF11358.1| Os03g0227300 [Oryza sativa Japonica Group]
gi|215704203|dbj|BAG93043.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624502|gb|EEE58634.1| hypothetical protein OsJ_10000 [Oryza sativa Japonica Group]
Length = 421
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/56 (76%), Positives = 50/56 (89%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDF ++YG LKPSQFVDV++L GDKADNIPGVEGIGD+ AV+LITKFG L
Sbjct: 271 MVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKFGSL 326
>gi|24421685|gb|AAN60992.1| Unknown protein [Oryza sativa Japonica Group]
Length = 443
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/56 (76%), Positives = 50/56 (89%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDF ++YG LKPSQFVDV++L GDKADNIPGVEGIGD+ AV+LITKFG L
Sbjct: 293 MVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLITKFGSL 348
>gi|194696700|gb|ACF82434.1| unknown [Zea mays]
gi|195654367|gb|ACG46651.1| DNA polymerase I [Zea mays]
gi|413956435|gb|AFW89084.1| DNA polymerase I [Zea mays]
Length = 422
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/56 (75%), Positives = 50/56 (89%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDF ++YG LKPSQFVDV++L GDKADNIPGVEGIGD+ AV+LI+KFG L
Sbjct: 272 MVSFGVEDFVKRYGPLKPSQFVDVVALSGDKADNIPGVEGIGDINAVKLISKFGSL 327
>gi|449453197|ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sativus]
Length = 461
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/56 (76%), Positives = 51/56 (91%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDFA K+G L+PSQFVDV+SLVGDK+DNIPGV+GIG+V AVQLIT+FG L
Sbjct: 310 MVSFGLEDFADKFGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGTL 365
>gi|42565846|ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|145362483|ref|NP_974414.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|109946597|gb|ABG48477.1| At3g52050 [Arabidopsis thaliana]
gi|332645358|gb|AEE78879.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|332645359|gb|AEE78880.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
Length = 425
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/56 (71%), Positives = 52/56 (92%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
MASFGMEDFA+K+G L+P+QFVD+I+L GDK+DNIPGV+GIG+V AV+LI++FG L
Sbjct: 273 MASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTL 328
>gi|145332809|ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|332645360|gb|AEE78881.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
Length = 448
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/56 (71%), Positives = 52/56 (92%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
MASFGMEDFA+K+G L+P+QFVD+I+L GDK+DNIPGV+GIG+V AV+LI++FG L
Sbjct: 296 MASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTL 351
>gi|357113266|ref|XP_003558425.1| PREDICTED: DNA polymerase I-like [Brachypodium distachyon]
Length = 419
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 50/56 (89%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDF ++YG LKPSQFVDV++L GDKADNIPGVEGIGDV AV+LITKFG L
Sbjct: 269 MVSFGVEDFVKRYGALKPSQFVDVVALSGDKADNIPGVEGIGDVNAVKLITKFGSL 324
>gi|297816476|ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arabidopsis lyrata subsp.
lyrata]
gi|297321959|gb|EFH52380.1| hypothetical protein ARALYDRAFT_485561 [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/56 (71%), Positives = 52/56 (92%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
MASFGMEDFA+K+G L+P+QFVD+I+L GDK+DNIPGV+GIG+V AV+LI++FG L
Sbjct: 302 MASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGSL 357
>gi|145332811|ref|NP_001078271.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|332645361|gb|AEE78882.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
Length = 413
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/56 (71%), Positives = 52/56 (92%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
MASFGMEDFA+K+G L+P+QFVD+I+L GDK+DNIPGV+GIG+V AV+LI++FG L
Sbjct: 261 MASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTL 316
>gi|238480047|ref|NP_001154673.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|332645362|gb|AEE78883.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
Length = 365
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/56 (71%), Positives = 52/56 (92%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
MASFGMEDFA+K+G L+P+QFVD+I+L GDK+DNIPGV+GIG+V AV+LI++FG L
Sbjct: 278 MASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTL 333
>gi|357475547|ref|XP_003608059.1| DNA polymerase I [Medicago truncatula]
gi|355509114|gb|AES90256.1| DNA polymerase I [Medicago truncatula]
Length = 491
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 52/64 (81%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
M SFG EDFA ++G LKPSQFVD+I+L GD++DNIPGV GIGDV AVQLI+KFG ++ +
Sbjct: 317 MVSFGAEDFAERFGGLKPSQFVDMIALSGDRSDNIPGVNGIGDVYAVQLISKFGEVLHCI 376
Query: 61 ECFS 64
C S
Sbjct: 377 FCMS 380
>gi|224121808|ref|XP_002330658.1| predicted protein [Populus trichocarpa]
gi|222872262|gb|EEF09393.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
M SFGMEDFA KYG LKPSQFVDV++L+GDK+DNIPGVEGIG V AV+LI++FG L +
Sbjct: 159 MVSFGMEDFAEKYGGLKPSQFVDVMALMGDKSDNIPGVEGIGVVHAVELISRFGTLENLL 218
Query: 61 ECFSEM 66
+C ++
Sbjct: 219 KCVDQV 224
>gi|449516928|ref|XP_004165498.1| PREDICTED: DNA polymerase I, thermostable-like [Cucumis sativus]
Length = 283
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
M SFG+EDFA K+G L+PSQFVDV+SLVGDK+DNIPGV+GIG+V AVQLIT+FG L NV
Sbjct: 115 MVSFGLEDFADKFGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGKLT-NV 173
Query: 61 E 61
E
Sbjct: 174 E 174
>gi|226530274|ref|NP_001151880.1| DNA polymerase I [Zea mays]
gi|195650551|gb|ACG44743.1| DNA polymerase I [Zea mays]
Length = 422
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/56 (73%), Positives = 49/56 (87%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDF ++YG LKPSQFVDV++L G KADNIPGVEGIGD+ AV+LI+KFG L
Sbjct: 272 MVSFGVEDFVKRYGPLKPSQFVDVVALSGYKADNIPGVEGIGDINAVKLISKFGSL 327
>gi|356519672|ref|XP_003528494.1| PREDICTED: DNA polymerase I, thermostable-like [Glycine max]
Length = 436
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 39/56 (69%), Positives = 47/56 (83%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDF +YG LKPSQF D+I+L GD++DNIPGV GIGDV AVQLI++FG L
Sbjct: 285 MVSFGVEDFEERYGGLKPSQFADMIALTGDRSDNIPGVHGIGDVHAVQLISRFGTL 340
>gi|356502746|ref|XP_003520177.1| PREDICTED: DNA polymerase I, thermostable-like [Glycine max]
Length = 444
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/56 (67%), Positives = 47/56 (83%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M SFG+EDF +YG LKPSQF D+I+L GD++DNIPGV GIGDV AVQL+++FG L
Sbjct: 293 MVSFGVEDFEERYGGLKPSQFADMIALTGDRSDNIPGVHGIGDVHAVQLLSRFGTL 348
>gi|148906869|gb|ABR16580.1| unknown [Picea sitchensis]
Length = 400
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ASFG+E FA KYG+LKPSQ VDV++L GD AD IPGV GIGD+ A++LI KFG L
Sbjct: 289 IASFGVEQFAEKYGDLKPSQIVDVMALAGDNADFIPGVHGIGDMNALKLIIKFGSL 344
>gi|147858394|emb|CAN81408.1| hypothetical protein VITISV_010447 [Vitis vinifera]
Length = 734
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 49/115 (42%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIP------------------------ 36
M SFGMEDFA++YG L+PSQFVDVISLVGDK+DNIP
Sbjct: 534 MTSFGMEDFAKRYGNLEPSQFVDVISLVGDKSDNIPGSFVLIMVKDPIENIPIEKLVSDI 593
Query: 37 -------------------------GVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
GVEGIG+V AVQLITKFG L ++C ++
Sbjct: 594 VVFFFLYCKSEQSDPRILRIVLLGNGVEGIGNVHAVQLITKFGTLENLLQCVDQV 648
>gi|302802031|ref|XP_002982771.1| hypothetical protein SELMODRAFT_54861 [Selaginella moellendorffii]
gi|300149361|gb|EFJ16016.1| hypothetical protein SELMODRAFT_54861 [Selaginella moellendorffii]
Length = 363
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 19/73 (26%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIP-------------------GVEGI 41
M SFGME+F+ ++G L+P+QFVDV+SL+GD DNIP G+ GI
Sbjct: 192 MVSFGMEEFSARFGSLEPAQFVDVLSLIGDTCDNIPGKYYHTIDSRLRSITCNIAGIPGI 251
Query: 42 GDVRAVQLITKFG 54
G+ A++LITKFG
Sbjct: 252 GEKTAIELITKFG 264
>gi|302818496|ref|XP_002990921.1| hypothetical protein SELMODRAFT_44782 [Selaginella moellendorffii]
gi|300141252|gb|EFJ07965.1| hypothetical protein SELMODRAFT_44782 [Selaginella moellendorffii]
Length = 363
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 19/73 (26%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIP-------------------GVEGI 41
M SFGME+F+ ++G L+P+QFVDV+SL+GD DNIP G+ GI
Sbjct: 192 MVSFGMEEFSARFGSLEPAQFVDVLSLIGDTCDNIPGKYYHTIDSRLRSITCNIAGIPGI 251
Query: 42 GDVRAVQLITKFG 54
G+ A++LITKFG
Sbjct: 252 GEKTAIELITKFG 264
>gi|4678934|emb|CAB41325.1| putative protein [Arabidopsis thaliana]
Length = 384
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/37 (75%), Positives = 35/37 (94%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPG 37
MASFGMEDFA+K+G L+P+QFVD+I+L GDK+DNIPG
Sbjct: 274 MASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPG 310
>gi|110741816|dbj|BAE98851.1| hypothetical protein [Arabidopsis thaliana]
Length = 131
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 35/37 (94%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPG 37
MASFGMEDFA+K+G L+P+QFVD+I+L GDK+DNIPG
Sbjct: 95 MASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPG 131
>gi|168027127|ref|XP_001766082.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682725|gb|EDQ69141.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 310
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 47/56 (83%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ FG+++F +++G+++P Q+++V++L+GDK DNIPG+ G+G+V A++L+ ++G +
Sbjct: 160 IVPFGVKEFQKRFGDIQPWQYLEVLALMGDKVDNIPGLPGVGEVTALKLVKEYGTV 215
>gi|4731571|gb|AAD28505.1|AF121780_1 DNA polymerase I [Rhodothermus marinus]
Length = 924
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+E F YG L+P QF+DV++L+GD +DN+PGV GIG+ AVQLI ++G
Sbjct: 165 IETFRETYG-LEPHQFIDVLALMGDPSDNVPGVPGIGEKTAVQLIQQYG 212
>gi|345303265|ref|YP_004825167.1| DNA polymerase I [Rhodothermus marinus SG0.5JP17-172]
gi|345112498|gb|AEN73330.1| DNA polymerase I [Rhodothermus marinus SG0.5JP17-172]
Length = 945
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+E F YG L+P QF+DV++L+GD +DN+PGV GIG+ AVQLI ++G
Sbjct: 186 IETFRETYG-LEPHQFIDVLALMGDPSDNVPGVPGIGEKTAVQLIQQYG 233
>gi|268316907|ref|YP_003290626.1| DNA polymerase I [Rhodothermus marinus DSM 4252]
gi|262334441|gb|ACY48238.1| DNA polymerase I [Rhodothermus marinus DSM 4252]
Length = 924
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+E F YG L+P QF+DV++L+GD +DN+PGV GIG+ AVQLI ++G
Sbjct: 165 IETFRETYG-LEPHQFIDVLALMGDPSDNVPGVPGIGEKTAVQLIQQYG 212
>gi|4090935|gb|AAC98908.1| DNA polymerase type I [Rhodothermus sp. 'ITI 518']
Length = 924
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+E F YG L+P QF+DV++L+GD +DN+PGV GIG+ AVQLI ++G
Sbjct: 165 IETFRETYG-LEPHQFIDVLALMGDPSDNVPGVPGIGEKTAVQLIQQYG 212
>gi|119512517|ref|ZP_01631596.1| DNA polymerase I [Nodularia spumigena CCY9414]
gi|119462824|gb|EAW43782.1| DNA polymerase I [Nodularia spumigena CCY9414]
Length = 970
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F +E+ K G L P+Q VD +L GDK+DNIPGV GIG+ AVQL+TK+G L
Sbjct: 179 ITEFSIEEVKAKLGVL-PTQIVDYKALCGDKSDNIPGVRGIGEKTAVQLLTKYGSL 233
>gi|407477882|ref|YP_006791759.1| DNA polymerase I [Exiguobacterium antarcticum B7]
gi|407061961|gb|AFS71151.1| DNA polymerase I [Exiguobacterium antarcticum B7]
Length = 865
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
E FA YG LKP Q +D+ L+GDK+DNIPGV GIG+ A++LI+ +G
Sbjct: 162 ELFAETYGGLKPMQMIDLKGLMGDKSDNIPGVPGIGEKTAIKLISAYG 209
>gi|218288809|ref|ZP_03493072.1| DNA polymerase I [Alicyclobacillus acidocaldarius LAA1]
gi|218241167|gb|EED08343.1| DNA polymerase I [Alicyclobacillus acidocaldarius LAA1]
Length = 974
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M F + AR+Y LKP+Q +D+ L+GD +DNIPGV G+G+ A++L+T FG +
Sbjct: 248 MEHFDEQAVARRYPGLKPAQVIDLKGLMGDPSDNIPGVPGVGEKTALKLLTSFGTV 303
>gi|172058211|ref|YP_001814671.1| DNA polymerase I [Exiguobacterium sibiricum 255-15]
gi|171990732|gb|ACB61654.1| DNA polymerase I [Exiguobacterium sibiricum 255-15]
Length = 865
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
E FA YG LKP Q +D+ L+GDK+DNIPGV GIG+ A++LI+ +G
Sbjct: 162 ELFAETYGGLKPIQMIDLKGLMGDKSDNIPGVPGIGEKTAIKLISAYG 209
>gi|452823946|gb|EME30952.1| DNA polymerase I [Galdieria sulphuraria]
Length = 1050
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVE 61
+F + Y L P Q+ DV++L+GD ADNIPGV GIG+ +AV L+ FG + VE
Sbjct: 242 EFRQAYDNLSPMQYCDVLALMGDTADNIPGVAGIGEKQAVALVKSFGCVETLVE 295
>gi|317504364|ref|ZP_07962348.1| DNA-directed DNA polymerase I [Prevotella salivae DSM 15606]
gi|315664486|gb|EFV04169.1| DNA-directed DNA polymerase I [Prevotella salivae DSM 15606]
Length = 920
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ A KYG KP Q +D+++L+GD ADN PG G+G+ AV+LI +FG +
Sbjct: 160 GEQEIAEKYGINKPEQVIDLLALMGDSADNFPGCPGVGEKTAVKLINEFGSI 211
>gi|307105571|gb|EFN53820.1| hypothetical protein CHLNCDRAFT_136540 [Chlorella variabilis]
Length = 293
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ + DF +YG L+P QFVDV++L GD +DN+PGV GIG AV L+ + G L +
Sbjct: 148 LVPYSQTDFENEYG-LQPEQFVDVLALAGDASDNVPGVAGIGPKTAVALLKQHGTLENLI 206
Query: 61 ECFSEM 66
E +E+
Sbjct: 207 EHAAEV 212
>gi|115424490|dbj|BAF33373.1| DNA polymerase I [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 942
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M F + AR+Y LKP+Q +D+ L+GD +DNIPGV G+G+ A++L+ FG +
Sbjct: 216 MEHFDEQAVARRYPGLKPAQVIDLKGLMGDPSDNIPGVPGVGEKTALKLLASFGTV 271
>gi|255081196|ref|XP_002507820.1| predicted protein [Micromonas sp. RCC299]
gi|226523096|gb|ACO69078.1| predicted protein [Micromonas sp. RCC299]
Length = 223
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + DF ++G L P+QFVD++++VGD +DNIPGVEGIG A +L+ ++G
Sbjct: 151 LVPYTERDFRAEFGGLDPAQFVDLLAMVGDSSDNIPGVEGIGPKTAPKLLGEYG 204
>gi|428311386|ref|YP_007122363.1| DNA polymerase I [Microcoleus sp. PCC 7113]
gi|428252998|gb|AFZ18957.1| DNA polymerase I [Microcoleus sp. PCC 7113]
Length = 1095
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG E +K G + P Q VD +L GDK+DNIPGV+GIGD AVQL+ ++G L
Sbjct: 193 FGPEQVKQKLG-IFPHQVVDYKALCGDKSDNIPGVKGIGDKTAVQLLERYGSL 244
>gi|258512307|ref|YP_003185741.1| DNA polymerase I [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479033|gb|ACV59352.1| DNA polymerase I [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 895
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M F + AR+Y LKP+Q +D+ L+GD +DNIPGV G+G+ A++L+ FG +
Sbjct: 169 MEHFDEQAVARRYPGLKPAQVIDLKGLMGDPSDNIPGVPGVGEKTALKLLASFGTV 224
>gi|322417979|ref|YP_004197202.1| DNA polymerase I [Geobacter sp. M18]
gi|320124366|gb|ADW11926.1| DNA polymerase I [Geobacter sp. M18]
Length = 892
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
SFG+ D K+G + P + VDV++L GD +DNIPGV GIG+V A +L+ +FG L
Sbjct: 158 SFGIPDVHEKFG-VGPGRVVDVLALWGDTSDNIPGVPGIGEVTAKKLMQEFGTL 210
>gi|384136328|ref|YP_005519042.1| DNA polymerase I [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290414|gb|AEJ44524.1| DNA polymerase I [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 884
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M F + AR+Y LKP+Q +D+ L+GD +DNIPGV G+G+ A++L+ FG +
Sbjct: 158 MEHFDEQAVARRYPGLKPAQVIDLKGLMGDPSDNIPGVPGVGEKTALKLLASFGTV 213
>gi|220906286|ref|YP_002481597.1| DNA polymerase I [Cyanothece sp. PCC 7425]
gi|219862897|gb|ACL43236.1| DNA polymerase I [Cyanothece sp. PCC 7425]
Length = 982
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG E K G L PSQ VD +L GD +DNIPGV GIG AVQL+++FG L
Sbjct: 190 FGTEQVKEKLGIL-PSQVVDYKALCGDSSDNIPGVRGIGPKTAVQLLSQFGSL 241
>gi|412993369|emb|CCO16902.1| DNA polymerase I [Bathycoccus prasinos]
Length = 403
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 2 ASFGMEDFARKYGEL-KPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
++F + +FA+ + EL +P QFVD ++LVGD +DN+PGVEG+G A +L+ K+
Sbjct: 252 SAFTLREFAKTHEELIQPEQFVDFLALVGDSSDNVPGVEGVGPKTARKLLNKYA 305
>gi|197116765|ref|YP_002137192.1| DNA polymerase I [Geobacter bemidjiensis Bem]
gi|197086125|gb|ACH37396.1| DNA polymerase I [Geobacter bemidjiensis Bem]
Length = 892
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
SFG+ D K+G + P + VDV++L GD +DNIPGV GIG+V A +L+ +FG L
Sbjct: 158 SFGIADVYEKFG-VAPERVVDVLALWGDASDNIPGVPGIGEVTAKKLLQEFGSL 210
>gi|281424796|ref|ZP_06255709.1| DNA polymerase type I [Prevotella oris F0302]
gi|281401166|gb|EFB31997.1| DNA polymerase type I [Prevotella oris F0302]
Length = 920
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ A KYG P+Q +D+++L+GD ADN PG G+G+ AV+LI +FG +
Sbjct: 160 GEQEIAEKYGISTPAQVIDLLALMGDSADNFPGCPGVGEKTAVKLINEFGSI 211
>gi|299142040|ref|ZP_07035174.1| DNA polymerase type I [Prevotella oris C735]
gi|298576502|gb|EFI48374.1| DNA polymerase type I [Prevotella oris C735]
Length = 920
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ A KYG P+Q +D+++L+GD ADN PG G+G+ AV+LI +FG +
Sbjct: 160 GEQEIAEKYGISTPAQVIDLLALMGDSADNFPGCPGVGEKTAVKLINEFGSI 211
>gi|373460588|ref|ZP_09552339.1| DNA polymerase I [Prevotella maculosa OT 289]
gi|371955206|gb|EHO73010.1| DNA polymerase I [Prevotella maculosa OT 289]
Length = 920
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G + A KYG P+Q +D+++L+GD ADN PG GIG+ AV+LI +FG
Sbjct: 160 GEHEIAEKYGISTPAQVIDLLALMGDSADNFPGCPGIGEKTAVKLINEFG 209
>gi|427717211|ref|YP_007065205.1| DNA polymerase I [Calothrix sp. PCC 7507]
gi|427349647|gb|AFY32371.1| DNA polymerase I [Calothrix sp. PCC 7507]
Length = 1036
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ FG E K G L PSQ VD +L GDK+DNIPGV GIG+ AVQL+ +G L
Sbjct: 179 ITEFGPEQVQEKMGIL-PSQVVDFKALCGDKSDNIPGVRGIGEKTAVQLLKAYGSL 233
>gi|261749394|ref|YP_003257079.1| DNA polymerase I [Blattabacterium sp. (Periplaneta americana) str.
BPLAN]
gi|261497486|gb|ACX83936.1| DNA polymerase I [Blattabacterium sp. (Periplaneta americana) str.
BPLAN]
Length = 305
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ +K+G ++P Q +D+ S++GD +DNIPG+ GIG+ A + I K+G L
Sbjct: 164 LGIEEIKKKFGVIEPKQVIDLWSMMGDSSDNIPGLPGIGEKYARKFIQKYGSL 216
>gi|404328596|ref|ZP_10969044.1| DNA polymerase I [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 877
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 39/53 (73%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ ++ ++YG LKPS +D+ L+GD +DNIPGV G+G+ AV+L+++FG +
Sbjct: 159 YNVDQVGQRYGGLKPSGVIDLKGLMGDASDNIPGVPGVGEKTAVKLLSRFGTV 211
>gi|406957563|gb|EKD85472.1| hypothetical protein ACD_38C00018G0011, partial [uncultured
bacterium]
Length = 286
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+G+E+F KYG P+Q D L GD +DNIPGV GIGDV A +LI +F
Sbjct: 168 YGVEEFVAKYG-FYPAQLTDYKGLAGDASDNIPGVAGIGDVTATKLIHQF 216
>gi|325970645|ref|YP_004246836.1| DNA polymerase I [Sphaerochaeta globus str. Buddy]
gi|324025883|gb|ADY12642.1| DNA polymerase I [Sphaerochaeta globus str. Buddy]
Length = 948
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ +YG +KPSQ VD +SL+GD +DN+PGV+GIG+ A +L+ +FG L
Sbjct: 206 GCKEVEEEYG-IKPSQIVDYLSLLGDSSDNVPGVKGIGEKGAAKLLQQFGSL 256
>gi|806281|gb|AAC37139.1| DNA polymerase I [Geobacillus stearothermophilus]
Length = 876
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ S+ E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 157 IESYTPETVVEKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 211
>gi|354565960|ref|ZP_08985133.1| DNA polymerase I [Fischerella sp. JSC-11]
gi|353546468|gb|EHC15916.1| DNA polymerase I [Fischerella sp. JSC-11]
Length = 983
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++ FG + K G L PSQ +D +L GDK+DNIPGV+GIG+ AVQL+ +G L
Sbjct: 184 ISEFGEAEVKEKLGIL-PSQVIDFKALCGDKSDNIPGVKGIGEKTAVQLLNTYGSL 238
>gi|3041672|sp|P52026.2|DPO1_BACST RecName: Full=DNA polymerase I; Short=POL I
Length = 876
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ S+ E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 157 IESYTPETVVEKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 211
>gi|444335597|ref|YP_007391966.1| DNA polymerase I [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
gi|444299976|gb|AGD98213.1| DNA polymerase I [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
Length = 300
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ +K+G ++P Q +D+ S++GD +DNIPG+ GIG+ A + I K+G L
Sbjct: 164 LGIEEIKKKFGVIEPKQVIDLWSMMGDSSDNIPGLPGIGEKYARKFIQKYGSL 216
>gi|319892738|ref|YP_004149613.1| DNA polymerase I [Staphylococcus pseudintermedius HKU10-03]
gi|317162434|gb|ADV05977.1| DNA polymerase I [Staphylococcus pseudintermedius HKU10-03]
Length = 875
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A KY LKPSQ +D+ L+GD +DNIPGV G+G+ A++L+ +FG +
Sbjct: 165 AEKYNGLKPSQIIDLKGLMGDSSDNIPGVAGVGEKTAMKLLNQFGTV 211
>gi|383763177|ref|YP_005442159.1| DNA polymerase I [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381383445|dbj|BAM00262.1| DNA polymerase I [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 955
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+E +YG L P QF+D +L GD +DNIPGV G+G+ A++L+ ++G +
Sbjct: 180 YGIEQIQERYG-LTPQQFIDFKALTGDSSDNIPGVPGVGEKTAIKLLQQYGSI 231
>gi|386319059|ref|YP_006015222.1| DNA polymerase I [Staphylococcus pseudintermedius ED99]
gi|323464230|gb|ADX76383.1| DNA polymerase I [Staphylococcus pseudintermedius ED99]
Length = 875
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A KY LKPSQ +D+ L+GD +DNIPGV G+G+ A++L+ +FG +
Sbjct: 165 AEKYNGLKPSQIIDLKGLMGDSSDNIPGVAGVGEKTAMKLLNQFGTV 211
>gi|172037170|ref|YP_001803671.1| DNA polymerase I [Cyanothece sp. ATCC 51142]
gi|354555934|ref|ZP_08975233.1| DNA polymerase I [Cyanothece sp. ATCC 51472]
gi|171698624|gb|ACB51605.1| DNA polymerase I [Cyanothece sp. ATCC 51142]
gi|353552258|gb|EHC21655.1| DNA polymerase I [Cyanothece sp. ATCC 51472]
Length = 970
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML--VFN 59
F +E K G +KP+Q +D +L GDK+DNIPGV GIG+ AV+L++++G L V+N
Sbjct: 178 FNVEAVTEKMG-IKPTQVIDYKALCGDKSDNIPGVRGIGEKTAVKLLSEYGTLEAVYN 234
>gi|392955999|ref|ZP_10321529.1| DNA polymerase I [Bacillus macauensis ZFHKF-1]
gi|391878241|gb|EIT86831.1| DNA polymerase I [Bacillus macauensis ZFHKF-1]
Length = 293
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
++ + F ++YG + PSQ+VDV +L+GDK+DNIPGV G+G+ A+ L+ ++G
Sbjct: 166 NYSLAHFQQEYG-IDPSQWVDVKALLGDKSDNIPGVAGVGEKAALPLVQQYG 216
>gi|338730077|ref|YP_004659469.1| DNA polymerase I [Thermotoga thermarum DSM 5069]
gi|335364428|gb|AEH50373.1| DNA polymerase I [Thermotoga thermarum DSM 5069]
Length = 893
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F + ++G ++PSQ VD+++L+GD DN+PGV+GIG+ AV+L+TK+G +
Sbjct: 162 FDAKKVKERFG-VEPSQIVDLLALIGDSVDNVPGVKGIGEKTAVELVTKYGSI 213
>gi|313682518|ref|YP_004060256.1| DNA polymerase i [Sulfuricurvum kujiense DSM 16994]
gi|313155378|gb|ADR34056.1| DNA polymerase I [Sulfuricurvum kujiense DSM 16994]
Length = 909
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P QF+D SL+GD ADN+PGV+GIG V A +L+++FG L
Sbjct: 166 KYG-VHPCQFIDYQSLIGDTADNVPGVKGIGKVTAQKLLSQFGTL 209
>gi|404487040|ref|ZP_11022227.1| DNA polymerase I [Barnesiella intestinihominis YIT 11860]
gi|404335536|gb|EJZ62005.1| DNA polymerase I [Barnesiella intestinihominis YIT 11860]
Length = 926
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G E+ KYG P Q +D++ L+GD +DNIPG G+G+ AV+LI FG
Sbjct: 162 LGPEEIKTKYGIQSPEQVIDILGLMGDSSDNIPGCPGVGEKTAVKLIADFG 212
>gi|212550625|ref|YP_002308942.1| DNA polymerase I [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548863|dbj|BAG83531.1| DNA polymerase I [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 928
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+++ KYG + P Q +D + L+GD +DNIPG GIG++ A +LI +FG +
Sbjct: 159 LGVKEIKEKYGFISPIQMIDFLGLMGDSSDNIPGCPGIGEITAKKLIARFGSI 211
>gi|406834811|ref|ZP_11094405.1| DNA polymerase I [Schlesneria paludicola DSM 18645]
Length = 634
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG KY E+KP QF D ++LV DK D +PGV+GIG +AV+L+ K+G L
Sbjct: 344 FGRAQVLEKY-EVKPEQFGDYLALVSDKTDGVPGVKGIGPKKAVELLGKYGNL 395
>gi|258648865|ref|ZP_05736334.1| DNA polymerase type I [Prevotella tannerae ATCC 51259]
gi|260850887|gb|EEX70756.1| DNA polymerase type I [Prevotella tannerae ATCC 51259]
Length = 921
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ +KYG P Q +D ++L+GD ADNIPG G+G A LI +FG +
Sbjct: 161 LGVEEVCQKYGLTDPKQVIDYLALMGDAADNIPGCPGVGPKTATTLIQRFGSI 213
>gi|253698996|ref|YP_003020185.1| DNA polymerase I [Geobacter sp. M21]
gi|251773846|gb|ACT16427.1| DNA polymerase I [Geobacter sp. M21]
Length = 892
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
SFG+ + K+G + P + VDV++L GD +DNIPGV GIG+V A +L+ +FG L
Sbjct: 158 SFGIAEVYEKFG-VAPERVVDVLALWGDASDNIPGVPGIGEVTAKKLLQEFGSL 210
>gi|755588|gb|AAA85558.1| DNA polymerase [Geobacillus stearothermophilus]
Length = 954
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ S+ E KYG L P Q VD+ L+GDK+DNIPGV GIG AV+L+ +FG +
Sbjct: 233 IESYTPETVVEKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGKKTAVKLLKQFGTV 287
>gi|427708986|ref|YP_007051363.1| DNA polymerase I [Nostoc sp. PCC 7107]
gi|427361491|gb|AFY44213.1| DNA polymerase I [Nostoc sp. PCC 7107]
Length = 972
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E K G L P+Q VD +L GDK+DNIPGV GIG+ AVQL++ +G L
Sbjct: 179 ITEFSTEQVKEKLGVL-PTQIVDFKALCGDKSDNIPGVRGIGEKTAVQLLSTYGSL 233
>gi|302039429|ref|YP_003799751.1| DNA polymerase I [Candidatus Nitrospira defluvii]
gi|300607493|emb|CBK43826.1| DNA polymerase I [Candidatus Nitrospira defluvii]
Length = 881
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG D ++G ++P++ V+++ L+GD +DNIPGV+GIG+ AV+LIT+FG +
Sbjct: 155 FGEADSQGRFG-VEPARVVEIMGLMGDTSDNIPGVKGIGEKTAVKLITQFGTI 206
>gi|411117332|ref|ZP_11389819.1| DNA polymerase I [Oscillatoriales cyanobacterium JSC-12]
gi|410713435|gb|EKQ70936.1| DNA polymerase I [Oscillatoriales cyanobacterium JSC-12]
Length = 972
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ +G + K G L PSQ VD +L GD +DNIPGV GIG+ AVQL+T++G L
Sbjct: 172 LKEYGSAEVKAKMGIL-PSQVVDFKALCGDSSDNIPGVRGIGEKTAVQLLTQYGSL 226
>gi|257457843|ref|ZP_05623002.1| DNA polymerase I [Treponema vincentii ATCC 35580]
gi|257444556|gb|EEV19640.1| DNA polymerase I [Treponema vincentii ATCC 35580]
Length = 951
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+A G+E+ +G + P+Q +D +SL+GD ADNIPGV+GIG AV+L+ +G L
Sbjct: 162 LAQCGVEEVKAHWG-VAPAQMLDYLSLIGDSADNIPGVKGIGPKTAVKLLQDYGTL 216
>gi|346224772|ref|ZP_08845914.1| DNA polymerase I [Anaerophaga thermohalophila DSM 12881]
Length = 921
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ +G+++ +K+G P Q +D+++L GD ADNIPG GIG+ RA +I+K+G +
Sbjct: 162 IEEWGIDEIRKKFGVENPGQVIDLLALWGDSADNIPGCPGIGEKRAKDIISKYGSI 217
>gi|374814633|ref|ZP_09718370.1| DNA polymerase I [Treponema primitia ZAS-1]
Length = 975
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ ++G + P + +D++SL GD +DN+PGV+G+GDV AV+L+ ++G L
Sbjct: 195 GVEEVKLEWG-VNPDRVLDLLSLTGDTSDNVPGVKGVGDVTAVKLMARYGSL 245
>gi|85003083|gb|ABC68603.1| DNA polymerase I [Geobacillus caldoxylosilyticus]
Length = 878
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
S+ E KYG L P Q +D+ L+GDK+DNIPGV GIG+ AV+L+ +FG
Sbjct: 161 SYTPETVREKYG-LTPEQIIDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFG 211
>gi|262341095|ref|YP_003283950.1| DNA polymerase I [Blattabacterium sp. (Blattella germanica) str.
Bge]
gi|262272432|gb|ACY40340.1| DNA polymerase I [Blattabacterium sp. (Blattella germanica) str.
Bge]
Length = 297
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG+E+ K+G P Q +D+ S++GD +DNIPG+ GIG+ A + I K+G +
Sbjct: 166 FGIEEIKEKFGVNHPKQVIDLWSMMGDPSDNIPGLPGIGEKNAKKFIQKYGSI 218
>gi|328947359|ref|YP_004364696.1| DNA polymerase I [Treponema succinifaciens DSM 2489]
gi|328447683|gb|AEB13399.1| DNA polymerase I [Treponema succinifaciens DSM 2489]
Length = 929
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ K+G + P + +D +SLVGD +DN+PGV+G+GD A++L+T++G L
Sbjct: 169 GAQEVLEKWG-IPPEKILDYLSLVGDASDNVPGVKGVGDKTAIKLLTQYGTL 219
>gi|261366357|ref|ZP_05979240.1| DNA polymerase I [Subdoligranulum variabile DSM 15176]
gi|282571960|gb|EFB77495.1| DNA-directed DNA polymerase [Subdoligranulum variabile DSM 15176]
Length = 837
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P+Q +DV SL+GD +DNIPGV GIG+ A+ L+ KFG L
Sbjct: 164 KYG-VTPAQLIDVKSLMGDSSDNIPGVPGIGEKTALALVQKFGSL 207
>gi|410995808|gb|AFV97273.1| hypothetical protein B649_04795 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 911
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P QF+D SL+GD ADN+PGV+GIG V A +L+ +FG L
Sbjct: 166 KYG-VHPRQFIDYQSLIGDTADNVPGVKGIGKVTAQKLLEQFGTL 209
>gi|338810642|ref|ZP_08622884.1| DNA polymerase I [Acetonema longum DSM 6540]
gi|337277387|gb|EGO65782.1| DNA polymerase I [Acetonema longum DSM 6540]
Length = 872
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
F E F KYG + P QF+D+ L+GD +DNIPGV GIG+ A++L+ +FG
Sbjct: 160 FNPETFFAKYG-ITPKQFIDMKGLMGDPSDNIPGVAGIGEKTALKLLQQFG 209
>gi|186686230|ref|YP_001869426.1| DNA polymerase I [Nostoc punctiforme PCC 73102]
gi|186468682|gb|ACC84483.1| DNA polymerase I [Nostoc punctiforme PCC 73102]
Length = 978
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E K G L PSQ +D +L GDK+DNIPGV+GIG+ AVQL+ +G L
Sbjct: 179 ITEFEAEQVKEKMGVL-PSQIIDFKALCGDKSDNIPGVKGIGEKTAVQLLNTYGSL 233
>gi|88697143|gb|ABD48716.1| thermostable DNA polymerase I [Geobacillus sp. LH8]
Length = 876
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 163 ETVEEKYG-LTPEQMVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 211
>gi|82395938|gb|ABB72056.1| thermostable DNA polymerase I [Geobacillus sp. MKK-2005]
Length = 876
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 163 ETVEEKYG-LTPEQMVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 211
>gi|148657518|ref|YP_001277723.1| DNA polymerase I [Roseiflexus sp. RS-1]
gi|148569628|gb|ABQ91773.1| DNA polymerase I [Roseiflexus sp. RS-1]
Length = 965
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+ D +Y L+P Q D+ L GD +DNIPGV+GIG+ A+ L+ +FG +
Sbjct: 167 YGVADVCARYKGLRPDQLADLRGLKGDPSDNIPGVKGIGEAGAIALLNQFGSI 219
>gi|209360708|gb|ACI43006.1| DNA polymerase I [Anoxybacillus sp. NB]
Length = 878
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 ETVEEKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 213
>gi|209360706|gb|ACI43005.1| DNA polymerase I [Geobacillus kaue]
Length = 878
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 ETVEEKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 213
>gi|209360704|gb|ACI43004.1| DNA polymerase I [Geobacillus anatolicus]
Length = 878
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 ETVEEKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 213
>gi|209360698|gb|ACI43001.1| DNA polymerase I [Geobacillus kaue]
Length = 878
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 ETVEEKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 213
>gi|209360700|gb|ACI43002.1| DNA polymerase I [Geobacillus bogazici]
Length = 878
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 ETVEEKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 213
>gi|110630020|gb|ABG80522.1| DNA polymerase I [Geobacillus anatolicus]
gi|209360702|gb|ACI43003.1| DNA polymerase I [Geobacillus kaue]
Length = 878
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 ETVEEKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 213
>gi|157737513|ref|YP_001490196.1| DNA polymerase I [Arcobacter butzleri RM4018]
gi|157699367|gb|ABV67527.1| DNA polymerase I [Arcobacter butzleri RM4018]
Length = 896
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG +KPSQF D SL+GD ADNIPGV+G+G A LI +FG L
Sbjct: 161 EKCIEKYG-VKPSQFTDYQSLLGDTADNIPGVKGVGAKTAESLIKEFGTL 209
>gi|384155897|ref|YP_005538712.1| DNA polymerase I [Arcobacter butzleri ED-1]
gi|345469451|dbj|BAK70902.1| DNA polymerase I [Arcobacter butzleri ED-1]
Length = 896
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG +KPSQF D SL+GD ADNIPGV+G+G A LI +FG L
Sbjct: 161 EKCIEKYG-VKPSQFTDYQSLLGDTADNIPGVKGVGAKTAESLIKEFGTL 209
>gi|119494050|ref|ZP_01624605.1| DNA polymerase I [Lyngbya sp. PCC 8106]
gi|119452218|gb|EAW33419.1| DNA polymerase I [Lyngbya sp. PCC 8106]
Length = 927
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++KP Q +D +L GDK+DNIPGV GIGD AVQL++++ L
Sbjct: 131 QIKPEQLIDYKALCGDKSDNIPGVRGIGDKTAVQLLSEYNSL 172
>gi|315637294|ref|ZP_07892513.1| DNA-directed DNA polymerase I [Arcobacter butzleri JV22]
gi|315478458|gb|EFU69172.1| DNA-directed DNA polymerase I [Arcobacter butzleri JV22]
Length = 896
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG +KPSQF D SL+GD ADNIPGV+G+G A LI +FG L
Sbjct: 161 EKCIEKYG-VKPSQFTDYQSLLGDTADNIPGVKGVGAKTAESLIKEFGTL 209
>gi|427734772|ref|YP_007054316.1| DNA polymerase I [Rivularia sp. PCC 7116]
gi|427369813|gb|AFY53769.1| DNA polymerase I [Rivularia sp. PCC 7116]
Length = 976
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E+ K G L P+Q VD +L GDK+DNIPGV+GIG+ AVQL+ +G L
Sbjct: 186 LKEFHSEEVKEKLGVL-PTQVVDFKALCGDKSDNIPGVKGIGEKTAVQLLDTYGTL 240
>gi|2231821|gb|AAB62092.1| DNA polymerase I [Geobacillus stearothermophilus]
Length = 877
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 ETVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 213
>gi|416396687|ref|ZP_11686470.1| DNA polymerase I [Crocosphaera watsonii WH 0003]
gi|357262941|gb|EHJ12014.1| DNA polymerase I [Crocosphaera watsonii WH 0003]
Length = 970
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML--VFN 59
F +D K G +KP+Q +D +L GDK+DNIPG+ GIGD AV+L+ ++ L V+N
Sbjct: 178 FKFDDVTEKMG-IKPTQVIDYKALCGDKSDNIPGIRGIGDKTAVKLLNEYETLEEVYN 234
>gi|119713448|gb|ABL97509.1| DNA polymerase A [uncultured marine bacterium HOT0_02H05]
Length = 970
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML--VFN 59
F +D K G +KP+Q +D +L GDK+DNIPG+ GIGD AV+L+ ++ L V+N
Sbjct: 178 FKFDDVTEKMG-IKPTQVIDYKALCGDKSDNIPGIRGIGDKTAVKLLNEYETLEEVYN 234
>gi|67923259|ref|ZP_00516744.1| DNA polymerase A [Crocosphaera watsonii WH 8501]
gi|67854885|gb|EAM50159.1| DNA polymerase A [Crocosphaera watsonii WH 8501]
Length = 970
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML--VFN 59
F +D K G +KP+Q +D +L GDK+DNIPG+ GIGD AV+L+ ++ L V+N
Sbjct: 178 FKFDDVTEKMG-IKPTQVIDYKALCGDKSDNIPGIRGIGDKTAVKLLNEYETLDEVYN 234
>gi|428305528|ref|YP_007142353.1| DNA polymerase I [Crinalium epipsammum PCC 9333]
gi|428247063|gb|AFZ12843.1| DNA polymerase I [Crinalium epipsammum PCC 9333]
Length = 993
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ +K G + P+Q VD +L GD +DNIPGV+GIGD AV+L+ ++G L
Sbjct: 193 GVEEVKQKLG-ITPAQVVDYKALCGDPSDNIPGVKGIGDKTAVKLLNEYGSL 243
>gi|138896291|ref|YP_001126744.1| DNA polymerase I [Geobacillus thermodenitrificans NG80-2]
gi|134267804|gb|ABO67999.1| DNA polymerase I [Geobacillus thermodenitrificans NG80-2]
Length = 878
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 ETVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 213
>gi|374290375|ref|YP_005037428.1| DNA polymerase I [Blattabacterium sp. (Cryptocercus punctulatus)
str. Cpu]
gi|358377167|gb|AEU09355.1| DNA polymerase I [Blattabacterium sp. (Cryptocercus punctulatus)
str. Cpu]
Length = 299
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+G P Q +D+ S++GD +DNIPG+ GIG+ A + I K+G L
Sbjct: 164 LGIEEIKEKFGVKNPKQVIDLWSMMGDNSDNIPGLPGIGEKNARKFIQKYGTL 216
>gi|196249912|ref|ZP_03148607.1| DNA polymerase I [Geobacillus sp. G11MC16]
gi|1205984|gb|AAB52611.1| DNA polymerase I [Geobacillus stearothermophilus]
gi|196210426|gb|EDY05190.1| DNA polymerase I [Geobacillus sp. G11MC16]
Length = 876
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 163 ETVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 211
>gi|83590675|ref|YP_430684.1| DNA polymerase I [Moorella thermoacetica ATCC 39073]
gi|83573589|gb|ABC20141.1| DNA polymerase I [Moorella thermoacetica ATCC 39073]
Length = 885
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E + YG L+P Q +DV +L+GD +DNIPGV G+G+ AVQL+ ++G L
Sbjct: 166 EAIKKNYG-LEPEQLIDVKALMGDASDNIPGVPGVGEKTAVQLVRQYGDL 214
>gi|260591949|ref|ZP_05857407.1| DNA polymerase type I [Prevotella veroralis F0319]
gi|260536233|gb|EEX18850.1| DNA polymerase type I [Prevotella veroralis F0319]
Length = 920
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ KYG P+Q +D+++L+GD ADN PG G+G+ A +LI++FG +
Sbjct: 158 TLGEKEVESKYGIPTPAQVIDILALMGDTADNFPGCPGVGEKTAAKLISQFGSI 211
>gi|428223606|ref|YP_007107703.1| DNA polymerase I [Geitlerinema sp. PCC 7407]
gi|427983507|gb|AFY64651.1| DNA polymerase I [Geitlerinema sp. PCC 7407]
Length = 961
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG ++ K G L PSQ VD +L GD +DNIPGV GIG AVQL+T +G L
Sbjct: 169 FGPQEVQAKLGIL-PSQVVDYKALCGDTSDNIPGVRGIGPKTAVQLLTTYGSL 220
>gi|371777453|ref|ZP_09483775.1| DNA polymerase I [Anaerophaga sp. HS1]
Length = 921
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ +G+E+ +K+ KP Q +D+++L GD ADNIPG GIG+ RA +I K+G +
Sbjct: 162 IEKWGVEEIKKKFSVEKPEQVIDLLALWGDSADNIPGCPGIGEKRAKIIIGKYGSI 217
>gi|375009844|ref|YP_004983477.1| DNA polymerase I [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288693|gb|AEV20377.1| DNA polymerase I [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 876
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 163 ETVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 211
>gi|320450017|ref|YP_004202113.1| DNA polymerase I, thermostable [Thermus scotoductus SA-01]
gi|320150186|gb|ADW21564.1| DNA polymerase I, thermostable [Thermus scotoductus SA-01]
Length = 830
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG LKPSQ+VD +L GD +DNIPGV+GIG+ A +LI ++G L
Sbjct: 168 KYG-LKPSQWVDYRALAGDPSDNIPGVKGIGEKTAAKLIREWGSL 211
>gi|210077503|gb|ACJ07016.1| PolI [Thermus sp. NMX2.A1]
Length = 830
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG LKPSQ+VD +L GD +DNIPGV+GIG+ A +LI ++G L
Sbjct: 168 KYG-LKPSQWVDYRALAGDPSDNIPGVKGIGEKTAAKLIREWGSL 211
>gi|298372616|ref|ZP_06982606.1| DNA polymerase type I [Bacteroidetes oral taxon 274 str. F0058]
gi|298275520|gb|EFI17071.1| DNA polymerase type I [Bacteroidetes oral taxon 274 str. F0058]
Length = 949
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ KYG P+Q +D++ L+GD +DNIPG G+G+ A +LI FG +
Sbjct: 168 LGVEEIKAKYGLDSPAQMIDLLGLMGDASDNIPGCPGVGEKTATKLIKDFGSI 220
>gi|443311788|ref|ZP_21041412.1| DNA polymerase I [Synechocystis sp. PCC 7509]
gi|442778188|gb|ELR88457.1| DNA polymerase I [Synechocystis sp. PCC 7509]
Length = 972
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 ASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ FG+E K G L PSQ VD +L GDK+DNIPGV GIG+ A QL+ + L
Sbjct: 180 SEFGIEQVQEKLGVL-PSQVVDFKALCGDKSDNIPGVRGIGEKTAAQLLKDYNNL 233
>gi|124262437|gb|ABM97416.1| DNA polymerase I [Bacillus sp. G(2006)]
Length = 876
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 163 ETVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTV 211
>gi|56421265|ref|YP_148583.1| DNA polymerase I [Geobacillus kaustophilus HTA426]
gi|56381107|dbj|BAD77015.1| DNA-directed DNA polymerase I [Geobacillus kaustophilus HTA426]
Length = 878
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 ETVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTV 213
>gi|297529110|ref|YP_003670385.1| DNA polymerase I [Geobacillus sp. C56-T3]
gi|297252362|gb|ADI25808.1| DNA polymerase I [Geobacillus sp. C56-T3]
Length = 876
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 163 ETVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTV 211
>gi|261418256|ref|YP_003251938.1| DNA polymerase I [Geobacillus sp. Y412MC61]
gi|319767784|ref|YP_004133285.1| DNA polymerase I [Geobacillus sp. Y412MC52]
gi|448239015|ref|YP_007403073.1| DNA polymerase I [Geobacillus sp. GHH01]
gi|261374713|gb|ACX77456.1| DNA polymerase I [Geobacillus sp. Y412MC61]
gi|317112650|gb|ADU95142.1| DNA polymerase I [Geobacillus sp. Y412MC52]
gi|445207857|gb|AGE23322.1| DNA polymerase I [Geobacillus sp. GHH01]
Length = 876
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 163 ETVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTV 211
>gi|308805154|ref|XP_003079889.1| DNA polymerase type I (ISS) [Ostreococcus tauri]
gi|116058346|emb|CAL53535.1| DNA polymerase type I (ISS) [Ostreococcus tauri]
Length = 322
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 4 FGMEDFARKYGE-LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F EDF + ++P+QF+D ++LVGD +DNIPGVEG+G A+ L+ ++G +
Sbjct: 179 FTEEDFRAMHNHVIEPAQFIDYLALVGDSSDNIPGVEGVGPKTALALLGEYGTI 232
>gi|239828008|ref|YP_002950632.1| DNA polymerase I [Geobacillus sp. WCH70]
gi|239808301|gb|ACS25366.1| DNA polymerase I [Geobacillus sp. WCH70]
Length = 878
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
S+ E KYG L P Q +D+ L+GDK+DNIPGV GIG+ A++L+ +FG +
Sbjct: 159 SYTPETVQEKYG-LTPEQIIDLKGLMGDKSDNIPGVPGIGEKTALKLLKEFGTI 211
>gi|435853194|ref|YP_007314513.1| DNA polymerase I [Halobacteroides halobius DSM 5150]
gi|433669605|gb|AGB40420.1| DNA polymerase I [Halobacteroides halobius DSM 5150]
Length = 856
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ ++ F Y EL P Q VD +L+GDK+DNIPGV+GIGD + +L+ +FG L
Sbjct: 162 YDVDKFREDY-ELDPEQLVDKKALMGDKSDNIPGVDGIGDKTSTKLLKEFGGL 213
>gi|144704831|gb|ABP02067.1| DNA polymerase [Bacillus caldolyticus]
Length = 878
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 EAVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 213
>gi|38146965|gb|AAR11867.1| DNA polymerase I [Bacillus caldolyticus]
Length = 878
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 165 EAVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTV 213
>gi|335049517|ref|ZP_08542507.1| DNA-directed DNA polymerase [Megasphaera sp. UPII 199-6]
gi|333762777|gb|EGL40262.1| DNA-directed DNA polymerase [Megasphaera sp. UPII 199-6]
Length = 857
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
M + E AR+YG P+Q +D+ +L+GD ADNIPGV G+G+ A++LI +FG
Sbjct: 157 MQAVTPEVMAREYG-YTPAQVIDMKALMGDTADNIPGVPGVGEKTALKLIQEFG 209
>gi|224476781|ref|YP_002634387.1| DNA polymerase I [Staphylococcus carnosus subsp. carnosus TM300]
gi|222421388|emb|CAL28202.1| DNA polymerase I [Staphylococcus carnosus subsp. carnosus TM300]
Length = 876
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY LKPSQ +D+ L+GD +DNIPG+ G+G+ A++L+ +F
Sbjct: 162 EFIAEKYNGLKPSQIIDMKGLMGDTSDNIPGIAGVGEKTAIKLLNQF 208
>gi|210623711|ref|ZP_03293995.1| hypothetical protein CLOHIR_01946 [Clostridium hiranonis DSM 13275]
gi|210153399|gb|EEA84405.1| hypothetical protein CLOHIR_01946 [Clostridium hiranonis DSM 13275]
Length = 891
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECF 63
+ + KY E+ P+QF+D+ L+GDK+DNIPGV G+G+ ++LI +FG + VE
Sbjct: 168 YNYDSVIEKY-EMTPTQFIDLKGLMGDKSDNIPGVPGVGEKTGIKLIKQFGSIENLVEHT 226
Query: 64 SEM 66
E+
Sbjct: 227 DEL 229
>gi|223934879|ref|ZP_03626798.1| DNA polymerase I [bacterium Ellin514]
gi|223896332|gb|EEF62774.1| DNA polymerase I [bacterium Ellin514]
Length = 947
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G+ + +K+G +P Q +DV+ L GD +DNIPGV GIG+ A +LI ++G
Sbjct: 162 LGLPEILQKWGVQRPEQVIDVLGLWGDVSDNIPGVPGIGEKTAAKLIAQYG 212
>gi|34556857|ref|NP_906672.1| DNA polymerase I [Wolinella succinogenes DSM 1740]
gi|34482572|emb|CAE09572.1| DNA POLYMERASE I [Wolinella succinogenes]
Length = 898
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P+QFVD SLVGD ADN+PGV+G+G A +LI FG L
Sbjct: 163 KYG-VSPAQFVDYQSLVGDSADNVPGVKGVGAKSAQKLIESFGSL 206
>gi|392410913|ref|YP_006447520.1| DNA polymerase I [Desulfomonile tiedjei DSM 6799]
gi|390624049|gb|AFM25256.1| DNA polymerase I [Desulfomonile tiedjei DSM 6799]
Length = 888
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++ E ++K+G P Q +D ++LVGD +DNIPGV GIG RA+ L+ +FG L
Sbjct: 158 TYDREGVSKKFGVF-PEQMLDFLALVGDSSDNIPGVPGIGPKRAIALLQEFGSL 210
>gi|416913|sp|Q04957.1|DPO1_BACCA RecName: Full=DNA polymerase I; Short=POL I
gi|912445|dbj|BAA02361.1| DNA polymerase [Bacillus caldotenax]
Length = 877
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q VD+ L+GDK+DNIPGV GIG+ AV+L+ +FG +
Sbjct: 163 EAVREKYG-LTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLRQFGTV 211
>gi|445116818|ref|ZP_21378649.1| DNA polymerase I [Prevotella nigrescens F0103]
gi|444839987|gb|ELX67031.1| DNA polymerase I [Prevotella nigrescens F0103]
Length = 942
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
GM + +YG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 181 GMNEVEDRYGIPTPAQVIDLLALMGDSADNFPGCPGVGEKTAAKLINQFGSI 232
>gi|229495891|ref|ZP_04389617.1| DNA polymerase type I [Porphyromonas endodontalis ATCC 35406]
gi|229317204|gb|EEN83111.1| DNA polymerase type I [Porphyromonas endodontalis ATCC 35406]
Length = 937
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G + K+G + SQ VD ++LVGD +DNIPG +GIG +A +L+T+FG +
Sbjct: 165 WGEAEVCEKFGLVHCSQMVDYLALVGDASDNIPGCKGIGPKKASELLTQFGSI 217
>gi|383810780|ref|ZP_09966268.1| DNA-directed DNA polymerase [Prevotella sp. oral taxon 306 str.
F0472]
gi|383356628|gb|EID34124.1| DNA-directed DNA polymerase [Prevotella sp. oral taxon 306 str.
F0472]
Length = 920
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ KYG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 158 TLGEKEVESKYGIPTPAQVIDILALMGDTADNFPGCPGVGEKTAAKLINQFGSI 211
>gi|384047445|ref|YP_005495462.1| 5'-3' exonuclease [Bacillus megaterium WSH-002]
gi|345445136|gb|AEN90153.1| 5'-3' exonuclease [Bacillus megaterium WSH-002]
Length = 295
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G + F +Y + P Q+VDV +L+GDK+DNIPGV G+G+ A+ LI ++G +
Sbjct: 168 YGFKHFQEEY-NIHPRQWVDVKALLGDKSDNIPGVPGVGEKAALPLIQQYGSI 219
>gi|295704093|ref|YP_003597168.1| DNA polymerase I [Bacillus megaterium DSM 319]
gi|294801752|gb|ADF38818.1| DNA polymerase I [Bacillus megaterium DSM 319]
Length = 295
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G + F +Y + P Q+VDV +L+GDK+DNIPGV G+G+ A+ LI ++G +
Sbjct: 168 YGFKHFQEEY-NIHPRQWVDVKALLGDKSDNIPGVPGVGEKAALPLIQQYGSI 219
>gi|294498772|ref|YP_003562472.1| DNA polymerase I [Bacillus megaterium QM B1551]
gi|294348709|gb|ADE69038.1| DNA polymerase I [Bacillus megaterium QM B1551]
Length = 295
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G + F +Y + P Q+VDV +L+GDK+DNIPGV G+G+ A+ LI ++G +
Sbjct: 168 YGFKHFQEEY-NIHPRQWVDVKALLGDKSDNIPGVPGVGEKAALPLIQQYGSI 219
>gi|387132501|ref|YP_006298473.1| DNA-directed DNA polymerase [Prevotella intermedia 17]
gi|386375349|gb|AFJ08547.1| DNA-directed DNA polymerase [Prevotella intermedia 17]
Length = 920
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
GM + +YG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 160 GMNEVEDRYGIPTPAQVIDLLALMGDSADNFPGCPGVGEKTAAKLINQFGSI 211
>gi|340350278|ref|ZP_08673274.1| DNA-directed DNA polymerase I [Prevotella nigrescens ATCC 33563]
gi|339608807|gb|EGQ13691.1| DNA-directed DNA polymerase I [Prevotella nigrescens ATCC 33563]
Length = 942
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
GM + +YG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 181 GMNEVEDRYGIPTPAQVIDLLALMGDSADNFPGCPGVGEKTAAKLINQFGSI 232
>gi|156741494|ref|YP_001431623.1| DNA polymerase I [Roseiflexus castenholzii DSM 13941]
gi|156232822|gb|ABU57605.1| DNA polymerase I [Roseiflexus castenholzii DSM 13941]
Length = 972
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+ + +Y L+P Q D+ L GD +DNIPGV+GIG+ A+ L+ +FG +
Sbjct: 167 YGVAEVTERYKGLRPHQLADLRGLKGDPSDNIPGVKGIGEAGAIALLNQFGTI 219
>gi|187933407|ref|YP_001886833.1| DNA polymerase I [Clostridium botulinum B str. Eklund 17B]
gi|187721560|gb|ACD22781.1| DNA polymerase I [Clostridium botulinum B str. Eklund 17B]
Length = 871
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+ P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G L
Sbjct: 169 EITPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYGTL 210
>gi|428302154|ref|YP_007140460.1| DNA polymerase I [Calothrix sp. PCC 6303]
gi|428238698|gb|AFZ04488.1| DNA polymerase I [Calothrix sp. PCC 6303]
Length = 988
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F +D G L PSQ VD +L GD +DNIPGV+GIGD AVQL+ +G L
Sbjct: 191 FSPDDVKESMGIL-PSQVVDYKALCGDTSDNIPGVKGIGDKTAVQLLNTYGSL 242
>gi|295102397|emb|CBK99942.1| DNA polymerase I [Faecalibacterium prausnitzii L2-6]
Length = 861
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P Q +DV SL+GD +DNIPGV+GIG+ A LI K+G L
Sbjct: 168 KYG-VTPRQLIDVKSLMGDTSDNIPGVKGIGEKSAFALIQKYGSL 211
>gi|375087314|ref|ZP_09733694.1| DNA polymerase I [Megamonas funiformis YIT 11815]
gi|374561404|gb|EHR32744.1| DNA polymerase I [Megamonas funiformis YIT 11815]
Length = 882
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
M F E F KY L+P + +D+ +L+GD +DNIPGV GIG+ A++L++++
Sbjct: 163 MQIFDEEAFKEKYAGLEPIKLIDIKALMGDSSDNIPGVPGIGEKTALKLLSQY 215
>gi|339499087|ref|YP_004697122.1| DNA polymerase I [Spirochaeta caldaria DSM 7334]
gi|338833436|gb|AEJ18614.1| DNA polymerase I [Spirochaeta caldaria DSM 7334]
Length = 984
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E ++G + P++ +D+++L+GD +DNIPGV+GIG+ AV+L+T++G L
Sbjct: 186 GPEQVKAEWG-VPPAKVLDILALIGDSSDNIPGVKGIGEKTAVKLMTRYGSL 236
>gi|312109948|ref|YP_003988264.1| DNA polymerase I [Geobacillus sp. Y4.1MC1]
gi|311215049|gb|ADP73653.1| DNA polymerase I [Geobacillus sp. Y4.1MC1]
Length = 878
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
S+ E KYG L P Q +D+ L+GDK+DNIPGV GIG+ A++L+ +FG +
Sbjct: 160 SYTPETVREKYG-LAPQQIIDLKGLMGDKSDNIPGVPGIGEKTALKLLKEFGSI 212
>gi|423718989|ref|ZP_17693171.1| DNA polymerase I [Geobacillus thermoglucosidans TNO-09.020]
gi|383367892|gb|EID45167.1| DNA polymerase I [Geobacillus thermoglucosidans TNO-09.020]
Length = 877
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
S+ E KYG L P Q +D+ L+GDK+DNIPGV GIG+ A++L+ +FG +
Sbjct: 159 SYTPETVREKYG-LAPQQIIDLKGLMGDKSDNIPGVPGIGEKTALKLLKEFGSI 211
>gi|325859715|ref|ZP_08172845.1| DNA-directed DNA polymerase [Prevotella denticola CRIS 18C-A]
gi|325482641|gb|EGC85644.1| DNA-directed DNA polymerase [Prevotella denticola CRIS 18C-A]
Length = 920
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ KYG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 158 TLGEKEVESKYGIPTPAQVIDLLALMGDSADNFPGCPGVGEKTAAKLINQFGSI 211
>gi|336234370|ref|YP_004586986.1| DNA polymerase I [Geobacillus thermoglucosidasius C56-YS93]
gi|335361225|gb|AEH46905.1| DNA polymerase I [Geobacillus thermoglucosidasius C56-YS93]
Length = 878
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
S+ E KYG L P Q +D+ L+GDK+DNIPGV GIG+ A++L+ +FG +
Sbjct: 160 SYTPETVREKYG-LAPQQIIDLKGLMGDKSDNIPGVPGIGEKTALKLLKEFGSI 212
>gi|227484612|ref|ZP_03914928.1| possible DNA-directed DNA polymerase I [Anaerococcus lactolyticus
ATCC 51172]
gi|227237332|gb|EEI87347.1| possible DNA-directed DNA polymerase I [Anaerococcus lactolyticus
ATCC 51172]
Length = 877
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ ++ +YG + P Q +DV L+GDK+DNIPGV+GIG+ RA++ I K+G +
Sbjct: 160 YTVDKIKEEYG-ITPKQLIDVKGLMGDKSDNIPGVDGIGEKRALEFIRKYGSI 211
>gi|327312866|ref|YP_004328303.1| DNA-directed DNA polymerase [Prevotella denticola F0289]
gi|326945701|gb|AEA21586.1| DNA-directed DNA polymerase [Prevotella denticola F0289]
Length = 920
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ KYG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 158 TLGEKEVESKYGIPTPAQVIDLLALMGDSADNFPGCPGVGEKTAAKLINQFGSI 211
>gi|325268321|ref|ZP_08134954.1| DNA-directed DNA polymerase I [Prevotella multiformis DSM 16608]
gi|324989463|gb|EGC21413.1| DNA-directed DNA polymerase I [Prevotella multiformis DSM 16608]
Length = 920
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ KYG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 158 TLGEKEVEAKYGISTPAQVIDLLALMGDSADNFPGCPGVGEKTAAKLINQFGSI 211
>gi|313892366|ref|ZP_07825958.1| DNA-directed DNA polymerase [Dialister microaerophilus UPII 345-E]
gi|313119225|gb|EFR42425.1| DNA-directed DNA polymerase [Dialister microaerophilus UPII 345-E]
Length = 857
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
MA +KYG +KPSQ +D+ +L+GD +DNIPGV+GIG+ AV+L+ K+
Sbjct: 155 MAEMTPSAVVQKYG-IKPSQIIDMKALMGDTSDNIPGVKGIGEKTAVKLLQKY 206
>gi|251779451|ref|ZP_04822371.1| DNA polymerase I [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083766|gb|EES49656.1| DNA polymerase I [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 871
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+ P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G L
Sbjct: 169 EITPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSL 210
>gi|188589036|ref|YP_001921778.1| DNA polymerase I [Clostridium botulinum E3 str. Alaska E43]
gi|188499317|gb|ACD52453.1| DNA polymerase I [Clostridium botulinum E3 str. Alaska E43]
Length = 871
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+ P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G L
Sbjct: 169 EITPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSL 210
>gi|329121315|ref|ZP_08249941.1| DNA-directed DNA polymerase I [Dialister micraerophilus DSM 19965]
gi|327469724|gb|EGF15190.1| DNA-directed DNA polymerase I [Dialister micraerophilus DSM 19965]
Length = 857
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
MA +KYG +KPSQ +D+ +L+GD +DNIPGV+GIG+ AV+L+ K+
Sbjct: 155 MAEMTPSAVVQKYG-IKPSQIIDMKALMGDTSDNIPGVKGIGEKTAVKLLQKY 206
>gi|2506365|sp|P80194.2|DPO1_THECA RecName: Full=DNA polymerase I, thermostable; AltName: Full=TAC
polymerase 1
gi|1470115|gb|AAB81398.1| thermostable DNA polymerase [Thermus caldophilus]
Length = 834
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 11 RKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+KYG LKP Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 171 QKYG-LKPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 215
>gi|410459279|ref|ZP_11313031.1| DNA polymerase I [Bacillus azotoformans LMG 9581]
gi|409930472|gb|EKN67471.1| DNA polymerase I [Bacillus azotoformans LMG 9581]
Length = 878
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVEC 62
++ ++ +Y L P Q +D+ L+GD +DNIPGV G+G+ A++L+T+FG L +E
Sbjct: 160 TYDVDQIKERY-NLTPDQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLTQFGTLEKTLES 218
Query: 63 FSEM 66
+E+
Sbjct: 219 IAEV 222
>gi|357043371|ref|ZP_09105066.1| hypothetical protein HMPREF9138_01538 [Prevotella histicola F0411]
gi|355368545|gb|EHG15962.1| hypothetical protein HMPREF9138_01538 [Prevotella histicola F0411]
Length = 920
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ KYG P+Q VD+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 158 TLGEKEVEAKYGIPTPAQVVDLLALMGDSADNFPGCPGVGEKTAAKLINQFGSI 211
>gi|340351566|ref|ZP_08674478.1| DNA-directed DNA polymerase I [Prevotella pallens ATCC 700821]
gi|339617850|gb|EGQ22463.1| DNA-directed DNA polymerase I [Prevotella pallens ATCC 700821]
Length = 950
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ KYG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 190 GTQEVEAKYGIPTPAQVIDLLALMGDTADNFPGCPGVGEKTAAKLINQFGSI 241
>gi|365121705|ref|ZP_09338620.1| DNA polymerase I [Tannerella sp. 6_1_58FAA_CT1]
gi|363644992|gb|EHL84272.1| DNA polymerase I [Tannerella sp. 6_1_58FAA_CT1]
Length = 926
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 37/52 (71%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ +K+ +P Q +D++ L+GD +DNIPG G+G+ A++L+ +FG +
Sbjct: 164 GVEEIKQKFSIERPEQVIDILGLMGDASDNIPGCPGVGEKTAIKLVNEFGSI 215
>gi|317487766|ref|ZP_07946360.1| DNA polymerase I [Eggerthella sp. 1_3_56FAA]
gi|316913137|gb|EFV34652.1| DNA polymerase I [Eggerthella sp. 1_3_56FAA]
Length = 875
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+A +G + +YG ++P QF+D + L GD +DNIPGV GIGD A +L+ +G L
Sbjct: 158 VAIYGPAEVLERYG-VRPDQFIDFLGLKGDSSDNIPGVPGIGDKTAAKLLQTYGSL 212
>gi|288801790|ref|ZP_06407232.1| DNA polymerase type I [Prevotella melaninogenica D18]
gi|288335832|gb|EFC74265.1| DNA polymerase type I [Prevotella melaninogenica D18]
Length = 920
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ KYG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 159 LGEKEVGEKYGISTPAQVIDLLALMGDSADNFPGCPGVGEKTAAKLINQFGSI 211
>gi|158320241|ref|YP_001512748.1| DNA polymerase I [Alkaliphilus oremlandii OhILAs]
gi|158140440|gb|ABW18752.1| DNA polymerase I [Alkaliphilus oremlandii OhILAs]
Length = 894
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSE 65
MED+ E+ P+QF+D+ L+GDK+DNIPGV G+G+ A++L+ +F + ++ SE
Sbjct: 166 MEDY-----EVTPTQFIDLKGLMGDKSDNIPGVPGVGEKTAIKLLKQFETIENMIQNTSE 220
Query: 66 M 66
+
Sbjct: 221 I 221
>gi|392407763|ref|YP_006444371.1| DNA polymerase I family protein [Anaerobaculum mobile DSM 13181]
gi|390620899|gb|AFM22046.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Anaerobaculum mobile DSM 13181]
Length = 854
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++ + F ++G PS F D ++L+GDK DNIPGV GIG RA LI K+G L
Sbjct: 159 TYDEKTFEDEFG-FPPSSFPDYLALIGDKVDNIPGVPGIGPKRASALIQKYGTL 211
>gi|86607628|ref|YP_476390.1| DNA polymerase I [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556170|gb|ABD01127.1| DNA polymerase I [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 931
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++ FG E K G + P Q VD +L GD +DNIPGV+GIG RAV+L+ ++G L
Sbjct: 165 ISEFGPEQVKEKLG-IWPWQVVDYKALCGDPSDNIPGVKGIGPKRAVELLERYGSL 219
>gi|325831762|ref|ZP_08164951.1| DNA-directed DNA polymerase [Eggerthella sp. HGA1]
gi|325486431|gb|EGC88881.1| DNA-directed DNA polymerase [Eggerthella sp. HGA1]
Length = 875
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+A +G + +YG ++P QF+D + L GD +DNIPGV GIGD A +L+ +G L
Sbjct: 158 VAIYGPAEVLERYG-VRPDQFIDFLGLKGDSSDNIPGVPGIGDKTAAKLLQTYGSL 212
>gi|409195816|ref|ZP_11224479.1| DNA polymerase I [Marinilabilia salmonicolor JCM 21150]
Length = 924
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+G+ + +K+ KP Q +D+++L GD ADNIPG GIG+ RA +I K+G
Sbjct: 165 WGIPEIQKKFSVEKPEQVIDLLALWGDSADNIPGCPGIGEKRAKDIIGKYG 215
>gi|82751278|ref|YP_417019.1| DNA polymerase I [Staphylococcus aureus RF122]
gi|82656809|emb|CAI81238.1| DNA polymerase I [Staphylococcus aureus RF122]
Length = 876
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +FG +
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQFGTV 211
>gi|414078380|ref|YP_006997698.1| DNA polymerase I [Anabaena sp. 90]
gi|413971796|gb|AFW95885.1| DNA polymerase I [Anabaena sp. 90]
Length = 967
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+A F E+ K G P+Q VD +L GDK+DNIPGV+GIG+ AVQL+ + L
Sbjct: 177 IAEFKAEEVKEKLGVF-PTQVVDFKALCGDKSDNIPGVKGIGEKTAVQLLNTYNSL 231
>gi|300727538|ref|ZP_07060929.1| DNA polymerase type I [Prevotella bryantii B14]
gi|299775241|gb|EFI71842.1| DNA polymerase type I [Prevotella bryantii B14]
Length = 920
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ A+KYG +Q +D+++L+GD ADN PG G+G+ A +LI +FG
Sbjct: 159 LGEKEIAQKYGISSSTQIIDLLALMGDSADNFPGCPGVGEKTAAKLINQFG 209
>gi|358055643|ref|ZP_09147547.1| DNA polymerase I [Staphylococcus simiae CCM 7213]
gi|357256686|gb|EHJ07022.1| DNA polymerase I [Staphylococcus simiae CCM 7213]
Length = 877
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY LKP Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYNGLKPKQIIDMKGLMGDSSDNIPGVAGVGEKTAIKLLNQF 208
>gi|189485016|ref|YP_001955957.1| DNA polymerase I [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170286975|dbj|BAG13496.1| DNA polymerase I [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 908
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P Q D+ +L+GD +DNIPG++GIG+ AV+LI KFG L
Sbjct: 164 KYG-VAPKQLSDIFALMGDASDNIPGIKGIGEKTAVKLIEKFGNL 207
>gi|302344810|ref|YP_003813163.1| DNA-directed DNA polymerase [Prevotella melaninogenica ATCC 25845]
gi|302150181|gb|ADK96443.1| DNA-directed DNA polymerase [Prevotella melaninogenica ATCC 25845]
Length = 920
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ KYG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 159 LGEKEVGEKYGIPTPAQVIDLLALMGDSADNFPGCPGVGEKTAAKLINQFGSI 211
>gi|332981757|ref|YP_004463198.1| DNA polymerase I [Mahella australiensis 50-1 BON]
gi|332699435|gb|AEE96376.1| DNA polymerase I [Mahella australiensis 50-1 BON]
Length = 850
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 11 RKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++YG +KP Q +DV L+GD +DNIPGV GIG+ A++LI +FG L
Sbjct: 167 QRYG-IKPEQLIDVKGLMGDASDNIPGVPGIGEKTALRLIKQFGSL 211
>gi|269956308|ref|YP_003326097.1| DNA polymerase I [Xylanimonas cellulosilytica DSM 15894]
gi|269304989|gb|ACZ30539.1| DNA polymerase I [Xylanimonas cellulosilytica DSM 15894]
Length = 905
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
MA F E A KYG + P Q+ D+ +LVG+ +DN+PGV G+G A + +T+FG L
Sbjct: 172 MARFTPETVAEKYG-VPPEQYPDLAALVGESSDNLPGVPGVGPKTAAKWVTQFGGL 226
>gi|239827422|ref|YP_002950046.1| 5'-3' exonuclease [Geobacillus sp. WCH70]
gi|239807715|gb|ACS24780.1| 5'-3' exonuclease [Geobacillus sp. WCH70]
Length = 292
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ +E F RK E+ PSQ+VDV +L+GD +DN PGV GIG+ A++L+ ++G +
Sbjct: 166 YTLERF-RKEMEILPSQWVDVKALMGDASDNYPGVRGIGEKTALKLVRQYGSI 217
>gi|222055465|ref|YP_002537827.1| Ribonuclease H [Geobacter daltonii FRC-32]
gi|221564754|gb|ACM20726.1| Ribonuclease H [Geobacter daltonii FRC-32]
Length = 480
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E+ ++G + P Q DV+ L GD ADNIPGV GIG+ A +L+ +FG L
Sbjct: 160 GTEEVLDRFG-VTPEQVADVLGLAGDTADNIPGVPGIGEKTAAKLVRQFGSL 210
>gi|253827195|ref|ZP_04870080.1| DNA polymerase type I [Helicobacter canadensis MIT 98-5491]
gi|313141399|ref|ZP_07803592.1| DNA polymerase I [Helicobacter canadensis MIT 98-5491]
gi|253510601|gb|EES89260.1| DNA polymerase type I [Helicobacter canadensis MIT 98-5491]
gi|313130430|gb|EFR48047.1| DNA polymerase I [Helicobacter canadensis MIT 98-5491]
Length = 896
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 18 PSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
PSQFVD S+VGD ADN+PGV+GIG AV L+ FG L
Sbjct: 170 PSQFVDYQSIVGDSADNVPGVKGIGAKGAVNLLNNFGSL 208
>gi|342731948|ref|YP_004770787.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384455366|ref|YP_005667960.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417960585|ref|ZP_12603158.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-1]
gi|417962105|ref|ZP_12604382.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-2]
gi|417964465|ref|ZP_12606191.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-4]
gi|417969282|ref|ZP_12610229.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-co]
gi|418016660|ref|ZP_12656224.1| DNA-directed DNA polymerase I [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372195|ref|ZP_12964290.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329403|dbj|BAK56045.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345505633|gb|EGX27928.1| DNA-directed DNA polymerase I [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346983708|dbj|BAK79384.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380330670|gb|EIA21867.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-1]
gi|380331124|gb|EIA22223.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-2]
gi|380338116|gb|EIA27052.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-co]
gi|380341359|gb|EIA29839.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-4]
gi|380342801|gb|EIA31234.1| DNA polymerase I [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 857
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGM---LVFNV 60
+ E YG + P++F+DV +++GDK+DNIPGV GIG+ A+ LI +F L N+
Sbjct: 159 YNEEKMIEVYG-VTPTEFIDVKAIMGDKSDNIPGVSGIGEKGAISLIKEFKSIENLYENL 217
Query: 61 ECFSE 65
EC E
Sbjct: 218 ECLKE 222
>gi|126661491|ref|ZP_01732543.1| DNA polymerase I [Cyanothece sp. CCY0110]
gi|126617218|gb|EAZ88035.1| DNA polymerase I [Cyanothece sp. CCY0110]
Length = 259
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F ++ K G +KP+Q +D +L GDK+DNIPGV GIG+ AV+L++++G L
Sbjct: 178 FDIDAVKEKMG-IKPTQVIDYKALCGDKSDNIPGVRGIGEKTAVKLLSEYGSL 229
>gi|434391137|ref|YP_007126084.1| DNA polymerase I [Gloeocapsa sp. PCC 7428]
gi|428262978|gb|AFZ28924.1| DNA polymerase I [Gloeocapsa sp. PCC 7428]
Length = 980
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F E K G L PSQ VD +L GDK+DNIPGV+GIG+ A+QL+ ++ L
Sbjct: 185 FRTEQVKEKMGVL-PSQIVDFKALCGDKSDNIPGVKGIGEKTAIQLLNQYTSL 236
>gi|256544867|ref|ZP_05472238.1| DNA polymerase I [Anaerococcus vaginalis ATCC 51170]
gi|256399366|gb|EEU12972.1| DNA polymerase I [Anaerococcus vaginalis ATCC 51170]
Length = 893
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 13 YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
YG L P Q +DV L+GDK+DNIPGV+GIG+ A++ I K+G +
Sbjct: 183 YG-LSPKQLIDVKGLMGDKSDNIPGVDGIGEKTAIKFIKKYGSM 225
>gi|257791761|ref|YP_003182367.1| DNA polymerase I [Eggerthella lenta DSM 2243]
gi|257475658|gb|ACV55978.1| DNA polymerase I [Eggerthella lenta DSM 2243]
Length = 875
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+A +G + +YG ++P QF+D + L GD +DNIPGV GIGD A +L+ +G L
Sbjct: 158 VAIYGPAEVLERYG-VRPDQFIDFLGLKGDSSDNIPGVPGIGDKTAAKLLQTYGNL 212
>gi|209965764|ref|YP_002298679.1| DNA polymerase I [Rhodospirillum centenum SW]
gi|209959230|gb|ACI99866.1| DNA polymerase I, putative [Rhodospirillum centenum SW]
Length = 987
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E+ A K+G + P + VDV +L GD DN+PGV GIG A QLIT++G L
Sbjct: 188 GPEEVAEKFG-VPPEKVVDVQALAGDSVDNVPGVPGIGVKTAAQLITEYGDL 238
>gi|314936207|ref|ZP_07843554.1| DNA polymerase I [Staphylococcus hominis subsp. hominis C80]
gi|418618598|ref|ZP_13181463.1| DNA-directed DNA polymerase [Staphylococcus hominis VCU122]
gi|313654826|gb|EFS18571.1| DNA polymerase I [Staphylococcus hominis subsp. hominis C80]
gi|374827358|gb|EHR91221.1| DNA-directed DNA polymerase [Staphylococcus hominis VCU122]
Length = 878
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY LKP Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYNGLKPIQIIDMKGLMGDSSDNIPGVAGVGEKTAIKLLNQF 208
>gi|228475217|ref|ZP_04059943.1| DNA polymerase I [Staphylococcus hominis SK119]
gi|228270828|gb|EEK12230.1| DNA polymerase I [Staphylococcus hominis SK119]
Length = 878
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY LKP Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYNGLKPIQIIDMKGLMGDSSDNIPGVAGVGEKTAIKLLNQF 208
>gi|295103350|emb|CBL00894.1| DNA polymerase I [Faecalibacterium prausnitzii SL3/3]
Length = 857
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L P Q ++V SL+GD +DNIPGV+GIG+ A+ L+ FG L
Sbjct: 168 KYG-LAPKQLIEVKSLMGDTSDNIPGVKGIGEKTALSLVQTFGSL 211
>gi|160944566|ref|ZP_02091794.1| hypothetical protein FAEPRAM212_02080 [Faecalibacterium prausnitzii
M21/2]
gi|158444348|gb|EDP21352.1| DNA-directed DNA polymerase [Faecalibacterium prausnitzii M21/2]
Length = 857
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L P Q ++V SL+GD +DNIPGV+GIG+ A+ L+ FG L
Sbjct: 168 KYG-LAPKQLIEVKSLMGDTSDNIPGVKGIGEKTALSLVQAFGSL 211
>gi|219850431|ref|YP_002464864.1| DNA polymerase I [Chloroflexus aggregans DSM 9485]
gi|219544690|gb|ACL26428.1| DNA polymerase I [Chloroflexus aggregans DSM 9485]
Length = 936
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ +E ++Y L+P+Q D+ L GD +DNIPGV GIG+ A+ L+ +FG L
Sbjct: 164 YDVEQVRKRYDGLEPAQLADLRGLKGDSSDNIPGVRGIGEKGAITLLKQFGSL 216
>gi|257438461|ref|ZP_05614216.1| DNA polymerase I [Faecalibacterium prausnitzii A2-165]
gi|257199040|gb|EEU97324.1| DNA-directed DNA polymerase [Faecalibacterium prausnitzii A2-165]
Length = 859
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG ++P Q ++V SL+GD +DNIPGV+GIG+ A+ L+ FG L
Sbjct: 175 KYG-IEPKQLIEVKSLMGDTSDNIPGVKGIGEKTAMTLVKNFGTL 218
>gi|145347581|ref|XP_001418242.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578471|gb|ABO96535.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 233
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 4 FGMEDFARKYGE-LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
F ++DF + ++P QF+D ++LVGD ADNIPGVEG+G A+ L+ ++G
Sbjct: 163 FTVDDFRAMHNNVIEPEQFIDFLALVGDSADNIPGVEGVGPKTALALLEQYG 214
>gi|313115485|ref|ZP_07800950.1| DNA-directed DNA polymerase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622195|gb|EFQ05685.1| DNA-directed DNA polymerase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 864
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG ++P Q ++V SL+GD +DNIPGV+GIG+ A+ L+ FG L
Sbjct: 175 KYG-IQPRQLIEVKSLMGDASDNIPGVKGIGEKTALTLVQNFGTL 218
>gi|150015687|ref|YP_001307941.1| DNA polymerase I [Clostridium beijerinckii NCIMB 8052]
gi|149902152|gb|ABR32985.1| DNA polymerase I [Clostridium beijerinckii NCIMB 8052]
Length = 867
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 2 ASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
A + E F ++ E+ P QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 157 AVYDKESFMDEF-EVTPEQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|317121267|ref|YP_004101270.1| DNA polymerase I [Thermaerobacter marianensis DSM 12885]
gi|315591247|gb|ADU50543.1| DNA polymerase I [Thermaerobacter marianensis DSM 12885]
Length = 1060
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+QF+DV +L+GD +DNIPGV GIG+ A++LI +FG L
Sbjct: 179 IAPAQFLDVKALMGDPSDNIPGVPGIGEKTALKLIQQFGDL 219
>gi|291532675|emb|CBL05788.1| 5'-3' exonuclease (including N-terminal domain of PolI) [Megamonas
hypermegale ART12/1]
Length = 240
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
M F E F KY L+P + +D+ +L+GD +DNIPGV GIG+ A++L++++
Sbjct: 171 MQIFDEEAFKEKYAGLEPIKLIDIKALMGDSSDNIPGVPGIGEKTALKLLSQY 223
>gi|289578024|ref|YP_003476651.1| DNA polymerase I [Thermoanaerobacter italicus Ab9]
gi|289527737|gb|ADD02089.1| DNA polymerase I [Thermoanaerobacter italicus Ab9]
Length = 872
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
M F + +YG + P QF+D+ L+GDK+DNIPGV IG+ A++L+ FG + +
Sbjct: 156 MEEFDEKAILERYG-ITPQQFIDLKGLMGDKSDNIPGVPNIGEKTAIKLLKDFGTIENLI 214
Query: 61 ECFSEM 66
+ S++
Sbjct: 215 QNLSQL 220
>gi|406950035|gb|EKD80386.1| DNA polymerase I [uncultured bacterium]
Length = 301
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G ++ KYG + PSQ VD +LVGD +DNIPGV GIG A LI FG L
Sbjct: 156 YGPDEVWNKYG-VHPSQIVDYKALVGDTSDNIPGVAGIGPKTAANLIKMFGSL 207
>gi|297544296|ref|YP_003676598.1| DNA polymerase I [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296842071|gb|ADH60587.1| DNA polymerase I [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 872
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
M F + +YG + P QF+D+ L+GDK+DNIPGV IG+ A++L+ FG + +
Sbjct: 156 MEEFDEKAILERYG-ITPQQFIDLKGLMGDKSDNIPGVPNIGEKTAIKLLKDFGTIENLI 214
Query: 61 ECFSEM 66
+ S++
Sbjct: 215 QNLSQL 220
>gi|281422322|ref|ZP_06253321.1| DNA polymerase type I [Prevotella copri DSM 18205]
gi|281403643|gb|EFB34323.1| DNA polymerase type I [Prevotella copri DSM 18205]
Length = 923
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G+++ KY P Q +D+++L+GD ADN PG G+G+ A++LI +FG
Sbjct: 162 LGVQEIEEKYSITSPLQVIDLLALMGDSADNFPGCPGVGEKTAIKLINEFG 212
>gi|404417732|ref|ZP_10999520.1| DNA polymerase I [Staphylococcus arlettae CVD059]
gi|403489934|gb|EJY95491.1| DNA polymerase I [Staphylococcus arlettae CVD059]
Length = 876
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q VD+ L+GD +DNIPGV G+G+ A++L+++F
Sbjct: 162 EFIAEKYNGLSPEQIVDMKGLMGDTSDNIPGVAGVGEKTAIKLLSQF 208
>gi|397691563|ref|YP_006528817.1| DNA polymerase I [Melioribacter roseus P3M]
gi|395813055|gb|AFN75804.1| DNA polymerase I [Melioribacter roseus P3M]
Length = 927
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+YG +KPSQ VD ++LVGD +D+IPGV GIG A LI KFG L
Sbjct: 171 EYG-IKPSQMVDYLALVGDSSDDIPGVAGIGPKTAAPLIRKFGSL 214
>gi|290969141|ref|ZP_06560666.1| DNA-directed DNA polymerase [Megasphaera genomosp. type_1 str. 28L]
gi|290780647|gb|EFD93250.1| DNA-directed DNA polymerase [Megasphaera genomosp. type_1 str. 28L]
Length = 857
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
M + E R+YG P+Q +D+ +L+GD ADNIPGV G+G+ A++LI +FG
Sbjct: 157 MQAVTPEVMVREYG-YTPAQVIDMKALMGDTADNIPGVPGVGEKTALKLIQEFG 209
>gi|289522409|ref|ZP_06439263.1| DNA polymerase I [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289504245|gb|EFD25409.1| DNA polymerase I [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 856
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 9 FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F ++G PS F D +SL+GDK DNIPG+ GIG RA LI ++G L
Sbjct: 165 FEEEFG-FPPSSFPDYLSLIGDKVDNIPGIPGIGSKRASALIQQYGSL 211
>gi|158335307|ref|YP_001516479.1| DNA polymerase I [Acaryochloris marina MBIC11017]
gi|158305548|gb|ABW27165.1| DNA polymerase I [Acaryochloris marina MBIC11017]
Length = 957
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 2 ASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
SFG + K G + Q VD +L GD +DNIPGV+GIGD AV+L+T++G L
Sbjct: 166 GSFGPTEVQEKMG-VTVEQIVDYKALCGDSSDNIPGVKGIGDKTAVKLLTEYGTL 219
>gi|345884856|ref|ZP_08836256.1| hypothetical protein HMPREF0666_02432 [Prevotella sp. C561]
gi|345042355|gb|EGW46456.1| hypothetical protein HMPREF0666_02432 [Prevotella sp. C561]
Length = 920
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ KYG P+Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 160 GEKEVGDKYGIPTPAQVIDLLALMGDTADNFPGCPGVGEKTAAKLINQFGSI 211
>gi|171911947|ref|ZP_02927417.1| DNA polymerase I [Verrucomicrobium spinosum DSM 4136]
Length = 971
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G+++ ++G P Q +D++ L+GD +DNIPG+ G+G+ A +LI +FG
Sbjct: 167 LGVKEVCERWGVSNPGQVIDLLGLMGDASDNIPGIAGVGEKTAAKLIQQFG 217
>gi|254412782|ref|ZP_05026555.1| DNA polymerase I superfamily [Coleofasciculus chthonoplastes PCC
7420]
gi|196180517|gb|EDX75508.1| DNA polymerase I superfamily [Coleofasciculus chthonoplastes PCC
7420]
Length = 984
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Query: 2 ASFGMEDFA-----RKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+S G+E+++ K G + P Q VD +L GDK+DNIPGV GIG+ AV+L+ FG L
Sbjct: 185 SSTGLEEYSTQGVKNKLG-ITPEQVVDYKALCGDKSDNIPGVRGIGEKTAVKLLNDFGSL 243
>gi|359457186|ref|ZP_09245749.1| DNA polymerase I [Acaryochloris sp. CCMEE 5410]
Length = 983
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 2 ASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
SFG + K G + Q VD +L GD +DNIPGV+GIGD AV+L+T++G L
Sbjct: 192 GSFGPTEVQEKMGVMV-EQIVDYKALCGDSSDNIPGVKGIGDKTAVKLLTEYGTL 245
>gi|406908714|gb|EKD49149.1| hypothetical protein ACD_63C00254G0006 [uncultured bacterium]
Length = 927
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 11 RKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++YG LKP Q +D +L GD +DNIPGV GIG A +LI++FG L
Sbjct: 175 KRYG-LKPEQLIDFKALAGDSSDNIPGVHGIGQKIAAELISEFGNL 219
>gi|300868897|ref|ZP_07113503.1| DNA polymerase I [Oscillatoria sp. PCC 6506]
gi|300333114|emb|CBN58695.1| DNA polymerase I [Oscillatoria sp. PCC 6506]
Length = 1009
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G E K G ++P Q VD +L GD +DNIPGV GIG+ AVQL+T + L
Sbjct: 181 YGPEQVIEKLG-IRPDQVVDYKALCGDASDNIPGVRGIGEKTAVQLLTTYNSL 232
>gi|451817711|ref|YP_007453912.1| DNA polymerase I [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451783690|gb|AGF54658.1| DNA polymerase I [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 867
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
E+ P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 169 EVTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|357420764|ref|YP_004928210.1| DNA polymerase I [Blattabacterium sp. (Mastotermes darwiniensis)
str. MADAR]
gi|354803271|gb|AER40385.1| DNA polymerase I [Blattabacterium sp. (Mastotermes darwiniensis)
str. MADAR]
Length = 300
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ +G P + +D+ S++GD +DNIPG+ GIG+ +A + I K+G L
Sbjct: 164 LGIEEIKENFGVSSPKKVIDLWSMMGDSSDNIPGLPGIGEKKAKEFIQKYGSL 216
>gi|288800530|ref|ZP_06405988.1| DNA polymerase type I [Prevotella sp. oral taxon 299 str. F0039]
gi|288332743|gb|EFC71223.1| DNA polymerase type I [Prevotella sp. oral taxon 299 str. F0039]
Length = 921
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
G+E KY PSQ +D+++L+GD ADN PG G+G+ A++LI F
Sbjct: 160 LGVEQIKEKYQIESPSQVIDILALMGDSADNFPGCPGVGEKTAIKLINDF 209
>gi|384172414|ref|YP_005553791.1| DNA polymerase I [Arcobacter sp. L]
gi|345472024|dbj|BAK73474.1| DNA polymerase I [Arcobacter sp. L]
Length = 894
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG PSQF D SL+GD ADNIPGV+GIG A LI +FG L
Sbjct: 165 KYGVF-PSQFTDYQSLLGDSADNIPGVKGIGAKTAEALIKEFGTL 208
>gi|257460112|ref|ZP_05625216.1| DNA polymerase I [Campylobacter gracilis RM3268]
gi|257442553|gb|EEV17692.1| DNA polymerase I [Campylobacter gracilis RM3268]
Length = 938
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G E+ ++YG + P Q VD +++ GD ADNIPGV GIGD A +L+ ++G L
Sbjct: 154 YGREECLQRYG-VYPEQIVDFLAICGDSADNIPGVRGIGDKGAKKLLDEWGSL 205
>gi|427727808|ref|YP_007074045.1| DNA polymerase I [Nostoc sp. PCC 7524]
gi|427363727|gb|AFY46448.1| DNA polymerase I [Nostoc sp. PCC 7524]
Length = 970
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E+ K G L P+Q VD +L GDK+DNIPGV GIG+ AVQL+ + L
Sbjct: 179 ITEFSTEEVKAKLGIL-PTQVVDFKALCGDKSDNIPGVRGIGEKTAVQLLNTYDSL 233
>gi|452990420|emb|CCQ98373.1| DNA polymerase I [Clostridium ultunense Esp]
Length = 894
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ + E +YG + P QF+D+ L+GDK+DNIPGV GIG+ ++L+ +FG +
Sbjct: 161 LEEYDREKIIEEYG-ITPDQFIDLKGLMGDKSDNIPGVPGIGEKTGIKLLKEFGTM 215
>gi|336431040|ref|ZP_08610894.1| hypothetical protein HMPREF0991_00013 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019962|gb|EGN49679.1| hypothetical protein HMPREF0991_00013 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 871
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
D +Y E+ P++F+DV +L+GD ADNIPGV G+G+ A ++I ++G L
Sbjct: 166 DVKERY-EVTPTEFIDVKALMGDTADNIPGVPGVGEKTATKIIVEYGSL 213
>gi|154502707|ref|ZP_02039767.1| hypothetical protein RUMGNA_00520 [Ruminococcus gnavus ATCC 29149]
gi|153796590|gb|EDN79010.1| DNA-directed DNA polymerase [Ruminococcus gnavus ATCC 29149]
Length = 871
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
D +Y E+ P++F+DV +L+GD ADNIPGV G+G+ A ++I ++G L
Sbjct: 166 DVKERY-EVTPTEFIDVKALMGDTADNIPGVPGVGEKTATKIIVEYGSL 213
>gi|404371696|ref|ZP_10977000.1| DNA polymerase I [Clostridium sp. 7_2_43FAA]
gi|226912178|gb|EEH97379.1| DNA polymerase I [Clostridium sp. 7_2_43FAA]
Length = 870
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 2 ASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
A + + F ++G + P+QF+DV L+GDK+DNIPGV G+G+ A +LI +G
Sbjct: 157 AVYDHKTFVEEFG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAYKLIQTYG 208
>gi|434405668|ref|YP_007148553.1| DNA polymerase I [Cylindrospermum stagnale PCC 7417]
gi|428259923|gb|AFZ25873.1| DNA polymerase I [Cylindrospermum stagnale PCC 7417]
Length = 979
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E K G PSQ VD +L GDK+DNIPGV GIG+ AVQL+ + L
Sbjct: 185 ITEFSAEQVKEKLGVF-PSQVVDFKALCGDKSDNIPGVRGIGEKTAVQLLNAYNSL 239
>gi|365157607|ref|ZP_09353860.1| hypothetical protein HMPREF1015_00020 [Bacillus smithii 7_3_47FAA]
gi|363623427|gb|EHL74548.1| hypothetical protein HMPREF1015_00020 [Bacillus smithii 7_3_47FAA]
Length = 303
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 2 ASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A + E F +YG + P QF+DV +L+GD +D PGV+GIG+ A++LI +FG +
Sbjct: 162 AFYTYERFYEEYG-VTPQQFIDVKALMGDPSDGYPGVKGIGEKTALKLIQQFGSI 215
>gi|229916392|ref|YP_002885038.1| DNA polymerase I [Exiguobacterium sp. AT1b]
gi|229467821|gb|ACQ69593.1| DNA polymerase I [Exiguobacterium sp. AT1b]
Length = 864
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 9 FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F +Y L+P Q +D+ L+GDK+DNIPG+ G+G+ A++LI +G +
Sbjct: 162 FKERYDGLQPIQMIDLKGLMGDKSDNIPGIPGVGEKTALKLIATYGTV 209
>gi|56963870|ref|YP_175601.1| 5'-3' exonuclease [Bacillus clausii KSM-K16]
gi|56910113|dbj|BAD64640.1| 5'-3' exonuclease [Bacillus clausii KSM-K16]
Length = 302
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F F YG L P+Q+VDV +LVGD +DNIPG GIG+ A+ LI +G +
Sbjct: 169 FDEASFKASYG-LSPTQWVDVKALVGDTSDNIPGCPGIGEKTALPLIAAYGSI 220
>gi|347755827|ref|YP_004863391.1| DNA polymerase I [Candidatus Chloracidobacterium thermophilum B]
gi|347588345|gb|AEP12875.1| DNA polymerase I [Candidatus Chloracidobacterium thermophilum B]
Length = 890
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 18 PSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
P Q VDV++L GD +DNIPG GIG+ AVQLI +FG L
Sbjct: 179 PEQVVDVLALWGDSSDNIPGAPGIGEKGAVQLIRQFGSL 217
>gi|331269049|ref|YP_004395541.1| DNA polymerase I [Clostridium botulinum BKT015925]
gi|329125599|gb|AEB75544.1| DNA polymerase I [Clostridium botulinum BKT015925]
Length = 881
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+ P+QF+DV L+GDK+DNIPGV GIG A +LI ++G +
Sbjct: 171 EVTPTQFIDVKGLMGDKSDNIPGVPGIGTKTAFKLIKEYGSI 212
>gi|46198998|ref|YP_004665.1| DNA polymerase I [Thermus thermophilus HB27]
gi|46196622|gb|AAS81038.1| DNA polymerase I [Thermus thermophilus HB27]
Length = 834
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 172 KYG-LRPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 215
>gi|55981023|ref|YP_144320.1| DNA polymerase I [Thermus thermophilus HB8]
gi|62298349|sp|P52028.2|DPO1T_THET8 RecName: Full=DNA polymerase I, thermostable; AltName: Full=Tth
polymerase 1
gi|55772436|dbj|BAD70877.1| DNA polymerase I [Thermus thermophilus HB8]
Length = 834
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 172 KYG-LRPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 215
>gi|1097211|prf||2113329A DNA polymerase
Length = 834
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 172 KYG-LRPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 215
>gi|466574|dbj|BAA06033.1| thermostable DNA polymerase I [Thermus thermophilus HB8]
gi|6009635|dbj|BAA84999.1| Tth DNA polymerase [Expression vector pLED-HB]
Length = 834
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 172 KYG-LRPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 215
>gi|410110888|dbj|BAM64800.1| DNA polymerase I [Thermus thermophilus]
Length = 834
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 172 KYG-LRPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 215
>gi|386360445|ref|YP_006058690.1| DNA polymerase I [Thermus thermophilus JL-18]
gi|383509472|gb|AFH38904.1| DNA polymerase I [Thermus thermophilus JL-18]
Length = 831
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 169 KYG-LRPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 212
>gi|381190626|ref|ZP_09898144.1| DNA polymerase I [Thermus sp. RL]
gi|380451509|gb|EIA39115.1| DNA polymerase I [Thermus sp. RL]
Length = 831
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 169 KYG-LRPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 212
>gi|345881284|ref|ZP_08832806.1| hypothetical protein HMPREF9431_01470 [Prevotella oulorum F0390]
gi|343919949|gb|EGV30689.1| hypothetical protein HMPREF9431_01470 [Prevotella oulorum F0390]
Length = 920
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G + KYG +P Q +D+++L+GD DN PG G+G+ AV+LI FG
Sbjct: 160 GPQQIQAKYGVERPEQVIDLLALMGDAVDNFPGCPGVGEKTAVKLINAFG 209
>gi|384431242|ref|YP_005640602.1| DNA polymerase I [Thermus thermophilus SG0.5JP17-16]
gi|333966710|gb|AEG33475.1| DNA polymerase I [Thermus thermophilus SG0.5JP17-16]
Length = 831
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 169 KYG-LRPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 212
>gi|199581287|gb|ACH89345.1| DNA polymerase I [Thermus thermophilus]
Length = 834
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 172 KYG-LRPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 215
>gi|210077511|gb|ACJ07020.1| PolI [Thermus sp. Fiji3.A1]
Length = 831
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +LVGD +DN+PGV+GIG+ A++L+ ++G L
Sbjct: 169 KYG-LRPEQWVDFRALVGDPSDNLPGVKGIGEKTALKLLKEWGSL 212
>gi|433445071|ref|ZP_20409692.1| 5'-3' exonuclease [Anoxybacillus flavithermus TNO-09.006]
gi|432001233|gb|ELK22114.1| 5'-3' exonuclease [Anoxybacillus flavithermus TNO-09.006]
Length = 277
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVEC 62
++ ++ F ++ G ++P Q +DV +L+GD +DN PGV GIG+ +A +LI ++G + +E
Sbjct: 161 AYTLDRFTQEKG-IQPHQLIDVKALMGDASDNYPGVRGIGEKQAFKLIQQYGSIEGIIEN 219
Query: 63 FSEM 66
F+ +
Sbjct: 220 FANL 223
>gi|17228749|ref|NP_485297.1| DNA polymerase I [Nostoc sp. PCC 7120]
gi|17130601|dbj|BAB73211.1| DNA polymerase I [Nostoc sp. PCC 7120]
Length = 977
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 18 PSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
P+Q VD +L GDK+DNIPGV GIG+ AVQL++ +G L
Sbjct: 197 PTQVVDFKALCGDKSDNIPGVRGIGEKTAVQLLSTYGSL 235
>gi|94676906|ref|YP_588585.1| DNA polymerase I [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|94220056|gb|ABF14215.1| DNA polymerase I [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 306
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVF 58
G ++ +K+G L P +D I+LVGDK+DNIPGV GIG A L+ +FG L F
Sbjct: 153 LGPKEVQKKFGVL-PELIIDYIALVGDKSDNIPGVPGIGKKTAKILLQQFGGLKF 206
>gi|429766177|ref|ZP_19298451.1| DNA-directed DNA polymerase [Clostridium celatum DSM 1785]
gi|429185157|gb|EKY26146.1| DNA-directed DNA polymerase [Clostridium celatum DSM 1785]
Length = 869
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 2 ASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A + E F ++G + P+Q++DV L+GDK+DNIPGV G+G+ A +LI +G +
Sbjct: 157 AVYNKEAFEAEFG-VTPTQYIDVKGLMGDKSDNIPGVPGVGEKTAFKLIQTYGSM 210
>gi|75906804|ref|YP_321100.1| DNA polymerase I [Anabaena variabilis ATCC 29413]
gi|75700529|gb|ABA20205.1| DNA polymerase A [Anabaena variabilis ATCC 29413]
Length = 977
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 18 PSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
P+Q VD +L GDK+DNIPGV GIG+ AVQL++ +G L
Sbjct: 197 PTQVVDFKALCGDKSDNIPGVRGIGEKTAVQLLSTYGSL 235
>gi|425056059|ref|ZP_18459519.1| DNA-directed DNA polymerase [Enterococcus faecium 505]
gi|403032458|gb|EJY44012.1| DNA-directed DNA polymerase [Enterococcus faecium 505]
Length = 881
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDIKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|255524969|ref|ZP_05391916.1| DNA polymerase I [Clostridium carboxidivorans P7]
gi|255511341|gb|EET87634.1| DNA polymerase I [Clostridium carboxidivorans P7]
Length = 880
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+ P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G +
Sbjct: 171 EVTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSI 212
>gi|82617846|gb|ABB84840.1| PolI DNA polymerase [uncultured delta proteobacterium DeepAnt-32C6]
Length = 857
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ RK ++P Q +D ++LVGDK DN+PGV GIG AV L+ ++G L
Sbjct: 130 ELVRKKWGVRPEQIIDYLALVGDKVDNVPGVPGIGAKGAVALLERYGDL 178
>gi|168187834|ref|ZP_02622469.1| DNA polymerase type I [Clostridium botulinum C str. Eklund]
gi|169294285|gb|EDS76418.1| DNA polymerase type I [Clostridium botulinum C str. Eklund]
Length = 878
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+YG + P+QF+DV L+GDK+DNIPGV GIG+ A++LI ++G +
Sbjct: 169 EYG-VTPTQFIDVKGLMGDKSDNIPGVPGIGNKTALKLIKEYGSI 212
>gi|86605248|ref|YP_474011.1| DNA polymerase I [Synechococcus sp. JA-3-3Ab]
gi|86553790|gb|ABC98748.1| DNA polymerase I [Synechococcus sp. JA-3-3Ab]
Length = 928
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML--VF 58
++ FG ++ K G + P Q VD +L GD +DNIPGV+GIG RA +L+ ++G L +F
Sbjct: 165 VSEFGPQEVKEKLG-IWPWQVVDYKALCGDPSDNIPGVKGIGPKRAAELLQRYGSLEEIF 223
Query: 59 N 59
N
Sbjct: 224 N 224
>gi|423301030|ref|ZP_17279054.1| DNA polymerase I [Bacteroides finegoldii CL09T03C10]
gi|408472365|gb|EKJ90893.1| DNA polymerase I [Bacteroides finegoldii CL09T03C10]
Length = 930
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
GME+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI KFG +
Sbjct: 164 GMEEVKAKFDIKFPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAKFGSI 215
>gi|352517679|ref|YP_004886996.1| DNA polymerase I [Tetragenococcus halophilus NBRC 12172]
gi|348601786|dbj|BAK94832.1| DNA polymerase I [Tetragenococcus halophilus NBRC 12172]
Length = 881
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
E A KY LKP Q +D+ L GD +DNIPGV IGD A++L+ ++ + E EM
Sbjct: 168 EHIAEKYDGLKPKQIIDMKGLAGDSSDNIPGVTKIGDKTAIKLLNQYDSVEGVYEHIDEM 227
>gi|253682515|ref|ZP_04863312.1| DNA polymerase I [Clostridium botulinum D str. 1873]
gi|253562227|gb|EES91679.1| DNA polymerase I [Clostridium botulinum D str. 1873]
Length = 881
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+ P+QF+DV L+GDK+DNIPGV GIG A +LI ++G +
Sbjct: 171 EVTPTQFIDVKGLMGDKSDNIPGVPGIGTKTAFKLIKEYGSI 212
>gi|428215911|ref|YP_007089055.1| DNA polymerase I [Oscillatoria acuminata PCC 6304]
gi|428004292|gb|AFY85135.1| DNA polymerase I [Oscillatoria acuminata PCC 6304]
Length = 973
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG E K G + P VD +L GD +DNIPGV+GIGD A++L+T +G L
Sbjct: 176 FGPEQVQEKMG-IPPELVVDYKALCGDTSDNIPGVKGIGDKTAIKLLTSYGSL 227
>gi|325265069|ref|ZP_08131796.1| DNA polymerase I [Clostridium sp. D5]
gi|324029759|gb|EGB91047.1| DNA polymerase I [Clostridium sp. D5]
Length = 871
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
D KYG + P++F+DV +L+GD +DNIPGV G+G+ A ++I ++G +
Sbjct: 166 DVKEKYG-VTPTEFIDVKALMGDASDNIPGVPGVGEKTATKIIVEYGTI 213
>gi|189218501|ref|YP_001939142.1| 5'-3' exonuclease [Methylacidiphilum infernorum V4]
gi|189185359|gb|ACD82544.1| 5'-3' exonuclease [Methylacidiphilum infernorum V4]
Length = 296
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G + K+ +KPSQ DV++L+GD DNIPGVEGIG A + I ++G L
Sbjct: 156 LGQREIEEKW-SVKPSQIPDVLALIGDSVDNIPGVEGIGKKTATKWIIQYGSL 207
>gi|307721272|ref|YP_003892412.1| DNA polymerase I [Sulfurimonas autotrophica DSM 16294]
gi|306979365|gb|ADN09400.1| DNA polymerase I [Sulfurimonas autotrophica DSM 16294]
Length = 907
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P QF+D S++GD ADN+PGV+GIG V A +L+ ++G L
Sbjct: 166 KYG-VTPKQFIDYQSILGDSADNVPGVKGIGKVGAEKLLKEYGTL 209
>gi|262277731|ref|ZP_06055524.1| DNA polymerase I [alpha proteobacterium HIMB114]
gi|262224834|gb|EEY75293.1| DNA polymerase I [alpha proteobacterium HIMB114]
Length = 925
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+G + P + +DV SL GD DNIPGV GIG A +LI +FG L
Sbjct: 167 GIEEVKEKFG-VPPEKVIDVQSLAGDSVDNIPGVPGIGVKTAAELINQFGSL 217
>gi|227499957|ref|ZP_03930050.1| possible DNA-directed DNA polymerase I [Anaerococcus tetradius ATCC
35098]
gi|227218066|gb|EEI83339.1| possible DNA-directed DNA polymerase I [Anaerococcus tetradius ATCC
35098]
Length = 880
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P Q +DV L GDK+DNIPGVEGIG +A++ I K+G +
Sbjct: 172 LTPKQLIDVKGLEGDKSDNIPGVEGIGPKKAIEFIQKYGSI 212
>gi|302340150|ref|YP_003805356.1| DNA polymerase I [Spirochaeta smaragdinae DSM 11293]
gi|301637335|gb|ADK82762.1| DNA polymerase I [Spirochaeta smaragdinae DSM 11293]
Length = 911
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G +D ++G ++ Q VD +SL GD+ADN+PGV+GIG A +L+TKFG L
Sbjct: 166 GRDDVFDQWG-VEADQIVDYLSLTGDQADNVPGVKGIGPKTASKLLTKFGDL 216
>gi|419760900|ref|ZP_14287162.1| DNA polymerase I [Thermosipho africanus H17ap60334]
gi|407513991|gb|EKF48859.1| DNA polymerase I [Thermosipho africanus H17ap60334]
Length = 892
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P QF D +SLVGD+ DNIPGV+GIG AV L+ K+ L
Sbjct: 172 KYG-ISPEQFKDYLSLVGDQIDNIPGVKGIGKKTAVSLLKKYNSL 215
>gi|15614743|ref|NP_243046.1| 5'-3' exonuclease [Bacillus halodurans C-125]
gi|17366931|sp|Q9KAV6.1|EX53_BACHD RecName: Full=5'-3' exonuclease
gi|10174799|dbj|BAB05899.1| 5'-3' exonuclease [Bacillus halodurans C-125]
Length = 303
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+F Y + P+Q+VDV +L+GDK+DNIPG G+G+ A+ LI ++G +
Sbjct: 171 ENFRNDY-NISPAQWVDVKALLGDKSDNIPGCPGVGEKSALPLIQQYGTI 219
>gi|301062352|ref|ZP_07203015.1| DNA-directed DNA polymerase [delta proteobacterium NaphS2]
gi|300443556|gb|EFK07658.1| DNA-directed DNA polymerase [delta proteobacterium NaphS2]
Length = 893
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 6 MEDFARKYGELK------PSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M+D Y LK P +F+DV+ L GD +DNIPGV G+G+ AV L+ +FG L
Sbjct: 154 MKDKITDYDSLKSAYGFEPEKFIDVMGLSGDTSDNIPGVRGVGEKTAVSLVREFGSL 210
>gi|410729571|ref|ZP_11367647.1| DNA polymerase I (3'-5'-exonuclease and polymerase domain
containing protein) [Clostridium sp. Maddingley
MBC34-26]
gi|410595527|gb|EKQ50233.1| DNA polymerase I (3'-5'-exonuclease and polymerase domain
containing protein) [Clostridium sp. Maddingley
MBC34-26]
Length = 867
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+ P QF+DV L+GDK+DNIPGV G+G+ A +LI ++G +
Sbjct: 169 EITPDQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSI 210
>gi|359410902|ref|ZP_09203367.1| DNA polymerase I [Clostridium sp. DL-VIII]
gi|357169786|gb|EHI97960.1| DNA polymerase I [Clostridium sp. DL-VIII]
Length = 867
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 2 ASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A + E F ++ E+ P QF+DV L+GDK+DNIPGV G+G+ A +LI ++G +
Sbjct: 157 AVYDEEAFINEF-EVTPHQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSI 210
>gi|315640780|ref|ZP_07895882.1| DNA-directed DNA polymerase I [Enterococcus italicus DSM 15952]
gi|315483535|gb|EFU74029.1| DNA-directed DNA polymerase I [Enterococcus italicus DSM 15952]
Length = 881
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ ++ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ +FG
Sbjct: 162 IEAYTPESIAEKYQGLVPKQIIDMKGLAGDSSDNIPGVTKIGEKTAIKLLNQFG 215
>gi|431412450|ref|ZP_19511885.1| DNA polymerase I [Enterococcus faecium E1630]
gi|431759338|ref|ZP_19547952.1| DNA polymerase I [Enterococcus faecium E3346]
gi|430589405|gb|ELB27533.1| DNA polymerase I [Enterococcus faecium E1630]
gi|430626138|gb|ELB62724.1| DNA polymerase I [Enterococcus faecium E3346]
Length = 881
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHLAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|406958798|gb|EKD86340.1| DNA polymerase I [uncultured bacterium]
Length = 340
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
M F E KYG LKP QF+D +LVGD +DN PGV GIG A LI K+
Sbjct: 184 MIFFDTEKVVEKYG-LKPHQFIDYKALVGDPSDNYPGVSGIGPKTASGLIGKY 235
>gi|253577306|ref|ZP_04854624.1| DNA polymerase I [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843310|gb|EES71340.1| DNA polymerase I [Paenibacillus sp. oral taxon 786 str. D14]
Length = 886
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+G + KYG LKP Q +D+ L+GD +DNIPGV GIG+ A++L+ ++G
Sbjct: 159 YGPQQIEEKYG-LKPLQIIDLKGLMGDTSDNIPGVPGIGEKTALKLLHQYG 208
>gi|150021780|ref|YP_001307134.1| DNA polymerase I [Thermosipho melanesiensis BI429]
gi|149794301|gb|ABR31749.1| DNA polymerase I [Thermosipho melanesiensis BI429]
Length = 890
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG P QF D +SLVGD+ DNIPGV+GIG AV L+ K+G +
Sbjct: 172 KYGVF-PEQFGDYLSLVGDQIDNIPGVKGIGKKTAVSLLKKYGTI 215
>gi|410668137|ref|YP_006920508.1| DNA polymerase I [Thermacetogenium phaeum DSM 12270]
gi|409105884|gb|AFV12009.1| DNA polymerase I [Thermacetogenium phaeum DSM 12270]
Length = 875
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E +KYG + P+Q D+ L GD++DNIPGV GIG+ AV+L+ +FG L
Sbjct: 152 LECFTPETVRKKYG-IDPAQVPDLKGLKGDQSDNIPGVPGIGEKTAVRLLNQFGSL 206
>gi|329767425|ref|ZP_08258950.1| hypothetical protein HMPREF0428_00647 [Gemella haemolysans M341]
gi|328836114|gb|EGF85805.1| hypothetical protein HMPREF0428_00647 [Gemella haemolysans M341]
Length = 879
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KYG L P Q VD+ L+GDK+DNIPG+ G+G+ A++L+T++
Sbjct: 162 EFIAEKYG-LTPEQIVDMKGLMGDKSDNIPGIAGVGEKTAIKLLTEY 207
>gi|428318737|ref|YP_007116619.1| DNA polymerase I [Oscillatoria nigro-viridis PCC 7112]
gi|428242417|gb|AFZ08203.1| DNA polymerase I [Oscillatoria nigro-viridis PCC 7112]
Length = 1018
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G E+ K G L P Q +D +L GDK+DNIPGV+GIGD A+QL+ + L
Sbjct: 177 YGPEEVKAKLGIL-PEQVIDYKALCGDKSDNIPGVKGIGDKTALQLLEAYNSL 228
>gi|296132483|ref|YP_003639730.1| DNA polymerase I [Thermincola potens JR]
gi|296031061|gb|ADG81829.1| DNA polymerase I [Thermincola potens JR]
Length = 886
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
A +YG LKP+Q +D+ L+GD +DNIPGV GIG+ A +L+ ++G
Sbjct: 167 AERYG-LKPAQIIDMKGLMGDTSDNIPGVPGIGEKTAAKLVREYG 210
>gi|374296944|ref|YP_005047135.1| DNA polymerase I [Clostridium clariflavum DSM 19732]
gi|359826438|gb|AEV69211.1| DNA polymerase I [Clostridium clariflavum DSM 19732]
Length = 896
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ +E KY +++P QF+DV +L+GD +DNIPGV GIG+ A+ LI +G +
Sbjct: 166 YNLETIHGKY-KIEPVQFIDVKALMGDTSDNIPGVPGIGEKTALDLIQNYGTI 217
>gi|219815961|gb|ACL37082.1| DNA polymerase I [uncultured bacterium]
Length = 942
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E+ +K+ ++ +D++ L+GDK DNIPG+ G+G+ A+QLI FG +
Sbjct: 167 LGTEEICKKWEIRNVAELIDILGLMGDKVDNIPGIPGVGEKTAIQLIKDFGSI 219
>gi|428205552|ref|YP_007089905.1| DNA polymerase I [Chroococcidiopsis thermalis PCC 7203]
gi|428007473|gb|AFY86036.1| DNA polymerase I [Chroococcidiopsis thermalis PCC 7203]
Length = 999
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 ASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A F +E K G + PSQ VD +L GD +DNIPGV GIG+ A+QL++ + L
Sbjct: 186 AEFSVEQVREKMG-VSPSQVVDFKALCGDPSDNIPGVRGIGEKTAIQLLSTYDNL 239
>gi|241889843|ref|ZP_04777141.1| DNA polymerase I [Gemella haemolysans ATCC 10379]
gi|241863465|gb|EER67849.1| DNA polymerase I [Gemella haemolysans ATCC 10379]
Length = 879
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KYG L P Q VD+ L+GDK+DNIPG+ G+G+ A++L+T++
Sbjct: 162 EFIAEKYG-LTPGQIVDMKGLMGDKSDNIPGIAGVGEKTAIKLLTEY 207
>gi|288556758|ref|YP_003428693.1| 5'-3' exonuclease [Bacillus pseudofirmus OF4]
gi|288547918|gb|ADC51801.1| 5'-3' exonuclease [Bacillus pseudofirmus OF4]
Length = 300
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 9 FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
F +YG + P+Q++DV +L+GDK+DNIPG G+G+ A+ LI ++G
Sbjct: 173 FEEEYG-ITPTQWIDVKALLGDKSDNIPGCPGVGEKSALPLIQQYG 217
>gi|376261726|ref|YP_005148446.1| DNA polymerase I [Clostridium sp. BNL1100]
gi|373945720|gb|AEY66641.1| DNA polymerase I [Clostridium sp. BNL1100]
Length = 896
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KYG + P Q +DV L+GD +DNIPGV GIG+ A+ LI KF L
Sbjct: 167 YDYEKVIEKYG-VTPGQLIDVKGLMGDTSDNIPGVPGIGEKTAIDLINKFNSL 218
>gi|242373981|ref|ZP_04819555.1| DNA-directed DNA polymerase [Staphylococcus epidermidis M23864:W1]
gi|242348335|gb|EES39937.1| DNA-directed DNA polymerase [Staphylococcus epidermidis M23864:W1]
Length = 891
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L+P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 180 AEKYNGLEPKQIIDMKGLMGDTSDNIPGVPGVGEKTAIKLLNQF 223
>gi|193216333|ref|YP_001997532.1| DNA polymerase I [Chloroherpeton thalassium ATCC 35110]
gi|193089810|gb|ACF15085.1| DNA polymerase I [Chloroherpeton thalassium ATCC 35110]
Length = 931
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECF 63
+G E+ YG + P QF+D+++L+GD +DNIPG GIG A LI ++G + E
Sbjct: 172 YGAEEVKSHYG-VYPEQFLDMLALMGDSSDNIPGAPGIGPKTAANLINRYGSIAKIYENL 230
Query: 64 SEM 66
E+
Sbjct: 231 YEL 233
>gi|39995648|ref|NP_951599.1| DNA polymerase I [Geobacter sulfurreducens PCA]
gi|409911106|ref|YP_006889571.1| DNA polymerase I [Geobacter sulfurreducens KN400]
gi|39982411|gb|AAR33872.1| DNA polymerase I [Geobacter sulfurreducens PCA]
gi|298504670|gb|ADI83393.1| DNA polymerase I [Geobacter sulfurreducens KN400]
Length = 891
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + ++G + P Q +D++ L GD +DNIPGV GIG+ A +LI +FG L
Sbjct: 158 GIPEVVERFG-VGPGQVIDILGLAGDTSDNIPGVPGIGEKTATKLIQEFGSL 208
>gi|390456619|ref|ZP_10242147.1| DNA polymerase I [Paenibacillus peoriae KCTC 3763]
Length = 884
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
++G E +YG LKP Q +D+ L+GD +DNIPG+ G+G+ A++L+ ++G
Sbjct: 158 TYGPEQIQERYG-LKPLQIIDLKGLMGDTSDNIPGIPGVGEKTALKLLHQYG 208
>gi|73662384|ref|YP_301165.1| DNA polymerase I [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|72494899|dbj|BAE18220.1| DNA polymerase I [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 876
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML--VFN 59
E A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ KF + V+N
Sbjct: 162 EFIAEKYDGLVPNQIIDMKGLMGDASDNIPGVAGVGEKTAIKLLKKFSTVENVYN 216
>gi|335040619|ref|ZP_08533744.1| DNA polymerase I [Caldalkalibacillus thermarum TA2.A1]
gi|334179483|gb|EGL82123.1| DNA polymerase I [Caldalkalibacillus thermarum TA2.A1]
Length = 881
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ + KYG LKP Q +D+ L+GD +DNIPGV G+G+ A++L+ +FG +
Sbjct: 160 YDQQKLEEKYG-LKPWQIIDMKGLMGDSSDNIPGVPGVGEKTALKLLHQFGSI 211
>gi|424722540|ref|ZP_18151590.1| DNA-directed DNA polymerase, partial [Enterococcus faecalis ERV73]
gi|402401870|gb|EJV34611.1| DNA-directed DNA polymerase, partial [Enterococcus faecalis ERV73]
Length = 873
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 153 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 212
Query: 61 ECFSEM 66
E EM
Sbjct: 213 ENIDEM 218
>gi|424676417|ref|ZP_18113290.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV103]
gi|424679374|ref|ZP_18116199.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV116]
gi|424682425|ref|ZP_18119196.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV129]
gi|424686084|ref|ZP_18122755.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV25]
gi|424689280|ref|ZP_18125866.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV31]
gi|424692794|ref|ZP_18129270.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV37]
gi|424697104|ref|ZP_18133440.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV41]
gi|424699383|ref|ZP_18135603.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV62]
gi|424703823|ref|ZP_18139947.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV63]
gi|424705988|ref|ZP_18142002.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV65]
gi|424716175|ref|ZP_18145489.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV68]
gi|424719116|ref|ZP_18148338.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV72]
gi|424726298|ref|ZP_18154966.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV81]
gi|424734501|ref|ZP_18163013.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV85]
gi|424746550|ref|ZP_18174781.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV93]
gi|424757301|ref|ZP_18185055.1| DNA-directed DNA polymerase [Enterococcus faecalis R508]
gi|402356957|gb|EJU91675.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV103]
gi|402357070|gb|EJU91785.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV116]
gi|402367721|gb|EJV02059.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV129]
gi|402368028|gb|EJV02355.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV25]
gi|402369017|gb|EJV03315.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV31]
gi|402376341|gb|EJV10286.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV62]
gi|402376657|gb|EJV10591.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV41]
gi|402376864|gb|EJV10782.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV37]
gi|402383748|gb|EJV17331.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV63]
gi|402388520|gb|EJV21955.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV68]
gi|402388804|gb|EJV22230.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV65]
gi|402397070|gb|EJV30106.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV72]
gi|402399865|gb|EJV32720.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV81]
gi|402407374|gb|EJV39906.1| DNA-directed DNA polymerase [Enterococcus faecalis R508]
gi|402407907|gb|EJV40405.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV85]
gi|402409277|gb|EJV41709.1| DNA-directed DNA polymerase [Enterococcus faecalis ERV93]
Length = 882
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 ENIDEM 227
>gi|333996092|ref|YP_004528705.1| DNA-directed DNA polymerase [Treponema azotonutricium ZAS-9]
gi|333734679|gb|AEF80628.1| DNA-directed DNA polymerase [Treponema azotonutricium ZAS-9]
Length = 952
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 34/41 (82%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P + +D++SL GD +DN+PGV+G+G+V AV+L++++G L
Sbjct: 194 VNPDKVLDLLSLTGDSSDNVPGVKGVGEVTAVKLMSRYGSL 234
>gi|417644708|ref|ZP_12294680.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein,
partial [Staphylococcus warneri VCU121]
gi|330684529|gb|EGG96240.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Staphylococcus epidermidis VCU121]
Length = 387
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|422699767|ref|ZP_16757628.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1342]
gi|315171781|gb|EFU15798.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1342]
Length = 882
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 ENIDEM 227
>gi|29375463|ref|NP_814617.1| DNA polymerase I [Enterococcus faecalis V583]
gi|227554989|ref|ZP_03985036.1| DNA polymerase I [Enterococcus faecalis HH22]
gi|229548814|ref|ZP_04437539.1| DNA polymerase I [Enterococcus faecalis ATCC 29200]
gi|255971330|ref|ZP_05421916.1| DNA polymerase A [Enterococcus faecalis T1]
gi|255973949|ref|ZP_05424535.1| DNA polymerase A [Enterococcus faecalis T2]
gi|256617748|ref|ZP_05474594.1| DNA polymerase A [Enterococcus faecalis ATCC 4200]
gi|256957263|ref|ZP_05561434.1| DNA polymerase A [Enterococcus faecalis DS5]
gi|256960003|ref|ZP_05564174.1| DNA polymerase A [Enterococcus faecalis Merz96]
gi|257077763|ref|ZP_05572124.1| DNA polymerase A [Enterococcus faecalis JH1]
gi|257089289|ref|ZP_05583650.1| DNA polymerase I [Enterococcus faecalis CH188]
gi|257418473|ref|ZP_05595467.1| DNA polymerase A [Enterococcus faecalis T11]
gi|257421124|ref|ZP_05598114.1| DNA polymerase I [Enterococcus faecalis X98]
gi|293383756|ref|ZP_06629663.1| DNA polymerase I [Enterococcus faecalis R712]
gi|293388768|ref|ZP_06633261.1| DNA polymerase I [Enterococcus faecalis S613]
gi|294781289|ref|ZP_06746635.1| DNA-directed DNA polymerase [Enterococcus faecalis PC1.1]
gi|307267954|ref|ZP_07549342.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4248]
gi|307278426|ref|ZP_07559501.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0860]
gi|307286686|ref|ZP_07566772.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0109]
gi|312901580|ref|ZP_07760853.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0470]
gi|312904438|ref|ZP_07763597.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0635]
gi|312907028|ref|ZP_07766024.1| DNA-directed DNA polymerase [Enterococcus faecalis DAPTO 512]
gi|312952854|ref|ZP_07771716.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0102]
gi|312978714|ref|ZP_07790441.1| DNA-directed DNA polymerase [Enterococcus faecalis DAPTO 516]
gi|397699268|ref|YP_006537056.1| DNA polymerase I [Enterococcus faecalis D32]
gi|422689765|ref|ZP_16747869.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0630]
gi|422692165|ref|ZP_16750187.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0031]
gi|422694479|ref|ZP_16752470.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4244]
gi|422707336|ref|ZP_16765031.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0043]
gi|422711659|ref|ZP_16768586.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0027]
gi|422713360|ref|ZP_16770110.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0309A]
gi|422717614|ref|ZP_16774298.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0309B]
gi|422720357|ref|ZP_16776975.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0017]
gi|422727398|ref|ZP_16783839.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0312]
gi|422729866|ref|ZP_16786261.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0012]
gi|422731007|ref|ZP_16787388.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0645]
gi|422735316|ref|ZP_16791590.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1341]
gi|422738965|ref|ZP_16794150.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2141]
gi|422866951|ref|ZP_16913555.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1467]
gi|428766384|ref|YP_007152495.1| DNA polymerase I [Enterococcus faecalis str. Symbioflor 1]
gi|29342923|gb|AAO80687.1| DNA polymerase I [Enterococcus faecalis V583]
gi|227175871|gb|EEI56843.1| DNA polymerase I [Enterococcus faecalis HH22]
gi|229306043|gb|EEN72039.1| DNA polymerase I [Enterococcus faecalis ATCC 29200]
gi|255962348|gb|EET94824.1| DNA polymerase A [Enterococcus faecalis T1]
gi|255966821|gb|EET97443.1| DNA polymerase A [Enterococcus faecalis T2]
gi|256597275|gb|EEU16451.1| DNA polymerase A [Enterococcus faecalis ATCC 4200]
gi|256947759|gb|EEU64391.1| DNA polymerase A [Enterococcus faecalis DS5]
gi|256950499|gb|EEU67131.1| DNA polymerase A [Enterococcus faecalis Merz96]
gi|256985793|gb|EEU73095.1| DNA polymerase A [Enterococcus faecalis JH1]
gi|256998101|gb|EEU84621.1| DNA polymerase I [Enterococcus faecalis CH188]
gi|257160301|gb|EEU90261.1| DNA polymerase A [Enterococcus faecalis T11]
gi|257162948|gb|EEU92908.1| DNA polymerase I [Enterococcus faecalis X98]
gi|291078832|gb|EFE16196.1| DNA polymerase I [Enterococcus faecalis R712]
gi|291081925|gb|EFE18888.1| DNA polymerase I [Enterococcus faecalis S613]
gi|294451625|gb|EFG20081.1| DNA-directed DNA polymerase [Enterococcus faecalis PC1.1]
gi|295113921|emb|CBL32558.1| DNA polymerase I [Enterococcus sp. 7L76]
gi|306502164|gb|EFM71448.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0109]
gi|306504932|gb|EFM74127.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0860]
gi|306515595|gb|EFM84122.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4248]
gi|310627013|gb|EFQ10296.1| DNA-directed DNA polymerase [Enterococcus faecalis DAPTO 512]
gi|310629370|gb|EFQ12653.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0102]
gi|310632136|gb|EFQ15419.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0635]
gi|311288421|gb|EFQ66977.1| DNA-directed DNA polymerase [Enterococcus faecalis DAPTO 516]
gi|311291375|gb|EFQ69931.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0470]
gi|315032493|gb|EFT44425.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0017]
gi|315034273|gb|EFT46205.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0027]
gi|315145154|gb|EFT89170.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2141]
gi|315148036|gb|EFT92052.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4244]
gi|315149639|gb|EFT93655.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0012]
gi|315152951|gb|EFT96967.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0031]
gi|315155181|gb|EFT99197.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0043]
gi|315157509|gb|EFU01526.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0312]
gi|315163062|gb|EFU07079.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0645]
gi|315167987|gb|EFU12004.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1341]
gi|315574209|gb|EFU86400.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0309B]
gi|315577339|gb|EFU89530.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0630]
gi|315581648|gb|EFU93839.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0309A]
gi|329577869|gb|EGG59290.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1467]
gi|397335907|gb|AFO43579.1| DNA polymerase I [Enterococcus faecalis D32]
gi|427184557|emb|CCO71781.1| DNA polymerase I [Enterococcus faecalis str. Symbioflor 1]
Length = 882
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 ENIDEM 227
>gi|422703429|ref|ZP_16761251.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1302]
gi|315165261|gb|EFU09278.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1302]
Length = 882
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 ENIDEM 227
>gi|257083792|ref|ZP_05578153.1| DNA polymerase A [Enterococcus faecalis Fly1]
gi|300859704|ref|ZP_07105792.1| DNA-directed DNA polymerase [Enterococcus faecalis TUSoD Ef11]
gi|256991822|gb|EEU79124.1| DNA polymerase A [Enterococcus faecalis Fly1]
gi|300850522|gb|EFK78271.1| DNA-directed DNA polymerase [Enterococcus faecalis TUSoD Ef11]
Length = 848
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 128 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 187
Query: 61 ECFSEM 66
E EM
Sbjct: 188 ENIDEM 193
>gi|445059424|ref|YP_007384828.1| DNA polymerase I [Staphylococcus warneri SG1]
gi|443425481|gb|AGC90384.1| DNA polymerase I [Staphylococcus warneri SG1]
Length = 876
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|379796037|ref|YP_005326035.1| DNA polymerase I [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356873027|emb|CCE59366.1| DNA polymerase I [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 876
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E + KY L PSQ +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFISEKYNGLTPSQIIDMKGLMGDSSDNIPGVAGVGEKTAIKLLNQF 208
>gi|422696554|ref|ZP_16754511.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1346]
gi|315174878|gb|EFU18895.1| DNA-directed DNA polymerase [Enterococcus faecalis TX1346]
Length = 882
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 ENIDEM 227
>gi|257081123|ref|ZP_05575484.1| DNA polymerase A [Enterococcus faecalis E1Sol]
gi|256989153|gb|EEU76455.1| DNA polymerase A [Enterococcus faecalis E1Sol]
Length = 882
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 ENIDEM 227
>gi|256854276|ref|ZP_05559640.1| DNA polymerase I [Enterococcus faecalis T8]
gi|307275295|ref|ZP_07556438.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2134]
gi|307290893|ref|ZP_07570783.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0411]
gi|422685454|ref|ZP_16743670.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4000]
gi|256709836|gb|EEU24880.1| DNA polymerase I [Enterococcus faecalis T8]
gi|306497963|gb|EFM67490.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0411]
gi|306507929|gb|EFM77056.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2134]
gi|315029747|gb|EFT41679.1| DNA-directed DNA polymerase [Enterococcus faecalis TX4000]
Length = 882
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 ENIDEM 227
>gi|359425940|ref|ZP_09217030.1| DNA polymerase I [Gordonia amarae NBRC 15530]
gi|358238799|dbj|GAB06612.1| DNA polymerase I [Gordonia amarae NBRC 15530]
Length = 924
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E+ +KYG + P+Q+ D+ +L GD +DN+PGV G+GD A + I ++G L
Sbjct: 186 LTRFTPEEVEKKYG-VTPTQYPDIAALRGDSSDNLPGVPGVGDKTAAKWIRQYGSL 240
>gi|430358757|ref|ZP_19425517.1| DNA polymerase A [Enterococcus faecalis OG1X]
gi|430366999|ref|ZP_19427712.1| DNA polymerase A [Enterococcus faecalis M7]
gi|429513582|gb|ELA03161.1| DNA polymerase A [Enterococcus faecalis OG1X]
gi|429516813|gb|ELA06289.1| DNA polymerase A [Enterococcus faecalis M7]
Length = 848
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 128 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 187
Query: 61 ECFSEM 66
E EM
Sbjct: 188 ENIDEM 193
>gi|310641223|ref|YP_003945981.1| DNA polymerase i [Paenibacillus polymyxa SC2]
gi|386040274|ref|YP_005959228.1| DNA polymerase I [Paenibacillus polymyxa M1]
gi|309246173|gb|ADO55740.1| DNA polymerase I [Paenibacillus polymyxa SC2]
gi|343096312|emb|CCC84521.1| DNA polymerase I [Paenibacillus polymyxa M1]
Length = 884
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
++G E +YG LKP Q +D+ L+GD +DNIPG+ G+G+ A++L+ ++G
Sbjct: 158 TYGPEQIQERYG-LKPLQIIDLKGLMGDTSDNIPGIPGVGEKTALKLLHQYG 208
>gi|256761634|ref|ZP_05502214.1| DNA polymerase A [Enterococcus faecalis T3]
gi|256964301|ref|ZP_05568472.1| DNA polymerase A [Enterococcus faecalis HIP11704]
gi|257086217|ref|ZP_05580578.1| DNA polymerase A [Enterococcus faecalis D6]
gi|257415442|ref|ZP_05592436.1| DNA polymerase A [Enterococcus faecalis ARO1/DG]
gi|307271878|ref|ZP_07553146.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0855]
gi|384512570|ref|YP_005707663.1| DNA-directed DNA polymerase I [Enterococcus faecalis OG1RF]
gi|384517926|ref|YP_005705231.1| DNA polymerase I [Enterococcus faecalis 62]
gi|422722808|ref|ZP_16779357.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2137]
gi|424671006|ref|ZP_18108021.1| DNA-directed DNA polymerase [Enterococcus faecalis 599]
gi|256682885|gb|EEU22580.1| DNA polymerase A [Enterococcus faecalis T3]
gi|256954797|gb|EEU71429.1| DNA polymerase A [Enterococcus faecalis HIP11704]
gi|256994247|gb|EEU81549.1| DNA polymerase A [Enterococcus faecalis D6]
gi|257157270|gb|EEU87230.1| DNA polymerase A [Enterococcus faecalis ARO1/DG]
gi|306511384|gb|EFM80386.1| DNA-directed DNA polymerase [Enterococcus faecalis TX0855]
gi|315027064|gb|EFT38996.1| DNA-directed DNA polymerase [Enterococcus faecalis TX2137]
gi|323480059|gb|ADX79498.1| DNA polymerase I [Enterococcus faecalis 62]
gi|327534459|gb|AEA93293.1| DNA-directed DNA polymerase I [Enterococcus faecalis OG1RF]
gi|402359566|gb|EJU94191.1| DNA-directed DNA polymerase [Enterococcus faecalis 599]
Length = 882
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 ENIDEM 227
>gi|154482924|ref|ZP_02025372.1| hypothetical protein EUBVEN_00621 [Eubacterium ventriosum ATCC
27560]
gi|149736208|gb|EDM52094.1| DNA-directed DNA polymerase [Eubacterium ventriosum ATCC 27560]
Length = 877
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 11 RKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
RK ++ P++F+DV +L+GD +DNIPGV GIG+ A +I++FG +
Sbjct: 167 RKLYKVTPTEFIDVKALMGDSSDNIPGVPGIGEKGATAIISQFGSI 212
>gi|332300236|ref|YP_004442157.1| DNA polymerase I [Porphyromonas asaccharolytica DSM 20707]
gi|332177299|gb|AEE12989.1| DNA polymerase I [Porphyromonas asaccharolytica DSM 20707]
Length = 948
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
G E+ KYG P Q +D + LVGD +DN+PG GIG V A +L+ +F
Sbjct: 161 LGAEEITAKYGIRYPLQMIDYLGLVGDSSDNVPGCPGIGKVAAQRLLEEF 210
>gi|313885797|ref|ZP_07819541.1| DNA-directed DNA polymerase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924751|gb|EFR35516.1| DNA-directed DNA polymerase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 948
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
G E+ KYG P Q +D + LVGD +DN+PG GIG V A +L+ +F
Sbjct: 161 LGAEEITAKYGIRYPLQMIDYLGLVGDSSDNVPGCPGIGKVAAQRLLEEF 210
>gi|229546723|ref|ZP_04435448.1| DNA polymerase I [Enterococcus faecalis TX1322]
gi|229308072|gb|EEN74059.1| DNA polymerase I [Enterococcus faecalis TX1322]
Length = 837
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 117 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 176
Query: 61 ECFSEM 66
E EM
Sbjct: 177 ENIDEM 182
>gi|228470367|ref|ZP_04055270.1| DNA polymerase type I [Porphyromonas uenonis 60-3]
gi|228307949|gb|EEK16832.1| DNA polymerase type I [Porphyromonas uenonis 60-3]
Length = 948
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
G E+ KYG P Q +D + LVGD +DN+PG GIG V A +L+ +F
Sbjct: 161 LGAEEITAKYGIRYPLQMIDYLGLVGDSSDNVPGCPGIGKVAAQRLLEEF 210
>gi|386811906|ref|ZP_10099131.1| DNA polymerase I [planctomycete KSU-1]
gi|386404176|dbj|GAB62012.1| DNA polymerase I [planctomycete KSU-1]
Length = 888
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++P Q VDV++L GD DN+PGV GIG+ A++LI K+G L
Sbjct: 168 IRPDQVVDVLALSGDAVDNVPGVPGIGNKTALELIQKWGSL 208
>gi|421871274|ref|ZP_16302896.1| DNA polymerase I [Brevibacillus laterosporus GI-9]
gi|372459901|emb|CCF12445.1| DNA polymerase I [Brevibacillus laterosporus GI-9]
Length = 897
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ E+ KYG LKP Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 159 YSTEEIFEKYG-LKPEQIIDLKGLMGDSSDNIPGVPGVGEKTALKLLHQF 207
>gi|257064003|ref|YP_003143675.1| DNA polymerase I [Slackia heliotrinireducens DSM 20476]
gi|256791656|gb|ACV22326.1| DNA polymerase I [Slackia heliotrinireducens DSM 20476]
Length = 878
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+A +G + +YG + P QF D + L GD ADNIPGV GIGD A +L+ +G +
Sbjct: 158 VAIYGPAEVEERYG-VTPEQFPDFLGLKGDSADNIPGVPGIGDKTAAKLLQNYGTM 212
>gi|188997399|ref|YP_001931650.1| 5'-3' exonuclease [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932466|gb|ACD67096.1| 5'-3' exonuclease [Sulfurihydrogenibium sp. YO3AOP1]
Length = 299
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG + P QF+D ++++GD DNIPG++GIG A L+ +FG L
Sbjct: 159 EKIKEKYG-IHPQQFIDYLTMIGDAVDNIPGIKGIGPKTAAALLQEFGSL 207
>gi|428201187|ref|YP_007079776.1| DNA polymerase I [Pleurocapsa sp. PCC 7327]
gi|427978619|gb|AFY76219.1| DNA polymerase I [Pleurocapsa sp. PCC 7327]
Length = 974
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+KP Q VD +L GDK+DNIPGV GIG+ AV+L+ ++G L
Sbjct: 196 IKPYQVVDYKALCGDKSDNIPGVRGIGEKTAVKLLEEYGSL 236
>gi|110802827|ref|YP_699271.1| DNA polymerase I [Clostridium perfringens SM101]
gi|110683328|gb|ABG86698.1| DNA polymerase I [Clostridium perfringens SM101]
Length = 866
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|18310976|ref|NP_562910.1| DNA polymerase I [Clostridium perfringens str. 13]
gi|18145658|dbj|BAB81700.1| DNA polymerase I [Clostridium perfringens str. 13]
Length = 866
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|408675504|ref|YP_006875252.1| DNA polymerase I [Emticicia oligotrophica DSM 17448]
gi|387857128|gb|AFK05225.1| DNA polymerase I [Emticicia oligotrophica DSM 17448]
Length = 960
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+++ K+G P Q VD++ L+GD DNIPGV G+G+ A +LI +G +
Sbjct: 163 LGVKEVCEKWGIEHPEQVVDILGLMGDAVDNIPGVPGVGEKTAAKLIATYGSI 215
>gi|334119152|ref|ZP_08493239.1| DNA polymerase I [Microcoleus vaginatus FGP-2]
gi|333458623|gb|EGK87240.1| DNA polymerase I [Microcoleus vaginatus FGP-2]
Length = 1011
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G E K G L P Q VD +L GDK+DNIPGV+GIGD A+QL+ + L
Sbjct: 184 YGPEAVKEKLGIL-PQQVVDYKALCGDKSDNIPGVKGIGDKTALQLLEAYNSL 235
>gi|168208695|ref|ZP_02634320.1| DNA polymerase I [Clostridium perfringens B str. ATCC 3626]
gi|170713068|gb|EDT25250.1| DNA polymerase I [Clostridium perfringens B str. ATCC 3626]
Length = 866
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|308068368|ref|YP_003869973.1| DNA polymerase I [Paenibacillus polymyxa E681]
gi|305857647|gb|ADM69435.1| DNA polymerase I (POL I) [Paenibacillus polymyxa E681]
Length = 884
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
++G E +YG LKP Q +D+ L+GD +DNIPG+ G+G+ A++L+ ++G
Sbjct: 158 TYGPEQIQERYG-LKPLQIIDLKGLMGDTSDNIPGIPGVGEKTALKLLHQYG 208
>gi|224023510|ref|ZP_03641876.1| hypothetical protein BACCOPRO_00212 [Bacteroides coprophilus DSM
18228]
gi|224016732|gb|EEF74744.1| hypothetical protein BACCOPRO_00212 [Bacteroides coprophilus DSM
18228]
Length = 932
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G+E+ KY P Q +D++ L+GD +DNIPG G+G+ A +LI +FG
Sbjct: 171 GVEEVKNKYAIQSPLQVIDLLGLMGDASDNIPGCPGVGEKTAQKLIAQFG 220
>gi|182624402|ref|ZP_02952186.1| DNA polymerase I [Clostridium perfringens D str. JGS1721]
gi|177910405|gb|EDT72782.1| DNA polymerase I [Clostridium perfringens D str. JGS1721]
Length = 866
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|168215620|ref|ZP_02641245.1| DNA polymerase I [Clostridium perfringens NCTC 8239]
gi|182382103|gb|EDT79582.1| DNA polymerase I [Clostridium perfringens NCTC 8239]
Length = 866
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|168204822|ref|ZP_02630827.1| DNA polymerase I [Clostridium perfringens E str. JGS1987]
gi|170663672|gb|EDT16355.1| DNA polymerase I [Clostridium perfringens E str. JGS1987]
Length = 866
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|169343823|ref|ZP_02864822.1| DNA polymerase I [Clostridium perfringens C str. JGS1495]
gi|169298384|gb|EDS80474.1| DNA polymerase I [Clostridium perfringens C str. JGS1495]
Length = 866
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|110799426|ref|YP_696673.1| DNA polymerase I [Clostridium perfringens ATCC 13124]
gi|110674073|gb|ABG83060.1| DNA polymerase I [Clostridium perfringens ATCC 13124]
Length = 866
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|113474408|ref|YP_720469.1| DNA polymerase I [Trichodesmium erythraeum IMS101]
gi|110165456|gb|ABG49996.1| DNA polymerase I [Trichodesmium erythraeum IMS101]
Length = 1045
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F E+ K G L P+Q VD +L GDK+DNIPGV GIG AV+L+ ++G L
Sbjct: 171 FFPEEVKEKLGIL-PTQVVDYKALCGDKSDNIPGVRGIGQKTAVKLLNEYGCL 222
>gi|422874910|ref|ZP_16921395.1| DNA polymerase I [Clostridium perfringens F262]
gi|380304105|gb|EIA16397.1| DNA polymerase I [Clostridium perfringens F262]
Length = 866
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|375307904|ref|ZP_09773191.1| DNA polymerase i [Paenibacillus sp. Aloe-11]
gi|375080235|gb|EHS58456.1| DNA polymerase i [Paenibacillus sp. Aloe-11]
Length = 884
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
++G E +YG LKP Q +D+ L+GD +DNIPG+ G+G+ A++L+ ++G
Sbjct: 158 TYGPEQIQERYG-LKPLQIIDLKGLMGDTSDNIPGIPGVGEKTALKLLHQYG 208
>gi|422346660|ref|ZP_16427574.1| DNA polymerase I [Clostridium perfringens WAL-14572]
gi|373226205|gb|EHP48532.1| DNA polymerase I [Clostridium perfringens WAL-14572]
Length = 866
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|389578957|ref|ZP_10168984.1| DNA polymerase I [Desulfobacter postgatei 2ac9]
gi|389400592|gb|EIM62814.1| DNA polymerase I [Desulfobacter postgatei 2ac9]
Length = 896
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L+P QF+DV+ L GD +DNIPGV+G+G AV LI ++G +
Sbjct: 169 LEPEQFIDVLGLAGDTSDNIPGVKGVGMKTAVALIAEYGSI 209
>gi|168212970|ref|ZP_02638595.1| DNA polymerase I [Clostridium perfringens CPE str. F4969]
gi|170715581|gb|EDT27763.1| DNA polymerase I [Clostridium perfringens CPE str. F4969]
Length = 866
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + +YG + P+QF+DV L+GDK+DNIPGV G+G+ A +LI ++G
Sbjct: 159 YNYDRMVEEYG-VTPTQFIDVKGLMGDKSDNIPGVPGVGEKTAFKLIKEYG 208
>gi|402301039|ref|ZP_10820457.1| 5'-3' exonuclease [Bacillus alcalophilus ATCC 27647]
gi|401723846|gb|EJS97270.1| 5'-3' exonuclease [Bacillus alcalophilus ATCC 27647]
Length = 304
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ + DF + Y ++ P+Q++DV +L+GDK+DNIPG G+G+ A+ LI +
Sbjct: 169 YSLADFEKDY-QITPAQWIDVKALLGDKSDNIPGCAGVGEKSALPLIQTY 217
>gi|339007842|ref|ZP_08640416.1| DNA polymerase I [Brevibacillus laterosporus LMG 15441]
gi|338775045|gb|EGP34574.1| DNA polymerase I [Brevibacillus laterosporus LMG 15441]
Length = 897
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ E+ KYG LKP Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 159 YSTEEIFEKYG-LKPEQIIDLKGLMGDSSDNIPGVPGVGEKTALKLLHQF 207
>gi|404497831|ref|YP_006721937.1| DNA polymerase I [Geobacter metallireducens GS-15]
gi|418067867|ref|ZP_12705197.1| DNA polymerase I [Geobacter metallireducens RCH3]
gi|78195431|gb|ABB33198.1| DNA polymerase I [Geobacter metallireducens GS-15]
gi|373558046|gb|EHP84411.1| DNA polymerase I [Geobacter metallireducens RCH3]
Length = 892
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ D ++G + P +D++ L GD +DNIPGV GIG+ A++LI +FG L
Sbjct: 159 GIPDVQERFG-VGPEGVIDILGLAGDTSDNIPGVPGIGEKTAIKLIQEFGSL 209
>gi|418321401|ref|ZP_12932747.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Staphylococcus aureus subsp. aureus VCU006]
gi|365225633|gb|EHM66876.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Staphylococcus aureus subsp. aureus VCU006]
Length = 237
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|239637989|ref|ZP_04678950.1| DNA polymerase I [Staphylococcus warneri L37603]
gi|239596552|gb|EEQ79088.1| DNA polymerase I [Staphylococcus warneri L37603]
Length = 876
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|451981579|ref|ZP_21929931.1| DNA polymerase I [Nitrospina gracilis 3/211]
gi|451761252|emb|CCQ91195.1| DNA polymerase I [Nitrospina gracilis 3/211]
Length = 900
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG++D K+G ++P + ++V+ L+GD +D+IPGV+G+G A LI K+G +
Sbjct: 159 FGIDDVKEKFG-VEPERVIEVMGLMGDSSDHIPGVKGVGPKTATDLIQKYGSI 210
>gi|374323097|ref|YP_005076226.1| DNA polymerase i [Paenibacillus terrae HPL-003]
gi|357202106|gb|AET60003.1| DNA polymerase i [Paenibacillus terrae HPL-003]
Length = 884
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
++G E +YG LKP Q +D+ L+GD +DNIPG+ G+G+ A++L+ ++G
Sbjct: 158 TYGPEQIQERYG-LKPLQIIDLKGLMGDTSDNIPGIPGVGEKTALKLLHQYG 208
>gi|374314445|ref|YP_005060874.1| 5'-3' exonuclease [Serratia symbiotica str. 'Cinara cedri']
gi|363988671|gb|AEW44862.1| 5'-3' exonuclease domain of DNA polymerase I [Serratia symbiotica
str. 'Cinara cedri']
Length = 922
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG ++ +KYG + P +D+++LVGD +DNIPGV GIG A L+ FG L
Sbjct: 160 FGPQEVFKKYG-VPPKLIIDLLALVGDTSDNIPGVPGIGKKTAQTLLMTFGGL 211
>gi|431497705|ref|ZP_19514859.1| DNA polymerase I [Enterococcus faecium E1634]
gi|430588640|gb|ELB26832.1| DNA polymerase I [Enterococcus faecium E1634]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|282880586|ref|ZP_06289293.1| DNA-directed DNA polymerase [Prevotella timonensis CRIS 5C-B1]
gi|281305689|gb|EFA97742.1| DNA-directed DNA polymerase [Prevotella timonensis CRIS 5C-B1]
Length = 920
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ KY P Q +D+++L+GD ADN PG G+G+ A++LI +FG +
Sbjct: 158 TLGEKEICAKYSIDSPLQVIDILALMGDTADNFPGCPGVGEKTAIKLINQFGSI 211
>gi|20807355|ref|NP_622526.1| DNA polymerase I [Thermoanaerobacter tengcongensis MB4]
gi|20515872|gb|AAM24130.1| DNA polymerase I - 3'-5' exonuclease and polymerase domains
[Thermoanaerobacter tengcongensis MB4]
Length = 871
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 6 MEDFARK----YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVE 61
ME+F K E+ P QFVD+ L+GDK+DNIPG+ IG+ A++L+ +FG + +E
Sbjct: 156 MEEFDEKAVLERYEITPQQFVDLKGLMGDKSDNIPGIPNIGEKTAIKLLKEFGSVENLLE 215
Query: 62 CFSEM 66
S++
Sbjct: 216 NISKL 220
>gi|431071631|ref|ZP_19494602.1| DNA polymerase I [Enterococcus faecium E1604]
gi|430567264|gb|ELB06350.1| DNA polymerase I [Enterococcus faecium E1604]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|427396176|ref|ZP_18888935.1| DNA polymerase I [Enterococcus durans FB129-CNAB-4]
gi|430860200|ref|ZP_19477804.1| DNA polymerase I [Enterococcus faecium E1573]
gi|430949845|ref|ZP_19486068.1| DNA polymerase I [Enterococcus faecium E1576]
gi|431006650|ref|ZP_19489115.1| DNA polymerase I [Enterococcus faecium E1578]
gi|431253115|ref|ZP_19504441.1| DNA polymerase I [Enterococcus faecium E1623]
gi|425722846|gb|EKU85737.1| DNA polymerase I [Enterococcus durans FB129-CNAB-4]
gi|430552637|gb|ELA92365.1| DNA polymerase I [Enterococcus faecium E1573]
gi|430557699|gb|ELA97145.1| DNA polymerase I [Enterococcus faecium E1576]
gi|430561186|gb|ELB00463.1| DNA polymerase I [Enterococcus faecium E1578]
gi|430578203|gb|ELB16773.1| DNA polymerase I [Enterococcus faecium E1623]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|421858165|ref|ZP_16290441.1| DNA polymerase I [Paenibacillus popilliae ATCC 14706]
gi|410832267|dbj|GAC40878.1| DNA polymerase I [Paenibacillus popilliae ATCC 14706]
Length = 889
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECF 63
+ + + KYG LKP Q +D+ L+GD +DNIPGV GIG+ A++L+ ++ + +E
Sbjct: 160 YTLAEIEEKYG-LKPEQIIDLKGLMGDTSDNIPGVPGIGEKTALKLLHQYSSVESVLEHV 218
Query: 64 SEM 66
SE+
Sbjct: 219 SEL 221
>gi|425057932|ref|ZP_18461329.1| DNA-directed DNA polymerase [Enterococcus faecium 504]
gi|403039507|gb|EJY50651.1| DNA-directed DNA polymerase [Enterococcus faecium 504]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|423386080|ref|ZP_17363336.1| DNA polymerase I [Bacillus cereus BAG1X1-2]
gi|423527564|ref|ZP_17504009.1| DNA polymerase I [Bacillus cereus HuB1-1]
gi|401634731|gb|EJS52494.1| DNA polymerase I [Bacillus cereus BAG1X1-2]
gi|402452933|gb|EJV84743.1| DNA polymerase I [Bacillus cereus HuB1-1]
Length = 877
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKESLFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|389868745|ref|YP_006376168.1| DNA-directed DNA polymerase I [Enterococcus faecium DO]
gi|388533994|gb|AFK59186.1| DNA-directed DNA polymerase I [Enterococcus faecium DO]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|293556212|ref|ZP_06674802.1| DNA polymerase I [Enterococcus faecium E1039]
gi|294615648|ref|ZP_06695503.1| DNA polymerase type I [Enterococcus faecium E1636]
gi|430825489|ref|ZP_19443693.1| DNA polymerase I [Enterococcus faecium E0164]
gi|430827618|ref|ZP_19445751.1| DNA polymerase I [Enterococcus faecium E0269]
gi|430835804|ref|ZP_19453791.1| DNA polymerase I [Enterococcus faecium E0680]
gi|430838095|ref|ZP_19456045.1| DNA polymerase I [Enterococcus faecium E0688]
gi|430849690|ref|ZP_19467463.1| DNA polymerase I [Enterococcus faecium E1185]
gi|430858146|ref|ZP_19475775.1| DNA polymerase I [Enterococcus faecium E1552]
gi|431146141|ref|ZP_19499038.1| DNA polymerase I [Enterococcus faecium E1620]
gi|431746177|ref|ZP_19535011.1| DNA polymerase I [Enterococcus faecium E2134]
gi|291591477|gb|EFF23131.1| DNA polymerase type I [Enterococcus faecium E1636]
gi|291601631|gb|EFF31893.1| DNA polymerase I [Enterococcus faecium E1039]
gi|430445954|gb|ELA55653.1| DNA polymerase I [Enterococcus faecium E0164]
gi|430484478|gb|ELA61493.1| DNA polymerase I [Enterococcus faecium E0269]
gi|430489166|gb|ELA65799.1| DNA polymerase I [Enterococcus faecium E0680]
gi|430492375|gb|ELA68789.1| DNA polymerase I [Enterococcus faecium E0688]
gi|430537441|gb|ELA77784.1| DNA polymerase I [Enterococcus faecium E1185]
gi|430546098|gb|ELA86064.1| DNA polymerase I [Enterococcus faecium E1552]
gi|430575681|gb|ELB14378.1| DNA polymerase I [Enterococcus faecium E1620]
gi|430608946|gb|ELB46152.1| DNA polymerase I [Enterococcus faecium E2134]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|430851663|ref|ZP_19469398.1| DNA polymerase I [Enterococcus faecium E1258]
gi|430542245|gb|ELA82353.1| DNA polymerase I [Enterococcus faecium E1258]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|403745853|ref|ZP_10954601.1| DNA polymerase I [Alicyclobacillus hesperidum URH17-3-68]
gi|403121197|gb|EJY55521.1| DNA polymerase I [Alicyclobacillus hesperidum URH17-3-68]
Length = 882
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A +YG L+P Q VD+ L+GD +DNIPGV G+G+ A++L+T F
Sbjct: 168 AARYG-LRPMQIVDLKGLMGDTSDNIPGVPGVGEKTAIKLLTSF 210
>gi|347758973|ref|YP_004866535.1| DNA polymerase I family protein [Micavibrio aeruginosavorus ARL-13]
gi|347591491|gb|AEP10533.1| DNA polymerase I family protein [Micavibrio aeruginosavorus ARL-13]
Length = 942
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ED K+G + P + VDV SL GD +DN+PGV GIG A QLI ++G L
Sbjct: 168 GPEDAFEKFG-VTPDKVVDVQSLAGDPSDNVPGVPGIGIKTAAQLINEYGSL 218
>gi|257882837|ref|ZP_05662490.1| DNA polymerase A [Enterococcus faecium 1,231,502]
gi|261207884|ref|ZP_05922569.1| DNA polymerase A [Enterococcus faecium TC 6]
gi|289566952|ref|ZP_06447356.1| DNA polymerase I [Enterococcus faecium D344SRF]
gi|293569014|ref|ZP_06680327.1| DNA polymerase I [Enterococcus faecium E1071]
gi|294623286|ref|ZP_06702151.1| DNA polymerase I [Enterococcus faecium U0317]
gi|415897516|ref|ZP_11551091.1| DNA polymerase I [Enterococcus faecium E4453]
gi|416134169|ref|ZP_11598225.1| DNA polymerase I [Enterococcus faecium E4452]
gi|424802660|ref|ZP_18228137.1| DNA-directed DNA polymerase [Enterococcus faecium S447]
gi|424859604|ref|ZP_18283595.1| DNA-directed DNA polymerase [Enterococcus faecium R499]
gi|424950746|ref|ZP_18365895.1| DNA-directed DNA polymerase [Enterococcus faecium R496]
gi|424955612|ref|ZP_18370438.1| DNA-directed DNA polymerase [Enterococcus faecium R446]
gi|424960444|ref|ZP_18374959.1| DNA-directed DNA polymerase [Enterococcus faecium P1986]
gi|424967008|ref|ZP_18380749.1| DNA-directed DNA polymerase [Enterococcus faecium P1140]
gi|424996914|ref|ZP_18408698.1| DNA-directed DNA polymerase [Enterococcus faecium ERV165]
gi|425000768|ref|ZP_18412316.1| DNA-directed DNA polymerase [Enterococcus faecium ERV161]
gi|425005270|ref|ZP_18416528.1| DNA-directed DNA polymerase [Enterococcus faecium ERV102]
gi|425012303|ref|ZP_18423127.1| DNA-directed DNA polymerase [Enterococcus faecium E422]
gi|425016752|ref|ZP_18427297.1| DNA-directed DNA polymerase [Enterococcus faecium C621]
gi|425032068|ref|ZP_18437156.1| DNA-directed DNA polymerase [Enterococcus faecium 515]
gi|425041835|ref|ZP_18446215.1| DNA-directed DNA polymerase [Enterococcus faecium 511]
gi|430822524|ref|ZP_19441102.1| DNA polymerase I [Enterococcus faecium E0120]
gi|430854810|ref|ZP_19472522.1| DNA polymerase I [Enterococcus faecium E1392]
gi|430865084|ref|ZP_19480842.1| DNA polymerase I [Enterococcus faecium E1574]
gi|431229779|ref|ZP_19501982.1| DNA polymerase I [Enterococcus faecium E1622]
gi|431370132|ref|ZP_19509831.1| DNA polymerase I [Enterococcus faecium E1627]
gi|431743133|ref|ZP_19532014.1| DNA polymerase I [Enterococcus faecium E2071]
gi|431767188|ref|ZP_19555643.1| DNA polymerase I [Enterococcus faecium E1321]
gi|431772268|ref|ZP_19560610.1| DNA polymerase I [Enterococcus faecium E2369]
gi|431775792|ref|ZP_19564062.1| DNA polymerase I [Enterococcus faecium E2560]
gi|431785718|ref|ZP_19573741.1| DNA polymerase I [Enterococcus faecium E6045]
gi|447912576|ref|YP_007393988.1| DNA polymerase I [Enterococcus faecium NRRL B-2354]
gi|257818495|gb|EEV45823.1| DNA polymerase A [Enterococcus faecium 1,231,502]
gi|260078267|gb|EEW65973.1| DNA polymerase A [Enterococcus faecium TC 6]
gi|289161251|gb|EFD09147.1| DNA polymerase I [Enterococcus faecium D344SRF]
gi|291588447|gb|EFF20282.1| DNA polymerase I [Enterococcus faecium E1071]
gi|291597314|gb|EFF28500.1| DNA polymerase I [Enterococcus faecium U0317]
gi|364090535|gb|EHM33107.1| DNA polymerase I [Enterococcus faecium E4453]
gi|364092681|gb|EHM35029.1| DNA polymerase I [Enterococcus faecium E4452]
gi|402919379|gb|EJX39985.1| DNA-directed DNA polymerase [Enterococcus faecium S447]
gi|402926267|gb|EJX46318.1| DNA-directed DNA polymerase [Enterococcus faecium R499]
gi|402932544|gb|EJX52043.1| DNA-directed DNA polymerase [Enterococcus faecium R496]
gi|402947722|gb|EJX65914.1| DNA-directed DNA polymerase [Enterococcus faecium P1986]
gi|402948261|gb|EJX66414.1| DNA-directed DNA polymerase [Enterococcus faecium R446]
gi|402955275|gb|EJX72817.1| DNA-directed DNA polymerase [Enterococcus faecium P1140]
gi|402986673|gb|EJY01785.1| DNA-directed DNA polymerase [Enterococcus faecium ERV102]
gi|402987448|gb|EJY02510.1| DNA-directed DNA polymerase [Enterococcus faecium ERV165]
gi|402988506|gb|EJY03509.1| DNA-directed DNA polymerase [Enterococcus faecium ERV161]
gi|402993760|gb|EJY08348.1| DNA-directed DNA polymerase [Enterococcus faecium E422]
gi|403006192|gb|EJY19856.1| DNA-directed DNA polymerase [Enterococcus faecium C621]
gi|403014048|gb|EJY27068.1| DNA-directed DNA polymerase [Enterococcus faecium 515]
gi|403025334|gb|EJY37420.1| DNA-directed DNA polymerase [Enterococcus faecium 511]
gi|430443101|gb|ELA53098.1| DNA polymerase I [Enterococcus faecium E0120]
gi|430547689|gb|ELA87605.1| DNA polymerase I [Enterococcus faecium E1392]
gi|430553162|gb|ELA92863.1| DNA polymerase I [Enterococcus faecium E1574]
gi|430573765|gb|ELB12543.1| DNA polymerase I [Enterococcus faecium E1622]
gi|430583879|gb|ELB22237.1| DNA polymerase I [Enterococcus faecium E1627]
gi|430607497|gb|ELB44817.1| DNA polymerase I [Enterococcus faecium E2071]
gi|430631196|gb|ELB67519.1| DNA polymerase I [Enterococcus faecium E1321]
gi|430638132|gb|ELB74109.1| DNA polymerase I [Enterococcus faecium E2369]
gi|430642440|gb|ELB78218.1| DNA polymerase I [Enterococcus faecium E2560]
gi|430646877|gb|ELB82338.1| DNA polymerase I [Enterococcus faecium E6045]
gi|445188285|gb|AGE29927.1| DNA polymerase I [Enterococcus faecium NRRL B-2354]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|91762671|ref|ZP_01264636.1| DNA polymerase I [Candidatus Pelagibacter ubique HTCC1002]
gi|91718473|gb|EAS85123.1| DNA polymerase I [Candidatus Pelagibacter ubique HTCC1002]
Length = 924
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
ED K+G + P + +DV SL GD +DN+PGV GIG A +LI K+G L
Sbjct: 172 EDIVTKFG-VGPEKVIDVQSLAGDSSDNVPGVPGIGVKTAAELINKYGTL 220
>gi|17978836|gb|AAL47553.1| DNA polymerase [Caldanaerobacter subterraneus subsp. yonseiensis]
Length = 871
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 6 MEDFARK----YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVE 61
ME+F K E+ P QFVD+ L+GDK+DNIPG+ IG+ A++L+ +FG + +E
Sbjct: 156 MEEFDEKAVLERYEITPQQFVDLKGLMGDKSDNIPGIPNIGEKTAIKLLKEFGSVENLLE 215
Query: 62 CFSEM 66
S++
Sbjct: 216 NISKL 220
>gi|69246664|ref|ZP_00604054.1| DNA polymerase A [Enterococcus faecium DO]
gi|68195138|gb|EAN09596.1| DNA polymerase A [Enterococcus faecium DO]
Length = 868
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 149 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 208
Query: 61 ECFSEM 66
E EM
Sbjct: 209 EHIDEM 214
>gi|430844042|ref|ZP_19461940.1| DNA polymerase I [Enterococcus faecium E1050]
gi|430496632|gb|ELA72691.1| DNA polymerase I [Enterococcus faecium E1050]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|430833099|ref|ZP_19451112.1| DNA polymerase I [Enterococcus faecium E0679]
gi|430486554|gb|ELA63390.1| DNA polymerase I [Enterococcus faecium E0679]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|71082906|ref|YP_265625.1| DNA polymerase I [Candidatus Pelagibacter ubique HTCC1062]
gi|71062019|gb|AAZ21022.1| DNA polymerase I [Candidatus Pelagibacter ubique HTCC1062]
Length = 924
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
ED K+G + P + +DV SL GD +DN+PGV GIG A +LI K+G L
Sbjct: 172 EDIVTKFG-VGPEKVIDVQSLAGDSSDNVPGVPGIGVKTAAELINKYGTL 220
>gi|226225416|ref|YP_002759522.1| DNA polymerase I [Gemmatimonas aurantiaca T-27]
gi|226088607|dbj|BAH37052.1| DNA polymerase I [Gemmatimonas aurantiaca T-27]
Length = 984
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ + + G + P + +D +++VGD +DN+PGV+GIG+ A++LIT++G L
Sbjct: 176 GVENGSDRLG-VPPERVIDYLAIVGDTSDNVPGVKGIGEKGAIELITQYGPL 226
>gi|212639099|ref|YP_002315619.1| 5'-3' exonuclease [Anoxybacillus flavithermus WK1]
gi|212560579|gb|ACJ33634.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Anoxybacillus flavithermus WK1]
Length = 277
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++ ++ F + G ++P Q +DV +L+GD +DN PGV GIG+ +AV+LI ++G +
Sbjct: 161 AYTLDRFIEEKG-IQPQQLIDVKALMGDPSDNYPGVRGIGEKQAVKLIQQYGSI 213
>gi|431294039|ref|ZP_19506913.1| DNA polymerase I [Enterococcus faecium E1626]
gi|430581632|gb|ELB20071.1| DNA polymerase I [Enterococcus faecium E1626]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|406580958|ref|ZP_11056143.1| DNA polymerase I [Enterococcus sp. GMD4E]
gi|406583127|ref|ZP_11058218.1| DNA polymerase I [Enterococcus sp. GMD3E]
gi|406585545|ref|ZP_11060532.1| DNA polymerase I [Enterococcus sp. GMD2E]
gi|406590632|ref|ZP_11064992.1| DNA polymerase I [Enterococcus sp. GMD1E]
gi|410937197|ref|ZP_11369058.1| DNA polymerase I [Enterococcus sp. GMD5E]
gi|404453334|gb|EKA00399.1| DNA polymerase I [Enterococcus sp. GMD4E]
gi|404457102|gb|EKA03676.1| DNA polymerase I [Enterococcus sp. GMD3E]
gi|404462560|gb|EKA08292.1| DNA polymerase I [Enterococcus sp. GMD2E]
gi|404469060|gb|EKA13898.1| DNA polymerase I [Enterococcus sp. GMD1E]
gi|410734308|gb|EKQ76228.1| DNA polymerase I [Enterococcus sp. GMD5E]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|294617839|ref|ZP_06697450.1| DNA polymerase type I [Enterococcus faecium E1679]
gi|431661111|ref|ZP_19523923.1| DNA polymerase I [Enterococcus faecium E1904]
gi|291595912|gb|EFF27194.1| DNA polymerase type I [Enterococcus faecium E1679]
gi|430600231|gb|ELB37885.1| DNA polymerase I [Enterococcus faecium E1904]
Length = 881
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|431764107|ref|ZP_19552650.1| DNA polymerase I [Enterococcus faecium E4215]
gi|430631292|gb|ELB67614.1| DNA polymerase I [Enterococcus faecium E4215]
Length = 881
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|430819965|ref|ZP_19438609.1| DNA polymerase I [Enterococcus faecium E0045]
gi|430871241|ref|ZP_19483664.1| DNA polymerase I [Enterococcus faecium E1575]
gi|430440168|gb|ELA50445.1| DNA polymerase I [Enterococcus faecium E0045]
gi|430558198|gb|ELA97625.1| DNA polymerase I [Enterococcus faecium E1575]
Length = 881
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|424765986|ref|ZP_18193348.1| DNA-directed DNA polymerase [Enterococcus faecium TX1337RF]
gi|430841379|ref|ZP_19459298.1| DNA polymerase I [Enterococcus faecium E1007]
gi|431585969|ref|ZP_19520484.1| DNA polymerase I [Enterococcus faecium E1861]
gi|402412993|gb|EJV45344.1| DNA-directed DNA polymerase [Enterococcus faecium TX1337RF]
gi|430494155|gb|ELA70405.1| DNA polymerase I [Enterococcus faecium E1007]
gi|430593147|gb|ELB31133.1| DNA polymerase I [Enterococcus faecium E1861]
Length = 881
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|323343700|ref|ZP_08083927.1| DNA-directed DNA polymerase I [Prevotella oralis ATCC 33269]
gi|323095519|gb|EFZ38093.1| DNA-directed DNA polymerase I [Prevotella oralis ATCC 33269]
Length = 920
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ KYG P Q +D+++L+GD ADN PG G+G+ A +LI+++G +
Sbjct: 159 LGEKEVEAKYGITSPLQVIDLLALMGDSADNFPGCPGVGEKTAAKLISEYGSI 211
>gi|314948920|ref|ZP_07852289.1| DNA-directed DNA polymerase [Enterococcus faecium TX0082]
gi|313644710|gb|EFS09290.1| DNA-directed DNA polymerase [Enterococcus faecium TX0082]
Length = 881
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|257878419|ref|ZP_05658072.1| DNA polymerase A [Enterococcus faecium 1,230,933]
gi|257889382|ref|ZP_05669035.1| DNA polymerase A [Enterococcus faecium 1,231,410]
gi|257894395|ref|ZP_05674048.1| DNA polymerase A [Enterococcus faecium 1,231,408]
gi|260560008|ref|ZP_05832186.1| DNA polymerase A [Enterococcus faecium C68]
gi|293559954|ref|ZP_06676462.1| DNA polymerase I [Enterococcus faecium E1162]
gi|314937782|ref|ZP_07845099.1| DNA-directed DNA polymerase [Enterococcus faecium TX0133a04]
gi|314941672|ref|ZP_07848552.1| DNA-directed DNA polymerase [Enterococcus faecium TX0133C]
gi|314950962|ref|ZP_07854029.1| DNA-directed DNA polymerase [Enterococcus faecium TX0133A]
gi|314992964|ref|ZP_07858360.1| DNA-directed DNA polymerase [Enterococcus faecium TX0133B]
gi|314996411|ref|ZP_07861454.1| DNA-directed DNA polymerase [Enterococcus faecium TX0133a01]
gi|383328868|ref|YP_005354752.1| DNA polymerase I [Enterococcus faecium Aus0004]
gi|424792399|ref|ZP_18218636.1| DNA-directed DNA polymerase [Enterococcus faecium V689]
gi|424834914|ref|ZP_18259599.1| DNA-directed DNA polymerase [Enterococcus faecium R501]
gi|424869096|ref|ZP_18292819.1| DNA-directed DNA polymerase [Enterococcus faecium R497]
gi|424953549|ref|ZP_18368501.1| DNA-directed DNA polymerase [Enterococcus faecium R494]
gi|424963163|ref|ZP_18377427.1| DNA-directed DNA polymerase [Enterococcus faecium P1190]
gi|424970235|ref|ZP_18383762.1| DNA-directed DNA polymerase [Enterococcus faecium P1139]
gi|424973188|ref|ZP_18386477.1| DNA-directed DNA polymerase [Enterococcus faecium P1137]
gi|424977744|ref|ZP_18390730.1| DNA-directed DNA polymerase [Enterococcus faecium P1123]
gi|424980149|ref|ZP_18392963.1| DNA-directed DNA polymerase [Enterococcus faecium ERV99]
gi|424985184|ref|ZP_18397676.1| DNA-directed DNA polymerase [Enterococcus faecium ERV69]
gi|424987169|ref|ZP_18399558.1| DNA-directed DNA polymerase [Enterococcus faecium ERV38]
gi|424990264|ref|ZP_18402481.1| DNA-directed DNA polymerase [Enterococcus faecium ERV26]
gi|424995068|ref|ZP_18406966.1| DNA-directed DNA polymerase [Enterococcus faecium ERV168]
gi|425006563|ref|ZP_18417735.1| DNA-directed DNA polymerase [Enterococcus faecium ERV1]
gi|425015070|ref|ZP_18425711.1| DNA-directed DNA polymerase [Enterococcus faecium E417]
gi|425019802|ref|ZP_18430142.1| DNA-directed DNA polymerase [Enterococcus faecium C497]
gi|425027912|ref|ZP_18435164.1| DNA-directed DNA polymerase [Enterococcus faecium C1904]
gi|425034752|ref|ZP_18439619.1| DNA-directed DNA polymerase [Enterococcus faecium 514]
gi|425038455|ref|ZP_18443071.1| DNA-directed DNA polymerase [Enterococcus faecium 513]
gi|425045985|ref|ZP_18450041.1| DNA-directed DNA polymerase [Enterococcus faecium 510]
gi|425050292|ref|ZP_18454054.1| DNA-directed DNA polymerase [Enterococcus faecium 509]
gi|425051333|ref|ZP_18455002.1| DNA-directed DNA polymerase [Enterococcus faecium 506]
gi|425060976|ref|ZP_18464242.1| DNA-directed DNA polymerase [Enterococcus faecium 503]
gi|430830710|ref|ZP_19448766.1| DNA polymerase I [Enterococcus faecium E0333]
gi|430846043|ref|ZP_19463908.1| DNA polymerase I [Enterococcus faecium E1133]
gi|431541897|ref|ZP_19518126.1| DNA polymerase I [Enterococcus faecium E1731]
gi|431750122|ref|ZP_19538849.1| DNA polymerase I [Enterococcus faecium E2297]
gi|431754813|ref|ZP_19543473.1| DNA polymerase I [Enterococcus faecium E2883]
gi|431770810|ref|ZP_19559207.1| DNA polymerase I [Enterococcus faecium E1644]
gi|431778779|ref|ZP_19566985.1| DNA polymerase I [Enterococcus faecium E4389]
gi|431781905|ref|ZP_19570045.1| DNA polymerase I [Enterococcus faecium E6012]
gi|257812647|gb|EEV41405.1| DNA polymerase A [Enterococcus faecium 1,230,933]
gi|257825742|gb|EEV52368.1| DNA polymerase A [Enterococcus faecium 1,231,410]
gi|257830774|gb|EEV57381.1| DNA polymerase A [Enterococcus faecium 1,231,408]
gi|260073843|gb|EEW62167.1| DNA polymerase A [Enterococcus faecium C68]
gi|291606042|gb|EFF35468.1| DNA polymerase I [Enterococcus faecium E1162]
gi|313589393|gb|EFR68238.1| DNA-directed DNA polymerase [Enterococcus faecium TX0133a01]
gi|313592487|gb|EFR71332.1| DNA-directed DNA polymerase [Enterococcus faecium TX0133B]
gi|313596817|gb|EFR75662.1| DNA-directed DNA polymerase [Enterococcus faecium TX0133A]
gi|313599563|gb|EFR78406.1| DNA-directed DNA polymerase [Enterococcus faecium TX0133C]
gi|313642813|gb|EFS07393.1| DNA-directed DNA polymerase [Enterococcus faecium TX0133a04]
gi|378938562|gb|AFC63634.1| DNA polymerase I [Enterococcus faecium Aus0004]
gi|402917678|gb|EJX38432.1| DNA-directed DNA polymerase [Enterococcus faecium V689]
gi|402921849|gb|EJX42268.1| DNA-directed DNA polymerase [Enterococcus faecium R501]
gi|402936151|gb|EJX55349.1| DNA-directed DNA polymerase [Enterococcus faecium R497]
gi|402938754|gb|EJX57735.1| DNA-directed DNA polymerase [Enterococcus faecium R494]
gi|402950165|gb|EJX68177.1| DNA-directed DNA polymerase [Enterococcus faecium P1190]
gi|402959227|gb|EJX76501.1| DNA-directed DNA polymerase [Enterococcus faecium P1137]
gi|402962326|gb|EJX79279.1| DNA-directed DNA polymerase [Enterococcus faecium P1139]
gi|402964613|gb|EJX81383.1| DNA-directed DNA polymerase [Enterococcus faecium P1123]
gi|402966602|gb|EJX83222.1| DNA-directed DNA polymerase [Enterococcus faecium ERV69]
gi|402967250|gb|EJX83822.1| DNA-directed DNA polymerase [Enterococcus faecium ERV99]
gi|402974989|gb|EJX90981.1| DNA-directed DNA polymerase [Enterococcus faecium ERV38]
gi|402978281|gb|EJX94036.1| DNA-directed DNA polymerase [Enterococcus faecium ERV168]
gi|402979840|gb|EJX95487.1| DNA-directed DNA polymerase [Enterococcus faecium ERV26]
gi|402996847|gb|EJY11208.1| DNA-directed DNA polymerase [Enterococcus faecium E417]
gi|402997095|gb|EJY11445.1| DNA-directed DNA polymerase [Enterococcus faecium ERV1]
gi|403004984|gb|EJY18735.1| DNA-directed DNA polymerase [Enterococcus faecium C1904]
gi|403010747|gb|EJY24098.1| DNA-directed DNA polymerase [Enterococcus faecium C497]
gi|403019435|gb|EJY32038.1| DNA-directed DNA polymerase [Enterococcus faecium 514]
gi|403019560|gb|EJY32156.1| DNA-directed DNA polymerase [Enterococcus faecium 513]
gi|403024238|gb|EJY36412.1| DNA-directed DNA polymerase [Enterococcus faecium 509]
gi|403025870|gb|EJY37914.1| DNA-directed DNA polymerase [Enterococcus faecium 510]
gi|403037855|gb|EJY49106.1| DNA-directed DNA polymerase [Enterococcus faecium 506]
gi|403042084|gb|EJY53059.1| DNA-directed DNA polymerase [Enterococcus faecium 503]
gi|430482299|gb|ELA59417.1| DNA polymerase I [Enterococcus faecium E0333]
gi|430539863|gb|ELA80102.1| DNA polymerase I [Enterococcus faecium E1133]
gi|430592944|gb|ELB30931.1| DNA polymerase I [Enterococcus faecium E1731]
gi|430610595|gb|ELB47739.1| DNA polymerase I [Enterococcus faecium E2297]
gi|430618641|gb|ELB55482.1| DNA polymerase I [Enterococcus faecium E2883]
gi|430634701|gb|ELB70815.1| DNA polymerase I [Enterococcus faecium E1644]
gi|430643440|gb|ELB79179.1| DNA polymerase I [Enterococcus faecium E4389]
gi|430648306|gb|ELB83713.1| DNA polymerase I [Enterococcus faecium E6012]
Length = 881
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLTPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|217076341|ref|YP_002334057.1| DNA polymerase I [Thermosipho africanus TCF52B]
gi|217036194|gb|ACJ74716.1| DNA polymerase I [Thermosipho africanus TCF52B]
Length = 892
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P QF D +SLVGD+ DNIPGV+GIG AV L+ K+ L
Sbjct: 172 KYG-IYPEQFKDYLSLVGDQIDNIPGVKGIGKKTAVSLLKKYNSL 215
>gi|429740271|ref|ZP_19273966.1| DNA-directed DNA polymerase [Prevotella saccharolytica F0055]
gi|429153674|gb|EKX96450.1| DNA-directed DNA polymerase [Prevotella saccharolytica F0055]
Length = 920
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ G ++ KY P Q +D+++L+GD ADN PG G+G+ A++LI +FG
Sbjct: 158 TLGEKEINAKYNITSPLQVIDLLALMGDSADNFPGCPGVGEKTAIKLINEFG 209
>gi|407978365|ref|ZP_11159197.1| DNA polymerase I [Bacillus sp. HYC-10]
gi|407415133|gb|EKF36746.1| DNA polymerase I [Bacillus sp. HYC-10]
Length = 879
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q +D+ L+GD +DNIPGV G+G+ A++L+ +FG +
Sbjct: 170 KYG-LRPDQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQFGTV 213
>gi|70726235|ref|YP_253149.1| DNA polymerase I [Staphylococcus haemolyticus JCSC1435]
gi|68446959|dbj|BAE04543.1| DNA polymerase I [Staphylococcus haemolyticus JCSC1435]
Length = 876
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYDGLNPNQIIDMKGLMGDASDNIPGVAGVGEKTAIKLLKQF 208
>gi|373459016|ref|ZP_09550783.1| DNA polymerase I [Caldithrix abyssi DSM 13497]
gi|371720680|gb|EHO42451.1| DNA polymerase I [Caldithrix abyssi DSM 13497]
Length = 908
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ KYG ++P Q +D ++L+GDK+DNIPGV +G+V A +L+ +FG +
Sbjct: 164 QKIVEKYG-VQPEQIIDWLALMGDKSDNIPGVPKVGEVTAAKLLQQFGSI 212
>gi|357030774|ref|ZP_09092718.1| DNA polymerase I [Gluconobacter morbifer G707]
gi|356415468|gb|EHH69111.1| DNA polymerase I [Gluconobacter morbifer G707]
Length = 924
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G +KP Q VDV +L+GD DN+PGV GIG A QLI ++G L
Sbjct: 167 KFG-VKPEQVVDVQALMGDSTDNVPGVPGIGPKGASQLINEYGTL 210
>gi|169334513|ref|ZP_02861706.1| hypothetical protein ANASTE_00916 [Anaerofustis stercorihominis DSM
17244]
gi|169259230|gb|EDS73196.1| DNA-directed DNA polymerase [Anaerofustis stercorihominis DSM
17244]
Length = 888
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
ED+ ++ L P Q +D+ +L+GDK+DNIPGV+G+G+ A+ L+ K+ L
Sbjct: 162 EDYLKEKYNLTPKQMIDLKALMGDKSDNIPGVKGVGEKTALNLLEKYSDL 211
>gi|404329861|ref|ZP_10970309.1| 5'-3' exonuclease [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 305
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
S+ FA ++G + P+QF+DV +L+GD +D PGV GIG+ A +LI +FG +
Sbjct: 164 SYTDRSFAERFG-VTPAQFIDVKALMGDASDGYPGVRGIGEKTAFKLIHEFGSM 216
>gi|325299488|ref|YP_004259405.1| DNA polymerase I [Bacteroides salanitronis DSM 18170]
gi|324319041|gb|ADY36932.1| DNA polymerase I [Bacteroides salanitronis DSM 18170]
Length = 923
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD ADNIPG G+G+ A +LI +FG +
Sbjct: 162 GVEEVKAKFDIQSPAQVIDMLGLMGDTADNIPGCPGVGEKTAQKLIAQFGSI 213
>gi|304316561|ref|YP_003851706.1| DNA polymerase I [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778063|gb|ADL68622.1| DNA polymerase I [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 867
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
E+ P QF+D+ L+GDK+DNIPGV IG+ A++LI +FG
Sbjct: 169 EVTPRQFIDLKGLMGDKSDNIPGVPNIGEKTAIKLIKEFG 208
>gi|21674485|ref|NP_662550.1| DNA polymerase I [Chlorobium tepidum TLS]
gi|21647674|gb|AAM72892.1| DNA polymerase I [Chlorobium tepidum TLS]
Length = 950
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G + A ++G P QF+D+++L GD +DNIPG +GIG A L+ K+G L
Sbjct: 193 LGSREVAEQFGA-PPEQFIDLLTLTGDTSDNIPGAKGIGPKTASSLLKKYGSL 244
>gi|417801121|ref|ZP_12448221.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Staphylococcus aureus subsp. aureus 21318]
gi|334277308|gb|EGL95540.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Staphylococcus aureus subsp. aureus 21318]
Length = 378
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|402308918|ref|ZP_10827920.1| DNA-directed DNA polymerase [Prevotella sp. MSX73]
gi|400374497|gb|EJP27415.1| DNA-directed DNA polymerase [Prevotella sp. MSX73]
Length = 920
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ KYG P Q VD+++L+GD ADN PG G+G+ A +LI +FG
Sbjct: 160 GPKEVQAKYGIASPLQVVDLLALMGDSADNFPGCPGVGEKTAAKLIGEFG 209
>gi|323141560|ref|ZP_08076445.1| DNA-directed DNA polymerase [Phascolarctobacterium succinatutens
YIT 12067]
gi|322413972|gb|EFY04806.1| DNA-directed DNA polymerase [Phascolarctobacterium succinatutens
YIT 12067]
Length = 878
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECF 63
F +FA Y L+P Q +++ L+GD +DNIPGV G+G A++LI ++G NVE
Sbjct: 172 FDEAEFAANYEGLQPKQLIELKGLMGDTSDNIPGVPGVGPKTAMKLIKEYG----NVETV 227
Query: 64 SE 65
E
Sbjct: 228 LE 229
>gi|427714528|ref|YP_007063152.1| DNA polymerase I family protein [Synechococcus sp. PCC 6312]
gi|427378657|gb|AFY62609.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Synechococcus sp. PCC 6312]
Length = 953
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG E+ K G + P Q VD +L GD +DNIPGV GIG AVQLI +F L
Sbjct: 174 FGPEEVKSKLG-VWPRQVVDYKALCGDTSDNIPGVRGIGPKTAVQLIEQFETL 225
>gi|340622493|ref|YP_004740945.1| DNA polymerase I [Capnocytophaga canimorsus Cc5]
gi|339902759|gb|AEK23838.1| DNA polymerase I [Capnocytophaga canimorsus Cc5]
Length = 918
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+ + K+G P Q +D + ++GD ADNIPG+ G+G+ A +L+ FG L
Sbjct: 163 WGVPEVQEKFGVQTPEQVIDFLGMMGDTADNIPGLPGVGEKTAKKLLADFGSL 215
>gi|377831719|ref|ZP_09814689.1| DNA-directed DNA polymerase I [Lactobacillus mucosae LM1]
gi|377554513|gb|EHT16222.1| DNA-directed DNA polymerase I [Lactobacillus mucosae LM1]
Length = 887
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 9 FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F K+G + P+QF+D+ +L+GD +DN PGV GIG+ A +LI ++G L
Sbjct: 169 FQEKFG-VTPTQFIDMKALMGDSSDNYPGVTGIGEKTAQKLIQEYGSL 215
>gi|326403697|ref|YP_004283779.1| DNA polymerase I [Acidiphilium multivorum AIU301]
gi|325050559|dbj|BAJ80897.1| DNA polymerase I [Acidiphilium multivorum AIU301]
Length = 892
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ KYG + P Q VD +L+GD DN+PGV GIG A QLI +FG L
Sbjct: 134 GPDEVVAKYG-VTPEQMVDAQALMGDSVDNVPGVPGIGPKGAAQLIAEFGDL 184
>gi|383786118|ref|YP_005470687.1| DNA polymerase I [Fervidobacterium pennivorans DSM 9078]
gi|383108965|gb|AFG34568.1| DNA polymerase I [Fervidobacterium pennivorans DSM 9078]
Length = 897
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + D +YG + P Q VD ++LVGD +DNIPGV GIG+ AV+++ FG
Sbjct: 169 YTVRDVYERYG-VYPHQIVDYLALVGDASDNIPGVPGIGEKTAVKILQDFG 218
>gi|338983099|ref|ZP_08632330.1| DNA polymerase I [Acidiphilium sp. PM]
gi|338207974|gb|EGO95880.1| DNA polymerase I [Acidiphilium sp. PM]
Length = 915
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ KYG + P Q VD +L+GD DN+PGV GIG A QLI +FG L
Sbjct: 157 GPDEVVAKYG-VTPEQMVDAQALMGDSVDNVPGVPGIGPKGAAQLIAEFGDL 207
>gi|189346016|ref|YP_001942545.1| DNA polymerase I [Chlorobium limicola DSM 245]
gi|189340163|gb|ACD89566.1| DNA polymerase I [Chlorobium limicola DSM 245]
Length = 943
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ FG + ++G ++P +F+D+++L GD +DNIPG +GIG A L+ K+G L
Sbjct: 184 LEPFGPAEIMAQFG-VEPERFIDLLTLTGDTSDNIPGAKGIGPKTAAALLLKYGTL 238
>gi|227520123|ref|ZP_03950172.1| possible DNA polymerase I, partial [Enterococcus faecalis TX0104]
gi|227072467|gb|EEI10430.1| possible DNA polymerase I [Enterococcus faecalis TX0104]
Length = 428
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 ENIDEM 227
>gi|148260504|ref|YP_001234631.1| DNA polymerase I [Acidiphilium cryptum JF-5]
gi|146402185|gb|ABQ30712.1| DNA polymerase I [Acidiphilium cryptum JF-5]
Length = 915
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ KYG + P Q VD +L+GD DN+PGV GIG A QLI +FG L
Sbjct: 157 GPDEVVAKYG-VTPEQMVDAQALMGDSVDNVPGVPGIGPKGAAQLIAEFGDL 207
>gi|354603286|ref|ZP_09021285.1| hypothetical protein HMPREF9450_00200 [Alistipes indistinctus YIT
12060]
gi|353349163|gb|EHB93429.1| hypothetical protein HMPREF9450_00200 [Alistipes indistinctus YIT
12060]
Length = 1094
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E YG P + +D+++L GD +DNIPGV GIG+ A++L+ +FG +
Sbjct: 208 GCEQIREHYGIDDPCRVIDILALWGDASDNIPGVPGIGEKSAIKLVCEFGTV 259
>gi|229163579|ref|ZP_04291528.1| DNA polymerase I [Bacillus cereus R309803]
gi|228619829|gb|EEK76706.1| DNA polymerase I [Bacillus cereus R309803]
Length = 891
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTTEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|418307726|ref|ZP_12919407.1| putative DNA-directed DNA polymerase, partial [Staphylococcus
aureus subsp. aureus 21194]
gi|365243678|gb|EHM84348.1| putative DNA-directed DNA polymerase, partial [Staphylococcus
aureus subsp. aureus 21194]
Length = 615
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|314933844|ref|ZP_07841209.1| DNA polymerase I [Staphylococcus caprae C87]
gi|313653994|gb|EFS17751.1| DNA polymerase I [Staphylococcus caprae C87]
Length = 887
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L+P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 176 AEKYDGLQPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLKQF 219
>gi|451941315|ref|YP_007461952.1| DNA polymerase I [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451900702|gb|AGF75164.1| DNA polymerase I [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 968
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G+ + K+G + P + VD+ +L+GD DN+PG+ GIG A QL+ +FG L ++ S
Sbjct: 167 GISEVIEKWG-VAPEKMVDLQALIGDSTDNVPGIPGIGPKTAAQLLDQFGTLDLLLQRIS 225
Query: 65 EM 66
E+
Sbjct: 226 EV 227
>gi|418637636|ref|ZP_13199953.1| DNA-directed DNA polymerase [Staphylococcus lugdunensis VCU139]
gi|374838467|gb|EHS02010.1| DNA-directed DNA polymerase [Staphylococcus lugdunensis VCU139]
Length = 877
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYNGLLPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|315606907|ref|ZP_07881914.1| DNA-directed DNA polymerase I [Prevotella buccae ATCC 33574]
gi|315251415|gb|EFU31397.1| DNA-directed DNA polymerase I [Prevotella buccae ATCC 33574]
Length = 920
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ KYG P Q VD+++L+GD ADN PG G+G+ A +LI +FG
Sbjct: 160 GPKEVQAKYGIASPLQVVDLLALMGDSADNFPGCPGVGEKTAAKLIGEFG 209
>gi|417897082|ref|ZP_12541025.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21235]
gi|341840348|gb|EGS81868.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21235]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|340618331|ref|YP_004736784.1| DNA polymerase I [Zobellia galactanivorans]
gi|339733128|emb|CAZ96503.1| DNA polymerase I (POL I) [Zobellia galactanivorans]
Length = 943
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+ + +++G +P Q +D + ++GD +DNIPG+ G+GD A + I +FG +
Sbjct: 164 WGIPEIQKRFGVERPEQVIDYLGMMGDASDNIPGLPGVGDKTAKKFIEQFGSM 216
>gi|330813285|ref|YP_004357524.1| DNA polymerase I [Candidatus Pelagibacter sp. IMCC9063]
gi|327486380|gb|AEA80785.1| DNA polymerase I [Candidatus Pelagibacter sp. IMCC9063]
Length = 939
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E+ K+G + P + +DV SL GD +DNIPGV GIG A +LI +FG L
Sbjct: 169 GKEEVKEKFG-VYPDKVIDVQSLAGDSSDNIPGVPGIGIKTAAELINQFGSL 219
>gi|288925939|ref|ZP_06419869.1| DNA polymerase type I [Prevotella buccae D17]
gi|288337363|gb|EFC75719.1| DNA polymerase type I [Prevotella buccae D17]
Length = 920
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ KYG P Q VD+++L+GD ADN PG G+G+ A +LI +FG
Sbjct: 160 GPKEVQAKYGIASPLQVVDLLALMGDSADNFPGCPGVGEKTAAKLIGEFG 209
>gi|326204649|ref|ZP_08194505.1| DNA polymerase I [Clostridium papyrosolvens DSM 2782]
gi|325985216|gb|EGD46056.1| DNA polymerase I [Clostridium papyrosolvens DSM 2782]
Length = 896
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KYG + P Q +DV L+GD +DNIPGV G+G+ A+ LI KF L
Sbjct: 167 YDYEKVVEKYG-VTPGQLIDVKGLMGDTSDNIPGVPGVGEKTALNLIQKFNSL 218
>gi|384550506|ref|YP_005739758.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302333355|gb|ADL23548.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|283770754|ref|ZP_06343646.1| DNA polymerase I [Staphylococcus aureus subsp. aureus H19]
gi|283460901|gb|EFC07991.1| DNA polymerase I [Staphylococcus aureus subsp. aureus H19]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|282916950|ref|ZP_06324708.1| DNA polymerase I [Staphylococcus aureus subsp. aureus D139]
gi|282319437|gb|EFB49789.1| DNA polymerase I [Staphylococcus aureus subsp. aureus D139]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|258424106|ref|ZP_05686988.1| DNA polymerase I [Staphylococcus aureus A9635]
gi|418889494|ref|ZP_13443627.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1524]
gi|257845727|gb|EEV69759.1| DNA polymerase I [Staphylococcus aureus A9635]
gi|377753002|gb|EHT76920.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1524]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|237752927|ref|ZP_04583407.1| DNA polymerase I [Helicobacter winghamensis ATCC BAA-430]
gi|229375194|gb|EEO25285.1| DNA polymerase I [Helicobacter winghamensis ATCC BAA-430]
Length = 889
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG + P+QFVD S+VGD ADN+PG++GIG A L+ +G L
Sbjct: 158 EQCMEKYG-VTPAQFVDYQSIVGDSADNVPGIKGIGAKGASNLLKTYGCL 206
>gi|118340598|gb|ABK80648.1| putative DNA polymerase I [uncultured marine Nitrospinaceae
bacterium]
Length = 894
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG+E+ K+G + P + +DV+ L+GD +D+IPGV+G+G A +LI KF +
Sbjct: 159 FGVEEVQEKFG-VTPDKVIDVMGLMGDSSDHIPGVKGVGPKTASELIRKFSSM 210
>gi|408356302|ref|YP_006844833.1| DNA polymerase I [Amphibacillus xylanus NBRC 15112]
gi|407727073|dbj|BAM47071.1| DNA polymerase I [Amphibacillus xylanus NBRC 15112]
Length = 880
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+F + +KP Q +D+ +L+GD +DNIPGV G+G+ A++L+ +FG L
Sbjct: 165 EFLEEKLTIKPEQVIDMKALMGDSSDNIPGVTGVGEKTAIKLLNQFGTL 213
>gi|443321692|ref|ZP_21050736.1| DNA polymerase I [Gloeocapsa sp. PCC 73106]
gi|442788604|gb|ELR98293.1| DNA polymerase I [Gloeocapsa sp. PCC 73106]
Length = 914
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+KP Q VD +L GDK+DNIPGV GIG+ ++L+T +G L
Sbjct: 183 IKPEQVVDYKALCGDKSDNIPGVRGIGEKTTLKLLTTYGSL 223
>gi|387907082|ref|YP_006337417.1| DNA polymerase I [Blattabacterium sp. (Blaberus giganteus)]
gi|387581974|gb|AFJ90752.1| DNA polymerase I [Blattabacterium sp. (Blaberus giganteus)]
Length = 300
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+G P Q +D+ S+ GD +DNIPG+ G+G A++ I K+G +
Sbjct: 164 LGIEEIKEKFGVNHPKQVIDLWSMTGDPSDNIPGLPGVGIKNAMKFIKKYGSI 216
>gi|418598726|ref|ZP_13162234.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21343]
gi|374399052|gb|EHQ70201.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21343]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418283958|ref|ZP_12896692.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21202]
gi|365165353|gb|EHM57141.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21202]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|417890158|ref|ZP_12534237.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21200]
gi|341855851|gb|EGS96695.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21200]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|417903167|ref|ZP_12547022.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21269]
gi|341850341|gb|EGS91465.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21269]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|386831289|ref|YP_006237943.1| DNA polymerase I [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|417799917|ref|ZP_12447049.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21310]
gi|334272449|gb|EGL90814.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21310]
gi|385196681|emb|CCG16311.1| DNA polymerase I [Staphylococcus aureus subsp. aureus HO 5096 0412]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|282909001|ref|ZP_06316819.1| DNA polymerase I [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282327265|gb|EFB57560.1| DNA polymerase I [Staphylococcus aureus subsp. aureus WW2703/97]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|149917649|ref|ZP_01906145.1| DNA polymerase I [Plesiocystis pacifica SIR-1]
gi|149821431|gb|EDM80831.1| DNA polymerase I [Plesiocystis pacifica SIR-1]
Length = 898
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+F E +K+G + PS F+D ++LVGDK DNIPGV GIG A +L+ +G L
Sbjct: 158 TFDAELVRKKWG-VPPSLFIDYLALVGDKVDNIPGVPGIGPKTAKKLLDAYGDL 210
>gi|315658046|ref|ZP_07910919.1| DNA-directed DNA polymerase I [Staphylococcus lugdunensis M23590]
gi|315496936|gb|EFU85258.1| DNA-directed DNA polymerase I [Staphylococcus lugdunensis M23590]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYNGLLPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|289550552|ref|YP_003471456.1| DNA polymerase I [Staphylococcus lugdunensis HKU09-01]
gi|385784181|ref|YP_005760354.1| DNA polymerase I [Staphylococcus lugdunensis N920143]
gi|418413857|ref|ZP_12987073.1| DNA polymerase I [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|289180084|gb|ADC87329.1| DNA polymerase I [Staphylococcus lugdunensis HKU09-01]
gi|339894437|emb|CCB53715.1| DNA polymerase I [Staphylococcus lugdunensis N920143]
gi|410877495|gb|EKS25387.1| DNA polymerase I [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYNGLLPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|297569901|ref|YP_003691245.1| DNA polymerase I [Desulfurivibrio alkaliphilus AHT2]
gi|296925816|gb|ADH86626.1| DNA polymerase I [Desulfurivibrio alkaliphilus AHT2]
Length = 914
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A+KY ++ P Q +D +L+GD +DN+PGV G+G A +LI +FG L
Sbjct: 164 AKKY-QVSPQQLLDYFALIGDSSDNVPGVPGVGPKTAAKLIDQFGSL 209
>gi|256750990|ref|ZP_05491873.1| DNA polymerase I [Thermoanaerobacter ethanolicus CCSD1]
gi|256750100|gb|EEU63121.1| DNA polymerase I [Thermoanaerobacter ethanolicus CCSD1]
Length = 872
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 6 MEDFARK----YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVE 61
ME+F K E+ P QF+D+ L+GDK+DNIPG+ IG+ A++L+ FG + ++
Sbjct: 156 MEEFDEKAVLERYEITPHQFIDLKGLMGDKSDNIPGIPNIGEKTAIKLLKDFGTIENLLQ 215
Query: 62 CFSEM 66
S++
Sbjct: 216 NLSQL 220
>gi|49483932|ref|YP_041156.1| DNA polymerase I [Staphylococcus aureus subsp. aureus MRSA252]
gi|49242061|emb|CAG40760.1| DNA polymerase I [Staphylococcus aureus subsp. aureus MRSA252]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|232010|sp|P30313.1|DPO1F_THETH RecName: Full=DNA polymerase I, thermostable; AltName: Full=Tfl
polymerase 1
gi|281488|pir||S26675 DNA-directed DNA polymerase (EC 2.7.7.7) I - Thermus aquaticus
gi|48166|emb|CAA46900.1| DNA-directed DNA polymerase [Thermus thermophilus]
Length = 831
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +L GD +DNIPGV+GIG+ A +LI ++G L
Sbjct: 170 KYG-LRPEQWVDYRALAGDPSDNIPGVKGIGEKTAQRLIREWGSL 213
>gi|418994409|ref|ZP_13542044.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG290]
gi|377744206|gb|EHT68184.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG290]
Length = 855
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 141 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 187
>gi|418562678|ref|ZP_13127135.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21262]
gi|371973782|gb|EHO91130.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21262]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418316890|ref|ZP_12928321.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21340]
gi|365240291|gb|EHM81073.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21340]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418314051|ref|ZP_12925532.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21334]
gi|448743236|ref|ZP_21725146.1| DNA-directed DNA polymerase [Staphylococcus aureus KT/Y21]
gi|365234445|gb|EHM75378.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21334]
gi|445563365|gb|ELY19526.1| DNA-directed DNA polymerase [Staphylococcus aureus KT/Y21]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|385781965|ref|YP_005758136.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 11819-97]
gi|418572463|ref|ZP_13136674.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21333]
gi|364522954|gb|AEW65704.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 11819-97]
gi|371984516|gb|EHP01628.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21333]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|379021466|ref|YP_005298128.1| DNA polymerase I [Staphylococcus aureus subsp. aureus M013]
gi|359830775|gb|AEV78753.1| DNA polymerase I [Staphylococcus aureus subsp. aureus M013]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|282927820|ref|ZP_06335431.1| DNA polymerase I [Staphylococcus aureus A10102]
gi|282590330|gb|EFB95409.1| DNA polymerase I [Staphylococcus aureus A10102]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|220929491|ref|YP_002506400.1| DNA polymerase I [Clostridium cellulolyticum H10]
gi|219999819|gb|ACL76420.1| DNA polymerase I [Clostridium cellulolyticum H10]
Length = 896
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KYG + P Q +DV L+GD +DNIPGV GIG+ A+ LI KF L
Sbjct: 167 YDYEKVIEKYG-VTPGQLIDVKGLMGDTSDNIPGVPGIGEKTALALIKKFNSL 218
>gi|15924680|ref|NP_372214.1| DNA polymerase I [Staphylococcus aureus subsp. aureus Mu50]
gi|15927268|ref|NP_374801.1| DNA polymerase I [Staphylococcus aureus subsp. aureus N315]
gi|148268170|ref|YP_001247113.1| DNA polymerase I [Staphylococcus aureus subsp. aureus JH9]
gi|150394237|ref|YP_001316912.1| DNA polymerase I [Staphylococcus aureus subsp. aureus JH1]
gi|156980007|ref|YP_001442266.1| DNA polymerase I [Staphylococcus aureus subsp. aureus Mu3]
gi|253317166|ref|ZP_04840379.1| DNA polymerase I [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006474|ref|ZP_05145075.2| DNA polymerase I [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257794075|ref|ZP_05643054.1| DNA polymerase I [Staphylococcus aureus A9781]
gi|258415779|ref|ZP_05682050.1| DNA polymerase I [Staphylococcus aureus A9763]
gi|258421984|ref|ZP_05684904.1| DNA polymerase I [Staphylococcus aureus A9719]
gi|258438258|ref|ZP_05689542.1| DNA polymerase I [Staphylococcus aureus A9299]
gi|258443716|ref|ZP_05692055.1| DNA polymerase I [Staphylococcus aureus A8115]
gi|258445927|ref|ZP_05694103.1| DNA polymerase I [Staphylococcus aureus A6300]
gi|258448392|ref|ZP_05696509.1| DNA polymerase I [Staphylococcus aureus A6224]
gi|258454127|ref|ZP_05702098.1| DNA polymerase I [Staphylococcus aureus A5937]
gi|269203308|ref|YP_003282577.1| DNA polymerase I [Staphylococcus aureus subsp. aureus ED98]
gi|282893185|ref|ZP_06301419.1| DNA polymerase I [Staphylococcus aureus A8117]
gi|295406000|ref|ZP_06815808.1| DNA polymerase I [Staphylococcus aureus A8819]
gi|296274883|ref|ZP_06857390.1| DNA polymerase I [Staphylococcus aureus subsp. aureus MR1]
gi|297245074|ref|ZP_06928951.1| DNA polymerase I [Staphylococcus aureus A8796]
gi|384864901|ref|YP_005750260.1| DNA polymerase I [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387150834|ref|YP_005742398.1| DNA polymerase I [Staphylococcus aureus 04-02981]
gi|415691848|ref|ZP_11453938.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CGS03]
gi|417651070|ref|ZP_12300833.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21172]
gi|417894372|ref|ZP_12538391.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21201]
gi|418424868|ref|ZP_12997980.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS1]
gi|418427823|ref|ZP_13000827.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS2]
gi|418430666|ref|ZP_13003575.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS3a]
gi|418434293|ref|ZP_13006405.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS4]
gi|418437307|ref|ZP_13009101.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS5]
gi|418440204|ref|ZP_13011903.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS6]
gi|418443222|ref|ZP_13014820.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS7]
gi|418446286|ref|ZP_13017758.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS8]
gi|418449307|ref|ZP_13020689.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS9]
gi|418452111|ref|ZP_13023444.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS10]
gi|418455108|ref|ZP_13026366.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS11a]
gi|418457986|ref|ZP_13029184.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS11b]
gi|418567004|ref|ZP_13131369.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21272]
gi|418638536|ref|ZP_13200824.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-3]
gi|418654595|ref|ZP_13216494.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-99]
gi|418663289|ref|ZP_13224810.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-122]
gi|418878613|ref|ZP_13432847.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1165]
gi|418881380|ref|ZP_13435596.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1213]
gi|418884197|ref|ZP_13438389.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1769]
gi|418886947|ref|ZP_13441094.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1150]
gi|418895458|ref|ZP_13449552.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1057]
gi|418914783|ref|ZP_13468753.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418920720|ref|ZP_13474651.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC348]
gi|418932007|ref|ZP_13485841.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1750]
gi|419785075|ref|ZP_14310831.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-M]
gi|424775071|ref|ZP_18202070.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
CM05]
gi|443636046|ref|ZP_21120164.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21236]
gi|13701486|dbj|BAB42780.1| DNA polymerase I [Staphylococcus aureus subsp. aureus N315]
gi|14247462|dbj|BAB57852.1| DNA polymerase I [Staphylococcus aureus subsp. aureus Mu50]
gi|147741239|gb|ABQ49537.1| DNA polymerase I [Staphylococcus aureus subsp. aureus JH9]
gi|149946689|gb|ABR52625.1| DNA polymerase I [Staphylococcus aureus subsp. aureus JH1]
gi|156722142|dbj|BAF78559.1| DNA polymerase I [Staphylococcus aureus subsp. aureus Mu3]
gi|257788047|gb|EEV26387.1| DNA polymerase I [Staphylococcus aureus A9781]
gi|257839372|gb|EEV63845.1| DNA polymerase I [Staphylococcus aureus A9763]
gi|257842028|gb|EEV66457.1| DNA polymerase I [Staphylococcus aureus A9719]
gi|257848302|gb|EEV72293.1| DNA polymerase I [Staphylococcus aureus A9299]
gi|257851122|gb|EEV75065.1| DNA polymerase I [Staphylococcus aureus A8115]
gi|257855169|gb|EEV78108.1| DNA polymerase I [Staphylococcus aureus A6300]
gi|257858360|gb|EEV81245.1| DNA polymerase I [Staphylococcus aureus A6224]
gi|257863579|gb|EEV86336.1| DNA polymerase I [Staphylococcus aureus A5937]
gi|262075598|gb|ACY11571.1| DNA polymerase I [Staphylococcus aureus subsp. aureus ED98]
gi|282764503|gb|EFC04629.1| DNA polymerase I [Staphylococcus aureus A8117]
gi|285817373|gb|ADC37860.1| DNA polymerase I [Staphylococcus aureus 04-02981]
gi|294968997|gb|EFG45018.1| DNA polymerase I [Staphylococcus aureus A8819]
gi|297178154|gb|EFH37402.1| DNA polymerase I [Staphylococcus aureus A8796]
gi|312830068|emb|CBX34910.1| DNA polymerase I (POL I) [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315130676|gb|EFT86662.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CGS03]
gi|329727254|gb|EGG63710.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21172]
gi|341852517|gb|EGS93406.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21201]
gi|371982708|gb|EHO99856.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21272]
gi|375014794|gb|EHS08466.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-99]
gi|375021104|gb|EHS14609.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-3]
gi|375034357|gb|EHS27522.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-122]
gi|377693499|gb|EHT17869.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1165]
gi|377693900|gb|EHT18268.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1057]
gi|377712403|gb|EHT36620.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1750]
gi|377714024|gb|EHT38228.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1769]
gi|377724449|gb|EHT48565.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1150]
gi|377730721|gb|EHT54787.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1213]
gi|377755439|gb|EHT79338.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377763575|gb|EHT87430.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC348]
gi|383363327|gb|EID40665.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-M]
gi|387717699|gb|EIK05698.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS2]
gi|387717806|gb|EIK05804.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS3a]
gi|387718834|gb|EIK06791.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS1]
gi|387724626|gb|EIK12275.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS4]
gi|387726807|gb|EIK14349.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS5]
gi|387729745|gb|EIK17163.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS6]
gi|387734968|gb|EIK22111.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS8]
gi|387736176|gb|EIK23278.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS9]
gi|387736295|gb|EIK23391.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS7]
gi|387744249|gb|EIK31019.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS10]
gi|387744395|gb|EIK31161.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS11a]
gi|387746107|gb|EIK32841.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VRS11b]
gi|402346929|gb|EJU81999.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
CM05]
gi|408423779|emb|CCJ11190.1| DNA polymerase [Staphylococcus aureus subsp. aureus ST228]
gi|408425769|emb|CCJ13156.1| DNA polymerase [Staphylococcus aureus subsp. aureus ST228]
gi|408427756|emb|CCJ15119.1| DNA polymerase [Staphylococcus aureus subsp. aureus ST228]
gi|408429745|emb|CCJ26910.1| DNA polymerase [Staphylococcus aureus subsp. aureus ST228]
gi|408431732|emb|CCJ19047.1| DNA polymerase [Staphylococcus aureus subsp. aureus ST228]
gi|408433726|emb|CCJ21011.1| DNA polymerase [Staphylococcus aureus subsp. aureus ST228]
gi|408435718|emb|CCJ22978.1| DNA polymerase [Staphylococcus aureus subsp. aureus ST228]
gi|408437702|emb|CCJ24945.1| DNA polymerase [Staphylococcus aureus subsp. aureus ST228]
gi|443408555|gb|ELS67074.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21236]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|237756074|ref|ZP_04584652.1| DNA polymerase I, thermostable [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691767|gb|EEP60797.1| DNA polymerase I, thermostable [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 299
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG + P QF+D ++++GD DNIPG++GIG A L+ +FG L
Sbjct: 159 EKIKEKYG-IYPQQFIDYLTMIGDAVDNIPGIKGIGPKTAAALLQEFGSL 207
>gi|442804423|ref|YP_007372572.1| DNA polymerase I [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|38146981|gb|AAR11875.1| DNA polymerase I [Clostridium stercorarium]
gi|442740273|gb|AGC67962.1| DNA polymerase I [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 898
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L P Q +DV L+GD +DNIPGV G+G+ A+ LI+ +G L
Sbjct: 173 KYGVL-PHQLIDVKGLMGDSSDNIPGVPGVGEKTALSLISAYGTL 216
>gi|428778220|ref|YP_007170007.1| DNA polymerase I [Halothece sp. PCC 7418]
gi|428692499|gb|AFZ45793.1| DNA polymerase I [Halothece sp. PCC 7418]
Length = 958
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++P Q +D +L GDK+DNIPGV GIG+ AV+L+ ++G L
Sbjct: 185 IQPQQVIDYKALCGDKSDNIPGVNGIGEKTAVKLLQQYGTL 225
>gi|167040779|ref|YP_001663764.1| DNA polymerase I [Thermoanaerobacter sp. X514]
gi|300914817|ref|ZP_07132133.1| DNA polymerase I [Thermoanaerobacter sp. X561]
gi|307723949|ref|YP_003903700.1| DNA polymerase I [Thermoanaerobacter sp. X513]
gi|166855019|gb|ABY93428.1| DNA polymerase I [Thermoanaerobacter sp. X514]
gi|300889752|gb|EFK84898.1| DNA polymerase I [Thermoanaerobacter sp. X561]
gi|307581010|gb|ADN54409.1| DNA polymerase I [Thermoanaerobacter sp. X513]
Length = 872
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 6 MEDFARK----YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVE 61
ME+F K E+ P QF+D+ L+GDK+DNIPG+ IG+ A++L+ FG + ++
Sbjct: 156 MEEFDEKAVLERYEITPHQFIDLKGLMGDKSDNIPGIPNIGEKTAIKLLKDFGTIENLLQ 215
Query: 62 CFSEM 66
S++
Sbjct: 216 NLSQL 220
>gi|117922540|ref|YP_871732.1| DNA polymerase I [Shewanella sp. ANA-3]
gi|117614872|gb|ABK50326.1| DNA polymerase I [Shewanella sp. ANA-3]
Length = 922
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G E+ A KYG + P + +D ++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPEEVAAKYG-VGPDRIIDFLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|423090703|ref|ZP_17078989.1| DNA-directed DNA polymerase [Clostridium difficile 70-100-2010]
gi|357555818|gb|EHJ37440.1| DNA-directed DNA polymerase [Clostridium difficile 70-100-2010]
Length = 882
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E+ P+QF+D+ L+GDK+DNIPGV GIG+ ++LI +F
Sbjct: 170 EMTPTQFIDLKGLMGDKSDNIPGVPGIGEKTGIKLIKEF 208
>gi|423082473|ref|ZP_17071065.1| DNA-directed DNA polymerase [Clostridium difficile 002-P50-2011]
gi|423087885|ref|ZP_17076271.1| DNA-directed DNA polymerase [Clostridium difficile 050-P50-2011]
gi|357544199|gb|EHJ26205.1| DNA-directed DNA polymerase [Clostridium difficile 050-P50-2011]
gi|357548799|gb|EHJ30659.1| DNA-directed DNA polymerase [Clostridium difficile 002-P50-2011]
Length = 882
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E+ P+QF+D+ L+GDK+DNIPGV GIG+ ++LI +F
Sbjct: 170 EMTPTQFIDLKGLMGDKSDNIPGVPGIGEKTGIKLIKEF 208
>gi|317129905|ref|YP_004096187.1| DNA polymerase I [Bacillus cellulosilyticus DSM 2522]
gi|315474853|gb|ADU31456.1| DNA polymerase I [Bacillus cellulosilyticus DSM 2522]
Length = 874
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++ ++ KYG +KP Q +D+ L+GD +DNIPGV G+G+ A++L+ +FG +
Sbjct: 158 TYDLQMIDEKYG-IKPEQIIDMKGLMGDASDNIPGVPGVGEKTALKLLKQFGTV 210
>gi|255306032|ref|ZP_05350204.1| DNA polymerase I [Clostridium difficile ATCC 43255]
Length = 882
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E+ P+QF+D+ L+GDK+DNIPGV GIG+ ++LI +F
Sbjct: 170 EMTPTQFIDLKGLMGDKSDNIPGVPGIGEKTGIKLIKEF 208
>gi|126698722|ref|YP_001087619.1| DNA polymerase I [Clostridium difficile 630]
gi|255100142|ref|ZP_05329119.1| DNA polymerase I [Clostridium difficile QCD-63q42]
gi|115250159|emb|CAJ67980.1| DNA polymerase I (POLI) [Clostridium difficile 630]
Length = 882
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E+ P+QF+D+ L+GDK+DNIPGV GIG+ ++LI +F
Sbjct: 170 EMTPTQFIDLKGLMGDKSDNIPGVPGIGEKTGIKLIKEF 208
>gi|448740406|ref|ZP_21722385.1| DNA polymerase I [Staphylococcus aureus KT/314250]
gi|445548890|gb|ELY17137.1| DNA polymerase I [Staphylococcus aureus KT/314250]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|21283362|ref|NP_646450.1| DNA polymerase I [Staphylococcus aureus subsp. aureus MW2]
gi|49486516|ref|YP_043737.1| DNA polymerase I [Staphylococcus aureus subsp. aureus MSSA476]
gi|57650561|ref|YP_186574.1| DNA polymerase I [Staphylococcus aureus subsp. aureus COL]
gi|87161466|ref|YP_494331.1| DNA polymerase I superfamily protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195497|ref|YP_500301.1| DNA polymerase I [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221795|ref|YP_001332617.1| DNA polymerase I [Staphylococcus aureus subsp. aureus str. Newman]
gi|161509904|ref|YP_001575563.1| DNA polymerase I [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142560|ref|ZP_03567053.1| DNA polymerase I [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|253732341|ref|ZP_04866506.1| DNA polymerase I [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|258451796|ref|ZP_05699818.1| DNA polymerase I [Staphylococcus aureus A5948]
gi|262052261|ref|ZP_06024466.1| DNA polymerase I [Staphylococcus aureus 930918-3]
gi|282920230|ref|ZP_06327955.1| DNA polymerase I [Staphylococcus aureus A9765]
gi|284024738|ref|ZP_06379136.1| DNA polymerase I superfamily protein [Staphylococcus aureus subsp.
aureus 132]
gi|294848711|ref|ZP_06789457.1| DNA polymerase I [Staphylococcus aureus A9754]
gi|297207597|ref|ZP_06924032.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300911679|ref|ZP_07129123.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380719|ref|ZP_07363388.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|379014888|ref|YP_005291124.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VC40]
gi|384862287|ref|YP_005745007.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|384870227|ref|YP_005752941.1| DNA polymerase I [Staphylococcus aureus subsp. aureus T0131]
gi|387143287|ref|YP_005731680.1| DNA polymerase I [Staphylococcus aureus subsp. aureus TW20]
gi|415686120|ref|ZP_11450257.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
CGS01]
gi|417649228|ref|ZP_12299032.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21189]
gi|417796440|ref|ZP_12443650.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21305]
gi|418277896|ref|ZP_12892116.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21178]
gi|418284386|ref|ZP_12897111.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21209]
gi|418571924|ref|ZP_13136144.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21283]
gi|418579604|ref|ZP_13143699.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1114]
gi|418641675|ref|ZP_13203880.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-24]
gi|418644063|ref|ZP_13206214.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-55]
gi|418648452|ref|ZP_13210496.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-88]
gi|418650559|ref|ZP_13212577.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-91]
gi|418659508|ref|ZP_13221178.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-111]
gi|418871917|ref|ZP_13426280.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-125]
gi|418903986|ref|ZP_13458027.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1770]
gi|418906624|ref|ZP_13460650.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC345D]
gi|418912312|ref|ZP_13466292.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG547]
gi|418925938|ref|ZP_13479840.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG2018]
gi|418929029|ref|ZP_13482915.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1612]
gi|418934650|ref|ZP_13488472.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC128]
gi|418947562|ref|ZP_13499922.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-157]
gi|418953954|ref|ZP_13505935.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-189]
gi|418988746|ref|ZP_13536418.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1835]
gi|421148440|ref|ZP_15608100.1| DNA polymerase I [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|422742534|ref|ZP_16796537.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422746024|ref|ZP_16799957.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424785572|ref|ZP_18212373.1| DNA polymerase I [Staphylococcus aureus CN79]
gi|440707376|ref|ZP_20888075.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21282]
gi|440735131|ref|ZP_20914742.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|443639955|ref|ZP_21123955.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21196]
gi|6110605|gb|AAF03894.1|AF193842_1 DNA polymerase I [Staphylococcus aureus]
gi|21204802|dbj|BAB95498.1| DNA polymerase I [Staphylococcus aureus subsp. aureus MW2]
gi|49244959|emb|CAG43420.1| DNA polymerase I [Staphylococcus aureus subsp. aureus MSSA476]
gi|57284747|gb|AAW36841.1| DNA polymerase I [Staphylococcus aureus subsp. aureus COL]
gi|87127440|gb|ABD21954.1| DNA polymerase I superfamily [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203055|gb|ABD30865.1| DNA polymerase I [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|150374595|dbj|BAF67855.1| DNA polymerase I [Staphylococcus aureus subsp. aureus str. Newman]
gi|160368713|gb|ABX29684.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253723863|gb|EES92592.1| DNA polymerase I [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257860508|gb|EEV83334.1| DNA polymerase I [Staphylococcus aureus A5948]
gi|259159862|gb|EEW44901.1| DNA polymerase I [Staphylococcus aureus 930918-3]
gi|269941170|emb|CBI49557.1| DNA polymerase I [Staphylococcus aureus subsp. aureus TW20]
gi|282594578|gb|EFB99563.1| DNA polymerase I [Staphylococcus aureus A9765]
gi|294824737|gb|EFG41160.1| DNA polymerase I [Staphylococcus aureus A9754]
gi|296887614|gb|EFH26512.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300887100|gb|EFK82301.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
TCH70]
gi|302751516|gb|ADL65693.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340718|gb|EFM06649.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|315198613|gb|EFU28941.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140432|gb|EFW32286.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143970|gb|EFW35739.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329314362|gb|AEB88775.1| DNA polymerase I [Staphylococcus aureus subsp. aureus T0131]
gi|329728334|gb|EGG64771.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21189]
gi|334269144|gb|EGL87572.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21305]
gi|365172855|gb|EHM63517.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21178]
gi|365173573|gb|EHM64063.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21209]
gi|371978416|gb|EHO95665.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21283]
gi|374363585|gb|AEZ37690.1| DNA polymerase I [Staphylococcus aureus subsp. aureus VC40]
gi|375018130|gb|EHS11710.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-24]
gi|375026365|gb|EHS19748.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-88]
gi|375026584|gb|EHS19964.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-55]
gi|375027845|gb|EHS21203.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-91]
gi|375035106|gb|EHS28240.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-111]
gi|375367702|gb|EHS71646.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-125]
gi|375373884|gb|EHS77538.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-189]
gi|375375325|gb|EHS78911.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-157]
gi|377697631|gb|EHT21986.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1114]
gi|377717839|gb|EHT42014.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1835]
gi|377721966|gb|EHT46094.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG547]
gi|377738941|gb|EHT62950.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1612]
gi|377743001|gb|EHT66986.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1770]
gi|377745007|gb|EHT68984.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG2018]
gi|377763529|gb|EHT87385.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377770744|gb|EHT94505.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC128]
gi|394331583|gb|EJE57666.1| DNA polymerase I [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|421956068|gb|EKU08398.1| DNA polymerase I [Staphylococcus aureus CN79]
gi|436431226|gb|ELP28580.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|436506132|gb|ELP41971.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21282]
gi|443406230|gb|ELS64814.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21196]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|386729380|ref|YP_006195763.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 71193]
gi|404479040|ref|YP_006710470.1| DNA polymerase I [Staphylococcus aureus 08BA02176]
gi|418978403|ref|ZP_13526204.1| DNA polymerase I [Staphylococcus aureus subsp. aureus DR10]
gi|379994019|gb|EIA15464.1| DNA polymerase I [Staphylococcus aureus subsp. aureus DR10]
gi|384230673|gb|AFH69920.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 71193]
gi|404440529|gb|AFR73722.1| DNA polymerase I [Staphylococcus aureus 08BA02176]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418875620|ref|ZP_13429876.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC93]
gi|377769692|gb|EHT93460.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC93]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418991626|ref|ZP_13539286.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1096]
gi|377721762|gb|EHT45891.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1096]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418655487|ref|ZP_13217342.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Staphylococcus aureus subsp. aureus IS-105]
gi|375036845|gb|EHS29908.1| 5'-3' exonuclease, N-terminal resolvase-like domain protein
[Staphylococcus aureus subsp. aureus IS-105]
Length = 440
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418560420|ref|ZP_13124935.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21252]
gi|371971980|gb|EHO89371.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21252]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418318476|ref|ZP_12929878.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21232]
gi|365242939|gb|EHM83634.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21232]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418310177|ref|ZP_12921727.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21331]
gi|365237634|gb|EHM78480.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21331]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|365132882|ref|ZP_09342443.1| DNA polymerase I [Subdoligranulum sp. 4_3_54A2FAA]
gi|363616202|gb|EHL67651.1| DNA polymerase I [Subdoligranulum sp. 4_3_54A2FAA]
Length = 844
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG ++P Q ++V SL+GD +DNIPGV G+G+ A+ LI FG L
Sbjct: 168 KYG-VRPRQLIEVKSLMGDASDNIPGVAGVGEKTALALIQDFGSL 211
>gi|417899316|ref|ZP_12543223.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21259]
gi|417901097|ref|ZP_12544974.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21266]
gi|341846120|gb|EGS87318.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21259]
gi|341846256|gb|EGS87453.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21266]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|417653472|ref|ZP_12303203.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21193]
gi|329733163|gb|EGG69500.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21193]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|416839628|ref|ZP_11903009.1| DNA polymerase I [Staphylococcus aureus O11]
gi|416846352|ref|ZP_11906493.1| DNA polymerase I [Staphylococcus aureus O46]
gi|323440766|gb|EGA98475.1| DNA polymerase I [Staphylococcus aureus O11]
gi|323442921|gb|EGB00544.1| DNA polymerase I [Staphylococcus aureus O46]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|384547911|ref|YP_005737164.1| DNA polymerase I [Staphylococcus aureus subsp. aureus ED133]
gi|387780768|ref|YP_005755566.1| DNA polymerase I [Staphylococcus aureus subsp. aureus LGA251]
gi|298694960|gb|ADI98182.1| DNA polymerase I [Staphylococcus aureus subsp. aureus ED133]
gi|344177870|emb|CCC88349.1| DNA polymerase I [Staphylococcus aureus subsp. aureus LGA251]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|387603019|ref|YP_005734540.1| DNA polymerase I (POL I) [Staphylococcus aureus subsp. aureus
ST398]
gi|283470957|emb|CAQ50168.1| DNA polymerase I (POL I) [Staphylococcus aureus subsp. aureus
ST398]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|282919455|ref|ZP_06327190.1| DNA polymerase I [Staphylococcus aureus subsp. aureus C427]
gi|282317265|gb|EFB47639.1| DNA polymerase I [Staphylococcus aureus subsp. aureus C427]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|253734526|ref|ZP_04868691.1| DNA polymerase I [Staphylococcus aureus subsp. aureus TCH130]
gi|253727467|gb|EES96196.1| DNA polymerase I [Staphylococcus aureus subsp. aureus TCH130]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|282911317|ref|ZP_06319119.1| DNA polymerase I [Staphylococcus aureus subsp. aureus WBG10049]
gi|384867347|ref|YP_005747543.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
TCH60]
gi|282325012|gb|EFB55322.1| DNA polymerase I [Staphylococcus aureus subsp. aureus WBG10049]
gi|312437852|gb|ADQ76923.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
TCH60]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|257425805|ref|ZP_05602229.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428471|ref|ZP_05604869.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431105|ref|ZP_05607482.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 68-397]
gi|257433788|ref|ZP_05610146.1| DNA polymerase I [Staphylococcus aureus subsp. aureus E1410]
gi|257436704|ref|ZP_05612748.1| DNA polymerase I [Staphylococcus aureus subsp. aureus M876]
gi|282904261|ref|ZP_06312149.1| DNA polymerase I [Staphylococcus aureus subsp. aureus C160]
gi|282906086|ref|ZP_06313941.1| DNA polymerase I [Staphylococcus aureus subsp. aureus Btn1260]
gi|282914486|ref|ZP_06322272.1| DNA polymerase I [Staphylococcus aureus subsp. aureus M899]
gi|282924832|ref|ZP_06332498.1| DNA polymerase I [Staphylococcus aureus subsp. aureus C101]
gi|283958441|ref|ZP_06375892.1| DNA polymerase I [Staphylococcus aureus subsp. aureus A017934/97]
gi|293503564|ref|ZP_06667411.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 58-424]
gi|293510579|ref|ZP_06669284.1| DNA polymerase I [Staphylococcus aureus subsp. aureus M809]
gi|293537121|ref|ZP_06671801.1| DNA polymerase I [Staphylococcus aureus subsp. aureus M1015]
gi|295428261|ref|ZP_06820890.1| DNA polymerase I [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297590776|ref|ZP_06949414.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
MN8]
gi|415682494|ref|ZP_11447810.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CGS00]
gi|417889396|ref|ZP_12533486.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21195]
gi|418564804|ref|ZP_13129225.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21264]
gi|418582621|ref|ZP_13146697.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1605]
gi|418597453|ref|ZP_13160981.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21342]
gi|418601996|ref|ZP_13165410.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21345]
gi|418892427|ref|ZP_13446539.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1176]
gi|418901199|ref|ZP_13455254.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1214]
gi|418909547|ref|ZP_13463541.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG149]
gi|418917594|ref|ZP_13471552.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1267]
gi|418923380|ref|ZP_13477295.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1233]
gi|418982704|ref|ZP_13530411.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1242]
gi|418986369|ref|ZP_13534052.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1500]
gi|257271499|gb|EEV03645.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275312|gb|EEV06799.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278053|gb|EEV08701.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 68-397]
gi|257281881|gb|EEV12018.1| DNA polymerase I [Staphylococcus aureus subsp. aureus E1410]
gi|257284055|gb|EEV14178.1| DNA polymerase I [Staphylococcus aureus subsp. aureus M876]
gi|282313198|gb|EFB43594.1| DNA polymerase I [Staphylococcus aureus subsp. aureus C101]
gi|282321667|gb|EFB51992.1| DNA polymerase I [Staphylococcus aureus subsp. aureus M899]
gi|282331378|gb|EFB60892.1| DNA polymerase I [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595879|gb|EFC00843.1| DNA polymerase I [Staphylococcus aureus subsp. aureus C160]
gi|283790590|gb|EFC29407.1| DNA polymerase I [Staphylococcus aureus subsp. aureus A017934/97]
gi|290919966|gb|EFD97034.1| DNA polymerase I [Staphylococcus aureus subsp. aureus M1015]
gi|291095230|gb|EFE25495.1| DNA polymerase I [Staphylococcus aureus subsp. aureus 58-424]
gi|291466470|gb|EFF08991.1| DNA polymerase I [Staphylococcus aureus subsp. aureus M809]
gi|295127661|gb|EFG57298.1| DNA polymerase I [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297575662|gb|EFH94378.1| DNA-directed DNA polymerase I [Staphylococcus aureus subsp. aureus
MN8]
gi|315195594|gb|EFU25981.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CGS00]
gi|341851654|gb|EGS92568.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21195]
gi|371975941|gb|EHO93233.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21264]
gi|374394580|gb|EHQ65862.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21342]
gi|374397030|gb|EHQ68248.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
21345]
gi|377701868|gb|EHT26194.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1214]
gi|377703473|gb|EHT27787.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1500]
gi|377703749|gb|EHT28061.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1242]
gi|377709364|gb|EHT33617.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1605]
gi|377729903|gb|EHT53980.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1176]
gi|377734104|gb|EHT58143.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1233]
gi|377749659|gb|EHT73603.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG1267]
gi|377751356|gb|EHT75286.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIG149]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 8 DF-ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
DF A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 DFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|433654694|ref|YP_007298402.1| DNA polymerase I [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433292883|gb|AGB18705.1| DNA polymerase I [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 867
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+ P QF+D+ L+GDK+DNIPGV IG+ A++LI +FG +
Sbjct: 169 EVTPRQFIDLKGLMGDKSDNIPGVPNIGEKTAIKLIKEFGSI 210
>gi|255655127|ref|ZP_05400536.1| DNA polymerase I [Clostridium difficile QCD-23m63]
gi|296451114|ref|ZP_06892855.1| DNA-directed DNA polymerase I [Clostridium difficile NAP08]
gi|296880534|ref|ZP_06904496.1| DNA-directed DNA polymerase I [Clostridium difficile NAP07]
gi|296259935|gb|EFH06789.1| DNA-directed DNA polymerase I [Clostridium difficile NAP08]
gi|296428488|gb|EFH14373.1| DNA-directed DNA polymerase I [Clostridium difficile NAP07]
Length = 882
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E+ P+QF+D+ L+GDK+DNIPGV GIG+ ++LI +F
Sbjct: 170 EMTPTQFIDLKGLMGDKSDNIPGVPGIGEKTGIKLIKEF 208
>gi|417905998|ref|ZP_12549792.1| DNA-directed DNA polymerase [Staphylococcus capitis VCU116]
gi|341598384|gb|EGS40895.1| DNA-directed DNA polymerase [Staphylococcus capitis VCU116]
Length = 876
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L+P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYDGLEPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLKQF 208
>gi|24376141|ref|NP_720184.1| DNA polymerase I PolA [Shewanella oneidensis MR-1]
gi|24351181|gb|AAN57628.1| DNA polymerase I PolA [Shewanella oneidensis MR-1]
Length = 922
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G E+ A KYG + P + +D ++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPEEVAAKYG-VGPDRIIDFLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|402846384|ref|ZP_10894697.1| DNA-directed DNA polymerase [Porphyromonas sp. oral taxon 279 str.
F0450]
gi|402268085|gb|EJU17472.1| DNA-directed DNA polymerase [Porphyromonas sp. oral taxon 279 str.
F0450]
Length = 919
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G + K+G P+Q +D ++L+GDK DNIPG +GIG+ A +L++++G +
Sbjct: 161 WGEAEIREKFGLDSPAQVIDYLALLGDKVDNIPGCKGIGEKGAQKLLSEYGTV 213
>gi|325849919|ref|ZP_08170958.1| DNA-directed DNA polymerase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325479943|gb|EGC83026.1| DNA-directed DNA polymerase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 778
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 13 YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
YG L P Q +DV L+GDK+DNIPGV+GIG+ A++ I K+G +
Sbjct: 67 YG-LSPKQLIDVKGLMGDKSDNIPGVDGIGEKTALKYIKKYGSM 109
>gi|30022662|ref|NP_834293.1| DNA polymerase I [Bacillus cereus ATCC 14579]
gi|29898220|gb|AAP11494.1| DNA polymerase I [Bacillus cereus ATCC 14579]
Length = 891
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 177 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|408421334|ref|YP_006762748.1| DNA polymerase I PolA [Desulfobacula toluolica Tol2]
gi|405108547|emb|CCK82044.1| PolA: DNA polymerase I [Desulfobacula toluolica Tol2]
Length = 911
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P QF+D++ L GD +DNIPGV G+G A++LI +FG +
Sbjct: 175 IDPIQFIDILGLAGDSSDNIPGVRGVGPKTAIKLIAQFGSI 215
>gi|423650484|ref|ZP_17626054.1| DNA polymerase I [Bacillus cereus VD169]
gi|401281643|gb|EJR87549.1| DNA polymerase I [Bacillus cereus VD169]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|423640344|ref|ZP_17615962.1| DNA polymerase I [Bacillus cereus VD166]
gi|401281260|gb|EJR87173.1| DNA polymerase I [Bacillus cereus VD166]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|423631302|ref|ZP_17607049.1| DNA polymerase I [Bacillus cereus VD154]
gi|401263875|gb|EJR69991.1| DNA polymerase I [Bacillus cereus VD154]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|423582798|ref|ZP_17558909.1| DNA polymerase I [Bacillus cereus VD014]
gi|423634535|ref|ZP_17610188.1| DNA polymerase I [Bacillus cereus VD156]
gi|401211613|gb|EJR18360.1| DNA polymerase I [Bacillus cereus VD014]
gi|401280514|gb|EJR86434.1| DNA polymerase I [Bacillus cereus VD156]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|423438021|ref|ZP_17415002.1| DNA polymerase I [Bacillus cereus BAG4X12-1]
gi|401119634|gb|EJQ27445.1| DNA polymerase I [Bacillus cereus BAG4X12-1]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|319953575|ref|YP_004164842.1| DNA polymerase i [Cellulophaga algicola DSM 14237]
gi|319422235|gb|ADV49344.1| DNA polymerase I [Cellulophaga algicola DSM 14237]
Length = 945
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+ + +++G +P Q +D + ++GD +DNIPG+ G+GD A + I +FG +
Sbjct: 164 WGIPEIQKRFGVERPEQVIDYLGMMGDASDNIPGLPGVGDKTAKKFIEEFGSM 216
>gi|228960856|ref|ZP_04122489.1| DNA polymerase I [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228798752|gb|EEM45732.1| DNA polymerase I [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 891
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 177 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|229072089|ref|ZP_04205298.1| DNA polymerase I [Bacillus cereus F65185]
gi|229081839|ref|ZP_04214331.1| DNA polymerase I [Bacillus cereus Rock4-2]
gi|228701427|gb|EEL53921.1| DNA polymerase I [Bacillus cereus Rock4-2]
gi|228711023|gb|EEL62989.1| DNA polymerase I [Bacillus cereus F65185]
Length = 891
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 177 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|206969813|ref|ZP_03230767.1| DNA polymerase I [Bacillus cereus AH1134]
gi|365158631|ref|ZP_09354823.1| DNA polymerase I [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411629|ref|ZP_17388749.1| DNA polymerase I [Bacillus cereus BAG3O-2]
gi|423432584|ref|ZP_17409588.1| DNA polymerase I [Bacillus cereus BAG4O-1]
gi|206735501|gb|EDZ52669.1| DNA polymerase I [Bacillus cereus AH1134]
gi|363626504|gb|EHL77487.1| DNA polymerase I [Bacillus sp. 7_6_55CFAA_CT2]
gi|401104954|gb|EJQ12922.1| DNA polymerase I [Bacillus cereus BAG3O-2]
gi|401115717|gb|EJQ23564.1| DNA polymerase I [Bacillus cereus BAG4O-1]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|114049481|ref|YP_740031.1| DNA polymerase I [Shewanella sp. MR-7]
gi|113890923|gb|ABI44974.1| DNA polymerase I [Shewanella sp. MR-7]
Length = 922
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G E+ A KYG + P + +D ++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPEEVAAKYG-VGPDRIIDFLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|254974662|ref|ZP_05271134.1| DNA polymerase I [Clostridium difficile QCD-66c26]
gi|255092051|ref|ZP_05321529.1| DNA polymerase I [Clostridium difficile CIP 107932]
gi|255313787|ref|ZP_05355370.1| DNA polymerase I [Clostridium difficile QCD-76w55]
gi|255649569|ref|ZP_05396471.1| DNA polymerase I [Clostridium difficile QCD-37x79]
gi|260682732|ref|YP_003214017.1| DNA polymerase I [Clostridium difficile CD196]
gi|260686330|ref|YP_003217463.1| DNA polymerase I [Clostridium difficile R20291]
gi|306519696|ref|ZP_07406043.1| DNA polymerase I [Clostridium difficile QCD-32g58]
gi|384360315|ref|YP_006198167.1| DNA polymerase I [Clostridium difficile BI1]
gi|260208895|emb|CBA61872.1| DNA polymerase I [Clostridium difficile CD196]
gi|260212346|emb|CBE03147.1| DNA polymerase I [Clostridium difficile R20291]
Length = 882
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E+ P+QF+D+ L+GDK+DNIPGV GIG+ ++LI +F
Sbjct: 170 EMTPAQFIDLKGLMGDKSDNIPGVPGIGEKTGIKLIKEF 208
>gi|113972232|ref|YP_736025.1| DNA polymerase I [Shewanella sp. MR-4]
gi|113886916|gb|ABI40968.1| DNA polymerase I [Shewanella sp. MR-4]
Length = 922
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G E+ A KYG + P + +D ++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPEEVAAKYG-VGPDRIIDFLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|423584886|ref|ZP_17560973.1| DNA polymerase I [Bacillus cereus VD045]
gi|401235078|gb|EJR41551.1| DNA polymerase I [Bacillus cereus VD045]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|423426712|ref|ZP_17403743.1| DNA polymerase I [Bacillus cereus BAG3X2-2]
gi|423502738|ref|ZP_17479330.1| DNA polymerase I [Bacillus cereus HD73]
gi|449091540|ref|YP_007423981.1| DNA polymerase I [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|401110278|gb|EJQ18187.1| DNA polymerase I [Bacillus cereus BAG3X2-2]
gi|402459977|gb|EJV91705.1| DNA polymerase I [Bacillus cereus HD73]
gi|449025297|gb|AGE80460.1| DNA polymerase I [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|296505059|ref|YP_003666759.1| DNA polymerase I [Bacillus thuringiensis BMB171]
gi|423657526|ref|ZP_17632825.1| DNA polymerase I [Bacillus cereus VD200]
gi|296326111|gb|ADH09039.1| DNA polymerase I [Bacillus thuringiensis BMB171]
gi|401289082|gb|EJR94803.1| DNA polymerase I [Bacillus cereus VD200]
Length = 877
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|228923331|ref|ZP_04086619.1| DNA polymerase I [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228836285|gb|EEM81638.1| DNA polymerase I [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 891
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 177 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|228954856|ref|ZP_04116876.1| DNA polymerase I [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228804845|gb|EEM51444.1| DNA polymerase I [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 891
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 177 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|229112052|ref|ZP_04241595.1| DNA polymerase I [Bacillus cereus Rock1-15]
gi|228671375|gb|EEL26676.1| DNA polymerase I [Bacillus cereus Rock1-15]
Length = 891
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 177 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|229129871|ref|ZP_04258837.1| DNA polymerase I [Bacillus cereus BDRD-Cer4]
gi|229147147|ref|ZP_04275505.1| DNA polymerase I [Bacillus cereus BDRD-ST24]
gi|228636257|gb|EEK92729.1| DNA polymerase I [Bacillus cereus BDRD-ST24]
gi|228653562|gb|EEL09434.1| DNA polymerase I [Bacillus cereus BDRD-Cer4]
Length = 891
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 177 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|229180906|ref|ZP_04308241.1| DNA polymerase I [Bacillus cereus 172560W]
gi|229192788|ref|ZP_04319746.1| DNA polymerase I [Bacillus cereus ATCC 10876]
gi|228590627|gb|EEK48488.1| DNA polymerase I [Bacillus cereus ATCC 10876]
gi|228602463|gb|EEK59949.1| DNA polymerase I [Bacillus cereus 172560W]
Length = 891
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 177 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|296269454|ref|YP_003652086.1| DNA polymerase I [Thermobispora bispora DSM 43833]
gi|296092241|gb|ADG88193.1| DNA polymerase I [Thermobispora bispora DSM 43833]
Length = 893
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M F E KYG L+P+Q+ D +L GD +DN+PG+ G+G+ A + I +FG L
Sbjct: 167 MTRFTPEAVEEKYG-LRPAQYPDFAALRGDPSDNLPGIPGVGEKTAARWIKEFGSL 221
>gi|42783764|ref|NP_981011.1| DNA polymerase I [Bacillus cereus ATCC 10987]
gi|42739694|gb|AAS43619.1| DNA polymerase I [Bacillus cereus ATCC 10987]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|402555287|ref|YP_006596558.1| DNA polymerase I [Bacillus cereus FRI-35]
gi|401796497|gb|AFQ10356.1| DNA polymerase I [Bacillus cereus FRI-35]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|423573733|ref|ZP_17549852.1| DNA polymerase I [Bacillus cereus MSX-D12]
gi|401213832|gb|EJR20569.1| DNA polymerase I [Bacillus cereus MSX-D12]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|423373465|ref|ZP_17350804.1| DNA polymerase I [Bacillus cereus AND1407]
gi|401096429|gb|EJQ04476.1| DNA polymerase I [Bacillus cereus AND1407]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|402563898|ref|YP_006606622.1| DNA polymerase I [Bacillus thuringiensis HD-771]
gi|423358328|ref|ZP_17335831.1| DNA polymerase I [Bacillus cereus VD022]
gi|401086015|gb|EJP94247.1| DNA polymerase I [Bacillus cereus VD022]
gi|401792550|gb|AFQ18589.1| DNA polymerase I [Bacillus thuringiensis HD-771]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|384182395|ref|YP_005568157.1| DNA polymerase I [Bacillus thuringiensis serovar finitimus YBT-020]
gi|324328479|gb|ADY23739.1| DNA polymerase I [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|301056092|ref|YP_003794303.1| DNA polymerase I [Bacillus cereus biovar anthracis str. CI]
gi|423549677|ref|ZP_17526004.1| DNA polymerase I [Bacillus cereus ISP3191]
gi|300378261|gb|ADK07165.1| DNA polymerase I [Bacillus cereus biovar anthracis str. CI]
gi|401190473|gb|EJQ97515.1| DNA polymerase I [Bacillus cereus ISP3191]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|228987834|ref|ZP_04147943.1| DNA polymerase I [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228771882|gb|EEM20339.1| DNA polymerase I [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|229141312|ref|ZP_04269850.1| DNA polymerase I [Bacillus cereus BDRD-ST26]
gi|228642093|gb|EEK98386.1| DNA polymerase I [Bacillus cereus BDRD-ST26]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|229198735|ref|ZP_04325433.1| DNA polymerase I [Bacillus cereus m1293]
gi|228584757|gb|EEK42877.1| DNA polymerase I [Bacillus cereus m1293]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|222098048|ref|YP_002532105.1| DNA polymerase i [Bacillus cereus Q1]
gi|221242106|gb|ACM14816.1| DNA polymerase I [Bacillus cereus Q1]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|218899740|ref|YP_002448151.1| DNA polymerase I [Bacillus cereus G9842]
gi|423560905|ref|ZP_17537181.1| DNA polymerase I [Bacillus cereus MSX-A1]
gi|434377740|ref|YP_006612384.1| DNA polymerase I [Bacillus thuringiensis HD-789]
gi|218542969|gb|ACK95363.1| DNA polymerase I [Bacillus cereus G9842]
gi|401202750|gb|EJR09600.1| DNA polymerase I [Bacillus cereus MSX-A1]
gi|401876297|gb|AFQ28464.1| DNA polymerase I [Bacillus thuringiensis HD-789]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|206977131|ref|ZP_03238030.1| DNA polymerase I [Bacillus cereus H3081.97]
gi|217962066|ref|YP_002340636.1| DNA polymerase I [Bacillus cereus AH187]
gi|375286581|ref|YP_005107020.1| DNA polymerase I [Bacillus cereus NC7401]
gi|423355067|ref|ZP_17332692.1| DNA polymerase I [Bacillus cereus IS075]
gi|423570813|ref|ZP_17547058.1| DNA polymerase I [Bacillus cereus MSX-A12]
gi|423603737|ref|ZP_17579630.1| DNA polymerase I [Bacillus cereus VD102]
gi|206744616|gb|EDZ56024.1| DNA polymerase I [Bacillus cereus H3081.97]
gi|217064111|gb|ACJ78361.1| DNA polymerase I [Bacillus cereus AH187]
gi|358355108|dbj|BAL20280.1| DNA polymerase I [Bacillus cereus NC7401]
gi|401085244|gb|EJP93487.1| DNA polymerase I [Bacillus cereus IS075]
gi|401203440|gb|EJR10279.1| DNA polymerase I [Bacillus cereus MSX-A12]
gi|401246501|gb|EJR52848.1| DNA polymerase I [Bacillus cereus VD102]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|118479734|ref|YP_896885.1| DNA polymerase I [Bacillus thuringiensis str. Al Hakam]
gi|229186842|ref|ZP_04313997.1| DNA polymerase I [Bacillus cereus BGSC 6E1]
gi|118418959|gb|ABK87378.1| DNA polymerase I [Bacillus thuringiensis str. Al Hakam]
gi|228596579|gb|EEK54244.1| DNA polymerase I [Bacillus cereus BGSC 6E1]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|47564997|ref|ZP_00236040.1| DNA polymerase I [Bacillus cereus G9241]
gi|47557783|gb|EAL16108.1| DNA polymerase I [Bacillus cereus G9241]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|393723094|ref|ZP_10343021.1| DNA polymerase I [Sphingomonas sp. PAMC 26605]
Length = 918
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E A K+ + P+Q DV++L+GD DN+PGV G+G A +LI + G L
Sbjct: 159 LGAEHVAEKFHGITPAQLGDVLALMGDSVDNVPGVPGVGPKTAAKLILEHGNL 211
>gi|384188661|ref|YP_005574557.1| DNA polymerase I [Bacillus thuringiensis serovar chinensis CT-43]
gi|410676983|ref|YP_006929354.1| DNA polymerase I [Bacillus thuringiensis Bt407]
gi|452201057|ref|YP_007481138.1| DNA polymerase I [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|326942370|gb|AEA18266.1| DNA polymerase I [Bacillus thuringiensis serovar chinensis CT-43]
gi|409176112|gb|AFV20417.1| DNA polymerase I [Bacillus thuringiensis Bt407]
gi|452106450|gb|AGG03390.1| DNA polymerase I [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|228910411|ref|ZP_04074226.1| DNA polymerase I [Bacillus thuringiensis IBL 200]
gi|228849177|gb|EEM94016.1| DNA polymerase I [Bacillus thuringiensis IBL 200]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|228967684|ref|ZP_04128704.1| DNA polymerase I [Bacillus thuringiensis serovar sotto str. T04001]
gi|228792017|gb|EEM39599.1| DNA polymerase I [Bacillus thuringiensis serovar sotto str. T04001]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|228941766|ref|ZP_04104313.1| DNA polymerase I [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228974690|ref|ZP_04135256.1| DNA polymerase I [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228981284|ref|ZP_04141584.1| DNA polymerase I [Bacillus thuringiensis Bt407]
gi|228778484|gb|EEM26751.1| DNA polymerase I [Bacillus thuringiensis Bt407]
gi|228785093|gb|EEM33106.1| DNA polymerase I [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228817978|gb|EEM64056.1| DNA polymerase I [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|229048294|ref|ZP_04193862.1| DNA polymerase I [Bacillus cereus AH676]
gi|228723019|gb|EEL74396.1| DNA polymerase I [Bacillus cereus AH676]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|229152782|ref|ZP_04280965.1| DNA polymerase I [Bacillus cereus m1550]
gi|228630602|gb|EEK87248.1| DNA polymerase I [Bacillus cereus m1550]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|218232627|ref|YP_002369383.1| DNA polymerase I [Bacillus cereus B4264]
gi|218160584|gb|ACK60576.1| DNA-directed DNA polymerase [Bacillus cereus B4264]
Length = 877
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|75762014|ref|ZP_00741928.1| DNA polymerase I [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228903104|ref|ZP_04067240.1| DNA polymerase I [Bacillus thuringiensis IBL 4222]
gi|74490500|gb|EAO53802.1| DNA polymerase I [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228856513|gb|EEN01037.1| DNA polymerase I [Bacillus thuringiensis IBL 4222]
Length = 891
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|119356373|ref|YP_911017.1| DNA polymerase I [Chlorobium phaeobacteroides DSM 266]
gi|119353722|gb|ABL64593.1| DNA polymerase I [Chlorobium phaeobacteroides DSM 266]
Length = 946
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+++ ++G ++P QF D ++L GD +DNIPG +GIG A LI K+G +
Sbjct: 188 LGIKEITIQFG-VRPEQFTDFLALAGDASDNIPGAKGIGPKTAASLIGKYGSI 239
>gi|418898327|ref|ZP_13452396.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC341D]
gi|377759784|gb|EHT83664.1| DNA polymerase I [Staphylococcus aureus subsp. aureus CIGC341D]
Length = 876
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|373494901|ref|ZP_09585497.1| hypothetical protein HMPREF0380_01135 [Eubacterium infirmum F0142]
gi|371967099|gb|EHO84573.1| hypothetical protein HMPREF0380_01135 [Eubacterium infirmum F0142]
Length = 884
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
EL P +F+D+ L+GDK+DNIPG+ G+G+ ++L+ +FG + V+ E+
Sbjct: 171 ELTPEEFIDLKGLMGDKSDNIPGIPGVGEKTGIKLLKQFGSIANMVQNVDEI 222
>gi|254469004|ref|ZP_05082410.1| DNA polymerase I [beta proteobacterium KB13]
gi|207087814|gb|EDZ65097.1| DNA polymerase I [beta proteobacterium KB13]
Length = 901
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E +K+G + P Q VD ++L+GDKADNIPGV+ +G AV+ + +FG L
Sbjct: 158 EGVLKKFG-VPPEQIVDYLTLIGDKADNIPGVDKVGPKTAVKWLNEFGDL 206
>gi|345017321|ref|YP_004819674.1| 5'-3' exonuclease [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032664|gb|AEM78390.1| LOW QUALITY PROTEIN: 5'-3' exonuclease, resolvase-like
domain-containing protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 872
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 6 MEDFARK----YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
ME+F K E+ P QF+D+ L+GDK+DNIPG+ IG+ A++L+ +FG
Sbjct: 156 MEEFDEKAVLERYEITPQQFIDLKGLMGDKSDNIPGIPNIGEKTAIKLLKEFG 208
>gi|229032231|ref|ZP_04188204.1| DNA polymerase I [Bacillus cereus AH1271]
gi|228729011|gb|EEL80014.1| DNA polymerase I [Bacillus cereus AH1271]
Length = 891
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|212695718|ref|ZP_03303846.1| hypothetical protein ANHYDRO_00238 [Anaerococcus hydrogenalis DSM
7454]
gi|212677391|gb|EEB36998.1| hypothetical protein ANHYDRO_00238 [Anaerococcus hydrogenalis DSM
7454]
Length = 681
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 13 YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
YG L P Q +DV L+GDK+DNIPGV+GIG+ A++ I K+G +
Sbjct: 169 YG-LSPKQLIDVKGLMGDKSDNIPGVDGIGEKTALKYIKKYGSM 211
>gi|196040840|ref|ZP_03108138.1| DNA-directed DNA polymerase [Bacillus cereus NVH0597-99]
gi|196028294|gb|EDX66903.1| DNA-directed DNA polymerase [Bacillus cereus NVH0597-99]
Length = 877
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|229158189|ref|ZP_04286256.1| DNA polymerase I [Bacillus cereus ATCC 4342]
gi|228625147|gb|EEK81907.1| DNA polymerase I [Bacillus cereus ATCC 4342]
Length = 891
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 177 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|254459249|ref|ZP_05072671.1| DNA polymerase I [Sulfurimonas gotlandica GD1]
gi|373868665|ref|ZP_09605063.1| DNA polymerase I [Sulfurimonas gotlandica GD1]
gi|207084142|gb|EDZ61432.1| DNA polymerase I [Sulfurimonas gotlandica GD1]
gi|372470766|gb|EHP30970.1| DNA polymerase I [Sulfurimonas gotlandica GD1]
Length = 905
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P QF+D S++GD ADN+PGV+GIG V A +L+ ++G L
Sbjct: 166 KYG-VTPKQFIDYQSILGDSADNVPGVKGIGKVGAEKLLVQYGDL 209
>gi|196047493|ref|ZP_03114704.1| DNA polymerase I [Bacillus cereus 03BB108]
gi|225866564|ref|YP_002751942.1| DNA polymerase I [Bacillus cereus 03BB102]
gi|376268515|ref|YP_005121227.1| DNA polymerase I [Bacillus cereus F837/76]
gi|196021708|gb|EDX60404.1| DNA polymerase I [Bacillus cereus 03BB108]
gi|225785727|gb|ACO25944.1| DNA-directed DNA polymerase [Bacillus cereus 03BB102]
gi|364514315|gb|AEW57714.1| DNA polymerase I [Bacillus cereus F837/76]
Length = 877
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|118444648|ref|YP_877757.1| DNA polymerase I [Clostridium novyi NT]
gi|118135104|gb|ABK62148.1| DNA polymerase I, polA [Clostridium novyi NT]
Length = 878
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+YG + P++F+DV L+GDK+DNIPGV GIG+ A++LI ++G +
Sbjct: 169 EYG-VTPTEFIDVKGLMGDKSDNIPGVPGIGNKTALKLIKEYGSI 212
>gi|27468285|ref|NP_764922.1| DNA polymerase I [Staphylococcus epidermidis ATCC 12228]
gi|27315831|gb|AAO04966.1|AE016748_200 DNA polymerase I [Staphylococcus epidermidis ATCC 12228]
Length = 903
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 192 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 235
>gi|407473451|ref|YP_006787851.1| DNA polymerase I [Clostridium acidurici 9a]
gi|407049959|gb|AFS78004.1| DNA polymerase I [Clostridium acidurici 9a]
Length = 889
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ ++ ++Y E+ P QF+D+ L+GDK+DNIPGV GIG+ V+L+ +F
Sbjct: 161 YDYDEVVKRY-EMTPKQFIDLKGLMGDKSDNIPGVPGIGEKTGVKLLKEF 209
>gi|390167984|ref|ZP_10219958.1| DNA polymerase I, partial [Sphingobium indicum B90A]
gi|389589411|gb|EIM67432.1| DNA polymerase I, partial [Sphingobium indicum B90A]
Length = 291
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G + K+G ++P Q DV++L+GD DN+PGV GIG A +LIT++G L +E
Sbjct: 162 GADYVMTKFG-VRPEQLGDVLALMGDSVDNVPGVPGIGPKTAAKLITEYGGLEAALEAAP 220
Query: 65 EM 66
M
Sbjct: 221 HM 222
>gi|148553374|ref|YP_001260956.1| DNA polymerase I [Sphingomonas wittichii RW1]
gi|148498564|gb|ABQ66818.1| DNA polymerase I [Sphingomonas wittichii RW1]
Length = 941
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E K+G ++P DV++L+GD DN+PGV GIG A QLI +FG L
Sbjct: 174 LGREHVLEKFG-VEPEALGDVLALMGDSVDNVPGVPGIGPKTASQLIQQFGTL 225
>gi|392940657|ref|ZP_10306301.1| LOW QUALITY PROTEIN: DNA polymerase I [Thermoanaerobacter
siderophilus SR4]
gi|392292407|gb|EIW00851.1| LOW QUALITY PROTEIN: DNA polymerase I [Thermoanaerobacter
siderophilus SR4]
Length = 872
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 6 MEDFARK----YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
ME+F K E+ P QF+D+ L+GDK+DNIPG+ IG+ A++L+ +FG
Sbjct: 156 MEEFDEKAVLERYEITPQQFIDLKGLMGDKSDNIPGIPNIGEKTAIKLLKEFG 208
>gi|373501409|ref|ZP_09591766.1| hypothetical protein HMPREF9140_01884 [Prevotella micans F0438]
gi|371949065|gb|EHO66939.1| hypothetical protein HMPREF9140_01884 [Prevotella micans F0438]
Length = 920
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 11 RKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+KYG +Q +D+++L+GD ADN PG G+G+ AV+LI +FG +
Sbjct: 166 KKYGIESTTQVIDLLALMGDSADNFPGCPGVGEKTAVKLIAQFGSI 211
>gi|336114638|ref|YP_004569405.1| DNA polymerase I [Bacillus coagulans 2-6]
gi|335368068|gb|AEH54019.1| DNA polymerase I [Bacillus coagulans 2-6]
Length = 888
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
M ++ KYG LKP Q +D+ L+GD +DNIPGV GIG+ A++L+ +F
Sbjct: 169 MEAYTPAHVEEKYG-LKPHQIIDMKGLMGDSSDNIPGVPGIGEKTAIKLLKQF 220
>gi|326391770|ref|ZP_08213290.1| DNA polymerase I [Thermoanaerobacter ethanolicus JW 200]
gi|325992186|gb|EGD50658.1| DNA polymerase I [Thermoanaerobacter ethanolicus JW 200]
Length = 872
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 6 MEDFARK----YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
ME+F K E+ P QF+D+ L+GDK+DNIPG+ IG+ A++L+ +FG
Sbjct: 156 MEEFDEKAVLERYEITPQQFIDLKGLMGDKSDNIPGIPNIGEKTAIKLLKEFG 208
>gi|157363023|ref|YP_001469790.1| DNA polymerase I [Thermotoga lettingae TMO]
gi|157313627|gb|ABV32726.1| DNA polymerase I [Thermotoga lettingae TMO]
Length = 892
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++PS+ VD+++L+GD DN+PGV+GIG A +LI KFG L
Sbjct: 173 VEPSKIVDLLALMGDSVDNVPGVKGIGMKTAAELIEKFGNL 213
>gi|386317853|ref|YP_006014017.1| DNA polymerase I [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
gi|417752115|ref|ZP_12400347.1| DNA-directed DNA polymerase [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|323128140|gb|ADX25437.1| DNA polymerase I [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
gi|333772109|gb|EGL48990.1| DNA-directed DNA polymerase [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 880
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ KFG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHKFGSL 219
>gi|228917225|ref|ZP_04080782.1| DNA polymerase I [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228842426|gb|EEM87517.1| DNA polymerase I [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 891
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPQQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|152976969|ref|YP_001376486.1| DNA polymerase I [Bacillus cytotoxicus NVH 391-98]
gi|152025721|gb|ABS23491.1| DNA polymerase I [Bacillus cytotoxicus NVH 391-98]
Length = 877
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-NLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|49481342|ref|YP_038632.1| DNA polymerase I [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|229093683|ref|ZP_04224782.1| DNA polymerase I [Bacillus cereus Rock3-42]
gi|49332898|gb|AAT63544.1| DNA polymerase I [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228689568|gb|EEL43376.1| DNA polymerase I [Bacillus cereus Rock3-42]
Length = 891
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|21909681|ref|NP_663949.1| DNA polymerase I [Streptococcus pyogenes MGAS315]
gi|28895061|ref|NP_801411.1| DNA polymerase I [Streptococcus pyogenes SSI-1]
gi|21903864|gb|AAM78752.1| DNA-directed DNA polymerase I [Streptococcus pyogenes MGAS315]
gi|28810306|dbj|BAC63244.1| putative putative DNA-directed DNA polymerase I [Streptococcus
pyogenes SSI-1]
Length = 880
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ KFG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHKFGSL 219
>gi|228929634|ref|ZP_04092652.1| DNA polymerase I [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228830021|gb|EEM75640.1| DNA polymerase I [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 891
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|30264657|ref|NP_847034.1| DNA polymerase I [Bacillus anthracis str. Ames]
gi|47778333|ref|YP_021476.2| DNA polymerase I [Bacillus anthracis str. 'Ames Ancestor']
gi|65321954|ref|ZP_00394913.1| COG0749: DNA polymerase I - 3'-5' exonuclease and polymerase
domains [Bacillus anthracis str. A2012]
gi|167633873|ref|ZP_02392196.1| DNA polymerase I [Bacillus anthracis str. A0442]
gi|167638243|ref|ZP_02396521.1| DNA polymerase I [Bacillus anthracis str. A0193]
gi|170685807|ref|ZP_02877030.1| DNA polymerase I [Bacillus anthracis str. A0465]
gi|170705559|ref|ZP_02896023.1| DNA polymerase I [Bacillus anthracis str. A0389]
gi|177651090|ref|ZP_02933921.1| DNA polymerase I [Bacillus anthracis str. A0174]
gi|190569033|ref|ZP_03021933.1| DNA polymerase I [Bacillus anthracis str. Tsiankovskii-I]
gi|196032762|ref|ZP_03100175.1| DNA polymerase I [Bacillus cereus W]
gi|218905814|ref|YP_002453648.1| DNA polymerase I [Bacillus cereus AH820]
gi|227817371|ref|YP_002817380.1| DNA polymerase I [Bacillus anthracis str. CDC 684]
gi|229603367|ref|YP_002868866.1| DNA polymerase I [Bacillus anthracis str. A0248]
gi|254687394|ref|ZP_05151250.1| DNA polymerase I [Bacillus anthracis str. CNEVA-9066]
gi|254724957|ref|ZP_05186740.1| DNA polymerase I [Bacillus anthracis str. A1055]
gi|254736694|ref|ZP_05194400.1| DNA polymerase I [Bacillus anthracis str. Western North America
USA6153]
gi|254741731|ref|ZP_05199418.1| DNA polymerase I [Bacillus anthracis str. Kruger B]
gi|254757503|ref|ZP_05209530.1| DNA polymerase I [Bacillus anthracis str. Australia 94]
gi|421509335|ref|ZP_15956242.1| DNA polymerase I [Bacillus anthracis str. UR-1]
gi|421639198|ref|ZP_16079791.1| DNA polymerase I [Bacillus anthracis str. BF1]
gi|30259332|gb|AAP28520.1| DNA-directed DNA polymerase [Bacillus anthracis str. Ames]
gi|47552038|gb|AAT33951.2| DNA polymerase I [Bacillus anthracis str. 'Ames Ancestor']
gi|167514060|gb|EDR89428.1| DNA polymerase I [Bacillus anthracis str. A0193]
gi|167530674|gb|EDR93376.1| DNA polymerase I [Bacillus anthracis str. A0442]
gi|170129684|gb|EDS98547.1| DNA polymerase I [Bacillus anthracis str. A0389]
gi|170670271|gb|EDT21011.1| DNA polymerase I [Bacillus anthracis str. A0465]
gi|172082916|gb|EDT67978.1| DNA polymerase I [Bacillus anthracis str. A0174]
gi|190559815|gb|EDV13800.1| DNA polymerase I [Bacillus anthracis str. Tsiankovskii-I]
gi|195994191|gb|EDX58146.1| DNA polymerase I [Bacillus cereus W]
gi|218539736|gb|ACK92134.1| DNA polymerase I [Bacillus cereus AH820]
gi|227005090|gb|ACP14833.1| DNA-directed DNA polymerase [Bacillus anthracis str. CDC 684]
gi|229267775|gb|ACQ49412.1| DNA polymerase I [Bacillus anthracis str. A0248]
gi|401820787|gb|EJT19950.1| DNA polymerase I [Bacillus anthracis str. UR-1]
gi|403393617|gb|EJY90860.1| DNA polymerase I [Bacillus anthracis str. BF1]
Length = 877
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|146319032|ref|YP_001198744.1| DNA polymerase I [Streptococcus suis 05ZYH33]
gi|146321240|ref|YP_001200951.1| DNA polymerase I [Streptococcus suis 98HAH33]
gi|253752097|ref|YP_003025238.1| DNA polymerase I [Streptococcus suis SC84]
gi|253753922|ref|YP_003027063.1| DNA polymerase I [Streptococcus suis P1/7]
gi|253755203|ref|YP_003028343.1| DNA polymerase I [Streptococcus suis BM407]
gi|386578217|ref|YP_006074623.1| DNA polymerase I [Streptococcus suis GZ1]
gi|386582296|ref|YP_006078700.1| DNA polymerase I [Streptococcus suis SS12]
gi|386588483|ref|YP_006084884.1| DNA polymerase I [Streptococcus suis A7]
gi|403061853|ref|YP_006650069.1| DNA polymerase I [Streptococcus suis S735]
gi|145689838|gb|ABP90344.1| DNA polymerase I - 3'-5' exonuclease and polymerase domain
[Streptococcus suis 05ZYH33]
gi|145692046|gb|ABP92551.1| DNA polymerase I - 3'-5' exonuclease and polymerase domain
[Streptococcus suis 98HAH33]
gi|251816386|emb|CAZ52017.1| DNA polymerase I [Streptococcus suis SC84]
gi|251817667|emb|CAZ55415.1| DNA polymerase I [Streptococcus suis BM407]
gi|251820168|emb|CAR46523.1| DNA polymerase I [Streptococcus suis P1/7]
gi|292558680|gb|ADE31681.1| DNA polymerase I [Streptococcus suis GZ1]
gi|353734442|gb|AER15452.1| DNA polymerase I [Streptococcus suis SS12]
gi|354985644|gb|AER44542.1| DNA polymerase I [Streptococcus suis A7]
gi|402809179|gb|AFR00671.1| DNA polymerase I [Streptococcus suis S735]
Length = 878
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+QF+D+ +L+GDK+DNIPGV IG+ ++L+T+FG L
Sbjct: 178 ISPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSL 218
>gi|116749047|ref|YP_845734.1| DNA polymerase I [Syntrophobacter fumaroxidans MPOB]
gi|116698111|gb|ABK17299.1| DNA polymerase I [Syntrophobacter fumaroxidans MPOB]
Length = 902
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+YG + P + VD ++LVGD +DN+PGV+GIGD A QL+ ++G L
Sbjct: 168 RYG-VPPGRMVDYLALVGDSSDNVPGVKGIGDKTARQLLQEWGSL 211
>gi|426402763|ref|YP_007021734.1| DNA polymerase I [Bdellovibrio bacteriovorus str. Tiberius]
gi|425859431|gb|AFY00467.1| DNA polymerase I [Bdellovibrio bacteriovorus str. Tiberius]
Length = 866
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ E K+G ++P QF+D +++VGD +DN+PGV+G+G+ A++L+ +F
Sbjct: 155 YNAEGVLEKWG-VRPDQFIDYLAIVGDTSDNVPGVKGVGEKGAIKLLEQF 203
>gi|405983611|ref|ZP_11041916.1| DNA polymerase I [Slackia piriformis YIT 12062]
gi|404388426|gb|EJZ83508.1| DNA polymerase I [Slackia piriformis YIT 12062]
Length = 878
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G + +YG + P+QF D + L GD +DNIPGV GIGD A +L+ FG +
Sbjct: 161 YGPAEVEERYG-VTPAQFPDFLGLKGDSSDNIPGVPGIGDKGAAKLLQNFGSI 212
>gi|49187477|ref|YP_030729.1| DNA polymerase I [Bacillus anthracis str. Sterne]
gi|228935894|ref|ZP_04098704.1| DNA polymerase I [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|229124153|ref|ZP_04253345.1| DNA polymerase I [Bacillus cereus 95/8201]
gi|386738483|ref|YP_006211664.1| DNA polymerase I [Bacillus anthracis str. H9401]
gi|49181404|gb|AAT56780.1| DNA polymerase I [Bacillus anthracis str. Sterne]
gi|228659455|gb|EEL15103.1| DNA polymerase I [Bacillus cereus 95/8201]
gi|228823662|gb|EEM69484.1| DNA polymerase I [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|384388335|gb|AFH85996.1| DNA polymerase I [Bacillus anthracis str. H9401]
Length = 891
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|228948311|ref|ZP_04110594.1| DNA polymerase I [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228811298|gb|EEM57636.1| DNA polymerase I [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 891
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 174 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|226310992|ref|YP_002770886.1| DNA polymerase I [Brevibacillus brevis NBRC 100599]
gi|226093940|dbj|BAH42382.1| DNA polymerase I [Brevibacillus brevis NBRC 100599]
Length = 882
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
E+ KYG LKP Q +D+ L+GD +DNIPGV G+G+ A++L+ ++G
Sbjct: 162 EEIHEKYG-LKPLQIIDLKGLMGDSSDNIPGVPGVGEKTALKLLHEYG 208
>gi|165869628|ref|ZP_02214286.1| DNA polymerase I [Bacillus anthracis str. A0488]
gi|254754671|ref|ZP_05206706.1| DNA polymerase I [Bacillus anthracis str. Vollum]
gi|164714457|gb|EDR19976.1| DNA polymerase I [Bacillus anthracis str. A0488]
Length = 877
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 160 YTKEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 211
>gi|52140922|ref|YP_085907.1| DNA polymerase I [Bacillus cereus E33L]
gi|51974391|gb|AAU15941.1| DNA polymerase I [Bacillus cereus E33L]
Length = 891
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+FG +
Sbjct: 177 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTV 225
>gi|91203357|emb|CAJ71010.1| stongly similair to DNA polymerase I [Candidatus Kuenenia
stuttgartiensis]
Length = 887
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+Q VDV++L GD +DNIPGV GIG+ A+ LI K+G L
Sbjct: 168 IMPNQVVDVLALAGDVSDNIPGVPGIGNKTALDLIKKWGSL 208
>gi|260060686|ref|YP_003193766.1| DNA polymerase I [Robiginitalea biformata HTCC2501]
gi|88784816|gb|EAR15985.1| putative DNA polymerase I [Robiginitalea biformata HTCC2501]
Length = 942
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+ + +++G +P Q +D + ++GD +DNIPG G+GD A + I +FG L
Sbjct: 164 WGIPEVQKRFGVERPEQVIDYLGMMGDASDNIPGFPGVGDKTAKKFIDQFGSL 216
>gi|336403556|ref|ZP_08584270.1| hypothetical protein HMPREF0127_01583 [Bacteroides sp. 1_1_30]
gi|335945669|gb|EGN07477.1| hypothetical protein HMPREF0127_01583 [Bacteroides sp. 1_1_30]
Length = 949
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI++FG +
Sbjct: 164 GVEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLISEFGSI 215
>gi|297583657|ref|YP_003699437.1| DNA polymerase I [Bacillus selenitireducens MLS10]
gi|297142114|gb|ADH98871.1| DNA polymerase I [Bacillus selenitireducens MLS10]
Length = 878
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
++ ++D +YG LKP Q +D+ L+GD +DNIPGV G+G+ A++L+ + G
Sbjct: 159 TYQVKDIDERYG-LKPEQIIDMKGLMGDSSDNIPGVPGVGEKTALKLLKEHG 209
>gi|262405632|ref|ZP_06082182.1| DNA polymerase I [Bacteroides sp. 2_1_22]
gi|294644423|ref|ZP_06722186.1| DNA-directed DNA polymerase [Bacteroides ovatus SD CC 2a]
gi|345510829|ref|ZP_08790389.1| hypothetical protein BSAG_04973 [Bacteroides sp. D1]
gi|262356507|gb|EEZ05597.1| DNA polymerase I [Bacteroides sp. 2_1_22]
gi|292640258|gb|EFF58513.1| DNA-directed DNA polymerase [Bacteroides ovatus SD CC 2a]
gi|345454316|gb|EGX26147.1| hypothetical protein BSAG_04973 [Bacteroides sp. D1]
Length = 949
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI++FG +
Sbjct: 164 GVEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLISEFGSI 215
>gi|257884459|ref|ZP_05664112.1| DNA polymerase A [Enterococcus faecium 1,231,501]
gi|431740030|ref|ZP_19528949.1| DNA polymerase I [Enterococcus faecium E2039]
gi|257820297|gb|EEV47445.1| DNA polymerase A [Enterococcus faecium 1,231,501]
gi|430604157|gb|ELB41657.1| DNA polymerase I [Enterococcus faecium E2039]
Length = 881
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLIPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|257898348|ref|ZP_05678001.1| DNA polymerase A [Enterococcus faecium Com15]
gi|257836260|gb|EEV61334.1| DNA polymerase A [Enterococcus faecium Com15]
Length = 881
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLIPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|298484257|ref|ZP_07002421.1| DNA polymerase type I [Bacteroides sp. D22]
gi|295085932|emb|CBK67455.1| DNA polymerase I [Bacteroides xylanisolvens XB1A]
gi|298269582|gb|EFI11179.1| DNA polymerase type I [Bacteroides sp. D22]
Length = 949
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI++FG +
Sbjct: 164 GVEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLISEFGSI 215
>gi|294810417|ref|ZP_06769074.1| 5'-3' exonuclease, SAM domain protein [Bacteroides xylanisolvens SD
CC 1b]
gi|294442382|gb|EFG11192.1| 5'-3' exonuclease, SAM domain protein [Bacteroides xylanisolvens SD
CC 1b]
Length = 614
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI++FG +
Sbjct: 164 GVEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLISEFGSI 215
>gi|88608724|ref|YP_506553.1| DNA polymerase I [Neorickettsia sennetsu str. Miyayama]
gi|88600893|gb|ABD46361.1| DNA polymerase I [Neorickettsia sennetsu str. Miyayama]
Length = 829
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G P+Q D +SLVGD +DNIPGV GIG A +L+ FG +
Sbjct: 155 GVNEVKEKFGVF-PTQMTDFLSLVGDTSDNIPGVPGIGVKTAAKLLNTFGAI 205
>gi|284047822|ref|YP_003398161.1| DNA polymerase I [Acidaminococcus fermentans DSM 20731]
gi|283952043|gb|ADB46846.1| DNA polymerase I [Acidaminococcus fermentans DSM 20731]
Length = 872
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+A + + F +Y L+P Q +D+ L+GD +DNIPGV G+G A++LIT++
Sbjct: 156 IAVYDEKAFGEEYQGLQPRQIIDLKGLMGDTSDNIPGVPGVGPKTALKLITEY 208
>gi|254797027|ref|YP_003081864.1| DNA polymerase I [Neorickettsia risticii str. Illinois]
gi|254590261|gb|ACT69623.1| DNA polymerase I [Neorickettsia risticii str. Illinois]
Length = 816
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G P+Q D +SLVGD +DNIPGV GIG A +L+ FG +
Sbjct: 155 GVNEVKEKFGVF-PTQMTDFLSLVGDTSDNIPGVPGIGVKTAAKLLNTFGAI 205
>gi|358063715|ref|ZP_09150319.1| hypothetical protein HMPREF9473_02382 [Clostridium hathewayi
WAL-18680]
gi|356698041|gb|EHI59597.1| hypothetical protein HMPREF9473_02382 [Clostridium hathewayi
WAL-18680]
Length = 891
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
ED R+Y ++ P++F+DV +L+GD +DNIPGV IG+ A LI +G
Sbjct: 164 EDVKREY-QVTPTEFIDVKALMGDASDNIPGVPSIGEKTATTLIVNYG 210
>gi|294013310|ref|YP_003546770.1| DNA polymerase I [Sphingobium japonicum UT26S]
gi|292676640|dbj|BAI98158.1| DNA polymerase I [Sphingobium japonicum UT26S]
Length = 928
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G + K+G ++P Q DV++L+GD DN+PGV GIG A +LIT++G L +E
Sbjct: 162 GADYVMTKFG-VRPEQLGDVLALMGDSVDNVPGVPGIGPKTAAKLITEYGGLEAALEAAP 220
Query: 65 EM 66
M
Sbjct: 221 RM 222
>gi|431756801|ref|ZP_19545433.1| DNA polymerase I [Enterococcus faecium E3083]
gi|430620655|gb|ELB57457.1| DNA polymerase I [Enterococcus faecium E3083]
Length = 881
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLIPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|431106077|ref|ZP_19497234.1| DNA polymerase I [Enterococcus faecium E1613]
gi|430569609|gb|ELB08599.1| DNA polymerase I [Enterococcus faecium E1613]
Length = 881
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLIPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|423214628|ref|ZP_17201156.1| DNA polymerase I [Bacteroides xylanisolvens CL03T12C04]
gi|392692534|gb|EIY85771.1| DNA polymerase I [Bacteroides xylanisolvens CL03T12C04]
Length = 960
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI++FG +
Sbjct: 175 GVEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLISEFGSI 226
>gi|296273188|ref|YP_003655819.1| DNA polymerase I [Arcobacter nitrofigilis DSM 7299]
gi|296097362|gb|ADG93312.1| DNA polymerase I [Arcobacter nitrofigilis DSM 7299]
Length = 900
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P+QF D SL+GD ADN+PGV+G+G A LI +FG L
Sbjct: 172 KYG-VHPNQFTDYQSLLGDSADNVPGVKGVGAKTAEALIKEFGTL 215
>gi|255693278|ref|ZP_05416953.1| DNA polymerase type I [Bacteroides finegoldii DSM 17565]
gi|260620957|gb|EEX43828.1| DNA-directed DNA polymerase [Bacteroides finegoldii DSM 17565]
Length = 930
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG GIG+ A +LI +FG +
Sbjct: 164 GVEEVKAKFDIKSPAQVIDMLGLMGDSSDNIPGCPGIGEKTAQKLIAEFGSI 215
>gi|406913569|gb|EKD52935.1| hypothetical protein ACD_61C00191G0001 [uncultured bacterium]
Length = 302
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
ED ++ L P Q +D+ SL+GD +DNIPGV+G+G V A +LI + G L
Sbjct: 164 EDKVKEVYGLSPRQIIDLKSLMGDASDNIPGVKGVGKVTATKLIQETGGL 213
>gi|330832426|ref|YP_004401251.1| DNA polymerase I [Streptococcus suis ST3]
gi|329306649|gb|AEB81065.1| DNA polymerase I [Streptococcus suis ST3]
Length = 878
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+QF+D+ +L+GDK+DNIPGV IG+ ++L+T+FG L
Sbjct: 178 ITPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSL 218
>gi|431762027|ref|ZP_19550589.1| DNA polymerase I [Enterococcus faecium E3548]
gi|430624719|gb|ELB61369.1| DNA polymerase I [Enterococcus faecium E3548]
Length = 881
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLIPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|420234840|ref|ZP_14739400.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH051475]
gi|394304083|gb|EJE47493.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH051475]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|417655920|ref|ZP_12305611.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU028]
gi|329737170|gb|EGG73424.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU028]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|417647302|ref|ZP_12297144.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU144]
gi|329724656|gb|EGG61162.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU144]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|340347219|ref|ZP_08670331.1| DNA-directed DNA polymerase I [Prevotella dentalis DSM 3688]
gi|433652418|ref|YP_007278797.1| DNA polymerase I [Prevotella dentalis DSM 3688]
gi|339609789|gb|EGQ14652.1| DNA-directed DNA polymerase I [Prevotella dentalis DSM 3688]
gi|433302951|gb|AGB28767.1| DNA polymerase I [Prevotella dentalis DSM 3688]
Length = 920
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ KYG +Q +D+++L+GD +DN PG G+G+ AV+LI +FG
Sbjct: 160 GEKEIQEKYGIASAAQVIDLLALMGDASDNYPGCPGVGEKTAVKLINQFG 209
>gi|227551619|ref|ZP_03981668.1| DNA-directed DNA polymerase [Enterococcus faecium TX1330]
gi|257887242|ref|ZP_05666895.1| DNA polymerase A [Enterococcus faecium 1,141,733]
gi|257895778|ref|ZP_05675431.1| DNA polymerase A [Enterococcus faecium Com12]
gi|293377607|ref|ZP_06623796.1| DNA-directed DNA polymerase [Enterococcus faecium PC4.1]
gi|431032969|ref|ZP_19490815.1| DNA polymerase I [Enterococcus faecium E1590]
gi|431737600|ref|ZP_19526553.1| DNA polymerase I [Enterococcus faecium E1972]
gi|431751985|ref|ZP_19540671.1| DNA polymerase I [Enterococcus faecium E2620]
gi|227179296|gb|EEI60268.1| DNA-directed DNA polymerase [Enterococcus faecium TX1330]
gi|257823296|gb|EEV50228.1| DNA polymerase A [Enterococcus faecium 1,141,733]
gi|257832343|gb|EEV58764.1| DNA polymerase A [Enterococcus faecium Com12]
gi|292643607|gb|EFF61728.1| DNA-directed DNA polymerase [Enterococcus faecium PC4.1]
gi|430564070|gb|ELB03254.1| DNA polymerase I [Enterococcus faecium E1590]
gi|430598687|gb|ELB36422.1| DNA polymerase I [Enterococcus faecium E1972]
gi|430614594|gb|ELB51574.1| DNA polymerase I [Enterococcus faecium E2620]
Length = 881
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLIPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|433443886|ref|ZP_20409009.1| DNA polymerase I [Anoxybacillus flavithermus TNO-09.006]
gi|432001860|gb|ELK22727.1| DNA polymerase I [Anoxybacillus flavithermus TNO-09.006]
Length = 875
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M + E KYG L P+Q VD+ L+GD +DNIPGV G+G+ A++L+ ++G +
Sbjct: 157 MERYTPEYVFEKYG-LTPAQIVDLKGLMGDASDNIPGVPGVGEKTALKLLKEYGTI 211
>gi|57867172|ref|YP_188827.1| DNA polymerase I [Staphylococcus epidermidis RP62A]
gi|251811085|ref|ZP_04825558.1| DNA polymerase I [Staphylococcus epidermidis BCM-HMP0060]
gi|282875888|ref|ZP_06284755.1| DNA-directed DNA polymerase [Staphylococcus epidermidis SK135]
gi|417914256|ref|ZP_12557908.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU109]
gi|418612487|ref|ZP_13175526.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU117]
gi|418625635|ref|ZP_13188279.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU126]
gi|420173208|ref|ZP_14679703.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM067]
gi|420183341|ref|ZP_14689473.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM049]
gi|421606827|ref|ZP_16048080.1| DNA polymerase I [Staphylococcus epidermidis AU12-03]
gi|57637830|gb|AAW54618.1| DNA polymerase I [Staphylococcus epidermidis RP62A]
gi|251805382|gb|EES58039.1| DNA polymerase I [Staphylococcus epidermidis BCM-HMP0060]
gi|281294913|gb|EFA87440.1| DNA-directed DNA polymerase [Staphylococcus epidermidis SK135]
gi|341652954|gb|EGS76728.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU109]
gi|374819045|gb|EHR83177.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU117]
gi|374835294|gb|EHR98911.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU126]
gi|394240386|gb|EJD85810.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM067]
gi|394249237|gb|EJD94455.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM049]
gi|406657500|gb|EKC83886.1| DNA polymerase I [Staphylococcus epidermidis AU12-03]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|293366362|ref|ZP_06613041.1| DNA-directed DNA polymerase I [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417660350|ref|ZP_12309936.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU045]
gi|417908733|ref|ZP_12552490.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU037]
gi|418607438|ref|ZP_13170673.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU057]
gi|418618301|ref|ZP_13181180.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU120]
gi|418624630|ref|ZP_13187302.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU125]
gi|418663603|ref|ZP_13225116.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU081]
gi|419769219|ref|ZP_14295315.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771327|ref|ZP_14297381.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-K]
gi|420165664|ref|ZP_14672355.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM088]
gi|420195343|ref|ZP_14701136.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM021]
gi|420196924|ref|ZP_14702658.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM020]
gi|420202282|ref|ZP_14707875.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM018]
gi|420214138|ref|ZP_14719418.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH05005]
gi|420216837|ref|ZP_14722031.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH05001]
gi|420221533|ref|ZP_14726462.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH08001]
gi|420227470|ref|ZP_14732238.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH05003]
gi|420229786|ref|ZP_14734489.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH04003]
gi|291319487|gb|EFE59854.1| DNA-directed DNA polymerase I [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733786|gb|EGG70112.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU045]
gi|341656094|gb|EGS79817.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU037]
gi|374404959|gb|EHQ75918.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU057]
gi|374411347|gb|EHQ82060.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU081]
gi|374816543|gb|EHR80747.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU120]
gi|374827082|gb|EHR90952.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU125]
gi|383358288|gb|EID35747.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-250]
gi|383361553|gb|EID38923.1| DNA-directed DNA polymerase [Staphylococcus aureus subsp. aureus
IS-K]
gi|394235465|gb|EJD81037.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM088]
gi|394263297|gb|EJE08033.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM021]
gi|394266898|gb|EJE11516.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM020]
gi|394269690|gb|EJE14220.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM018]
gi|394284060|gb|EJE28221.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH05005]
gi|394290433|gb|EJE34290.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH08001]
gi|394291199|gb|EJE35023.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH05001]
gi|394297094|gb|EJE40706.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH05003]
gi|394298863|gb|EJE42424.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH04003]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|298489723|ref|YP_003719900.1| DNA polymerase I ['Nostoc azollae' 0708]
gi|298231641|gb|ADI62777.1| DNA polymerase I ['Nostoc azollae' 0708]
Length = 982
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E K G L P+Q VD +L GDK+DNIPGV GIG+ AV+L+ + L
Sbjct: 185 ITEFQAEQVKEKLGVL-PTQIVDFKALCGDKSDNIPGVRGIGEKTAVKLLNTYNSL 239
>gi|418608890|ref|ZP_13172067.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU065]
gi|374409651|gb|EHQ80431.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU065]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418326054|ref|ZP_12937249.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU071]
gi|365226806|gb|EHM68020.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU071]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|386585743|ref|YP_006082145.1| DNA polymerase I [Streptococcus suis D12]
gi|353737889|gb|AER18897.1| DNA polymerase I [Streptococcus suis D12]
Length = 878
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+QF+D+ +L+GDK+DNIPGV IG+ ++L+T+FG L
Sbjct: 178 ITPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSL 218
>gi|223932667|ref|ZP_03624666.1| DNA polymerase I [Streptococcus suis 89/1591]
gi|302024099|ref|ZP_07249310.1| DNA polymerase I [Streptococcus suis 05HAS68]
gi|386583689|ref|YP_006080092.1| DNA polymerase I [Streptococcus suis D9]
gi|223898637|gb|EEF64999.1| DNA polymerase I [Streptococcus suis 89/1591]
gi|353735835|gb|AER16844.1| DNA polymerase I [Streptococcus suis D9]
Length = 878
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+QF+D+ +L+GDK+DNIPGV IG+ ++L+T+FG L
Sbjct: 178 ITPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSL 218
>gi|337283070|ref|YP_004622541.1| DNA-directed DNA polymerase I [Streptococcus parasanguinis ATCC
15912]
gi|335370663|gb|AEH56613.1| DNA-directed DNA polymerase I [Streptococcus parasanguinis ATCC
15912]
Length = 881
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
L P QF+D+ +L+GDK+DNIPGV IG+ ++L+ K+G L E EM
Sbjct: 179 LTPEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLKYGSLDGIYEHIDEM 229
>gi|420184646|ref|ZP_14690755.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM040]
gi|394257297|gb|EJE02219.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM040]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418575920|ref|ZP_13140067.1| DNA polymerase I [Staphylococcus saprophyticus subsp. saprophyticus
KACC 16562]
gi|379325668|gb|EHY92799.1| DNA polymerase I [Staphylococcus saprophyticus subsp. saprophyticus
KACC 16562]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML--VFN 59
E A KY L P+Q +D+ L+GD +DNIPGV G+G+ A++L+ +F + V+N
Sbjct: 162 EFIAEKYDGLVPNQIIDMKGLMGDASDNIPGVAGVGEKTAIKLLKQFSTVENVYN 216
>gi|417092589|ref|ZP_11957205.1| DNA polymerase I [Streptococcus suis R61]
gi|353532268|gb|EHC01940.1| DNA polymerase I [Streptococcus suis R61]
Length = 878
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+QF+D+ +L+GDK+DNIPGV IG+ ++L+T+FG L
Sbjct: 178 ITPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSL 218
>gi|417911425|ref|ZP_12555132.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU105]
gi|418622962|ref|ZP_13185692.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU123]
gi|418629327|ref|ZP_13191838.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU127]
gi|420209183|ref|ZP_14714621.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM003]
gi|420212230|ref|ZP_14717583.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM001]
gi|420220622|ref|ZP_14725581.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH04008]
gi|420232195|ref|ZP_14736836.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH051668]
gi|341653748|gb|EGS77515.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU105]
gi|374825163|gb|EHR89108.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU123]
gi|374834313|gb|EHR97963.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU127]
gi|394279411|gb|EJE23719.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM003]
gi|394280070|gb|EJE24361.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM001]
gi|394285975|gb|EJE30041.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH04008]
gi|394301518|gb|EJE44974.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIH051668]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418412087|ref|ZP_12985352.1| DNA polymerase I [Staphylococcus epidermidis BVS058A4]
gi|410890101|gb|EKS37901.1| DNA polymerase I [Staphylococcus epidermidis BVS058A4]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|420206001|ref|ZP_14711512.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM008]
gi|394278674|gb|EJE22988.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM008]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|420168588|ref|ZP_14675196.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM087]
gi|394233297|gb|EJD78905.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM087]
Length = 876
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|389856247|ref|YP_006358490.1| DNA polymerase I [Streptococcus suis ST1]
gi|353739965|gb|AER20972.1| DNA polymerase I [Streptococcus suis ST1]
Length = 878
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+QF+D+ +L+GDK+DNIPGV IG+ ++L+T+FG L
Sbjct: 178 ITPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSL 218
>gi|347532271|ref|YP_004839034.1| DNA polymerase I [Roseburia hominis A2-183]
gi|345502419|gb|AEN97102.1| DNA polymerase I [Roseburia hominis A2-183]
Length = 925
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ ++ KY ++ P++F+DV +L+GD +DNIPGV GIG+ A +I K+G +
Sbjct: 162 YNAKEVLEKY-QVTPTEFIDVKALMGDTSDNIPGVPGIGEKTATAIIAKYGSI 213
>gi|237720620|ref|ZP_04551101.1| DNA polymerase I [Bacteroides sp. 2_2_4]
gi|229450371|gb|EEO56162.1| DNA polymerase I [Bacteroides sp. 2_2_4]
Length = 949
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI++FG +
Sbjct: 164 GVEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLISEFGSI 215
>gi|350566879|ref|ZP_08935503.1| DNA-directed DNA polymerase I [Peptoniphilus indolicus ATCC 29427]
gi|348660750|gb|EGY77453.1| DNA-directed DNA polymerase I [Peptoniphilus indolicus ATCC 29427]
Length = 882
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+E YG L P QF+D+ L+GD +DNIPGV GIG+ ++LI +FG +
Sbjct: 161 VESLQEDYG-LTPDQFIDLKGLMGDSSDNIPGVPGIGEKTGLKLIHEFGTI 210
>gi|386580284|ref|YP_006076689.1| DNA polymerase I [Streptococcus suis JS14]
gi|319758476|gb|ADV70418.1| DNA polymerase I [Streptococcus suis JS14]
Length = 878
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+QF+D+ +L+GDK+DNIPGV IG+ ++L+T+FG L
Sbjct: 178 ITPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSL 218
>gi|319407881|emb|CBI81533.1| DNA polymerase I [Bartonella schoenbuchensis R1]
Length = 968
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + +D+ +LVGD DNIPGV GIG A QL+ +FG L
Sbjct: 167 GVSEVIEKWG-VAPEKMIDLQALVGDTTDNIPGVPGIGPKIAAQLLNQFGTL 217
>gi|220931331|ref|YP_002508239.1| DNA polymerase I [Halothermothrix orenii H 168]
gi|219992641|gb|ACL69244.1| DNA polymerase I [Halothermothrix orenii H 168]
Length = 870
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 11 RKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
R+ EL+P Q +D+ L+GD +DNIPGV GIG+ A++L+ +F L
Sbjct: 166 RERYELEPQQLIDMKGLMGDSSDNIPGVPGIGEKTAIKLLKEFSSL 211
>gi|418630965|ref|ZP_13193437.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU128]
gi|374836275|gb|EHR99863.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU128]
Length = 876
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYQGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418614281|ref|ZP_13177259.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU118]
gi|374820941|gb|EHR85015.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU118]
Length = 876
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYQGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|339319926|ref|YP_004679621.1| DNA polymerase I [Candidatus Midichloria mitochondrii IricVA]
gi|338226051|gb|AEI88935.1| DNA polymerase I [Candidatus Midichloria mitochondrii IricVA]
Length = 847
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
ED +K+G + P Q D ++L+GD +DNIPG+ GIG A L+ ++G L
Sbjct: 158 EDIEKKFG-IGPKQLTDALALIGDTSDNIPGIPGIGPKTAADLLKEYGSL 206
>gi|242242956|ref|ZP_04797401.1| DNA-directed DNA polymerase [Staphylococcus epidermidis W23144]
gi|420174555|ref|ZP_14681005.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM061]
gi|242233557|gb|EES35869.1| DNA-directed DNA polymerase [Staphylococcus epidermidis W23144]
gi|394245060|gb|EJD90387.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM061]
Length = 876
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYQGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|150390874|ref|YP_001320923.1| DNA polymerase I [Alkaliphilus metalliredigens QYMF]
gi|149950736|gb|ABR49264.1| DNA polymerase I [Alkaliphilus metalliredigens QYMF]
Length = 897
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+ P QF+D+ L+GD +DNIPG+ G+G+ A++L+ +FG +
Sbjct: 171 EVTPEQFIDLKGLMGDNSDNIPGIPGVGEKTAIKLLKQFGTV 212
>gi|418635090|ref|ZP_13197478.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU129]
gi|420204594|ref|ZP_14710152.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM015]
gi|374835848|gb|EHR99445.1| DNA-directed DNA polymerase [Staphylococcus epidermidis VCU129]
gi|394273604|gb|EJE18035.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM015]
Length = 876
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYQGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|418328127|ref|ZP_12939252.1| DNA-directed DNA polymerase [Staphylococcus epidermidis 14.1.R1.SE]
gi|365232305|gb|EHM73308.1| DNA-directed DNA polymerase [Staphylococcus epidermidis 14.1.R1.SE]
Length = 876
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYQGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|319950978|ref|ZP_08024849.1| DNA polymerase I [Dietzia cinnamea P4]
gi|319435360|gb|EFV90609.1| DNA polymerase I [Dietzia cinnamea P4]
Length = 899
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+A F E KYG + P+Q+ DV +L GD +DN+PGV +GD A + IT++G L
Sbjct: 155 LARFTPEAVEAKYG-VTPAQYPDVAALRGDSSDNLPGVPKVGDKTAAKWITQYGSL 209
>gi|339022112|ref|ZP_08646080.1| DNA polymerase I [Acetobacter tropicalis NBRC 101654]
gi|338750882|dbj|GAA09384.1| DNA polymerase I [Acetobacter tropicalis NBRC 101654]
Length = 950
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + +K+G L P + VDV +L+GD DN+PGV GIG A LI +FG L
Sbjct: 172 GLPEVEKKFGVL-PEKVVDVQALMGDSTDNVPGVPGIGPKTASALINEFGTL 222
>gi|288553689|ref|YP_003425624.1| DNA polymerase I [Bacillus pseudofirmus OF4]
gi|288544849|gb|ADC48732.1| DNA polymerase I [Bacillus pseudofirmus OF4]
Length = 875
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG +KP Q +D+ L+GD +DNIPGV G+G+ A++L+ +FG +
Sbjct: 167 KYG-IKPHQIIDMKGLMGDSSDNIPGVPGVGEKTALKLLKQFGTI 210
>gi|300775482|ref|ZP_07085343.1| DNA-directed DNA polymerase I [Chryseobacterium gleum ATCC 35910]
gi|300505509|gb|EFK36646.1| DNA-directed DNA polymerase I [Chryseobacterium gleum ATCC 35910]
Length = 944
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ KY P Q +D ++++GD DNIPG+EG+G+ A++ + +FG +
Sbjct: 166 LGVEEVKAKYEIEDPKQVIDFLAMMGDAVDNIPGLEGVGEKTAMKFLKEFGTI 218
>gi|404251763|ref|ZP_10955731.1| DNA polymerase I [Sphingomonas sp. PAMC 26621]
Length = 918
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E A K+ + P+Q DV++L+GD DN+PGV G+G A +LI + G L
Sbjct: 159 LGAEHVAEKFHGITPAQLGDVLALMGDSVDNVPGVPGVGPKTAAKLILEHGDL 211
>gi|395491278|ref|ZP_10422857.1| DNA polymerase I [Sphingomonas sp. PAMC 26617]
Length = 918
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E A K+ + P+Q DV++L+GD DN+PGV G+G A +LI + G L
Sbjct: 159 LGAEHVAEKFHGITPAQLGDVLALMGDSVDNVPGVPGVGPKTAAKLILEHGDL 211
>gi|390935243|ref|YP_006392748.1| DNA polymerase I [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570744|gb|AFK87149.1| DNA polymerase I [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 867
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
E+ P QF+D+ L+GDK+DNIPGV IG+ A++LI +FG
Sbjct: 169 EVTPLQFIDLKGLMGDKSDNIPGVPNIGEKTAIKLIKEFG 208
>gi|408491392|ref|YP_006867761.1| DNA polymerase I PolA [Psychroflexus torquis ATCC 700755]
gi|408468667|gb|AFU69011.1| DNA polymerase I PolA [Psychroflexus torquis ATCC 700755]
Length = 942
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+ + +K+G +P Q +D + ++GD ADNIPG+ G+G+ A + + +FG +
Sbjct: 164 WGIPEVQKKFGVERPEQVIDFLGMMGDAADNIPGLPGVGEKTAKKFLQQFGSM 216
>gi|42522378|ref|NP_967758.1| DNA polymerase I [Bdellovibrio bacteriovorus HD100]
gi|39574910|emb|CAE78751.1| DNA polymerase I [Bdellovibrio bacteriovorus HD100]
Length = 863
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ E K+G ++P QF+D +++VGD +DN+PGV+G+G+ A++L+ +F
Sbjct: 155 YNAEGVFEKWG-VRPDQFIDYLAIVGDASDNVPGVKGVGEKGAIKLLEQF 203
>gi|418603693|ref|ZP_13167074.1| putative DNA-directed DNA polymerase [Staphylococcus epidermidis
VCU041]
gi|374407011|gb|EHQ77880.1| putative DNA-directed DNA polymerase [Staphylococcus epidermidis
VCU041]
Length = 514
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 165 AEKYNGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|409359257|ref|ZP_11237608.1| DNA polymerase I [Dietzia alimentaria 72]
Length = 923
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+A F E KYG + P+Q+ DV +L GD +DN+PGV +GD A + IT++G L
Sbjct: 179 LARFTPEAVEAKYG-VTPTQYPDVAALRGDTSDNLPGVPKVGDKTAAKWITQYGSL 233
>gi|395783696|ref|ZP_10463545.1| DNA polymerase I [Bartonella melophagi K-2C]
gi|395425818|gb|EJF91978.1| DNA polymerase I [Bartonella melophagi K-2C]
Length = 968
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + +D+ +LVGD DNIPGV GIG A QL+ +FG L
Sbjct: 167 GVSEVIEKWG-VTPEKMIDLQALVGDPTDNIPGVPGIGPKIAAQLLNQFGTL 217
>gi|182417808|ref|ZP_02949122.1| DNA polymerase I [Clostridium butyricum 5521]
gi|237667599|ref|ZP_04527583.1| DNA polymerase I [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182378271|gb|EDT75803.1| DNA polymerase I [Clostridium butyricum 5521]
gi|237655947|gb|EEP53503.1| DNA polymerase I [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 956
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+YG +KP Q D+ SLVGDK+DNI GV G+G+ AV LI ++G +
Sbjct: 224 EYG-IKPEQVADLKSLVGDKSDNIKGVAGVGEASAVPLINEYGTV 267
>gi|420177989|ref|ZP_14684323.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM057]
gi|420181079|ref|ZP_14687285.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM053]
gi|394247176|gb|EJD92424.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM057]
gi|394247315|gb|EJD92561.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM053]
Length = 876
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYQGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|420192619|ref|ZP_14698477.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM023]
gi|394260792|gb|EJE05596.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM023]
Length = 876
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYQGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|121601792|ref|YP_988342.1| DNA polymerase I [Bartonella bacilliformis KC583]
gi|421760161|ref|ZP_16196982.1| DNA polymerase I [Bartonella bacilliformis INS]
gi|120613969|gb|ABM44570.1| DNA polymerase I [Bartonella bacilliformis KC583]
gi|411176633|gb|EKS46650.1| DNA polymerase I [Bartonella bacilliformis INS]
Length = 968
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G+ + K+G + P + VD+ +L GD DNIPG+ GIG A QL+ +FG L ++ S
Sbjct: 167 GVAEVVEKWG-VTPDKMVDLQALTGDPVDNIPGIPGIGPKTAAQLLNQFGSLDLLLQHVS 225
Query: 65 EM 66
E+
Sbjct: 226 EI 227
>gi|410456558|ref|ZP_11310418.1| DNA polymerase I [Bacillus bataviensis LMG 21833]
gi|409927942|gb|EKN65067.1| DNA polymerase I [Bacillus bataviensis LMG 21833]
Length = 878
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A KYG L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F L
Sbjct: 167 AEKYG-LTPEQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKEFSTL 212
>gi|381202279|ref|ZP_09909394.1| DNA polymerase I [Sphingobium yanoikuyae XLDN2-5]
Length = 932
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G L P Q DV++L+GD DN+PGV GIG A +LIT++G L
Sbjct: 170 KFGVL-PEQLGDVLALMGDSVDNVPGVPGIGPKTAAKLITEYGTL 213
>gi|333374341|ref|ZP_08466223.1| DNA-directed DNA polymerase I [Desmospora sp. 8437]
gi|332967876|gb|EGK06971.1| DNA-directed DNA polymerase I [Desmospora sp. 8437]
Length = 881
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ + KYG LKP Q +D+ L+GD +DNIPG+ G+G+ A++L+ ++G
Sbjct: 159 YDLHKIEEKYG-LKPEQIIDLKGLMGDPSDNIPGIPGVGEKTALKLLHQYG 208
>gi|418322541|ref|ZP_12933867.1| DNA-directed DNA polymerase [Staphylococcus pettenkoferi VCU012]
gi|365231523|gb|EHM72559.1| DNA-directed DNA polymerase [Staphylococcus pettenkoferi VCU012]
Length = 876
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY ++P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYNGIQPKQIIDMKGLMGDTSDNIPGVAGVGEKTALKLLNQF 208
>gi|427408412|ref|ZP_18898614.1| DNA polymerase I [Sphingobium yanoikuyae ATCC 51230]
gi|425712722|gb|EKU75736.1| DNA polymerase I [Sphingobium yanoikuyae ATCC 51230]
Length = 932
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G L P Q DV++L+GD DN+PGV GIG A +LIT++G L
Sbjct: 170 KFGVL-PEQLGDVLALMGDSVDNVPGVPGIGPKTAAKLITEYGTL 213
>gi|414341221|ref|YP_006982742.1| DNA polymerase I [Gluconobacter oxydans H24]
gi|411026556|gb|AFV99810.1| DNA polymerase I [Gluconobacter oxydans H24]
Length = 930
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G ++P Q VDV +L+GD DN+PGV GIG A QLI ++G L
Sbjct: 167 KFG-VRPDQVVDVQALMGDSTDNVPGVPGIGAKGAAQLINEYGTL 210
>gi|380693094|ref|ZP_09857953.1| DNA polymerase I [Bacteroides faecis MAJ27]
Length = 949
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 164 GIEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 215
>gi|453329342|dbj|GAC88534.1| DNA polymerase I [Gluconobacter thailandicus NBRC 3255]
Length = 929
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G ++P Q VDV +L+GD DN+PGV GIG A QLI ++G L
Sbjct: 167 KFG-VRPDQVVDVQALMGDSTDNVPGVPGIGAKGAAQLINEYGTL 210
>gi|410943843|ref|ZP_11375584.1| DNA polymerase I [Gluconobacter frateurii NBRC 101659]
Length = 930
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G ++P Q VDV +L+GD DN+PGV GIG A QLI ++G L
Sbjct: 167 KFG-VRPDQVVDVQALMGDSTDNVPGVPGIGAKGAAQLINEYGTL 210
>gi|420198836|ref|ZP_14704522.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM031]
gi|394273017|gb|EJE17460.1| DNA-directed DNA polymerase [Staphylococcus epidermidis NIHLM031]
Length = 876
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYQGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|425457350|ref|ZP_18837056.1| DNA polymerase I [Microcystis aeruginosa PCC 9807]
gi|389801306|emb|CCI19505.1| DNA polymerase I [Microcystis aeruginosa PCC 9807]
Length = 957
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F + K G +KP Q VD +L GDK+DNIPGV GIG+ A+ L+ K+ L
Sbjct: 179 FNSQAVTEKLG-VKPKQVVDFKALCGDKSDNIPGVRGIGEKTAIDLLKKYNNL 230
>gi|416125408|ref|ZP_11596006.1| DNA polymerase I [Staphylococcus epidermidis FRI909]
gi|319401005|gb|EFV89224.1| DNA polymerase I [Staphylococcus epidermidis FRI909]
Length = 876
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 162 EFIAEKYQGLVPKQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLNQF 208
>gi|78777442|ref|YP_393757.1| DNA polymerase I [Sulfurimonas denitrificans DSM 1251]
gi|78497982|gb|ABB44522.1| DNA polymerase A [Sulfurimonas denitrificans DSM 1251]
Length = 902
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 11 RKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+KYG + P QF+D S++GD ADNIPGV+GIG V A +L+ ++ L
Sbjct: 165 KKYG-ISPKQFIDYQSILGDSADNIPGVKGIGKVGAEKLLIEYETL 209
>gi|218247875|ref|YP_002373246.1| DNA polymerase I [Cyanothece sp. PCC 8801]
gi|257060804|ref|YP_003138692.1| DNA polymerase I [Cyanothece sp. PCC 8802]
gi|218168353|gb|ACK67090.1| DNA polymerase I [Cyanothece sp. PCC 8801]
gi|256590970|gb|ACV01857.1| DNA polymerase I [Cyanothece sp. PCC 8802]
Length = 972
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML--VFN 59
F E K G +KP Q VD +L GDK+D+IPG++GIG+ AV+L+ ++G + V+N
Sbjct: 177 FNSEAVEAKLG-IKPVQVVDYKALCGDKSDSIPGIDGIGEKTAVKLLKEYGTIQEVYN 233
>gi|325290277|ref|YP_004266458.1| DNA polymerase I [Syntrophobotulus glycolicus DSM 8271]
gi|324965678|gb|ADY56457.1| DNA polymerase I [Syntrophobotulus glycolicus DSM 8271]
Length = 905
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ + KY +LKP Q +D+ L+GD +DNIPG+ GIG+ A++L+ FG L
Sbjct: 159 YNKDKLFEKY-QLKPEQIIDLKGLMGDPSDNIPGIPGIGEKTALKLLWSFGSL 210
>gi|281417605|ref|ZP_06248625.1| DNA polymerase I [Clostridium thermocellum JW20]
gi|281409007|gb|EFB39265.1| DNA polymerase I [Clostridium thermocellum JW20]
Length = 894
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 13 YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
YG +KP QFVDV +L GD +DNIPGV GIG+ A+ LI ++ L
Sbjct: 173 YG-IKPEQFVDVKALAGDTSDNIPGVPGIGEKTALALIKEYNNL 215
>gi|355682862|ref|ZP_09062685.1| hypothetical protein HMPREF9469_05722 [Clostridium citroniae
WAL-17108]
gi|354810747|gb|EHE95385.1| hypothetical protein HMPREF9469_05722 [Clostridium citroniae
WAL-17108]
Length = 928
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
ED R+Y ++ P +F+DV +L+GD +DNIPGV IG+ A LI +G + C+S +
Sbjct: 164 EDVKREY-QVTPVEFIDVKALMGDASDNIPGVPSIGEKTATSLIAAYGSI---ENCYSHL 219
>gi|384228409|ref|YP_005620144.1| DNA polymerase I [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539342|gb|AEO08209.1| DNA polymerase I [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 289
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E+ KYG +KP F+D+++LVGD +DNIPG+ IG A+ L+ KF L
Sbjct: 164 ENIKDKYG-IKPKAFIDLLALVGDVSDNIPGIPKIGIKTALSLLNKFSNL 212
>gi|334345323|ref|YP_004553875.1| DNA polymerase I [Sphingobium chlorophenolicum L-1]
gi|334101945|gb|AEG49369.1| DNA polymerase I [Sphingobium chlorophenolicum L-1]
Length = 928
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G + K+G ++P Q DV++L+GD DN+PG+ GIG A +LIT++G L +E
Sbjct: 162 GADYVMNKFG-VQPEQLGDVLALMGDSVDNVPGIPGIGPKTAAKLITEYGGLEAALEAAP 220
Query: 65 EM 66
M
Sbjct: 221 SM 222
>gi|194333337|ref|YP_002015197.1| DNA polymerase I [Prosthecochloris aestuarii DSM 271]
gi|194311155|gb|ACF45550.1| DNA polymerase I [Prosthecochloris aestuarii DSM 271]
Length = 950
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG + + G + P QF+D+++L GD +DNIPG +GIG A +L+ +G L
Sbjct: 193 FGAAELKEELG-IAPDQFIDLLTLTGDSSDNIPGAKGIGPKTASKLLLSYGSL 244
>gi|125973403|ref|YP_001037313.1| DNA polymerase I [Clostridium thermocellum ATCC 27405]
gi|256004380|ref|ZP_05429361.1| DNA polymerase I [Clostridium thermocellum DSM 2360]
gi|385778683|ref|YP_005687848.1| DNA polymerase I [Clostridium thermocellum DSM 1313]
gi|419722963|ref|ZP_14250099.1| DNA polymerase I [Clostridium thermocellum AD2]
gi|419724689|ref|ZP_14251748.1| DNA polymerase I [Clostridium thermocellum YS]
gi|125713628|gb|ABN52120.1| DNA polymerase I [Clostridium thermocellum ATCC 27405]
gi|255991664|gb|EEU01765.1| DNA polymerase I [Clostridium thermocellum DSM 2360]
gi|316940363|gb|ADU74397.1| DNA polymerase I [Clostridium thermocellum DSM 1313]
gi|380771908|gb|EIC05769.1| DNA polymerase I [Clostridium thermocellum YS]
gi|380781020|gb|EIC10682.1| DNA polymerase I [Clostridium thermocellum AD2]
Length = 894
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 13 YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
YG +KP QFVDV +L GD +DNIPGV GIG+ A+ LI ++ L
Sbjct: 173 YG-IKPEQFVDVKALAGDTSDNIPGVPGIGEKTALALIKEYNNL 215
>gi|417002713|ref|ZP_11942017.1| DNA-directed DNA polymerase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479001|gb|EGC82102.1| DNA-directed DNA polymerase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 878
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ +E ++G L P Q +DV L GDK+DNIPGV+GIG +A+ I K+G +
Sbjct: 160 YTVETIKEEFG-LTPKQLIDVKGLEGDKSDNIPGVDGIGPKKAIGFIQKYGSI 211
>gi|392972350|ref|ZP_10337742.1| DNA polymerase I [Staphylococcus equorum subsp. equorum Mu2]
gi|392510063|emb|CCI61045.1| DNA polymerase I [Staphylococcus equorum subsp. equorum Mu2]
Length = 876
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVE 61
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F NVE
Sbjct: 162 EFIAEKYDGLVPEQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLKQFS----NVE 212
>gi|313673235|ref|YP_004051346.1| DNA polymerase i [Calditerrivibrio nitroreducens DSM 19672]
gi|312939991|gb|ADR19183.1| DNA polymerase I [Calditerrivibrio nitroreducens DSM 19672]
Length = 791
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G + P Q VD ++L GD +DN+PGV+GIG+ AV L+ +FG L
Sbjct: 158 KFG-IYPEQIVDFLALTGDSSDNVPGVKGIGEKTAVLLLNEFGTL 201
>gi|403046321|ref|ZP_10901792.1| DNA polymerase I [Staphylococcus sp. OJ82]
gi|402763821|gb|EJX17912.1| DNA polymerase I [Staphylococcus sp. OJ82]
Length = 876
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVE 61
E A KY L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F NVE
Sbjct: 162 EFIAEKYDGLVPEQIIDMKGLMGDTSDNIPGVAGVGEKTAIKLLKQFS----NVE 212
>gi|374339113|ref|YP_005095849.1| DNA polymerase I [Marinitoga piezophila KA3]
gi|372100647|gb|AEX84551.1| DNA polymerase I [Marinitoga piezophila KA3]
Length = 894
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ + +E +YG +P + D ++L GD ADNIPGV+GIG+ A +LI ++G L
Sbjct: 160 LIEYDIEKVKERYG-FEPKKIQDFLALTGDTADNIPGVKGIGEKTATKLIKEYGTL 214
>gi|357060797|ref|ZP_09121561.1| hypothetical protein HMPREF9332_01118 [Alloprevotella rava F0323]
gi|355375630|gb|EHG22913.1| hypothetical protein HMPREF9332_01118 [Alloprevotella rava F0323]
Length = 921
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ KYG P Q +D ++L+GD ADNIPG G+G A L+ +FG
Sbjct: 161 LGPQEVCEKYGLQSPLQVIDYLALMGDAADNIPGCPGVGPKTATTLLQQFG 211
>gi|397904016|ref|ZP_10504947.1| DNA polymerase I [Caloramator australicus RC3]
gi|343178762|emb|CCC57846.1| DNA polymerase I [Caloramator australicus RC3]
Length = 850
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+E+ +++G ++P +D+ +L+GD +DNIPGV GIG+ A++L+ ++G L
Sbjct: 160 YGVEEIKQRFG-IEPQNIIDLKALMGDASDNIPGVPGIGEKTALKLLHQYGNL 211
>gi|402837068|ref|ZP_10885599.1| DNA-directed DNA polymerase [Mogibacterium sp. CM50]
gi|402270084|gb|EJU19353.1| DNA-directed DNA polymerase [Mogibacterium sp. CM50]
Length = 868
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 1 MASFGMED----FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
M F M D F R L P QF+D+ L+GDK+DNIPGV GIG+ + + L+ ++G
Sbjct: 152 MTEFTMYDEEAIFERY--SLTPLQFIDLKGLMGDKSDNIPGVPGIGEKKGIALLKEYG 207
>gi|393785970|ref|ZP_10374114.1| DNA polymerase I [Bacteroides nordii CL02T12C05]
gi|392661084|gb|EIY54681.1| DNA polymerase I [Bacteroides nordii CL02T12C05]
Length = 935
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G+E K+ PSQ +D++ L+GD +DNIPG G+G+ A +LI +FG
Sbjct: 165 GIEQVKAKFDIQSPSQVIDMLGLMGDASDNIPGCPGVGEKTAQKLIAEFG 214
>gi|399889290|ref|ZP_10775167.1| DNA polymerase I [Clostridium arbusti SL206]
Length = 869
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
Query: 13 YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGM---LVFNVECFS 64
YG + P QF+DV L+GD +DNIPGV GIG+ A++LI ++G ++ N+E S
Sbjct: 168 YG-VTPKQFIDVKGLMGDSSDNIPGVPGIGEKTALKLIKEYGSVENVLMNIENLS 221
>gi|395778900|ref|ZP_10459411.1| DNA polymerase I [Bartonella elizabethae Re6043vi]
gi|395417075|gb|EJF83427.1| DNA polymerase I [Bartonella elizabethae Re6043vi]
Length = 969
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G+ + K+G + P + +D+ +L+GD +DN+PG+ GIG A QL+ +FG L ++ +
Sbjct: 167 GISEVIEKWG-VHPKKMIDLQALIGDSSDNVPGIPGIGPKTAAQLLNQFGSLDLLLQHVT 225
Query: 65 EM 66
E+
Sbjct: 226 EI 227
>gi|298387037|ref|ZP_06996591.1| DNA polymerase type I [Bacteroides sp. 1_1_14]
gi|298260187|gb|EFI03057.1| DNA polymerase type I [Bacteroides sp. 1_1_14]
Length = 949
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 164 GIEEVKAKFDIQSPAQVIDMLGLMGDASDNIPGCPGVGEKTAQKLIAEFGSI 215
>gi|451940050|ref|YP_007460688.1| DNA polymerase I [Bartonella australis Aust/NH1]
gi|451899437|gb|AGF73900.1| DNA polymerase I [Bartonella australis Aust/NH1]
Length = 969
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G+ + K+G + P + VD+ +L GD ADN+PG+ GIG A QL+ FG L +E +
Sbjct: 167 GVSEVIEKWG-VTPEKMVDLQALTGDSADNVPGIPGIGPKIAAQLLNHFGSLDLLLERVT 225
Query: 65 EM 66
E+
Sbjct: 226 EI 227
>gi|403511311|ref|YP_006642949.1| DNA polymerase I family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402802689|gb|AFR10099.1| DNA polymerase I family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 920
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVE 61
KYG + P ++ D+ +LVG+KADN+PGV G+G A + ITKFG L VE
Sbjct: 186 KYG-VPPERYRDLAALVGEKADNLPGVPGVGPKTAAKWITKFGSLEALVE 234
>gi|225388911|ref|ZP_03758635.1| hypothetical protein CLOSTASPAR_02651 [Clostridium asparagiforme
DSM 15981]
gi|225045020|gb|EEG55266.1| hypothetical protein CLOSTASPAR_02651 [Clostridium asparagiforme
DSM 15981]
Length = 711
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
ED R+Y ++ P++F+DV +L+GD +DNIPGV IG+ A +I+ +G +
Sbjct: 164 EDVKREY-QVTPAEFIDVKALMGDSSDNIPGVPSIGEKTATAIISAYGSI 212
>gi|29348669|ref|NP_812172.1| DNA polymerase I [Bacteroides thetaiotaomicron VPI-5482]
gi|29340574|gb|AAO78366.1| DNA polymerase I [Bacteroides thetaiotaomicron VPI-5482]
Length = 949
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 164 GIEEVKAKFDIQSPAQVIDMLGLMGDASDNIPGCPGVGEKTAQKLIAEFGSI 215
>gi|16800668|ref|NP_470936.1| DNA polymerase I [Listeria innocua Clip11262]
gi|16414087|emb|CAC96831.1| DNA polymerase I [Listeria innocua Clip11262]
Length = 875
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
E KY +L PSQ +D+ L+GD +DNIPG+ G+G+ A++L+ +FG V +V
Sbjct: 162 ETLKEKY-DLTPSQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESV 214
>gi|383124841|ref|ZP_09945502.1| DNA polymerase I [Bacteroides sp. 1_1_6]
gi|251841005|gb|EES69086.1| DNA polymerase I [Bacteroides sp. 1_1_6]
Length = 949
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 164 GIEEVKAKFDIQSPAQVIDMLGLMGDASDNIPGCPGVGEKTAQKLIAEFGSI 215
>gi|38146979|gb|AAR11874.1| DNA polymerase I [Thermoanaerobacterium sp. AZ3B.1]
Length = 833
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 6 MEDFARK----YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
ME+F K E+ P QF+D+ L+GDK+DNIPG+ IG+ A++L+ +FG
Sbjct: 117 MEEFDEKAVLERYEITPYQFIDLKGLMGDKSDNIPGIPNIGEKTAIKLLKEFG 169
>gi|117928295|ref|YP_872846.1| DNA polymerase I [Acidothermus cellulolyticus 11B]
gi|117648758|gb|ABK52860.1| DNA polymerase I [Acidothermus cellulolyticus 11B]
Length = 910
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 9/60 (15%)
Query: 5 GMEDFAR--------KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ D AR +YG L+P Q+ D +L GD +DN+PG+ GIG+ A +LI FG L
Sbjct: 174 GVSDLARMTPAAVEERYG-LRPEQYPDFAALRGDPSDNLPGIPGIGEKTAAKLIRDFGSL 232
>gi|167037882|ref|YP_001665460.1| DNA polymerase I [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116299|ref|YP_004186458.1| DNA polymerase I [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166856716|gb|ABY95124.1| DNA polymerase I [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929390|gb|ADV80075.1| DNA polymerase I [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 872
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 6 MEDFARK----YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
ME+F K E+ P QF+D+ L+GDK+DNIPG+ IG+ A++L+ FG +
Sbjct: 156 MEEFDEKAVLERYEITPHQFIDLKGLMGDKSDNIPGIPNIGEKTAIKLLKDFGTI 210
>gi|381205127|ref|ZP_09912198.1| DNA polymerase i [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 914
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G P Q ++V+ L+GD +DNIPGV+G+G+ A++LI +FG +
Sbjct: 167 KFG-CTPEQVIEVLGLMGDSSDNIPGVKGVGEKTAIKLIQEFGSI 210
>gi|373464490|ref|ZP_09556028.1| DNA-directed DNA polymerase [Lactobacillus kisonensis F0435]
gi|371762411|gb|EHO50942.1| DNA-directed DNA polymerase [Lactobacillus kisonensis F0435]
Length = 885
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
D+ K +KPSQ +++ L GD +DN PGVE +GD A++L+ +FG +
Sbjct: 168 DYVEKKLGVKPSQIIEIKGLKGDNSDNYPGVEKVGDKTALKLVQQFGTI 216
>gi|310658711|ref|YP_003936432.1| DNA polymerase I [[Clostridium] sticklandii]
gi|308825489|emb|CBH21527.1| DNA polymerase I [[Clostridium] sticklandii]
Length = 888
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ KY EL P QF+D+ L+GD++DNIPGV GIG+ ++L+ ++G +
Sbjct: 174 DKMTEKY-ELTPQQFIDLKGLMGDQSDNIPGVAGIGEKTGIKLLKEYGSI 222
>gi|160883388|ref|ZP_02064391.1| hypothetical protein BACOVA_01357 [Bacteroides ovatus ATCC 8483]
gi|423290815|ref|ZP_17269664.1| DNA polymerase I [Bacteroides ovatus CL02T12C04]
gi|156111108|gb|EDO12853.1| DNA-directed DNA polymerase [Bacteroides ovatus ATCC 8483]
gi|392664680|gb|EIY58217.1| DNA polymerase I [Bacteroides ovatus CL02T12C04]
Length = 949
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +L+++FG +
Sbjct: 164 GVEEVKAKFDIQSPTQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLVSEFGSI 215
>gi|189460222|ref|ZP_03009007.1| hypothetical protein BACCOP_00859 [Bacteroides coprocola DSM 17136]
gi|189433083|gb|EDV02068.1| DNA-directed DNA polymerase [Bacteroides coprocola DSM 17136]
Length = 954
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+ PSQ +D++ L+GD ADNIPG G+G+ A +LI +FG +
Sbjct: 193 GVNEIKAKFDIESPSQVIDMLGLMGDTADNIPGCPGVGEKTAQKLIAQFGSI 244
>gi|423293907|ref|ZP_17272034.1| DNA polymerase I [Bacteroides ovatus CL03T12C18]
gi|392677128|gb|EIY70547.1| DNA polymerase I [Bacteroides ovatus CL03T12C18]
Length = 949
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +L+++FG +
Sbjct: 164 GVEEVKAKFDIQSPTQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLVSEFGSI 215
>gi|423100647|ref|ZP_17088354.1| DNA-directed DNA polymerase [Listeria innocua ATCC 33091]
gi|370792871|gb|EHN60714.1| DNA-directed DNA polymerase [Listeria innocua ATCC 33091]
Length = 885
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
E KY +L PSQ +D+ L+GD +DNIPG+ G+G+ A++L+ +FG V +V
Sbjct: 172 ETLKEKY-DLTPSQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESV 224
>gi|383115770|ref|ZP_09936525.1| DNA polymerase I [Bacteroides sp. D2]
gi|313694828|gb|EFS31663.1| DNA polymerase I [Bacteroides sp. D2]
Length = 949
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +L+++FG +
Sbjct: 164 GVEEVKAKFDIQSPTQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLVSEFGSI 215
>gi|58040155|ref|YP_192119.1| DNA polymerase I [Gluconobacter oxydans 621H]
gi|58002569|gb|AAW61463.1| DNA polymerase I [Gluconobacter oxydans 621H]
Length = 944
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G ++P Q VDV +L+GD DN+PGV GIG A QL+ ++G L
Sbjct: 177 KFG-VRPDQVVDVQALMGDSTDNVPGVPGIGPKGAAQLVNEYGTL 220
>gi|56964474|ref|YP_176205.1| DNA polymerase I [Bacillus clausii KSM-K16]
gi|56910717|dbj|BAD65244.1| DNA-directed DNA polymerase I [Bacillus clausii KSM-K16]
Length = 877
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ E A +YG L+P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 159 YNREKVAERYG-LEPKQIIDLKGLMGDSSDNIPGVPGVGEKTALKLLAEF 207
>gi|392956932|ref|ZP_10322457.1| DNA polymerase I [Bacillus macauensis ZFHKF-1]
gi|391876834|gb|EIT85429.1| DNA polymerase I [Bacillus macauensis ZFHKF-1]
Length = 877
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P Q +D+ L+GD +DNIPGV G+G+ A++LI +FG L
Sbjct: 171 LTPQQIIDMKGLMGDASDNIPGVPGVGEKTAIKLIKQFGSL 211
>gi|298293825|ref|YP_003695764.1| DNA polymerase I [Starkeya novella DSM 506]
gi|296930336|gb|ADH91145.1| DNA polymerase I [Starkeya novella DSM 506]
Length = 981
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G+E+ K+G + P + VDV SL GD DN+PGV GIG A QL+ ++G L
Sbjct: 169 AIGVEEVFEKFG-VGPEKVVDVQSLAGDSVDNVPGVPGIGIKTAAQLLAEYGDL 221
>gi|320535266|ref|ZP_08035389.1| DNA-directed DNA polymerase [Treponema phagedenis F0421]
gi|320147876|gb|EFW39369.1| DNA-directed DNA polymerase [Treponema phagedenis F0421]
Length = 942
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+F +D ++G + P+Q +D +SL+GD ADN+PGV+ IG A +L+ ++G L
Sbjct: 161 AFNADDVKEQWG-VPPNQMLDFLSLIGDTADNVPGVKSIGPKTAAKLLDEYGSL 213
>gi|336413076|ref|ZP_08593429.1| hypothetical protein HMPREF1017_00537 [Bacteroides ovatus
3_8_47FAA]
gi|335943122|gb|EGN04964.1| hypothetical protein HMPREF1017_00537 [Bacteroides ovatus
3_8_47FAA]
Length = 960
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +L+++FG +
Sbjct: 175 GVEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLVSEFGSI 226
>gi|226322349|ref|ZP_03797867.1| hypothetical protein COPCOM_00110 [Coprococcus comes ATCC 27758]
gi|225209271|gb|EEG91625.1| DNA-directed DNA polymerase [Coprococcus comes ATCC 27758]
Length = 882
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
D KY ++ P++F+DV +L+GD +DNIPGV G+G+ A ++I ++G +
Sbjct: 174 DVKEKY-QVTPTEFIDVKALMGDTSDNIPGVPGVGEKTATKIIVEYGSI 221
>gi|237747176|ref|ZP_04577656.1| DNA polymerase I [Oxalobacter formigenes HOxBLS]
gi|229378527|gb|EEO28618.1| DNA polymerase I [Oxalobacter formigenes HOxBLS]
Length = 913
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E RK+G + P + VD +SLVGD +DNIPGV +G AV+ +T++G L
Sbjct: 159 EGVMRKFG-VPPDRIVDYLSLVGDTSDNIPGVNKVGPKTAVKWLTQYGSL 207
>gi|307564753|ref|ZP_07627281.1| DNA-directed DNA polymerase [Prevotella amnii CRIS 21A-A]
gi|307346475|gb|EFN91784.1| DNA-directed DNA polymerase [Prevotella amnii CRIS 21A-A]
Length = 945
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ KY K SQ +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 184 LGEKEIKEKYNIPKTSQVIDLLALMGDAADNFPGCPGVGEKTASKLINEFGSI 236
>gi|293368661|ref|ZP_06615268.1| DNA-directed DNA polymerase [Bacteroides ovatus SD CMC 3f]
gi|292636303|gb|EFF54788.1| DNA-directed DNA polymerase [Bacteroides ovatus SD CMC 3f]
Length = 949
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +L+++FG +
Sbjct: 164 GVEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLVSEFGSI 215
>gi|354580239|ref|ZP_08999144.1| DNA polymerase I [Paenibacillus lactis 154]
gi|353202670|gb|EHB68119.1| DNA polymerase I [Paenibacillus lactis 154]
Length = 885
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+G E +Y +L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +FG
Sbjct: 159 YGPEQIKERY-DLTPEQIIDLKGLMGDASDNIPGVPGVGEKTALKLLHEFG 208
>gi|325954851|ref|YP_004238511.1| DNA polymerase I [Weeksella virosa DSM 16922]
gi|323437469|gb|ADX67933.1| DNA polymerase I [Weeksella virosa DSM 16922]
Length = 941
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+E+ KY P Q +D++ ++GD DNIPG+ G+G+ A++ I +G L
Sbjct: 165 WGVEEVKEKYQIEDPIQVIDLLGMMGDSVDNIPGIPGVGEKTAIKFIKTYGSL 217
>gi|403385505|ref|ZP_10927562.1| 5'-3' exonuclease [Kurthia sp. JC30]
Length = 293
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
++ + F +YG + P QF DV + +GD +D PGV+GIG A+Q I K+G
Sbjct: 164 AYNLARFTEEYG-ISPQQFADVKAFMGDSSDGYPGVKGIGPKTALQFIQKYG 214
>gi|343520480|ref|ZP_08757449.1| DNA-directed DNA polymerase [Parvimonas sp. oral taxon 393 str.
F0440]
gi|343397438|gb|EGV09972.1| DNA-directed DNA polymerase [Parvimonas sp. oral taxon 393 str.
F0440]
Length = 837
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 5/51 (9%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+EDF L P Q +DV +L GD +DNIPGV+G+G+ A++LI ++G L
Sbjct: 126 LEDFG-----LSPKQLIDVKALQGDSSDNIPGVKGVGEKTALKLIQEYGSL 171
>gi|229828896|ref|ZP_04454965.1| hypothetical protein GCWU000342_00981 [Shuttleworthia satelles DSM
14600]
gi|229792059|gb|EEP28173.1| hypothetical protein GCWU000342_00981 [Shuttleworthia satelles DSM
14600]
Length = 910
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
S+ +D Y ++ P++F+DV +L GD ADNIPGV GIG+ A+ +I +G +
Sbjct: 163 SYYAKDVRETY-QVSPTEFIDVKALWGDTADNIPGVPGIGEKTAINIIAAYGSI 215
>gi|305665261|ref|YP_003861548.1| DNA polymerase I [Maribacter sp. HTCC2170]
gi|88710015|gb|EAR02247.1| DNA polymerase I [Maribacter sp. HTCC2170]
Length = 944
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+ + +++G +P Q +D + ++GD +DNIPG+ G+GD A + I ++G +
Sbjct: 164 WGIPEIQKRFGVERPEQVIDYLGMMGDASDNIPGLPGVGDKTAKKFINEYGSM 216
>gi|78045179|ref|YP_360471.1| DNA polymerase I [Carboxydothermus hydrogenoformans Z-2901]
gi|77997294|gb|ABB16193.1| DNA polymerase I [Carboxydothermus hydrogenoformans Z-2901]
Length = 831
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 13 YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
YG LKP Q VDV L+GD +DNIPGV GIG+ A+ LI +G
Sbjct: 168 YG-LKPKQLVDVKGLMGDPSDNIPGVPGIGEKTALDLIKTYG 208
>gi|336437052|ref|ZP_08616761.1| hypothetical protein HMPREF0988_02346 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336006186|gb|EGN36222.1| hypothetical protein HMPREF0988_02346 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 871
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
D K G + P++F+DV +L+GD +DNIPGV GIG+ A +LIT++
Sbjct: 166 DVKEKLG-VTPTEFIDVKALMGDTSDNIPGVPGIGEKTATKLITEY 210
>gi|333997453|ref|YP_004530065.1| DNA-directed DNA polymerase [Treponema primitia ZAS-2]
gi|333740823|gb|AEF86313.1| DNA-directed DNA polymerase [Treponema primitia ZAS-2]
Length = 1003
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+Q +D++SL+GD +DN+PGV+G+G+ AV+L+ ++ L
Sbjct: 203 VNPTQVLDLLSLIGDTSDNVPGVKGVGEKTAVKLMARYSSL 243
>gi|269120628|ref|YP_003308805.1| DNA polymerase I [Sebaldella termitidis ATCC 33386]
gi|268614506|gb|ACZ08874.1| DNA polymerase I [Sebaldella termitidis ATCC 33386]
Length = 885
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+Y ++P Q +D+ L+GDK+D IPG++GIG V+LI+K+G L
Sbjct: 170 EYLGVRPDQVIDLFGLMGDKSDGIPGIQGIGPKTGVELISKYGNL 214
>gi|212638359|ref|YP_002314879.1| DNA polymerase I [Anoxybacillus flavithermus WK1]
gi|212559839|gb|ACJ32894.1| DNA polymerase I [Anoxybacillus flavithermus WK1]
Length = 875
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L P+Q VD+ L+GD +DNIPGV G+G+ A++L+ ++G +
Sbjct: 168 KYG-LTPAQIVDLKGLMGDASDNIPGVPGVGEKTALKLLKEYGTV 211
>gi|94264033|ref|ZP_01287833.1| DNA polymerase A [delta proteobacterium MLMS-1]
gi|93455544|gb|EAT05731.1| DNA polymerase A [delta proteobacterium MLMS-1]
Length = 910
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KY +L P++ +D +L+GD +DNIPGV G+G AV+LI +FG L
Sbjct: 166 KY-QLPPAKLLDYFALIGDSSDNIPGVPGVGPKTAVKLIKEFGDL 209
>gi|438000056|ref|YP_007183789.1| DNA polymerase I [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451812985|ref|YP_007449438.1| DNA polymerase I [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429339290|gb|AFZ83712.1| DNA polymerase I [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451778954|gb|AGF49834.1| DNA polymerase I [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 901
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E ARK+G + P+ VD + L+GD DN+PGV+ IG AV+L+ K+G L
Sbjct: 160 EGVARKFG-IPPNLIVDYLMLIGDSVDNVPGVKKIGPKTAVKLLNKYGSL 208
>gi|293571803|ref|ZP_06682819.1| DNA polymerase I [Enterococcus faecium E980]
gi|291608057|gb|EFF37363.1| DNA polymerase I [Enterococcus faecium E980]
Length = 562
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ E A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPEHVAEKYDGLIPKQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKQYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|335047502|ref|ZP_08540523.1| DNA-directed DNA polymerase [Parvimonas sp. oral taxon 110 str.
F0139]
gi|333761310|gb|EGL38865.1| DNA-directed DNA polymerase [Parvimonas sp. oral taxon 110 str.
F0139]
Length = 875
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E +YG L P Q +DV +L GD +DNIPGV+G+G+ A++LI ++G L
Sbjct: 162 ESIFEEYG-LSPKQLIDVKALQGDSSDNIPGVKGVGEKTALKLIQEYGNL 210
>gi|429725874|ref|ZP_19260688.1| DNA-directed DNA polymerase [Prevotella sp. oral taxon 473 str.
F0040]
gi|429148466|gb|EKX91471.1| DNA-directed DNA polymerase [Prevotella sp. oral taxon 473 str.
F0040]
Length = 926
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P Q +D++ L+GD ADNIPG G+G AV+L+ FG +
Sbjct: 161 LGVEEVKTKFEVENPLQVIDLLGLMGDSADNIPGCPGVGAKTAVKLLADFGSI 213
>gi|332705531|ref|ZP_08425609.1| DNA polymerase I [Moorea producens 3L]
gi|332355891|gb|EGJ35353.1| DNA polymerase I [Moorea producens 3L]
Length = 996
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+G+E+ K G L PSQ VD +L GD +DNIPGV+GIG AV+L+ ++
Sbjct: 193 YGLEEVEAKLGVL-PSQVVDYKALCGDPSDNIPGVKGIGAKTAVKLLKEY 241
>gi|260437044|ref|ZP_05790860.1| DNA polymerase I [Butyrivibrio crossotus DSM 2876]
gi|292810353|gb|EFF69558.1| DNA polymerase I [Butyrivibrio crossotus DSM 2876]
Length = 873
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
ED KY PS+F+D+ +L+GD +DNIPGV GIG+ A+ +I+K+
Sbjct: 164 EDVMEKY-MATPSEFIDLKALMGDSSDNIPGVPGIGEKTAMSIISKY 209
>gi|374308315|ref|YP_005054746.1| DNA polymerase I [Filifactor alocis ATCC 35896]
gi|291166643|gb|EFE28689.1| DNA polymerase I (POL I) [Filifactor alocis ATCC 35896]
Length = 872
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
ED ++ EL P QF+D+ L+GD +DNIPGV GIG+ ++L+ ++
Sbjct: 161 EDKVKERYELTPKQFIDLKGLMGDSSDNIPGVAGIGEKTGIKLLKEY 207
>gi|294507650|ref|YP_003571708.1| DNA polymerase I [Salinibacter ruber M8]
gi|294343979|emb|CBH24757.1| DNA polymerase I [Salinibacter ruber M8]
Length = 949
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ F +YG L P+QFVD+++L+GD +DN+PGV GIG+ A +L+ ++
Sbjct: 197 DTFRDEYG-LDPAQFVDMLALMGDSSDNVPGVYGIGEKTAQKLLREY 242
>gi|51891986|ref|YP_074677.1| DNA polymerase I [Symbiobacterium thermophilum IAM 14863]
gi|51855675|dbj|BAD39833.1| DNA polymerase I [Symbiobacterium thermophilum IAM 14863]
Length = 874
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E +YG L PSQ +D+ +L+GD +DNIPGV G+G+ A++L+ +G +
Sbjct: 165 ETLKAEYG-LTPSQIIDLKALMGDASDNIPGVPGVGEKTALKLLADYGTV 213
>gi|304383743|ref|ZP_07366202.1| DNA-directed DNA polymerase I [Prevotella marshii DSM 16973]
gi|304335267|gb|EFM01538.1| DNA-directed DNA polymerase I [Prevotella marshii DSM 16973]
Length = 920
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G + KYG P +D+++L+GD +DN PG G+G+ AV+LI +FG +
Sbjct: 158 TMGEREVMEKYGISSPKLVIDLLALMGDASDNFPGCPGVGEKTAVKLINEFGTV 211
>gi|168333372|ref|ZP_02691652.1| DNA polymerase I [Epulopiscium sp. 'N.t. morphotype B']
Length = 865
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ S+ D KYG + P++ +DV +L+GD +DNIPGV+G+G+ A++LI ++
Sbjct: 157 IESYYAADVVAKYGVI-PTELIDVKALMGDASDNIPGVKGVGEKTALKLIAEY 208
>gi|333897428|ref|YP_004471302.1| DNA polymerase I [Thermoanaerobacterium xylanolyticum LX-11]
gi|38146977|gb|AAR11873.1| DNA polymerase I [Thermoanaerobacterium thermosulfurigenes]
gi|333112693|gb|AEF17630.1| DNA polymerase I [Thermoanaerobacterium xylanolyticum LX-11]
Length = 867
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
E+ P QF+D+ L+GDK+DNIPGV IG+ A++L+ +FG
Sbjct: 169 EVTPLQFIDLKGLMGDKSDNIPGVPNIGEKTAIKLVKEFG 208
>gi|294660324|ref|NP_853015.2| 5'-3' exonuclease [Mycoplasma gallisepticum str. R(low)]
gi|385325337|ref|YP_005879775.1| 5'-3' exonuclease [Mycoplasma gallisepticum str. R(high)]
gi|284811981|gb|AAP56583.2| 5'-3' exonuclease [Mycoplasma gallisepticum str. R(low)]
gi|284930493|gb|ADC30432.1| 5'-3' exonuclease [Mycoplasma gallisepticum str. R(high)]
Length = 288
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+F + +LKP + +LVGD +DNIPGV+GIG+ AVQLI +
Sbjct: 170 NFQEHFHDLKPEDVIQYKALVGDSSDNIPGVKGIGEKTAVQLIKDY 215
>gi|282879100|ref|ZP_06287860.1| DNA-directed DNA polymerase [Prevotella buccalis ATCC 35310]
gi|281298834|gb|EFA91243.1| DNA-directed DNA polymerase [Prevotella buccalis ATCC 35310]
Length = 920
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ KY P Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 158 TLGEKEICDKYNITTPLQVIDLLALMGDSADNFPGCPGVGEKTASKLINQFGSI 211
>gi|291520593|emb|CBK75814.1| DNA polymerase I [Butyrivibrio fibrisolvens 16/4]
Length = 901
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
D YG + P QF+DV +L GD +DNIPGVEGIG A + I ++G + EC + +
Sbjct: 165 DVKEAYG-VTPKQFIDVKALQGDSSDNIPGVEGIGPKTAEKWIAEYGSI---EECHAHV 219
>gi|163867312|ref|YP_001608506.1| DNA polymerase I [Bartonella tribocorum CIP 105476]
gi|161016953|emb|CAK00511.1| DNA polymerase I [Bartonella tribocorum CIP 105476]
Length = 968
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + +D+ +L+GD DN+PG+ GIG A QL+ +FG L
Sbjct: 167 GISEVIEKWG-VTPEKMIDLQALIGDSTDNVPGIPGIGPKTAAQLLNQFGSL 217
>gi|331701576|ref|YP_004398535.1| DNA polymerase I [Lactobacillus buchneri NRRL B-30929]
gi|329128919|gb|AEB73472.1| DNA polymerase I [Lactobacillus buchneri NRRL B-30929]
Length = 884
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 6 MEDFARKYGE----LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+E + K+ E +KPSQ +++ L GD +DN PGVE +GD AV+L+ +FG +
Sbjct: 162 LETYTPKHVEEKLGVKPSQIIEIKGLKGDNSDNYPGVEKVGDKTAVKLVQQFGTI 216
>gi|260910758|ref|ZP_05917412.1| DNA-directed DNA polymerase I [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635119|gb|EEX53155.1| DNA-directed DNA polymerase I [Prevotella sp. oral taxon 472 str.
F0295]
Length = 927
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ +KY P Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 158 TMGPDEVNQKYNISSPLQVIDLLALMGDSADNFPGCPGVGEKTASKLINEFGTV 211
>gi|401766127|ref|YP_006581133.1| 5'-3' exonuclease [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|401766883|ref|YP_006581888.1| 5'-3' exonuclease [Mycoplasma gallisepticum NC95_13295-2-2P]
gi|401767638|ref|YP_006582642.1| 5'-3' exonuclease [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|401768412|ref|YP_006583415.1| 5'-3' exonuclease [Mycoplasma gallisepticum NY01_2001.047-5-1P]
gi|401769164|ref|YP_006584166.1| 5'-3' exonuclease [Mycoplasma gallisepticum WI01_2001.043-13-2P]
gi|401769914|ref|YP_006584915.1| 5'-3' exonuclease [Mycoplasma gallisepticum NC06_2006.080-5-2P]
gi|401770657|ref|YP_006585657.1| 5'-3' exonuclease [Mycoplasma gallisepticum CA06_2006.052-5-2P]
gi|401771420|ref|YP_006586419.1| 5'-3' exonuclease [Mycoplasma gallisepticum NC08_2008.031-4-3P]
gi|400272389|gb|AFP75852.1| 5'-3' exonuclease [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|400273157|gb|AFP76619.1| 5'-3' exonuclease [Mycoplasma gallisepticum NC95_13295-2-2P]
gi|400273912|gb|AFP77373.1| 5'-3' exonuclease [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|400274684|gb|AFP78144.1| 5'-3' exonuclease [Mycoplasma gallisepticum NY01_2001.047-5-1P]
gi|400275445|gb|AFP78904.1| 5'-3' exonuclease [Mycoplasma gallisepticum WI01_2001.043-13-2P]
gi|400276192|gb|AFP79650.1| 5'-3' exonuclease [Mycoplasma gallisepticum NC06_2006.080-5-2P]
gi|400276937|gb|AFP80394.1| 5'-3' exonuclease [Mycoplasma gallisepticum CA06_2006.052-5-2P]
gi|400277701|gb|AFP81157.1| 5'-3' exonuclease [Mycoplasma gallisepticum NC08_2008.031-4-3P]
Length = 288
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+F + +LKP + +LVGD +DNIPGV+GIG+ AVQLI +
Sbjct: 170 NFQEHFHDLKPEDVIQYKALVGDSSDNIPGVKGIGEKTAVQLIKDY 215
>gi|392375299|ref|YP_003207132.1| DNA polymerase I [Candidatus Methylomirabilis oxyfera]
gi|258592992|emb|CBE69303.1| DNA polymerase I (POL I) [Candidatus Methylomirabilis oxyfera]
Length = 873
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+G + +++G + P Q V+V+ L+GD DNIPGV GIG+ A LI +FG
Sbjct: 157 YGESEVVKRFG-VPPGQVVEVMGLMGDPIDNIPGVHGIGEKTARNLIQQFG 206
>gi|385326438|ref|YP_005880875.1| 5'-3' exonuclease [Mycoplasma gallisepticum str. F]
gi|284931594|gb|ADC31532.1| 5'-3' exonuclease [Mycoplasma gallisepticum str. F]
Length = 288
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+F + +LKP + +LVGD +DNIPGV+GIG+ AVQLI +
Sbjct: 170 NFQEHFHDLKPEDVIQYKALVGDSSDNIPGVKGIGEKTAVQLIKDY 215
>gi|83814085|ref|YP_445755.1| DNA polymerase I [Salinibacter ruber DSM 13855]
gi|83755479|gb|ABC43592.1| DNA polymerase I [Salinibacter ruber DSM 13855]
Length = 926
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 7/56 (12%)
Query: 5 GMEDFARKYGE-------LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
G +DF K G+ L P+QFVD+++L+GD +DN+PGV GIG+ A +L+ ++
Sbjct: 164 GDQDFEIKTGDTFRDEYGLDPAQFVDMLALMGDSSDNVPGVYGIGEKTAQKLLREY 219
>gi|365171440|ref|ZP_09361201.1| DNA polymerase I [Synergistes sp. 3_1_syn1]
gi|363617725|gb|EHL69100.1| DNA polymerase I [Synergistes sp. 3_1_syn1]
Length = 849
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+F KYG +P D ++LVGD DNIPGV GIGD A +L+ ++G L
Sbjct: 165 NFKEKYG-FEPPLMADYLALVGDAVDNIPGVPGIGDKTAKELVGRYGSL 212
>gi|22536572|ref|NP_687423.1| DNA polymerase I [Streptococcus agalactiae 2603V/R]
gi|25010498|ref|NP_734893.1| DNA polymerase I [Streptococcus agalactiae NEM316]
gi|76786985|ref|YP_329109.1| DNA polymerase I [Streptococcus agalactiae A909]
gi|77406448|ref|ZP_00783505.1| DNA polymerase I [Streptococcus agalactiae H36B]
gi|77411656|ref|ZP_00787996.1| DNA polymerase I [Streptococcus agalactiae CJB111]
gi|406708910|ref|YP_006763636.1| DNA polymerase I [Streptococcus agalactiae GD201008-001]
gi|424050307|ref|ZP_17787854.1| DNA polymerase I [Streptococcus agalactiae ZQ0910]
gi|22533407|gb|AAM99295.1|AE014209_8 DNA polymerase I [Streptococcus agalactiae 2603V/R]
gi|23094851|emb|CAD46069.1| DNA polymerase I [Streptococcus agalactiae NEM316]
gi|76562042|gb|ABA44626.1| DNA polymerase I [Streptococcus agalactiae A909]
gi|77162300|gb|EAO73271.1| DNA polymerase I [Streptococcus agalactiae CJB111]
gi|77174950|gb|EAO77762.1| DNA polymerase I [Streptococcus agalactiae H36B]
gi|389648224|gb|EIM69735.1| DNA polymerase I [Streptococcus agalactiae ZQ0910]
gi|406649795|gb|AFS45196.1| DNA polymerase I [Streptococcus agalactiae GD201008-001]
Length = 880
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ PSQF+D+ +L+GDK+DNIPGV IG+ ++L++++G L
Sbjct: 179 ITPSQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLSEYGSL 219
>gi|339302165|ref|ZP_08651231.1| DNA-directed DNA polymerase I [Streptococcus agalactiae ATCC 13813]
gi|319744359|gb|EFV96719.1| DNA-directed DNA polymerase I [Streptococcus agalactiae ATCC 13813]
Length = 880
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ PSQF+D+ +L+GDK+DNIPGV IG+ ++L++++G L
Sbjct: 179 ITPSQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLSEYGSL 219
>gi|254456142|ref|ZP_05069571.1| DNA polymerase I [Candidatus Pelagibacter sp. HTCC7211]
gi|207083144|gb|EDZ60570.1| DNA polymerase I [Candidatus Pelagibacter sp. HTCC7211]
Length = 924
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
ED K+G + S+ +DV SL GD +DN+PGV GIG A +LI K+G L
Sbjct: 172 EDIINKFG-VDASKVIDVQSLAGDSSDNVPGVPGIGVKTAAELINKYGTL 220
>gi|77408763|ref|ZP_00785493.1| DNA polymerase I [Streptococcus agalactiae COH1]
gi|421147166|ref|ZP_15606858.1| DNA polymerase I [Streptococcus agalactiae GB00112]
gi|77172608|gb|EAO75747.1| DNA polymerase I [Streptococcus agalactiae COH1]
gi|401686177|gb|EJS82165.1| DNA polymerase I [Streptococcus agalactiae GB00112]
Length = 880
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ PSQF+D+ +L+GDK+DNIPGV IG+ ++L++++G L
Sbjct: 179 ITPSQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLSEYGSL 219
>gi|76798043|ref|ZP_00780300.1| DNA polymerase I [Streptococcus agalactiae 18RS21]
gi|76586602|gb|EAO63103.1| DNA polymerase I [Streptococcus agalactiae 18RS21]
Length = 811
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ PSQF+D+ +L+GDK+DNIPGV IG+ ++L++++G L
Sbjct: 179 ITPSQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLSEYGSL 219
>gi|417004515|ref|ZP_11943248.1| DNA polymerase I [Streptococcus agalactiae FSL S3-026]
gi|341578314|gb|EGS28711.1| DNA polymerase I [Streptococcus agalactiae FSL S3-026]
Length = 880
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ PSQF+D+ +L+GDK+DNIPGV IG+ ++L++++G L
Sbjct: 179 ITPSQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLSEYGSL 219
>gi|336397663|ref|ZP_08578463.1| DNA polymerase I [Prevotella multisaccharivorax DSM 17128]
gi|336067399|gb|EGN56033.1| DNA polymerase I [Prevotella multisaccharivorax DSM 17128]
Length = 935
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G +D KYG +D+++L+GD ADN PG G+G+ AV+LI +FG
Sbjct: 160 GEKDIEEKYGIPTADNVIDLLALMGDSADNYPGCPGVGEKTAVKLICEFG 209
>gi|408676937|ref|YP_006876764.1| DNA polymerase I [Streptomyces venezuelae ATCC 10712]
gi|328881266|emb|CCA54505.1| DNA polymerase I [Streptomyces venezuelae ATCC 10712]
Length = 335
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG ++P Q+ D +L GD +D +PGV+GIG+ A QLIT++G L
Sbjct: 209 KYG-VRPDQYADFAALRGDASDGLPGVKGIGEKTAAQLITEYGDL 252
>gi|288928711|ref|ZP_06422557.1| DNA polymerase type I [Prevotella sp. oral taxon 317 str. F0108]
gi|288329695|gb|EFC68280.1| DNA polymerase type I [Prevotella sp. oral taxon 317 str. F0108]
Length = 927
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ +KY P Q +D+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 158 TMGPDEVNQKYNISSPLQVIDLLALMGDSADNFPGCPGVGEKTASKLINEFGTV 211
>gi|403253516|ref|ZP_10919817.1| DNA polymerase I [Thermotoga sp. EMP]
gi|402811050|gb|EJX25538.1| DNA polymerase I [Thermotoga sp. EMP]
Length = 893
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ + KYG ++P Q D+++L GD+ DNIPGV GIG+ AVQL+ K+
Sbjct: 163 YDAQKVKEKYG-VEPQQIPDLLALTGDEIDNIPGVTGIGEKTAVQLLEKY 211
>gi|329769116|ref|ZP_08260537.1| hypothetical protein HMPREF0433_00301 [Gemella sanguinis M325]
gi|328839462|gb|EGF89039.1| hypothetical protein HMPREF0433_00301 [Gemella sanguinis M325]
Length = 879
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
KYG L P Q +D+ L+GDK+DNIPG+ G+G+ A++L+T++
Sbjct: 167 KYG-LTPQQIIDMKGLMGDKSDNIPGIPGVGEKTAIKLLTEY 207
>gi|198274096|ref|ZP_03206628.1| hypothetical protein BACPLE_00233 [Bacteroides plebeius DSM 17135]
gi|198273174|gb|EDY97443.1| DNA-directed DNA polymerase [Bacteroides plebeius DSM 17135]
Length = 931
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P Q +D++ L+GD ADNIPG G+G+ A +LI +FG +
Sbjct: 171 GVEEVKAKFDIQSPLQVIDMLGLMGDTADNIPGCPGVGEKTAQKLIAQFGSI 222
>gi|77413947|ref|ZP_00790121.1| DNA polymerase I [Streptococcus agalactiae 515]
gi|77159983|gb|EAO71120.1| DNA polymerase I [Streptococcus agalactiae 515]
Length = 880
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ PSQF+D+ +L+GDK+DNIPGV IG+ ++L++++G L
Sbjct: 179 ITPSQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLSEYGSL 219
>gi|373451725|ref|ZP_09543644.1| DNA polymerase I [Eubacterium sp. 3_1_31]
gi|371967946|gb|EHO85413.1| DNA polymerase I [Eubacterium sp. 3_1_31]
Length = 861
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 32/38 (84%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+KPSQ +D+ +L+GD ADNIPGV+GIG+ A++L+ ++
Sbjct: 171 IKPSQIIDLKALMGDSADNIPGVKGIGEKTALKLLKEY 208
>gi|440784791|ref|ZP_20961922.1| DNA polymerase I [Clostridium pasteurianum DSM 525]
gi|440218768|gb|ELP57986.1| DNA polymerase I [Clostridium pasteurianum DSM 525]
Length = 873
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 13 YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
YG + P QF+DV L+GD +DNIPGV GIG+ A++LI ++G +
Sbjct: 168 YG-VTPKQFIDVKGLMGDSSDNIPGVPGIGEKTALKLIKEYGSI 210
>gi|410594057|ref|YP_006950784.1| DNA polymerase [Streptococcus agalactiae SA20-06]
gi|410517696|gb|AFV71840.1| DNA polymerase [Streptococcus agalactiae SA20-06]
Length = 880
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ PSQF+D+ +L+GDK+DNIPGV IG+ ++L++++G L
Sbjct: 179 ITPSQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLSEYGSL 219
>gi|407796040|ref|ZP_11142996.1| DNA polymerase I [Salimicrobium sp. MJ3]
gi|407019394|gb|EKE32110.1| DNA polymerase I [Salimicrobium sp. MJ3]
Length = 876
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 9 FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F ++ E+ P Q + + +L+GD +DNIPGV G+G+ AV+L+ +FG L
Sbjct: 164 FLKEKMEIDPEQVIHLKALMGDSSDNIPGVPGVGEKTAVKLLKQFGTL 211
>gi|254391547|ref|ZP_05006747.1| DNA polymerase I [Streptomyces clavuligerus ATCC 27064]
gi|197705234|gb|EDY51046.1| DNA polymerase I [Streptomyces clavuligerus ATCC 27064]
Length = 905
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ F E KYG L PSQ+ D +L GD +DN+PG+ G+G+ A + I +FG V
Sbjct: 173 LTRFTPEKVQEKYG-LTPSQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELV 231
Query: 61 E 61
E
Sbjct: 232 E 232
>gi|423281298|ref|ZP_17260209.1| DNA polymerase I [Bacteroides fragilis HMW 610]
gi|404583206|gb|EKA87888.1| DNA polymerase I [Bacteroides fragilis HMW 610]
Length = 964
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 194 GIEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 245
>gi|421532935|ref|ZP_15979275.1| DNA polymerase I [Streptococcus agalactiae STIR-CD-17]
gi|403641762|gb|EJZ02688.1| DNA polymerase I [Streptococcus agalactiae STIR-CD-17]
Length = 880
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ PSQF+D+ +L+GDK+DNIPGV IG+ ++L++++G L
Sbjct: 179 ITPSQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLSEYGSL 219
>gi|421276499|ref|ZP_15727321.1| DNA polymerase [Streptococcus mitis SPAR10]
gi|395876975|gb|EJG88046.1| DNA polymerase [Streptococcus mitis SPAR10]
Length = 877
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+F E K G L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ ++G L
Sbjct: 164 AFTPEYLMEKMG-LTPAQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSL 216
>gi|359420852|ref|ZP_09212783.1| DNA polymerase I [Gordonia araii NBRC 100433]
gi|358243125|dbj|GAB10852.1| DNA polymerase I [Gordonia araii NBRC 100433]
Length = 930
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLV 57
+ F E+ +KYG L P Q+ D +L GD +DN+PG+ G+G+ A + I ++G LV
Sbjct: 191 LTRFTPEEVEKKYG-LTPQQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGSLV 246
>gi|57505393|ref|ZP_00371321.1| DNA polymerase I (polA) [Campylobacter upsaliensis RM3195]
gi|57016218|gb|EAL53004.1| DNA polymerase I (polA) [Campylobacter upsaliensis RM3195]
Length = 879
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
KYG +KPSQ D ++L GD ADNIPGV+GIG A L+ +FG
Sbjct: 164 KYG-VKPSQIKDFLALCGDSADNIPGVKGIGAKGAKNLLDEFG 205
>gi|294812030|ref|ZP_06770673.1| DNA polymerase I [Streptomyces clavuligerus ATCC 27064]
gi|294324629|gb|EFG06272.1| DNA polymerase I [Streptomyces clavuligerus ATCC 27064]
Length = 913
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ F E KYG L PSQ+ D +L GD +DN+PG+ G+G+ A + I +FG V
Sbjct: 181 LTRFTPEKVQEKYG-LTPSQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELV 239
Query: 61 E 61
E
Sbjct: 240 E 240
>gi|15644367|ref|NP_229419.1| DNA-directed DNA polymerase I [Thermotoga maritima MSB8]
gi|418045679|ref|ZP_12683774.1| DNA polymerase I [Thermotoga maritima MSB8]
gi|4982191|gb|AAD36686.1|AE001805_11 DNA-directed DNA polymerase I [Thermotoga maritima MSB8]
gi|351676564|gb|EHA59717.1| DNA polymerase I [Thermotoga maritima MSB8]
Length = 893
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ + KYG ++P Q D+++L GD+ DNIPGV GIG+ AVQL+ K+
Sbjct: 163 YDAQKVKEKYG-VEPQQIPDLLALTGDEIDNIPGVTGIGEKTAVQLLEKY 211
>gi|326440578|ref|ZP_08215312.1| DNA polymerase I [Streptomyces clavuligerus ATCC 27064]
Length = 884
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ F E KYG L PSQ+ D +L GD +DN+PG+ G+G+ A + I +FG V
Sbjct: 152 LTRFTPEKVQEKYG-LTPSQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELV 210
Query: 61 E 61
E
Sbjct: 211 E 211
>gi|189499514|ref|YP_001958984.1| DNA polymerase I [Chlorobium phaeobacteroides BS1]
gi|189494955|gb|ACE03503.1| DNA polymerase I [Chlorobium phaeobacteroides BS1]
Length = 936
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ + G ++ +++G + P F+D ++L GD +DNIPG +GIG A +L+T +G L
Sbjct: 186 LDTMGCDEVKKQFG-VPPECFIDFLTLTGDSSDNIPGAKGIGPKTASKLLTTYGTL 240
>gi|407781656|ref|ZP_11128873.1| DNA polymerase I [Oceanibaculum indicum P24]
gi|407207282|gb|EKE77219.1| DNA polymerase I [Oceanibaculum indicum P24]
Length = 938
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ K+G + P + VDV SL GD DN+PGV GIG A QLIT +G L
Sbjct: 174 GPDEVMEKFG-VAPDKVVDVQSLAGDSVDNVPGVPGIGVKTAAQLITDYGDL 224
>gi|389879068|ref|YP_006372633.1| DNA polymerase I [Tistrella mobilis KA081020-065]
gi|388529852|gb|AFK55049.1| DNA polymerase I [Tistrella mobilis KA081020-065]
Length = 938
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+G + P + VDV +L GD DN+PGV GIG A QLI ++G L
Sbjct: 164 GLEEVMAKFG-VAPDKVVDVQALAGDSTDNVPGVPGIGVKTAAQLIGEYGDL 214
>gi|357974770|ref|ZP_09138741.1| DNA polymerase I [Sphingomonas sp. KC8]
Length = 925
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ K+G + P Q DV++L+GD DN+PGV GIG A QLI ++G
Sbjct: 162 GRDEVIEKWG-VPPEQLGDVLALMGDSVDNVPGVPGIGPKTAAQLIQQYG 210
>gi|329940861|ref|ZP_08290141.1| DNA polymerase I [Streptomyces griseoaurantiacus M045]
gi|329300155|gb|EGG44053.1| DNA polymerase I [Streptomyces griseoaurantiacus M045]
Length = 906
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ F E KYG L PSQ+ D +L GD +DN+PG+ G+G+ A + I +FG V
Sbjct: 173 LTRFTPEKVLEKYG-LTPSQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELV 231
Query: 61 ECFSEM 66
E E+
Sbjct: 232 ERVEEV 237
>gi|315638941|ref|ZP_07894112.1| DNA-directed DNA polymerase I [Campylobacter upsaliensis JV21]
gi|315480970|gb|EFU71603.1| DNA-directed DNA polymerase I [Campylobacter upsaliensis JV21]
Length = 879
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
KYG +KPSQ D ++L GD ADNIPGV+GIG A L+ +FG
Sbjct: 164 KYG-VKPSQIKDFLALCGDSADNIPGVKGIGAKGAKNLLDEFG 205
>gi|265752656|ref|ZP_06088225.1| DNA polymerase I [Bacteroides sp. 3_1_33FAA]
gi|263235842|gb|EEZ21337.1| DNA polymerase I [Bacteroides sp. 3_1_33FAA]
Length = 971
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI ++G +
Sbjct: 161 GIEEVKAKFDIQSPAQIIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSI 212
>gi|237709129|ref|ZP_04539610.1| DNA polymerase I [Bacteroides sp. 9_1_42FAA]
gi|229456825|gb|EEO62546.1| DNA polymerase I [Bacteroides sp. 9_1_42FAA]
Length = 971
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI ++G +
Sbjct: 161 GIEEIKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSI 212
>gi|310687606|dbj|BAJ23222.1| DNA dependent DNA polymerase [Thermotoga petrophila]
Length = 893
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ + KYG ++P Q D+++L GD+ DNIPGV GIG+ AVQL+ K+
Sbjct: 163 YDAQKVKEKYG-VEPQQIPDLLALTGDEIDNIPGVTGIGEKTAVQLLEKY 211
>gi|293400879|ref|ZP_06645024.1| DNA polymerase I [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305905|gb|EFE47149.1| DNA polymerase I [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 865
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 32/38 (84%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+KPSQ +D+ +L+GD ADNIPGV+GIG+ A++L+ ++
Sbjct: 175 IKPSQIIDLKALMGDSADNIPGVKGIGEKTALKLLKEY 212
>gi|170289072|ref|YP_001739310.1| DNA polymerase I [Thermotoga sp. RQ2]
gi|170176575|gb|ACB09627.1| DNA polymerase I [Thermotoga sp. RQ2]
Length = 893
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ + KYG ++P Q D+++L GD+ DNIPGV GIG+ AVQL+ K+
Sbjct: 163 YDAQKVKEKYG-VEPQQIPDLLALTGDEIDNIPGVTGIGEKTAVQLLEKY 211
>gi|152990932|ref|YP_001356654.1| DNA polymerase I [Nitratiruptor sp. SB155-2]
gi|151422793|dbj|BAF70297.1| DNA polymerase I [Nitratiruptor sp. SB155-2]
Length = 888
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E +K+G + P D ++LVGD ADNIPGV+GIG AV+L+ +FG L
Sbjct: 159 EKATKKFG-IPPKLIKDYLALVGDSADNIPGVKGIGPKTAVKLLEQFGSL 207
>gi|395767572|ref|ZP_10448105.1| DNA polymerase I [Bartonella doshiae NCTC 12862]
gi|395413935|gb|EJF80388.1| DNA polymerase I [Bartonella doshiae NCTC 12862]
Length = 968
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G+++ K+G + P + +D+ +L GD DNIPG+ GIG A QL+ +FG L ++ S
Sbjct: 167 GVDEVVEKWG-VTPEKMIDLQALTGDSTDNIPGIPGIGPKIAAQLLDEFGTLDLLLQRVS 225
Query: 65 EM 66
E+
Sbjct: 226 EV 227
>gi|373857545|ref|ZP_09600286.1| DNA polymerase I [Bacillus sp. 1NLA3E]
gi|372452677|gb|EHP26147.1| DNA polymerase I [Bacillus sp. 1NLA3E]
Length = 877
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ S+ + KYG L P+Q +D+ L+GD++DNIPGV G+G+ A++L+ +F L
Sbjct: 157 IESYTPDHIREKYG-LSPNQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLKEFETL 211
>gi|336322733|ref|YP_004602700.1| DNA polymerase I [Flexistipes sinusarabici DSM 4947]
gi|336106314|gb|AEI14132.1| DNA polymerase I [Flexistipes sinusarabici DSM 4947]
Length = 793
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+++ K+ E+ P Q D ++LVGD +DNIPGV+GIG A L+ K+G L
Sbjct: 151 GVKEVVEKF-EVTPEQIPDFLALVGDASDNIPGVKGIGPKTAAPLLKKYGSL 201
>gi|302875558|ref|YP_003844191.1| DNA polymerase I [Clostridium cellulovorans 743B]
gi|307690087|ref|ZP_07632533.1| DNA polymerase I [Clostridium cellulovorans 743B]
gi|302578415|gb|ADL52427.1| DNA polymerase I [Clostridium cellulovorans 743B]
Length = 862
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 13 YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
YG + P+QF+DV L+GD +DNIPGV GIG+ A +LI ++G +
Sbjct: 168 YG-VTPTQFIDVKGLMGDASDNIPGVPGIGEKTAYKLIKEYGSI 210
>gi|153871900|ref|ZP_02000951.1| DNA-directed DNA polymerase [Beggiatoa sp. PS]
gi|152071634|gb|EDN69049.1| DNA-directed DNA polymerase [Beggiatoa sp. PS]
Length = 914
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+E K+G + P+ VD +SL+GDK+DNIPGV+ IG A++L+ +G L
Sbjct: 159 VEGVTEKFG-IPPALIVDYLSLIGDKSDNIPGVKTIGPKTAIKLLKNYGSL 208
>gi|163845937|ref|YP_001633981.1| DNA polymerase I [Chloroflexus aurantiacus J-10-fl]
gi|222523662|ref|YP_002568132.1| DNA polymerase I [Chloroflexus sp. Y-400-fl]
gi|6015002|sp|O08307.1|DPO1_CHLAA RecName: Full=DNA polymerase I; Short=POL I
gi|1913934|emb|CAA72997.1| DNA-directed DNA polymerase I [Chloroflexus aurantiacus J-10-fl]
gi|163667226|gb|ABY33592.1| DNA polymerase I [Chloroflexus aurantiacus J-10-fl]
gi|222447541|gb|ACM51807.1| DNA polymerase I [Chloroflexus sp. Y-400-fl]
Length = 942
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ +E ++Y L+P Q D+ L GD +DNIPGV GIG+ A+ L+ +F L
Sbjct: 164 YDLEQVRKRYDGLEPDQLADLRGLKGDTSDNIPGVRGIGEKGAIALLKQFRSL 216
>gi|424665766|ref|ZP_18102802.1| DNA polymerase I [Bacteroides fragilis HMW 616]
gi|404574019|gb|EKA78770.1| DNA polymerase I [Bacteroides fragilis HMW 616]
Length = 935
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 165 GIEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 216
>gi|395792664|ref|ZP_10472088.1| DNA polymerase I [Bartonella vinsonii subsp. arupensis Pm136co]
gi|395432221|gb|EJF98210.1| DNA polymerase I [Bartonella vinsonii subsp. arupensis Pm136co]
Length = 968
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G+ + K+G + P + VD+ +L+GD DN+PG+ GIG A QL+ +FG L ++ S
Sbjct: 167 GISEVIEKWG-VAPEKMVDLQALIGDPTDNVPGIPGIGPKIAAQLLDQFGTLDILLQRVS 225
Query: 65 EM 66
E+
Sbjct: 226 EV 227
>gi|423713326|ref|ZP_17687586.1| DNA polymerase I [Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395423367|gb|EJF89562.1| DNA polymerase I [Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 968
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G+ + K+G + P + VD+ +L+GD DN+PG+ GIG A QL+ +FG L ++ S
Sbjct: 167 GISEVIEKWG-VAPEKMVDLQALIGDPTDNVPGIPGIGPKIAAQLLDQFGTLDILLQRVS 225
Query: 65 EM 66
E+
Sbjct: 226 EV 227
>gi|359404893|ref|ZP_09197700.1| DNA-directed DNA polymerase [Prevotella stercorea DSM 18206]
gi|357559871|gb|EHJ41298.1| DNA-directed DNA polymerase [Prevotella stercorea DSM 18206]
Length = 878
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ KY P+Q +D+++L+GD ADN PG G+G A +LI +FG +
Sbjct: 158 TMGPKEVCEKYELHSPTQVIDLLALMGDSADNFPGCPGVGPKTATKLIAEFGSI 211
>gi|313148069|ref|ZP_07810262.1| DNA polymerase I [Bacteroides fragilis 3_1_12]
gi|313136836|gb|EFR54196.1| DNA polymerase I [Bacteroides fragilis 3_1_12]
Length = 941
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 171 GIEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 222
>gi|402298396|ref|ZP_10818091.1| DNA polymerase I [Bacillus alcalophilus ATCC 27647]
gi|401726369|gb|EJS99601.1| DNA polymerase I [Bacillus alcalophilus ATCC 27647]
Length = 877
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q +D+ L+GD +DNIPGV G+G+ A++L+ +FG +
Sbjct: 167 KYG-LEPKQIIDMKGLMGDSSDNIPGVPGVGEKTALKLLKEFGTI 210
>gi|384439822|ref|YP_005654546.1| DNA polymerase I, thermostable [Thermus sp. CCB_US3_UF1]
gi|359290955|gb|AEV16472.1| DNA polymerase I, thermostable [Thermus sp. CCB_US3_UF1]
Length = 833
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG L+P Q+VD +L GD +DN+PGV+GIG+ A +L+ ++G L
Sbjct: 171 KYG-LRPEQWVDYRALSGDPSDNLPGVKGIGEKTAAKLLQEWGSL 214
>gi|258645581|ref|ZP_05733050.1| DNA polymerase I [Dialister invisus DSM 15470]
gi|260402939|gb|EEW96486.1| DNA polymerase I [Dialister invisus DSM 15470]
Length = 858
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
MA+ E KYG + P Q +D+ +L+GD +DNIPGV G+G+ A +L++++ L
Sbjct: 155 MAAMTPEAVVEKYG-ITPRQVIDMKALMGDTSDNIPGVPGVGEKTAAKLLSQYQTL 209
>gi|427419337|ref|ZP_18909520.1| DNA polymerase I [Leptolyngbya sp. PCC 7375]
gi|425762050|gb|EKV02903.1| DNA polymerase I [Leptolyngbya sp. PCC 7375]
Length = 958
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITK 52
+G+++ K G +KP+Q +D +L GD +DNIPGV GIG AV+L+T+
Sbjct: 174 YGIKEVEEKLG-IKPNQVIDYKALCGDTSDNIPGVRGIGKKTAVKLLTE 221
>gi|414161038|ref|ZP_11417301.1| DNA polymerase I [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876717|gb|EKS24615.1| DNA polymerase I [Staphylococcus simulans ACS-120-V-Sch1]
Length = 876
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
A KY L P Q +D+ L+GD +DNIPG+ G+G+ A++L+ +F
Sbjct: 165 AEKYNGLTPLQIIDMKGLMGDSSDNIPGIAGVGEKTAIKLLNQF 208
>gi|406027128|ref|YP_006725960.1| DNA polymerase I [Lactobacillus buchneri CD034]
gi|405125617|gb|AFS00378.1| DNA polymerase I [Lactobacillus buchneri CD034]
Length = 884
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 6 MEDFARKYGE----LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+E + K+ E +KPSQ +++ L GD +DN PGVE +GD AV+L+ +FG +
Sbjct: 162 LETYTPKHVEEKLGVKPSQIIEIKGLKGDNSDNYPGVEKVGDKTAVRLVQQFGTI 216
>gi|398813590|ref|ZP_10572284.1| DNA polymerase I [Brevibacillus sp. BC25]
gi|398038396|gb|EJL31560.1| DNA polymerase I [Brevibacillus sp. BC25]
Length = 882
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
++ KYG LKP Q +D+ L+GD +DNIPGV G+G+ A++L+ ++G
Sbjct: 162 QEIHEKYG-LKPLQIIDLKGLMGDSSDNIPGVPGVGEKTALKLLHEYG 208
>gi|423714748|ref|ZP_17688972.1| DNA polymerase I [Bartonella elizabethae F9251]
gi|395430967|gb|EJF96995.1| DNA polymerase I [Bartonella elizabethae F9251]
Length = 969
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + +D+ +L+GD DN+PG+ GIG A QL+ +FG L
Sbjct: 167 GVSEVIEKWG-VHPKKMIDLQALIGDSTDNVPGIPGIGPKTAAQLLNQFGSL 217
>gi|406950195|gb|EKD80498.1| hypothetical protein ACD_40C00074G0006 [uncultured bacterium]
Length = 314
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G ++ KYG + P Q VD +LVGD +DNIPGV GIG A LI FG L
Sbjct: 159 YGPDEVFNKYG-VHPEQMVDYKALVGDVSDNIPGVVGIGPKGAANLIKMFGTL 210
>gi|348026628|ref|YP_004766433.1| DNA polymerase I [Megasphaera elsdenii DSM 20460]
gi|341822682|emb|CCC73606.1| DNA polymerase I [Megasphaera elsdenii DSM 20460]
Length = 858
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 31/37 (83%)
Query: 18 PSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
P+Q +D+ +L+GD ADNIPGV G+G+ A++LI++FG
Sbjct: 173 PAQVIDMKALMGDTADNIPGVPGVGEKTALKLISQFG 209
>gi|148270302|ref|YP_001244762.1| DNA polymerase I [Thermotoga petrophila RKU-1]
gi|147735846|gb|ABQ47186.1| DNA polymerase I [Thermotoga petrophila RKU-1]
Length = 893
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ + KYG ++P Q D+++L GD+ DNIPGV GIG+ AVQL+ K+
Sbjct: 163 YDAQKVKEKYG-VEPHQIPDLLALTGDEIDNIPGVTGIGEKTAVQLLEKY 211
>gi|15606735|ref|NP_214115.1| DNA polymerase I [Aquifex aeolicus VF5]
gi|17366200|sp|O67550.1|EX53_AQUAE RecName: Full=5'-3' exonuclease
gi|2983968|gb|AAC07515.1| DNA polymerase I 3'-5' exo domain [Aquifex aeolicus VF5]
Length = 289
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
F E +K+G ++P + D ++LVGDK DN+PG+EG+G A+ ++ K+G
Sbjct: 155 FTKERVIKKFG-VEPQKIPDYLALVGDKVDNVPGIEGVGPKTAINILKKYG 204
>gi|357590918|ref|ZP_09129584.1| DNA polymerase I [Corynebacterium nuruki S6-4]
Length = 908
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F E A KYG + P+Q+ D+ SL GD +DN+PGV G+G A + IT +G L
Sbjct: 175 FTPERVAEKYG-VTPTQYPDLASLRGDTSDNMPGVPGVGPKTAQKWITTYGSL 226
>gi|291563492|emb|CBL42308.1| DNA polymerase I [butyrate-producing bacterium SS3/4]
Length = 877
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
ED R+Y ++ P QF++V +L+GD++DNIPGV IG+ A LI ++
Sbjct: 164 EDVIREY-QVTPEQFIEVKALMGDQSDNIPGVPSIGEKTATNLIVQY 209
>gi|409124233|ref|ZP_11223628.1| DNA polymerase I [Gillisia sp. CBA3202]
Length = 917
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + +K+G +P Q +D + ++GD +DNIPG+ G+G+ A + + +FG +
Sbjct: 164 LGIPEVQKKFGVERPEQVIDFLGMMGDASDNIPGLPGVGEKTAKKFLAEFGSM 216
>gi|415884119|ref|ZP_11546148.1| DNA polymerase I [Bacillus methanolicus MGA3]
gi|387591914|gb|EIJ84231.1| DNA polymerase I [Bacillus methanolicus MGA3]
Length = 877
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
KYG L P Q +D+ L+GD +DNIPGV G+G+ A++L+T+F
Sbjct: 168 KYG-LTPEQIIDMKGLMGDASDNIPGVPGVGEKTAIKLLTEF 208
>gi|350271241|ref|YP_004882549.1| DNA polymerase I [Oscillibacter valericigenes Sjm18-20]
gi|348596083|dbj|BAL00044.1| DNA polymerase I [Oscillibacter valericigenes Sjm18-20]
Length = 884
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E F +YG P +D+ +L+GD +DNIPGV G+G+ A+ LI K+G +
Sbjct: 163 ESFREQYG-FDPIHMIDLKALMGDSSDNIPGVPGVGEKTAMDLIQKYGSI 211
>gi|423282583|ref|ZP_17261468.1| DNA polymerase I [Bacteroides fragilis HMW 615]
gi|404582151|gb|EKA86846.1| DNA polymerase I [Bacteroides fragilis HMW 615]
Length = 964
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 194 GVEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 245
>gi|336407634|ref|ZP_08588130.1| hypothetical protein HMPREF1018_00145 [Bacteroides sp. 2_1_56FAA]
gi|335944713|gb|EGN06530.1| hypothetical protein HMPREF1018_00145 [Bacteroides sp. 2_1_56FAA]
Length = 964
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 194 GVEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 245
>gi|386345979|ref|YP_006044228.1| DNA polymerase I [Spirochaeta thermophila DSM 6578]
gi|339410946|gb|AEJ60511.1| DNA polymerase I [Spirochaeta thermophila DSM 6578]
Length = 897
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E K+G ++ Q VD ++LVGD +DNIPGVEGIG+ A +L+ ++G L
Sbjct: 162 EGVKEKWG-VRADQIVDFLALVGDASDNIPGVEGIGEKTARRLLAEYGSL 210
>gi|167771297|ref|ZP_02443350.1| hypothetical protein ANACOL_02655 [Anaerotruncus colihominis DSM
17241]
gi|167666548|gb|EDS10678.1| DNA-directed DNA polymerase [Anaerotruncus colihominis DSM 17241]
Length = 874
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
KYG ++P+Q VDV +L+GD +DNIPGV GIG+ A+ LI ++
Sbjct: 174 KYG-VEPAQLVDVKALMGDASDNIPGVAGIGEKTALSLIGQY 214
>gi|307717956|ref|YP_003873488.1| DNA polymerase I [Spirochaeta thermophila DSM 6192]
gi|38146989|gb|AAR11879.1| DNA polymerase I [Spirochaeta thermophila DSM 6578]
gi|306531681|gb|ADN01215.1| DNA polymerase I [Spirochaeta thermophila DSM 6192]
Length = 897
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E K+G ++ Q VD ++LVGD +DNIPGVEGIG+ A +L+ ++G L
Sbjct: 162 EGVKEKWG-VRADQIVDFLALVGDASDNIPGVEGIGEKTAQRLLAEYGSL 210
>gi|404418666|ref|ZP_11000433.1| 5'-3' exonuclease [Staphylococcus arlettae CVD059]
gi|403489259|gb|EJY94837.1| 5'-3' exonuclease [Staphylococcus arlettae CVD059]
Length = 293
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ ++ F +YG L+P Q +DV + +GD AD PGV+GIG+ A++LI + G
Sbjct: 163 YTLDRFTDEYG-LQPKQLIDVKAFMGDTADGYPGVKGIGEKTAIKLIQQHG 212
>gi|120596878|ref|YP_961452.1| DNA polymerase I [Shewanella sp. W3-18-1]
gi|120556971|gb|ABM22898.1| DNA polymerase I [Shewanella sp. W3-18-1]
Length = 922
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ A KYG + P + +D ++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPDEVAAKYG-VGPDRIIDFLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|406988889|gb|EKE08741.1| hypothetical protein ACD_17C00017G0001, partial [uncultured
bacterium]
Length = 761
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 10 ARKYGEL---KPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A+K EL +P Q VD+++++GD +DNIPG+EG G A L+ +FG L
Sbjct: 41 AKKVEELYGVRPDQIVDLLAIMGDASDNIPGLEGFGPKTAATLLQEFGTL 90
>gi|423248112|ref|ZP_17229128.1| DNA polymerase I [Bacteroides fragilis CL03T00C08]
gi|423253061|ref|ZP_17233992.1| DNA polymerase I [Bacteroides fragilis CL03T12C07]
gi|392656961|gb|EIY50598.1| DNA polymerase I [Bacteroides fragilis CL03T12C07]
gi|392660532|gb|EIY54142.1| DNA polymerase I [Bacteroides fragilis CL03T00C08]
Length = 935
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 165 GVEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 216
>gi|386311837|ref|YP_006008002.1| DNA polymerase I [Shewanella putrefaciens 200]
gi|319424462|gb|ADV52536.1| DNA polymerase I [Shewanella putrefaciens 200]
Length = 922
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ A KYG + P + +D ++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPDEVAAKYG-VGPDRIIDFLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|146294987|ref|YP_001185411.1| DNA polymerase I [Shewanella putrefaciens CN-32]
gi|145566677|gb|ABP77612.1| DNA polymerase I [Shewanella putrefaciens CN-32]
Length = 922
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ A KYG + P + +D ++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPDEVAAKYG-VGPDRIIDFLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|359769905|ref|ZP_09273651.1| DNA polymerase I [Gordonia polyisoprenivorans NBRC 16320]
gi|359312708|dbj|GAB26484.1| DNA polymerase I [Gordonia polyisoprenivorans NBRC 16320]
Length = 930
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E+ +KYG L PSQ+ D +L GD +DN+PG+ G+G+ A + I ++G L
Sbjct: 193 LTRFTPEEVEKKYG-LTPSQYPDYAALRGDPSDNLPGIPGVGEKTASKWIREYGSL 247
>gi|288961988|ref|YP_003452298.1| DNA polymerase I [Azospirillum sp. B510]
gi|288914268|dbj|BAI75754.1| DNA polymerase I [Azospirillum sp. B510]
Length = 972
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ K+G + P + VDV +L GD DN+PGV GIG A QLIT++G L
Sbjct: 178 AIGPDEVFEKFG-VPPEKVVDVQALAGDSVDNVPGVPGIGVKTAAQLITEYGDL 230
>gi|281412608|ref|YP_003346687.1| DNA polymerase I [Thermotoga naphthophila RKU-10]
gi|281373711|gb|ADA67273.1| DNA polymerase I [Thermotoga naphthophila RKU-10]
Length = 893
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ + KYG ++P Q D+++L GD+ DNIPGV GIG+ AVQL+ K+
Sbjct: 163 YDAQKVKEKYG-VEPHQIPDLLALTGDEIDNIPGVTGIGEKTAVQLLEKY 211
>gi|60679700|ref|YP_209844.1| DNA polymerase I [Bacteroides fragilis NCTC 9343]
gi|375356484|ref|YP_005109255.1| putative DNA polymerase I [Bacteroides fragilis 638R]
gi|60491134|emb|CAH05882.1| putative DNA polymerase I [Bacteroides fragilis NCTC 9343]
gi|301161164|emb|CBW20702.1| putative DNA polymerase I [Bacteroides fragilis 638R]
Length = 941
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 171 GVEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 222
>gi|53711382|ref|YP_097374.1| DNA polymerase I [Bacteroides fragilis YCH46]
gi|383116450|ref|ZP_09937198.1| DNA polymerase I [Bacteroides sp. 3_2_5]
gi|423259554|ref|ZP_17240477.1| DNA polymerase I [Bacteroides fragilis CL07T00C01]
gi|423263472|ref|ZP_17242475.1| DNA polymerase I [Bacteroides fragilis CL07T12C05]
gi|52214247|dbj|BAD46840.1| DNA polymerase I [Bacteroides fragilis YCH46]
gi|382973754|gb|EES88569.2| DNA polymerase I [Bacteroides sp. 3_2_5]
gi|387777134|gb|EIK39234.1| DNA polymerase I [Bacteroides fragilis CL07T00C01]
gi|392706894|gb|EIZ00014.1| DNA polymerase I [Bacteroides fragilis CL07T12C05]
Length = 935
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 165 GVEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 216
>gi|423270007|ref|ZP_17248979.1| DNA polymerase I [Bacteroides fragilis CL05T00C42]
gi|423272538|ref|ZP_17251485.1| DNA polymerase I [Bacteroides fragilis CL05T12C13]
gi|392700049|gb|EIY93217.1| DNA polymerase I [Bacteroides fragilis CL05T00C42]
gi|392708804|gb|EIZ01908.1| DNA polymerase I [Bacteroides fragilis CL05T12C13]
Length = 935
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 165 GVEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 216
>gi|299145218|ref|ZP_07038286.1| DNA polymerase type I [Bacteroides sp. 3_1_23]
gi|298515709|gb|EFI39590.1| DNA polymerase type I [Bacteroides sp. 3_1_23]
Length = 949
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P Q +D++ L+GD +DNIPG G+G+ A +LI++FG +
Sbjct: 164 GVEEVKAKFDIQSPVQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLISEFGSI 215
>gi|265764828|ref|ZP_06093103.1| DNA polymerase I [Bacteroides sp. 2_1_16]
gi|263254212|gb|EEZ25646.1| DNA polymerase I [Bacteroides sp. 2_1_16]
Length = 941
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 171 GVEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 222
>gi|378718147|ref|YP_005283036.1| DNA polymerase I [Gordonia polyisoprenivorans VH2]
gi|375752850|gb|AFA73670.1| DNA polymerase I [Gordonia polyisoprenivorans VH2]
Length = 930
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E+ +KYG L PSQ+ D +L GD +DN+PG+ G+G+ A + I ++G L
Sbjct: 193 LTRFTPEEVEKKYG-LTPSQYPDYAALRGDPSDNLPGIPGVGEKTASKWIREYGSL 247
>gi|357041237|ref|ZP_09103016.1| DNA polymerase I [Desulfotomaculum gibsoniae DSM 7213]
gi|355355574|gb|EHG03384.1| DNA polymerase I [Desulfotomaculum gibsoniae DSM 7213]
Length = 882
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+YG + P+Q +D+ L+GD +DNIPGV GIG+ A++LI + G L
Sbjct: 169 RYG-VSPTQIIDIKGLMGDTSDNIPGVPGIGEKTALKLIQEHGTL 212
>gi|417928676|ref|ZP_12572064.1| DNA-directed DNA polymerase [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340766550|gb|EGR89076.1| DNA-directed DNA polymerase [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
Length = 905
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 204 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 244
>gi|408402494|ref|YP_006860458.1| DNA polymerase I [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|283131335|dbj|BAI63340.1| DNA polymerase I [Streptococcus dysgalactiae subsp. equisimilis]
gi|407968723|dbj|BAM61961.1| DNA polymerase I [Streptococcus dysgalactiae subsp. equisimilis
RE378]
Length = 924
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 223 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 263
>gi|449109294|ref|ZP_21745930.1| DNA polymerase I [Treponema denticola ATCC 33520]
gi|448959102|gb|EMB39824.1| DNA polymerase I [Treponema denticola ATCC 33520]
Length = 943
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG E+ ++G + P+ +D++SL+GD ADN+PG++G+G AV+L+ ++ L
Sbjct: 161 FGAENVKEEWG-VYPAGMLDLLSLIGDSADNVPGIKGVGPKTAVKLLEEYKTL 212
>gi|126172309|ref|YP_001048458.1| DNA polymerase I [Shewanella baltica OS155]
gi|386338986|ref|YP_006035352.1| DNA polymerase I [Shewanella baltica OS117]
gi|125995514|gb|ABN59589.1| DNA polymerase I [Shewanella baltica OS155]
gi|334861387|gb|AEH11858.1| DNA polymerase I [Shewanella baltica OS117]
Length = 921
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G E+ A K+G + P + +D+++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPEEVAIKFG-VGPDRIIDLLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|50913551|ref|YP_059523.1| DNA polymerase I [Streptococcus pyogenes MGAS10394]
gi|50902625|gb|AAT86340.1| DNA polymerase I [Streptococcus pyogenes MGAS10394]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|423230541|ref|ZP_17216945.1| DNA polymerase I [Bacteroides dorei CL02T00C15]
gi|423244250|ref|ZP_17225325.1| DNA polymerase I [Bacteroides dorei CL02T12C06]
gi|392630685|gb|EIY24671.1| DNA polymerase I [Bacteroides dorei CL02T00C15]
gi|392642431|gb|EIY36197.1| DNA polymerase I [Bacteroides dorei CL02T12C06]
Length = 971
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI ++G +
Sbjct: 161 GIEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSI 212
>gi|323488671|ref|ZP_08093913.1| 5'-3' exonuclease [Planococcus donghaensis MPA1U2]
gi|323397689|gb|EGA90493.1| 5'-3' exonuclease [Planococcus donghaensis MPA1U2]
Length = 299
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 9 FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
F +YG ++PSQF DV + +GD +D PGV+GIG A+QLI +G +E E+
Sbjct: 169 FIEEYG-IQPSQFADVKAFMGDPSDGYPGVKGIGPKTALQLIQNYGSTNGVLEAIEEL 225
>gi|345514278|ref|ZP_08793791.1| DNA polymerase I [Bacteroides dorei 5_1_36/D4]
gi|229437257|gb|EEO47334.1| DNA polymerase I [Bacteroides dorei 5_1_36/D4]
Length = 971
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI ++G +
Sbjct: 161 GIEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSI 212
>gi|365158108|ref|ZP_09354349.1| DNA polymerase I [Bacillus smithii 7_3_47FAA]
gi|363621937|gb|EHL73119.1| DNA polymerase I [Bacillus smithii 7_3_47FAA]
Length = 876
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KYG L P Q +D+ L+GD +DNIPGV GIG+ A++L+ +F
Sbjct: 163 EHVKEKYG-LTPQQIIDMKGLMGDSSDNIPGVPGIGEKTAIKLLKEF 208
>gi|212692553|ref|ZP_03300681.1| hypothetical protein BACDOR_02050 [Bacteroides dorei DSM 17855]
gi|423240816|ref|ZP_17221930.1| DNA polymerase I [Bacteroides dorei CL03T12C01]
gi|212664838|gb|EEB25410.1| DNA-directed DNA polymerase [Bacteroides dorei DSM 17855]
gi|392643778|gb|EIY37527.1| DNA polymerase I [Bacteroides dorei CL03T12C01]
Length = 971
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI ++G +
Sbjct: 161 GIEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSI 212
>gi|115424492|dbj|BAF33374.1| DNA polymerase I [Bacillus smithii]
Length = 876
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KYG L P Q +D+ L+GD +DNIPGV GIG+ A++L+ +F
Sbjct: 163 EHVKEKYG-LTPQQIIDMKGLMGDSSDNIPGVPGIGEKTAIKLLKEF 208
>gi|449115967|ref|ZP_21752427.1| DNA polymerase I [Treponema denticola H-22]
gi|448955453|gb|EMB36220.1| DNA polymerase I [Treponema denticola H-22]
Length = 944
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG E+ ++G + P+ +D++SL+GD ADN+PG++G+G AV+L+ ++ L
Sbjct: 161 FGAENVKEEWG-VYPAGMLDLLSLIGDSADNVPGIKGVGPKTAVKLLEEYKTL 212
>gi|261878884|ref|ZP_06005311.1| DNA-directed DNA polymerase I, partial [Prevotella bergensis DSM
17361]
gi|270334524|gb|EFA45310.1| DNA-directed DNA polymerase I [Prevotella bergensis DSM 17361]
Length = 661
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G ++ KYG +Q +D+++L+GD +DN PG G+G+ AV+LI +FG
Sbjct: 160 GEKEIQAKYGIASAAQVIDLLALMGDSSDNYPGCPGVGEKTAVKLIHEFG 209
>gi|217975428|ref|YP_002360179.1| DNA polymerase I [Shewanella baltica OS223]
gi|217500563|gb|ACK48756.1| DNA polymerase I [Shewanella baltica OS223]
Length = 921
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G E+ A K+G + P + +D+++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPEEVAIKFG-VGPDRIIDLLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|153002841|ref|YP_001368522.1| DNA polymerase I [Shewanella baltica OS185]
gi|151367459|gb|ABS10459.1| DNA polymerase I [Shewanella baltica OS185]
Length = 935
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G E+ A K+G + P + +D+++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 175 GPEEVAIKFG-VGPDRIIDLLALMGDKADNIPGLPGVGEKTALAMLTGAG 223
>gi|160877586|ref|YP_001556902.1| DNA polymerase I [Shewanella baltica OS195]
gi|378710795|ref|YP_005275689.1| DNA polymerase I [Shewanella baltica OS678]
gi|418022904|ref|ZP_12661890.1| DNA polymerase I [Shewanella baltica OS625]
gi|160863108|gb|ABX51642.1| DNA polymerase I [Shewanella baltica OS195]
gi|315269784|gb|ADT96637.1| DNA polymerase I [Shewanella baltica OS678]
gi|353537906|gb|EHC07462.1| DNA polymerase I [Shewanella baltica OS625]
Length = 921
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G E+ A K+G + P + +D+++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPEEVAIKFG-VGPDRIIDLLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|94495837|ref|ZP_01302416.1| DNA polymerase I [Sphingomonas sp. SKA58]
gi|94424529|gb|EAT09551.1| DNA polymerase I [Sphingomonas sp. SKA58]
Length = 928
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G ++P Q DV++L+GD DN+PG+ GIG A +LIT++G L
Sbjct: 169 KFG-VQPEQLGDVLALMGDSVDNVPGIPGIGPKTAAKLITEYGGL 212
>gi|379011988|ref|YP_005269800.1| DNA polymerase I [Acetobacterium woodii DSM 1030]
gi|375302777|gb|AFA48911.1| DNA polymerase I [Acetobacterium woodii DSM 1030]
Length = 859
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+YG L P +D+ +L+GDK+DNIPG+ GIG+ A++L+ ++G L
Sbjct: 145 QYG-LTPKDLIDLKALMGDKSDNIPGIAGIGEKTAIKLLQQYGTL 188
>gi|329929159|ref|ZP_08282945.1| DNA-directed DNA polymerase [Paenibacillus sp. HGF5]
gi|328936836|gb|EGG33271.1| DNA-directed DNA polymerase [Paenibacillus sp. HGF5]
Length = 886
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+G E +Y L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +FG
Sbjct: 159 YGPEQIKERY-NLTPDQIIDLKGLMGDASDNIPGVPGVGEKTALKLLHEFG 208
>gi|373947471|ref|ZP_09607432.1| DNA polymerase I [Shewanella baltica OS183]
gi|386326680|ref|YP_006022797.1| DNA polymerase I [Shewanella baltica BA175]
gi|333820825|gb|AEG13491.1| DNA polymerase I [Shewanella baltica BA175]
gi|373884071|gb|EHQ12963.1| DNA polymerase I [Shewanella baltica OS183]
Length = 921
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
G E+ A K+G + P + +D+++L+GDKADNIPG+ G+G+ A+ ++T G
Sbjct: 161 GPEEVAIKFG-VGPDRIIDLLALMGDKADNIPGLPGVGEKTALAMLTGAG 209
>gi|196232728|ref|ZP_03131579.1| 5'-3' exonuclease [Chthoniobacter flavus Ellin428]
gi|196223188|gb|EDY17707.1| 5'-3' exonuclease [Chthoniobacter flavus Ellin428]
Length = 323
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 ASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A G++ +K+G ++P Q DV++L+GD DNIPGVEG+G A L+ G L
Sbjct: 161 ALLGIDAVRKKWG-VEPQQIGDVLALIGDTVDNIPGVEGVGPKGAATLLNTHGSL 214
>gi|261408692|ref|YP_003244933.1| DNA polymerase I [Paenibacillus sp. Y412MC10]
gi|261285155|gb|ACX67126.1| DNA polymerase I [Paenibacillus sp. Y412MC10]
Length = 886
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+G E +Y L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +FG
Sbjct: 159 YGPEQIKERY-NLTPDQIIDLKGLMGDASDNIPGVPGVGEKTALKLLHEFG 208
>gi|15674390|ref|NP_268564.1| DNA polymerase I [Streptococcus pyogenes SF370]
gi|13621480|gb|AAK33285.1| DNA-directed DNA polymerase I [Streptococcus pyogenes M1 GAS]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|295687670|ref|YP_003591363.1| DNA polymerase I [Caulobacter segnis ATCC 21756]
gi|295429573|gb|ADG08745.1| DNA polymerase I [Caulobacter segnis ATCC 21756]
Length = 966
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E K+G + P Q VDV +L GD DN+PG GIG A QLIT+FG L
Sbjct: 185 EQVFEKFG-VYPEQVVDVQALCGDSVDNVPGAPGIGIKTAAQLITEFGDL 233
>gi|209558735|ref|YP_002285207.1| DNA polymerase I [Streptococcus pyogenes NZ131]
gi|209539936|gb|ACI60512.1| DNA polymerase I [Streptococcus pyogenes NZ131]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|193212192|ref|YP_001998145.1| DNA polymerase I [Chlorobaculum parvum NCIB 8327]
gi|193085669|gb|ACF10945.1| DNA polymerase I [Chlorobaculum parvum NCIB 8327]
Length = 950
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G + A ++G P QF+D+++L GD +DNIPG +GIG A L+ ++G L
Sbjct: 194 GSREVAEQFGA-PPEQFIDLLTLTGDTSDNIPGAKGIGPKTASSLLEEYGSL 244
>gi|139473034|ref|YP_001127749.1| DNA polymerase I [Streptococcus pyogenes str. Manfredo]
gi|134271280|emb|CAM29496.1| DNA polymerase I [Streptococcus pyogenes str. Manfredo]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|94993561|ref|YP_601659.1| DNA polymerase I [Streptococcus pyogenes MGAS10750]
gi|94547069|gb|ABF37115.1| DNA polymerase I [Streptococcus pyogenes MGAS10750]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|71902823|ref|YP_279626.1| DNA polymerase I [Streptococcus pyogenes MGAS6180]
gi|71801918|gb|AAX71271.1| DNA polymerase I [Streptococcus pyogenes MGAS6180]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|414156626|ref|ZP_11412927.1| DNA polymerase I [Streptococcus sp. F0442]
gi|410869619|gb|EKS17579.1| DNA polymerase I [Streptococcus sp. F0442]
Length = 894
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
L P QF+D+ +L+GDK+DNIPGV IG+ ++L+ ++G L E EM
Sbjct: 192 LTPEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLDGIYEHIDEM 242
>gi|336113910|ref|YP_004568677.1| 5'-3' exonuclease [Bacillus coagulans 2-6]
gi|335367340|gb|AEH53291.1| 5'-3' exonuclease [Bacillus coagulans 2-6]
Length = 299
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 9 FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
F +YG + P QF+DV +L+GD +D PGV+GIG+ A +L++++G L +E E+
Sbjct: 170 FMDEYG-VTPRQFIDVKALMGDASDGYPGVKGIGEKTAFKLVSRYGNLSGILEHLGEL 226
>gi|326335129|ref|ZP_08201326.1| DNA-directed DNA polymerase I [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325692659|gb|EGD34601.1| DNA-directed DNA polymerase I [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 929
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+E+ +G P Q +D++ ++GD DNIPG+ G+G+ A +L+ +FG +
Sbjct: 161 WGVEEVKENFGVDTPEQVIDLLGMMGDAVDNIPGLPGVGEKTAQKLLKEFGSM 213
>gi|325842039|ref|ZP_08167576.1| DNA-directed DNA polymerase [Turicibacter sp. HGF1]
gi|325489761|gb|EGC92117.1| DNA-directed DNA polymerase [Turicibacter sp. HGF1]
Length = 878
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ SF E KY EL PSQ VD+ L+GD +DN+PG+ G+G+ A++L+ ++
Sbjct: 161 IESFTPEAVFEKY-ELSPSQIVDLKGLMGDPSDNLPGIPGVGEKTAIKLLKEY 212
>gi|422759941|ref|ZP_16813703.1| DNA polymerase I [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
gi|322412776|gb|EFY03684.1| DNA polymerase I [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|410584031|ref|ZP_11321136.1| DNA polymerase I [Thermaerobacter subterraneus DSM 13965]
gi|410504893|gb|EKP94403.1| DNA polymerase I [Thermaerobacter subterraneus DSM 13965]
Length = 1072
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ P+Q++DV +L+GD +DNIPGV GIG+ A++LI + G L
Sbjct: 245 IDPAQYLDVKALMGDPSDNIPGVPGIGEKTALKLIQQLGDL 285
>gi|150003775|ref|YP_001298519.1| DNA polymerase I [Bacteroides vulgatus ATCC 8482]
gi|149932199|gb|ABR38897.1| DNA polymerase I [Bacteroides vulgatus ATCC 8482]
Length = 971
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI ++G +
Sbjct: 161 GIEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSI 212
>gi|71909973|ref|YP_281523.1| DNA polymerase I [Streptococcus pyogenes MGAS5005]
gi|94987792|ref|YP_595893.1| DNA polymerase I [Streptococcus pyogenes MGAS9429]
gi|410679853|ref|YP_006932255.1| DNA polymerase I family protein [Streptococcus pyogenes A20]
gi|417856024|ref|ZP_12501083.1| DNA polymerase I [Streptococcus pyogenes HKU QMH11M0907901]
gi|71852755|gb|AAZ50778.1| DNA polymerase I [Streptococcus pyogenes MGAS5005]
gi|94541300|gb|ABF31349.1| DNA polymerase I [Streptococcus pyogenes MGAS9429]
gi|387932979|gb|EIK41092.1| DNA polymerase I [Streptococcus pyogenes HKU QMH11M0907901]
gi|395453200|dbj|BAM29539.1| DNA polymerase I [Streptococcus pyogenes M1 476]
gi|409692442|gb|AFV37302.1| DNA polymerase I family protein [Streptococcus pyogenes A20]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|19745349|ref|NP_606485.1| DNA polymerase I [Streptococcus pyogenes MGAS8232]
gi|19747453|gb|AAL96984.1| DNA-directed DNA polymerase I [Streptococcus pyogenes MGAS8232]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|423333996|ref|ZP_17311777.1| DNA polymerase I [Parabacteroides distasonis CL03T12C09]
gi|409226145|gb|EKN19055.1| DNA polymerase I [Parabacteroides distasonis CL03T12C09]
Length = 921
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + KYG Q +D++ L+GD +DNIPG G+G+ A +L+T+FG +
Sbjct: 160 GVPEVLNKYGLTSTEQVIDLLGLMGDASDNIPGCPGVGEKTAQKLLTEFGSI 211
>gi|406658765|ref|ZP_11066905.1| DNA-directed DNA polymerase I [Streptococcus iniae 9117]
gi|405578980|gb|EKB53094.1| DNA-directed DNA polymerase I [Streptococcus iniae 9117]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPAQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|421892044|ref|ZP_16322762.1| DNA polymerase I [Streptococcus pyogenes NS88.2]
gi|379982207|emb|CCG26484.1| DNA polymerase I [Streptococcus pyogenes NS88.2]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|332799559|ref|YP_004461058.1| DNA polymerase I [Tepidanaerobacter acetatoxydans Re1]
gi|332697294|gb|AEE91751.1| DNA polymerase I [Tepidanaerobacter acetatoxydans Re1]
Length = 864
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M ++ E +YG ++P D+ L+GDK+DNIPGV G+G+ A +LI +F L
Sbjct: 156 METYDTEKVKSRYG-IRPEAVADMKGLMGDKSDNIPGVPGVGEKTAAKLIQEFKTL 210
>gi|262383147|ref|ZP_06076284.1| DNA polymerase I [Bacteroides sp. 2_1_33B]
gi|262296025|gb|EEY83956.1| DNA polymerase I [Bacteroides sp. 2_1_33B]
Length = 921
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + KYG Q +D++ L+GD +DNIPG G+G+ A +L+T+FG +
Sbjct: 160 GVPEVLNKYGLTSTEQVIDLLGLMGDASDNIPGCPGVGEKTAQKLLTEFGSI 211
>gi|251795550|ref|YP_003010281.1| DNA polymerase I [Paenibacillus sp. JDR-2]
gi|247543176|gb|ACT00195.1| DNA polymerase I [Paenibacillus sp. JDR-2]
Length = 890
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG LKP Q +D+ L+GD +DNIPG+ G+G+ A++++ +FG +
Sbjct: 167 KYG-LKPMQIIDLKGLMGDASDNIPGIPGVGEKTALKMLHEFGTV 210
>gi|406990297|gb|EKE09975.1| hypothetical protein ACD_16C00099G0033 [uncultured bacterium]
Length = 899
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E+ K+G + P+Q +DV +L GD DN+PGV GIG A +LI +G L
Sbjct: 157 GAEEVREKFG-VPPNQVIDVQALAGDPTDNVPGVPGIGIKTAAELIQTYGNL 207
>gi|383479362|ref|YP_005388256.1| DNA-directed DNA polymerase I PolA/PolI [Streptococcus pyogenes
MGAS15252]
gi|383493287|ref|YP_005410963.1| DNA-directed DNA polymerase I PolA/PolI [Streptococcus pyogenes
MGAS1882]
gi|378927352|gb|AFC65558.1| DNA-directed DNA polymerase I PolA/PolI [Streptococcus pyogenes
MGAS15252]
gi|378929015|gb|AFC67432.1| DNA-directed DNA polymerase I PolA/PolI [Streptococcus pyogenes
MGAS1882]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|386362030|ref|YP_006071361.1| DNA polymerase I family protein [Streptococcus pyogenes Alab49]
gi|350276439|gb|AEQ23807.1| DNA polymerase I family protein [Streptococcus pyogenes Alab49]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|291572090|dbj|BAI94362.1| DNA polymerase I [Arthrospira platensis NIES-39]
Length = 959
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+KP Q VD +L GDK+D IPGV GIG+ AV+L+ ++G L
Sbjct: 182 IKPEQVVDYKALCGDKSDCIPGVRGIGEKTAVKLLAEYGSL 222
>gi|423313082|ref|ZP_17291018.1| DNA polymerase I [Bacteroides vulgatus CL09T03C04]
gi|392686296|gb|EIY79602.1| DNA polymerase I [Bacteroides vulgatus CL09T03C04]
Length = 971
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI ++G +
Sbjct: 161 GIEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSI 212
>gi|298373964|ref|ZP_06983922.1| DNA polymerase type I [Bacteroides sp. 3_1_19]
gi|298268332|gb|EFI09987.1| DNA polymerase type I [Bacteroides sp. 3_1_19]
Length = 921
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + KYG Q +D++ L+GD +DNIPG G+G+ A +L+T+FG +
Sbjct: 160 GVPEVLNKYGLTSTEQVIDLLGLMGDASDNIPGCPGVGEKTAQKLLTEFGSI 211
>gi|94543178|gb|ABF33226.1| DNA polymerase I [Streptococcus pyogenes MGAS10270]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|3913510|sp|O52225.1|DPO1_THEFI RecName: Full=DNA polymerase I, thermostable; AltName: Full=TFI
polymerase 1
gi|2739139|gb|AAC46079.1| thermostable DNA polymerase [Thermus filiformis]
Length = 833
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+D KYG + P ++VD +L GD++DNIPGV GIG+ A++L+ ++G
Sbjct: 165 KDVQEKYG-VPPERWVDFRALTGDRSDNIPGVAGIGEKTALRLLAEWG 211
>gi|330997297|ref|ZP_08321150.1| DNA-directed DNA polymerase [Paraprevotella xylaniphila YIT 11841]
gi|329571092|gb|EGG52799.1| DNA-directed DNA polymerase [Paraprevotella xylaniphila YIT 11841]
Length = 923
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+++ K+ P+Q +D++ L+GD +DNIPG G+G A +L+ +FG +
Sbjct: 163 GVKEVTEKFDISSPTQVIDILGLMGDSSDNIPGCPGVGGKTASKLVNQFGSI 214
>gi|298242591|ref|ZP_06966398.1| DNA polymerase I [Ktedonobacter racemifer DSM 44963]
gi|297555645|gb|EFH89509.1| DNA polymerase I [Ktedonobacter racemifer DSM 44963]
Length = 1041
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+YG P Q +D LVGDK+DNIPGV GIG A +LI ++G L
Sbjct: 174 RYG-FAPHQLIDYKGLVGDKSDNIPGVAGIGAKTATRLIVEYGNL 217
>gi|291550064|emb|CBL26326.1| DNA polymerase I [Ruminococcus torques L2-14]
Length = 871
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
D +YG + P +F+DV +L+GD ADNIPGV G+G+ A ++I ++
Sbjct: 166 DVQERYG-VTPKEFIDVKALMGDTADNIPGVPGVGEKTATKIIQQY 210
>gi|255013148|ref|ZP_05285274.1| DNA polymerase I [Bacteroides sp. 2_1_7]
gi|410102610|ref|ZP_11297536.1| DNA polymerase I [Parabacteroides sp. D25]
gi|409238682|gb|EKN31473.1| DNA polymerase I [Parabacteroides sp. D25]
Length = 921
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + KYG Q +D++ L+GD +DNIPG G+G+ A +L+T+FG +
Sbjct: 160 GVPEVLNKYGLTSTEQVIDLLGLMGDASDNIPGCPGVGEKTAQKLLTEFGSI 211
>gi|154175515|ref|YP_001408840.1| DNA polymerase I [Campylobacter curvus 525.92]
gi|402547179|ref|ZP_10844051.1| DNA-directed DNA polymerase [Campylobacter sp. FOBRC14]
gi|112803673|gb|EAU01017.1| DNA polymerase I superfamily [Campylobacter curvus 525.92]
gi|401016557|gb|EJP75321.1| DNA-directed DNA polymerase [Campylobacter sp. FOBRC14]
Length = 879
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG ++P Q D +++ GD +DNIPGV+GIG V A +L+ +FG L
Sbjct: 164 KYG-VRPEQIRDFLAIAGDSSDNIPGVKGIGAVGAKKLLAEFGSL 207
>gi|387128320|ref|YP_006296925.1| DNA polymerase I [Methylophaga sp. JAM1]
gi|386275382|gb|AFI85280.1| DNA polymerase I [Methylophaga sp. JAM1]
Length = 904
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
K+G L P Q VD ++L+GDK DNIPGV+ +G A +L+ ++G L
Sbjct: 166 KFG-LTPQQIVDYLALMGDKVDNIPGVDSVGPKTATKLLQQYGSL 209
>gi|385800354|ref|YP_005836758.1| DNA polymerase I [Halanaerobium praevalens DSM 2228]
gi|309389718|gb|ADO77598.1| DNA polymerase I [Halanaerobium praevalens DSM 2228]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E KY EL P + +D L+GD +DNIPGV GIG A++L+ +FG +
Sbjct: 164 LIKFDEEKVMEKY-ELTPEKLIDRKGLMGDSSDNIPGVPGIGKKTALKLLKEFGTM 218
>gi|260654849|ref|ZP_05860337.1| DNA polymerase I [Jonquetella anthropi E3_33 E1]
gi|260630564|gb|EEX48758.1| DNA polymerase I [Jonquetella anthropi E3_33 E1]
Length = 848
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E FA+++G P VD ++LVGDK DN+PGV +GD A +L++ +G +
Sbjct: 170 ESFAQEWG-FPPRLMVDYLALVGDKVDNVPGVPSVGDKTAKRLLSSYGSI 218
>gi|456013010|gb|EMF46691.1| DNA polymerase I [Planococcus halocryophilus Or1]
Length = 299
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 9 FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
F +YG ++PSQF DV + +GD +D PGV+GIG A+QLI +G
Sbjct: 169 FIEEYG-IQPSQFADVKAFMGDPSDGYPGVKGIGPKTALQLIQNYG 213
>gi|424844725|ref|ZP_18269336.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Jonquetella anthropi DSM 22815]
gi|363986163|gb|EHM12993.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Jonquetella anthropi DSM 22815]
Length = 841
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E FA+++G P VD ++LVGDK DN+PGV +GD A +L++ +G +
Sbjct: 163 ESFAQEWG-FPPRLMVDYLALVGDKVDNVPGVPSVGDKTAKRLLSSYGSI 211
>gi|301311753|ref|ZP_07217678.1| DNA polymerase type I [Bacteroides sp. 20_3]
gi|423337448|ref|ZP_17315192.1| DNA polymerase I [Parabacteroides distasonis CL09T03C24]
gi|300830313|gb|EFK60958.1| DNA polymerase type I [Bacteroides sp. 20_3]
gi|409237277|gb|EKN30077.1| DNA polymerase I [Parabacteroides distasonis CL09T03C24]
Length = 921
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + KYG Q +D++ L+GD +DNIPG G+G+ A +L+T+FG +
Sbjct: 160 GVPEVLNKYGLTSTEQVIDLLGLMGDASDNIPGCPGVGEKTAQKLLTEFGSI 211
>gi|294777402|ref|ZP_06742853.1| DNA-directed DNA polymerase [Bacteroides vulgatus PC510]
gi|294448470|gb|EFG17019.1| DNA-directed DNA polymerase [Bacteroides vulgatus PC510]
Length = 971
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI ++G +
Sbjct: 161 GIEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSI 212
>gi|150009559|ref|YP_001304302.1| DNA polymerase I [Parabacteroides distasonis ATCC 8503]
gi|149937983|gb|ABR44680.1| DNA polymerase I [Parabacteroides distasonis ATCC 8503]
Length = 921
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + KYG Q +D++ L+GD +DNIPG G+G+ A +L+T+FG +
Sbjct: 160 GVPEVLNKYGLTSTEQVIDLLGLMGDASDNIPGCPGVGEKTAQKLLTEFGSI 211
>gi|399022982|ref|ZP_10725049.1| DNA polymerase I [Chryseobacterium sp. CF314]
gi|398083541|gb|EJL74246.1| DNA polymerase I [Chryseobacterium sp. CF314]
Length = 941
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ KY P Q +D ++++GD DNIPG++G+G+ A++ + +FG +
Sbjct: 166 LGVEEVKAKYEIEDPKQVIDFLAMMGDAVDNIPGLDGVGEKTAMKFLKEFGTI 218
>gi|387878650|ref|YP_006308953.1| DNA polymerase I [Streptococcus parasanguinis FW213]
gi|386792107|gb|AFJ25142.1| DNA polymerase I [Streptococcus parasanguinis FW213]
Length = 894
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
L P QF+D+ +L+GDK+DNIPGV IG+ ++L+ ++G L E EM
Sbjct: 192 LTPEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLDGIYEHIDEM 242
>gi|339443118|ref|YP_004709123.1| hypothetical protein CXIVA_20540 [Clostridium sp. SY8519]
gi|338902519|dbj|BAK48021.1| hypothetical protein CXIVA_20540 [Clostridium sp. SY8519]
Length = 904
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+D +Y ++ P +F+DV +L+GD +DNIPGV GIG+ A +LI ++
Sbjct: 165 QDVMDRY-QVTPEEFIDVKALMGDSSDNIPGVPGIGEKTATKLIVRY 210
>gi|322390655|ref|ZP_08064169.1| DNA-directed DNA polymerase I [Streptococcus parasanguinis ATCC
903]
gi|321142628|gb|EFX38092.1| DNA-directed DNA polymerase I [Streptococcus parasanguinis ATCC
903]
Length = 881
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
L P QF+D+ +L+GDK+DNIPGV IG+ ++L+ ++G L E EM
Sbjct: 179 LTPEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLDGIYEHIDEM 229
>gi|319945840|ref|ZP_08020090.1| DNA-directed DNA polymerase I [Streptococcus australis ATCC 700641]
gi|417919540|ref|ZP_12563071.1| DNA-directed DNA polymerase [Streptococcus australis ATCC 700641]
gi|319747905|gb|EFW00149.1| DNA-directed DNA polymerase I [Streptococcus australis ATCC 700641]
gi|342832921|gb|EGU67210.1| DNA-directed DNA polymerase [Streptococcus australis ATCC 700641]
Length = 881
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
L P QF+D+ +L+GDK+DNIPGV IG+ ++L+ ++G L E EM
Sbjct: 179 LTPEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLDGIYEHIDEM 229
>gi|256838291|ref|ZP_05543801.1| DNA polymerase I [Parabacteroides sp. D13]
gi|256739210|gb|EEU52534.1| DNA polymerase I [Parabacteroides sp. D13]
Length = 925
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + KYG Q +D++ L+GD +DNIPG G+G+ A +L+T+FG +
Sbjct: 164 GVPEVLNKYGLTSTEQVIDLLGLMGDASDNIPGCPGVGEKTAQKLLTEFGSI 215
>gi|319640001|ref|ZP_07994728.1| DNA polymerase I [Bacteroides sp. 3_1_40A]
gi|345517007|ref|ZP_08796487.1| DNA polymerase I [Bacteroides sp. 4_3_47FAA]
gi|254833786|gb|EET14095.1| DNA polymerase I [Bacteroides sp. 4_3_47FAA]
gi|317388279|gb|EFV69131.1| DNA polymerase I [Bacteroides sp. 3_1_40A]
Length = 971
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI ++G +
Sbjct: 161 GIEEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAQYGSI 212
>gi|288575147|ref|ZP_06393504.1| DNA polymerase I [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570888|gb|EFC92445.1| DNA polymerase I [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 854
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E F +YG P++ D ++LVGD DN+PGV GIGD A +L+ K+G L
Sbjct: 161 WDAETFQGEYG-FPPARMADYLALVGDSVDNVPGVPGIGDKTARRLLGKYGDL 212
>gi|170749936|ref|YP_001756196.1| DNA polymerase I [Methylobacterium radiotolerans JCM 2831]
gi|170656458|gb|ACB25513.1| DNA polymerase I [Methylobacterium radiotolerans JCM 2831]
Length = 1060
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+E K+ L+P+Q D ++L+GD +DN+PGV GIG A LI +FG L
Sbjct: 202 VEAIVAKWEGLQPNQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEFGSL 252
>gi|404421596|ref|ZP_11003310.1| DNA polymerase I [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403658824|gb|EJZ13522.1| DNA polymerase I [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 908
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ F E A KYG L P+Q+ D +L GD +DN+PG+ G+G+ A + I ++G L
Sbjct: 176 LTRFTPEAVAEKYG-LTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIVEYGSL 230
>gi|389573843|ref|ZP_10163914.1| DNA polymerase I [Bacillus sp. M 2-6]
gi|388426413|gb|EIL84227.1| DNA polymerase I [Bacillus sp. M 2-6]
Length = 879
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
KYG L+P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 170 KYG-LRPDQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQF 210
>gi|317495649|ref|ZP_07954016.1| DNA polymerase I [Gemella morbillorum M424]
gi|316914268|gb|EFV35747.1| DNA polymerase I [Gemella morbillorum M424]
Length = 873
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
KYG L P Q +D+ L+GDK+DNIPGV GIG+ A++L+ ++
Sbjct: 167 KYG-LSPEQIIDMKGLMGDKSDNIPGVAGIGEKTAIKLLAEY 207
>gi|312867003|ref|ZP_07727214.1| DNA-directed DNA polymerase [Streptococcus parasanguinis F0405]
gi|311097485|gb|EFQ55718.1| DNA-directed DNA polymerase [Streptococcus parasanguinis F0405]
Length = 881
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
L P QF+D+ +L+GDK+DNIPGV IG+ ++L+ ++G L E EM
Sbjct: 179 LTPEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLDGIYEHIDEM 229
>gi|293376455|ref|ZP_06622684.1| DNA-directed DNA polymerase [Turicibacter sanguinis PC909]
gi|292644877|gb|EFF62958.1| DNA-directed DNA polymerase [Turicibacter sanguinis PC909]
Length = 878
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ SF E KY EL PSQ VD+ L+GD +DN+PG+ G+G+ A++L+ ++
Sbjct: 161 IESFTPEAVFEKY-ELSPSQIVDLKGLMGDPSDNLPGIPGVGEKTAIKLLKEY 212
>gi|451343314|ref|ZP_21912387.1| DNA polymerase I [Eggerthia catenaformis OT 569 = DSM 20559]
gi|449337894|gb|EMD17049.1| DNA polymerase I [Eggerthia catenaformis OT 569 = DSM 20559]
Length = 869
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ E + KY +L P Q D + L+GD ADNIPG++G+G+ A++L+ ++G +
Sbjct: 163 YNKETLSEKY-DLSPDQIRDFLGLMGDTADNIPGIKGVGEKTALKLLHQYGTI 214
>gi|374293801|ref|YP_005040824.1| DNA polymerase I [Azospirillum lipoferum 4B]
gi|357427204|emb|CBS90145.1| DNA polymerase I [Azospirillum lipoferum 4B]
Length = 971
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G ++ K+G + P + VDV +L GD DN+PGV GIG A QLIT++G L
Sbjct: 176 AIGPDEVFEKFG-VPPEKVVDVQALAGDSVDNVPGVPGIGVKTAAQLITEYGDL 228
>gi|306828146|ref|ZP_07461409.1| DNA-directed DNA polymerase I [Streptococcus pyogenes ATCC 10782]
gi|304429683|gb|EFM32729.1| DNA-directed DNA polymerase I [Streptococcus pyogenes ATCC 10782]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|297559935|ref|YP_003678909.1| DNA polymerase I [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296844383|gb|ADH66403.1| DNA polymerase I [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 928
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P ++ D+ +LVG+KADN+PGV G+G A + ITK+G L
Sbjct: 188 KYG-VTPERYRDLAALVGEKADNLPGVPGVGPKTAAKWITKYGSL 231
>gi|429727615|ref|ZP_19262379.1| DNA-directed DNA polymerase [Peptostreptococcus anaerobius VPI
4330]
gi|429151919|gb|EKX94760.1| DNA-directed DNA polymerase [Peptostreptococcus anaerobius VPI
4330]
Length = 909
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ E +Y +L P QF+D+ L+GDK+DNIPG+ GIG+ ++L+ ++G
Sbjct: 177 YNREGVYERY-QLSPDQFIDLKGLMGDKSDNIPGIPGIGEKTGIKLLLEYG 226
>gi|257869278|ref|ZP_05648931.1| DNA polymerase A [Enterococcus gallinarum EG2]
gi|257803442|gb|EEV32264.1| DNA polymerase A [Enterococcus gallinarum EG2]
Length = 881
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ + A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPDHVAEKYDGLAPLQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKEYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|194017403|ref|ZP_03056015.1| DNA polymerase I (POL I) [Bacillus pumilus ATCC 7061]
gi|194011271|gb|EDW20841.1| DNA polymerase I (POL I) [Bacillus pumilus ATCC 7061]
Length = 879
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
KYG L+P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 170 KYG-LRPDQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQF 210
>gi|167768074|ref|ZP_02440127.1| hypothetical protein CLOSS21_02619 [Clostridium sp. SS2/1]
gi|167710403|gb|EDS20982.1| DNA-directed DNA polymerase [Clostridium sp. SS2/1]
Length = 909
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+D KY ++ P +F+DV +L+GD +DNIPG+ GIG+ A +LI +F
Sbjct: 195 DDVLEKY-QVTPKEFIDVKALMGDTSDNIPGIPGIGEKTATKLIKEF 240
>gi|157693309|ref|YP_001487771.1| DNA polymerase I [Bacillus pumilus SAFR-032]
gi|157682067|gb|ABV63211.1| DNA-directed DNA polymerase I [Bacillus pumilus SAFR-032]
Length = 879
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
KYG L+P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F
Sbjct: 170 KYG-LRPDQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQF 210
>gi|429763709|ref|ZP_19296055.1| DNA-directed DNA polymerase [Anaerostipes hadrus DSM 3319]
gi|429177994|gb|EKY19284.1| DNA-directed DNA polymerase [Anaerostipes hadrus DSM 3319]
Length = 909
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+D KY ++ P +F+DV +L+GD +DNIPG+ GIG+ A +LI +F
Sbjct: 195 DDVLEKY-QVTPKEFIDVKALMGDTSDNIPGIPGIGEKTATKLIKEF 240
>gi|410495790|ref|YP_006905636.1| DNA polymerase I [Streptococcus dysgalactiae subsp. equisimilis
AC-2713]
gi|410440950|emb|CCI63578.1| K02335 DNA polymerase I [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 834
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 133 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 173
>gi|420241838|ref|ZP_14745936.1| DNA polymerase I [Rhizobium sp. CF080]
gi|398069376|gb|EJL60735.1| DNA polymerase I [Rhizobium sp. CF080]
Length = 996
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ D K+G + P + +D+ ++VGD DN+PG+ GIG A QL+ +FG L
Sbjct: 167 GIPDVIEKWG-VPPEKMIDLQAMVGDSVDNVPGIPGIGPKTAAQLLEEFGDL 217
>gi|417917036|ref|ZP_12560599.1| DNA-directed DNA polymerase [Streptococcus parasanguinis SK236]
gi|342831200|gb|EGU65522.1| DNA-directed DNA polymerase [Streptococcus parasanguinis SK236]
Length = 881
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
L P QF+D+ +L+GDK+DNIPGV IG+ ++L+ ++G L E EM
Sbjct: 179 LTPEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLDGIYEHIDEM 229
>gi|251783393|ref|YP_002997698.1| DNA polymerase I [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242392025|dbj|BAH82484.1| DNA polymerase I [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|210077513|gb|ACJ07021.1| PolI [Thermus sp. Wai28.A1]
Length = 833
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+D KYG + P ++VD +L GD++DNIPGV GIG+ A++L+ ++G
Sbjct: 165 KDVQEKYG-VPPERWVDFRALTGDRSDNIPGVAGIGEKTALRLLAEWG 211
>gi|210077509|gb|ACJ07019.1| PolI [Thermus sp. Tp10.A2]
Length = 833
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+D KYG + P ++VD +L GD++DNIPGV GIG+ A++L+ ++G
Sbjct: 165 KDVQEKYG-VPPERWVDFRALTGDRSDNIPGVAGIGEKTALRLLAEWG 211
>gi|210077507|gb|ACJ07018.1| PolI [Thermus sp. Tok23.A1]
Length = 833
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+D KYG + P ++VD +L GD++DNIPGV GIG+ A++L+ ++G
Sbjct: 165 KDVQEKYG-VPPERWVDFRALTGDRSDNIPGVAGIGEKTALRLLAEWG 211
>gi|94991667|ref|YP_599766.1| DNA polymerase I [Streptococcus pyogenes MGAS2096]
gi|94545175|gb|ABF35222.1| DNA polymerase I [Streptococcus pyogenes MGAS2096]
Length = 806
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 105 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 145
>gi|406919763|gb|EKD57961.1| DNA polymerase I [uncultured bacterium]
Length = 303
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
G +D K G + PSQ +D +LVGD++DN PGV GIG A+ L+TK+
Sbjct: 164 GKKDVVEKMG-VNPSQIIDYKALVGDQSDNYPGVPGIGPKTAIDLLTKY 211
>gi|392330137|ref|ZP_10274753.1| DNA polymerase I [Streptococcus canis FSL Z3-227]
gi|391420009|gb|EIQ82820.1| DNA polymerase I [Streptococcus canis FSL Z3-227]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 179 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 219
>gi|419800176|ref|ZP_14325475.1| DNA-directed DNA polymerase [Streptococcus parasanguinis F0449]
gi|385696029|gb|EIG26552.1| DNA-directed DNA polymerase [Streptococcus parasanguinis F0449]
Length = 881
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
L P QF+D+ +L+GDK+DNIPGV IG+ ++L+ ++G L E EM
Sbjct: 179 LTPEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLDGIYEHIDEM 229
>gi|381187190|ref|ZP_09894755.1| DNA polymerase I [Flavobacterium frigoris PS1]
gi|379650800|gb|EIA09370.1| DNA polymerase I [Flavobacterium frigoris PS1]
Length = 946
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+ + +K+ +P Q +D + ++GD ADNIPG+ G+G+V A + + +FG +
Sbjct: 164 WGVPEVLKKFEIERPDQVIDFLGMMGDAADNIPGLPGVGEVTAKKFLKEFGTM 216
>gi|210077505|gb|ACJ07017.1| PolI [Thermus sp. OH.A2]
Length = 833
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+D KYG + P ++VD +L GD++DNIPGV GIG+ A++L+ ++G
Sbjct: 165 KDVQEKYG-VPPERWVDFRALTGDRSDNIPGVAGIGEKTALRLLAEWG 211
>gi|254384234|ref|ZP_04999578.1| DNA polymerase I [Streptomyces sp. Mg1]
gi|194343123|gb|EDX24089.1| DNA polymerase I [Streptomyces sp. Mg1]
Length = 906
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ F E KYG L P Q+ D +L GD +DN+PG+ G+G+ A + IT+FG V
Sbjct: 174 LTRFTPEKVEEKYG-LTPQQYPDFAALRGDPSDNLPGIPGVGEKTAAKWITQFGSFAELV 232
Query: 61 E 61
E
Sbjct: 233 E 233
>gi|38146983|gb|AAR11876.1| DNA polymerase I [Thermus filiformis]
Length = 833
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+D KYG + P ++VD +L GD++DNIPGV GIG+ A++L+ ++G
Sbjct: 165 KDVQEKYG-VPPERWVDFRALTGDRSDNIPGVAGIGEKTALRLLAEWG 211
>gi|357050168|ref|ZP_09111376.1| hypothetical protein HMPREF9478_01359 [Enterococcus saccharolyticus
30_1]
gi|355381991|gb|EHG29101.1| hypothetical protein HMPREF9478_01359 [Enterococcus saccharolyticus
30_1]
Length = 881
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ S+ + A KY L P Q +D+ L GD +DNIPGV IG+ A++L+ ++G +
Sbjct: 162 IESYTPDHVAEKYDGLAPLQIIDMKGLAGDASDNIPGVTKIGEKTAIKLLKEYGSVEGIY 221
Query: 61 ECFSEM 66
E EM
Sbjct: 222 EHIDEM 227
>gi|317051804|ref|YP_004112920.1| DNA polymerase I [Desulfurispirillum indicum S5]
gi|316946888|gb|ADU66364.1| DNA polymerase I [Desulfurispirillum indicum S5]
Length = 881
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 9 FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F K G + P+Q +D ++LVGD +DNIPGV+GIG A +L+ ++G L
Sbjct: 161 FHDKMG-VTPAQVIDYLALVGDASDNIPGVKGIGPKSAQKLLEQYGTL 207
>gi|383783480|ref|YP_005468046.1| DNA polymerase I [Leptospirillum ferrooxidans C2-3]
gi|383082389|dbj|BAM05916.1| putative DNA polymerase I [Leptospirillum ferrooxidans C2-3]
Length = 868
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
FG+ ++G L PSQ D+++L+GD +DNIPGV G+G V A +L+ + G
Sbjct: 181 FGVSQVIDRWGVL-PSQIPDLLALMGDTSDNIPGVPGVGPVTAAKLLGQSG 230
>gi|295696996|ref|YP_003590234.1| DNA polymerase I [Kyrpidia tusciae DSM 2912]
gi|295412598|gb|ADG07090.1| DNA polymerase I [Kyrpidia tusciae DSM 2912]
Length = 890
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVE 61
D +++G L+P Q VD+ L+GD +DNIPGV G+G+ A +L+ +G NVE
Sbjct: 167 DVEKRFG-LRPEQIVDLKGLMGDTSDNIPGVPGVGERTAAKLLQAYG----NVE 215
>gi|392379948|ref|YP_004987106.1| DNA polymerase I (POL I) [Azospirillum brasilense Sp245]
gi|356882315|emb|CCD03321.1| DNA polymerase I (POL I) [Azospirillum brasilense Sp245]
Length = 955
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G ++ K+G + P + VDV +L GD DN+PGV GIG A QLIT++G L
Sbjct: 178 GPDEVFEKFG-VAPDRVVDVQALAGDSVDNVPGVPGIGVKTAAQLITEYGDL 228
>gi|162447216|ref|YP_001620348.1| DNA polymerase I [Acholeplasma laidlawii PG-8A]
gi|161985323|gb|ABX80972.1| DNA polymerase I [Acholeplasma laidlawii PG-8A]
Length = 880
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 21 FVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F+D +LVGDK+DNIPGV G+G+V A +LI ++G L
Sbjct: 179 FIDFKALVGDKSDNIPGVPGVGEVTAKKLIAEYGTL 214
>gi|379724047|ref|YP_005316178.1| hypothetical protein PM3016_6397 [Paenibacillus mucilaginosus 3016]
gi|378572719|gb|AFC33029.1| YpcP [Paenibacillus mucilaginosus 3016]
Length = 297
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
L P QF+D+ L+GD +DN PGV+GIG+ AV+L+ ++G
Sbjct: 177 LTPQQFIDLKGLIGDTSDNYPGVKGIGEKTAVKLLLEYG 215
>gi|423395136|ref|ZP_17372337.1| DNA polymerase I [Bacillus cereus BAG2X1-1]
gi|423405996|ref|ZP_17383145.1| DNA polymerase I [Bacillus cereus BAG2X1-3]
gi|401655907|gb|EJS73435.1| DNA polymerase I [Bacillus cereus BAG2X1-1]
gi|401660665|gb|EJS78143.1| DNA polymerase I [Bacillus cereus BAG2X1-3]
Length = 877
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 160 YTTEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|423484150|ref|ZP_17460840.1| DNA polymerase I [Bacillus cereus BAG6X1-2]
gi|401139176|gb|EJQ46739.1| DNA polymerase I [Bacillus cereus BAG6X1-2]
Length = 877
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 160 YTTEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|197303212|ref|ZP_03168254.1| hypothetical protein RUMLAC_01936 [Ruminococcus lactaris ATCC
29176]
gi|197297752|gb|EDY32310.1| DNA-directed DNA polymerase [Ruminococcus lactaris ATCC 29176]
Length = 871
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
D +YG + P++F+DV +L+GD +DNIPGV GIG+ A ++I ++
Sbjct: 166 DVKERYG-VTPTEFIDVKALMGDTSDNIPGVPGIGEKTATKIIQEY 210
>gi|408829079|ref|ZP_11213969.1| DNA polymerase I [Streptomyces somaliensis DSM 40738]
Length = 902
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ F E KYG L PSQ+ D +L GD +DN+PG+ G+G+ A + I +FG
Sbjct: 170 LTRFTPEKVREKYG-LSPSQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFG 222
>gi|289423054|ref|ZP_06424870.1| DNA-directed DNA polymerase [Peptostreptococcus anaerobius 653-L]
gi|289156527|gb|EFD05176.1| DNA-directed DNA polymerase [Peptostreptococcus anaerobius 653-L]
Length = 909
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ E +Y +L P QF+D+ L+GDK+DNIPG+ GIG+ ++L+ ++G
Sbjct: 177 YNREGVYERY-QLSPDQFIDLKGLMGDKSDNIPGIPGIGEKTGIKLLLEYG 226
>gi|433461404|ref|ZP_20419014.1| DNA polymerase I [Halobacillus sp. BAB-2008]
gi|432190231|gb|ELK47274.1| DNA polymerase I [Halobacillus sp. BAB-2008]
Length = 879
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 32/42 (76%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E++P Q +D+ +L+GD +DNIPGV G+G+ AV+L+ +F L
Sbjct: 170 EVRPDQIIDLKALMGDSSDNIPGVPGVGEKTAVKLLKQFETL 211
>gi|240142593|ref|YP_002967106.1| DNA polymerase I [Methylobacterium extorquens AM1]
gi|240012540|gb|ACS43765.1| DNA polymerase I [Methylobacterium extorquens AM1]
Length = 957
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+E K+ L+P Q D ++L+GD +DNIPGV GIG A QL+ ++G L
Sbjct: 187 VEAVVAKWEGLQPGQIGDALALIGDTSDNIPGVPGIGLKTAAQLLLEYGSL 237
>gi|443326502|ref|ZP_21055154.1| DNA polymerase I [Xenococcus sp. PCC 7305]
gi|442793891|gb|ELS03326.1| DNA polymerase I [Xenococcus sp. PCC 7305]
Length = 982
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++ P Q VD +L GD +DNIPGV+G+GD AV+LI +F L
Sbjct: 196 KVTPEQVVDYKALCGDASDNIPGVKGVGDKTAVKLIAEFDNL 237
>gi|385676817|ref|ZP_10050745.1| DNA polymerase I [Amycolatopsis sp. ATCC 39116]
Length = 887
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
A KYG L PSQ+ D +L GD +DN+PG+ G+G+ A + I +FG L
Sbjct: 163 AEKYG-LTPSQYPDFAALRGDPSDNLPGIPGVGEKTATKWIQQFGSL 208
>gi|291440261|ref|ZP_06579651.1| DNA polymerase I [Streptomyces ghanaensis ATCC 14672]
gi|291343156|gb|EFE70112.1| DNA polymerase I [Streptomyces ghanaensis ATCC 14672]
Length = 908
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ F E KYG L P+Q+ D +L GD +DN+PG+ G+G+ A + I +FG V
Sbjct: 174 LTRFTPEKVVEKYG-LTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELV 232
Query: 61 ECFSEM 66
E E+
Sbjct: 233 ERVDEV 238
>gi|163782128|ref|ZP_02177127.1| DNA polymerase I 3'-5' exo domain [Hydrogenivirga sp. 128-5-R1-1]
gi|159882660|gb|EDP76165.1| DNA polymerase I 3'-5' exo domain [Hydrogenivirga sp. 128-5-R1-1]
Length = 291
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECF 63
F + K+G + P + D ++LVGDK DN+PGV G+G AV+LI KFG + +E +
Sbjct: 157 FNPDKVKDKFG-VPPQKVADYLALVGDKIDNVPGVRGVGPKTAVKLIEKFGGVPNILERW 215
Query: 64 SE 65
E
Sbjct: 216 EE 217
>gi|160947654|ref|ZP_02094821.1| hypothetical protein PEPMIC_01589 [Parvimonas micra ATCC 33270]
gi|158446788|gb|EDP23783.1| DNA-directed DNA polymerase [Parvimonas micra ATCC 33270]
Length = 888
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+L P Q +DV +L GD +DNIPGV+G+G+ A++LI ++G L
Sbjct: 181 DLSPKQLIDVKALQGDSSDNIPGVKGVGEKTALKLIQEYGNL 222
>gi|441520451|ref|ZP_21002118.1| DNA polymerase I [Gordonia sihwensis NBRC 108236]
gi|441459897|dbj|GAC60079.1| DNA polymerase I [Gordonia sihwensis NBRC 108236]
Length = 923
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
+ F E+ +KYG L PSQ+ D +L GD +DN+PG+ G+G+ A + I ++G
Sbjct: 180 LTRFTPEEVEKKYG-LTPSQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIREYG 232
>gi|372222155|ref|ZP_09500576.1| DNA polymerase I [Mesoflavibacter zeaxanthinifaciens S86]
Length = 944
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+ + +++G +P Q +D + ++GD +DNIPG+ G+GD A + + +FG +
Sbjct: 164 WGIPEVQKRFGVERPEQVIDYLGMMGDASDNIPGLPGVGDKTAKKFLEQFGSM 216
>gi|317499365|ref|ZP_07957633.1| DNA polymerase I [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893334|gb|EFV15548.1| DNA polymerase I [Lachnospiraceae bacterium 5_1_63FAA]
Length = 879
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+D KY ++ P +F+DV +L+GD +DNIPG+ GIG+ A +LI +F
Sbjct: 165 DDVLEKY-QVTPKEFIDVKALMGDASDNIPGIPGIGEKTATKLIKEF 210
>gi|308272139|emb|CBX28746.1| DNA polymerase I [uncultured Desulfobacterium sp.]
Length = 912
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++ F + +G L P Q +DV+ L GD +DN+PGV GIG A+ LI FG +
Sbjct: 180 LDAFRKDFG-LIPEQMIDVMGLSGDTSDNVPGVPGIGPKTALDLIKTFGSM 229
>gi|56807538|ref|ZP_00365463.1| COG0258: 5'-3' exonuclease (including N-terminal domain of PolI)
[Streptococcus pyogenes M49 591]
Length = 410
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 16 LKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
L P+QF+D+ +L+GDK+DNIPGV IG+ ++L+ +FG L
Sbjct: 178 LTPNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSL 218
>gi|443477513|ref|ZP_21067355.1| DNA polymerase I [Pseudanabaena biceps PCC 7429]
gi|443017354|gb|ELS31815.1| DNA polymerase I [Pseudanabaena biceps PCC 7429]
Length = 948
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 18 PSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
P+Q VD +L GD +DNIPGV GIG+ AV+LI ++G L
Sbjct: 184 PTQVVDYKALCGDASDNIPGVRGIGEKTAVKLIEEYGSL 222
>gi|383791874|ref|YP_005476448.1| DNA polymerase I [Spirochaeta africana DSM 8902]
gi|383108408|gb|AFG38741.1| DNA polymerase I [Spirochaeta africana DSM 8902]
Length = 942
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 18 PSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
P Q +D +SLVGD +DNIPGV+GIG AV L+ +F L
Sbjct: 174 PEQILDYLSLVGDSSDNIPGVKGIGAKTAVALLERFTTL 212
>gi|326791154|ref|YP_004308975.1| DNA polymerase I [Clostridium lentocellum DSM 5427]
gi|326541918|gb|ADZ83777.1| DNA polymerase I [Clostridium lentocellum DSM 5427]
Length = 882
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ SF +D YG + P FVDV L+GD +DNI GV GIG+ A++LI ++G +
Sbjct: 159 IESFFAKDVVETYG-VSPIAFVDVKGLMGDASDNIKGVPGIGEKTAIKLIKEYGSI 213
>gi|225848972|ref|YP_002729136.1| DNA polymerase I [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643758|gb|ACN98808.1| DNA polymerase I [Sulfurihydrogenibium azorense Az-Fu1]
Length = 298
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG + P QF+D + LVGD DNIPG++G+G A L+ +FG +
Sbjct: 164 KYG-VSPQQFIDYLVLVGDSIDNIPGIKGVGPKTAASLLQEFGSI 207
>gi|92116074|ref|YP_575803.1| DNA polymerase I [Nitrobacter hamburgensis X14]
gi|91798968|gb|ABE61343.1| DNA polymerase I [Nitrobacter hamburgensis X14]
Length = 1014
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + V+V +L GD DN+PGV GIG A QLIT++G L
Sbjct: 194 LGIAEVIEKFG-VPPEKVVEVQALAGDSVDNVPGVPGIGVKTAAQLITEYGDL 245
>gi|75674555|ref|YP_316976.1| DNA polymerase I [Nitrobacter winogradskyi Nb-255]
gi|74419425|gb|ABA03624.1| DNA polymerase A [Nitrobacter winogradskyi Nb-255]
Length = 1010
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + V+V +L GD DN+PGV GIG A QLIT++G L
Sbjct: 189 LGIAEVIEKFG-VPPEKVVEVQALAGDSVDNVPGVPGIGVKTAAQLITEYGDL 240
>gi|395791668|ref|ZP_10471124.1| DNA polymerase I [Bartonella alsatica IBS 382]
gi|395407971|gb|EJF74591.1| DNA polymerase I [Bartonella alsatica IBS 382]
Length = 968
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G+ + K+G ++P + VD+ +L GD DN+PG+ GIG A QL+ +FG L ++ +
Sbjct: 167 GVSEVIEKWG-VEPEKMVDLQALTGDPTDNVPGIPGIGPKIAAQLLNQFGTLDLLLQHVT 225
Query: 65 EM 66
E+
Sbjct: 226 EI 227
>gi|342217544|ref|ZP_08710186.1| DNA-directed DNA polymerase [Megasphaera sp. UPII 135-E]
gi|341593891|gb|EGS36709.1| DNA-directed DNA polymerase [Megasphaera sp. UPII 135-E]
Length = 856
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 11 RKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
++YG P Q VD+ SL+GD ADNIPGV G+G+ A +LI +FG +
Sbjct: 167 KEYG-YTPEQVVDMKSLMGDTADNIPGVPGVGEKTARKLIDEFGSI 211
>gi|453382177|dbj|GAC83384.1| DNA polymerase I [Gordonia paraffinivorans NBRC 108238]
Length = 915
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ F E+ +KYG L P+Q+ D +L GD +DN+PG+ G+G+ A + I ++G L V
Sbjct: 178 LTRFTPEEVEKKYG-LTPTQYPDYAALRGDPSDNLPGIPGVGEKTASKWIREYGSLAALV 236
Query: 61 ECFSEM 66
+ E+
Sbjct: 237 DHVDEV 242
>gi|438002756|ref|YP_007272499.1| DNA polymerase I [Tepidanaerobacter acetatoxydans Re1]
gi|432179550|emb|CCP26523.1| DNA polymerase I [Tepidanaerobacter acetatoxydans Re1]
Length = 347
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M ++ E +YG ++P D+ L+GDK+DNIPGV G+G+ A +LI +F L
Sbjct: 156 METYDTEKVKSRYG-IRPEAVADMKGLMGDKSDNIPGVPGVGEKTAAKLIQEFKTL 210
>gi|403388340|ref|ZP_10930397.1| DNA polymerase I [Clostridium sp. JC122]
Length = 874
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+YG + P +F+DV L+GDK+DNIPGV GIG+ A +LI +F
Sbjct: 169 EYG-VTPEEFIDVKGLMGDKSDNIPGVPGIGEKTAFKLIKEF 209
>gi|387131167|ref|YP_006294057.1| DNA polymerase I [Methylophaga sp. JAM7]
gi|386272456|gb|AFJ03370.1| DNA polymerase I [Methylophaga sp. JAM7]
Length = 904
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 12 KYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
K+G LKP Q +D ++L+GDK DNIPGVE +G A +L+ ++ L +E +E+
Sbjct: 167 KFG-LKPDQIIDYLALMGDKVDNIPGVESVGPKTASKLLNQYHSLQGVIENANEV 220
>gi|339445483|ref|YP_004711487.1| hypothetical protein EGYY_19930 [Eggerthella sp. YY7918]
gi|338905235|dbj|BAK45086.1| hypothetical protein EGYY_19930 [Eggerthella sp. YY7918]
Length = 875
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+A +G E+ +YG + P+Q D + L GD +DNIPGV GIG+ A +L+ ++G L
Sbjct: 158 VAIYGPEEVLDRYG-VTPAQVPDFLGLKGDSSDNIPGVPGIGEKGAAKLLQQYGSL 212
>gi|94971505|ref|YP_593553.1| DNA polymerase I [Candidatus Koribacter versatilis Ellin345]
gi|94553555|gb|ABF43479.1| DNA polymerase I [Candidatus Koribacter versatilis Ellin345]
Length = 929
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 18 PSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
P + VDV++L GD DN+PG GIGD +VQLI +FG +
Sbjct: 223 PERVVDVMALRGDSIDNVPGAPGIGDKGSVQLIQRFGTV 261
>gi|89100389|ref|ZP_01173253.1| DNA polymerase I [Bacillus sp. NRRL B-14911]
gi|89084908|gb|EAR64045.1| DNA polymerase I [Bacillus sp. NRRL B-14911]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
E KYG L P Q +D+ L+GD +DNIPGV G+G+ A++L+ +F L
Sbjct: 163 EHIREKYG-LSPGQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKEFETL 211
>gi|153807182|ref|ZP_01959850.1| hypothetical protein BACCAC_01460 [Bacteroides caccae ATCC 43185]
gi|423220600|ref|ZP_17207095.1| DNA polymerase I [Bacteroides caccae CL03T12C61]
gi|149130302|gb|EDM21512.1| DNA-directed DNA polymerase [Bacteroides caccae ATCC 43185]
gi|392623677|gb|EIY17780.1| DNA polymerase I [Bacteroides caccae CL03T12C61]
Length = 949
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+++ K+ P+Q +D++ L+GD +DNIPG G+G+ A +LI +FG +
Sbjct: 164 GVDEVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI 215
>gi|428218098|ref|YP_007102563.1| DNA polymerase I [Pseudanabaena sp. PCC 7367]
gi|427989880|gb|AFY70135.1| DNA polymerase I [Pseudanabaena sp. PCC 7367]
Length = 972
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
M F + K G + P Q VD +L GD +DNIPGV+GIG A +L+ ++G L
Sbjct: 164 MGEFHAAEVVEKLG-ITPEQVVDYKALCGDSSDNIPGVKGIGSKTAAKLLAEYGSL 218
>gi|403669467|ref|ZP_10934671.1| 5'-3' exonuclease [Kurthia sp. JC8E]
Length = 292
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECF 63
+ + F +YG ++P+QF DV + +GD +D PGV+GIG A+ LI ++G + +
Sbjct: 163 YNQQRFEEEYG-IQPAQFADVKAFMGDSSDGYPGVKGIGPKTALSLIQQYGSVDGVLNAI 221
Query: 64 SEM 66
SE+
Sbjct: 222 SEL 224
>gi|392390036|ref|YP_006426639.1| DNA polymerase I [Ornithobacterium rhinotracheale DSM 15997]
gi|390521114|gb|AFL96845.1| DNA polymerase I [Ornithobacterium rhinotracheale DSM 15997]
Length = 931
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+G+++ +G P Q +D + ++GD ADNIPG+ GIG A + I K+G +
Sbjct: 167 WGVKEVQENFGVKDPKQIIDYLGMMGDSADNIPGIPGIGPKTAQKFIEKYGSM 219
>gi|325294546|ref|YP_004281060.1| DNA polymerase I [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064994|gb|ADY73001.1| DNA polymerase I [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 838
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ + F KYG ++P Q D LVGD DNIPGV IG+ A +LI +FG L
Sbjct: 160 YDLVSFKEKYG-IEPEQIPDFFGLVGDSVDNIPGVPSIGEKTAQKLIAEFGNL 211
>gi|423377571|ref|ZP_17354855.1| DNA polymerase I [Bacillus cereus BAG1O-2]
gi|423547872|ref|ZP_17524230.1| DNA polymerase I [Bacillus cereus HuB5-5]
gi|423622339|ref|ZP_17598117.1| DNA polymerase I [Bacillus cereus VD148]
gi|401178309|gb|EJQ85489.1| DNA polymerase I [Bacillus cereus HuB5-5]
gi|401261479|gb|EJR67639.1| DNA polymerase I [Bacillus cereus VD148]
gi|401638420|gb|EJS56170.1| DNA polymerase I [Bacillus cereus BAG1O-2]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|423449152|ref|ZP_17426031.1| DNA polymerase I [Bacillus cereus BAG5O-1]
gi|423463743|ref|ZP_17440511.1| DNA polymerase I [Bacillus cereus BAG6O-1]
gi|423541641|ref|ZP_17518032.1| DNA polymerase I [Bacillus cereus HuB4-10]
gi|401128601|gb|EJQ36290.1| DNA polymerase I [Bacillus cereus BAG5O-1]
gi|401171174|gb|EJQ78407.1| DNA polymerase I [Bacillus cereus HuB4-10]
gi|402421287|gb|EJV53547.1| DNA polymerase I [Bacillus cereus BAG6O-1]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|395782170|ref|ZP_10462574.1| DNA polymerase I [Bartonella rattimassiliensis 15908]
gi|395419109|gb|EJF85410.1| DNA polymerase I [Bartonella rattimassiliensis 15908]
Length = 967
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFS 64
G+ + K+G + P + +D+ +L+GD DN+PG+ GIG A QL+ +FG L ++ +
Sbjct: 167 GISEVIEKWG-VAPERMIDLQALIGDSTDNVPGIPGIGPKIAAQLLNQFGSLDLLLQHVT 225
Query: 65 EM 66
E+
Sbjct: 226 EI 227
>gi|374606089|ref|ZP_09678986.1| DNA polymerase i [Paenibacillus dendritiformis C454]
gi|374388316|gb|EHQ59741.1| DNA polymerase i [Paenibacillus dendritiformis C454]
Length = 889
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 8 DFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ KYG LKP Q +D+ L+GD +DNIPGV GIG+ A++L+ ++
Sbjct: 164 EIEEKYG-LKPEQIIDLKGLMGDTSDNIPGVPGIGEKTALKLLHQY 208
>gi|395764875|ref|ZP_10445495.1| DNA polymerase I [Bartonella sp. DB5-6]
gi|395413692|gb|EJF80154.1| DNA polymerase I [Bartonella sp. DB5-6]
Length = 968
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + VD+ +L+GD+ DN+PG+ GIG A QL+ +FG L
Sbjct: 167 GISEVIEKWG-VVPEKMVDLQALIGDQTDNVPGIPGIGPKIAAQLLDQFGSL 217
>gi|418062405|ref|ZP_12700193.1| 5'-3' exonuclease, resolvase-like domain-containing protein,
partial [Methylobacterium extorquens DSM 13060]
gi|373564031|gb|EHP90172.1| 5'-3' exonuclease, resolvase-like domain-containing protein,
partial [Methylobacterium extorquens DSM 13060]
Length = 517
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+E K+ L+P Q D ++L+GD +DNIPGV GIG A QL+ ++G L
Sbjct: 187 VEAVVAKWEGLQPGQIGDALALIGDTSDNIPGVPGIGLKTAAQLLLEYGSL 237
>gi|291525363|emb|CBK90950.1| DNA polymerase I [Eubacterium rectale DSM 17629]
gi|291527050|emb|CBK92636.1| DNA polymerase I [Eubacterium rectale M104/1]
Length = 903
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ ++ D KYG + P +F+DV +L GD +DNIPGV GIG+ A LI K+
Sbjct: 159 IENYNTADVIEKYG-VTPKEFIDVKALQGDTSDNIPGVPGIGEKTAGALIAKY 210
>gi|238923922|ref|YP_002937438.1| DNA polymerase I [Eubacterium rectale ATCC 33656]
gi|238875597|gb|ACR75304.1| DNA polymerase I [Eubacterium rectale ATCC 33656]
Length = 903
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ ++ D KYG + P +F+DV +L GD +DNIPGV GIG+ A LI K+
Sbjct: 159 IENYNTADVIEKYG-VTPKEFIDVKALQGDTSDNIPGVPGIGEKTAGALIAKY 210
>gi|449102534|ref|ZP_21739282.1| DNA polymerase I [Treponema denticola AL-2]
gi|448966123|gb|EMB46781.1| DNA polymerase I [Treponema denticola AL-2]
Length = 943
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
FG E+ ++G + P +D++SL+GD ADN+PG++G+G AV+L+ ++ L
Sbjct: 161 FGAENVKEEWG-VYPDGMLDLLSLIGDSADNVPGIKGVGPKTAVKLLEEYKTL 212
>gi|414165088|ref|ZP_11421335.1| DNA polymerase I [Afipia felis ATCC 53690]
gi|410882868|gb|EKS30708.1| DNA polymerase I [Afipia felis ATCC 53690]
Length = 1007
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + V+V +L GD DN+PGV GIG A QLIT++G L
Sbjct: 187 LGIPEVIEKFG-VPPEKVVEVQALAGDSVDNVPGVPGIGIKTAAQLITEYGDL 238
>gi|365896869|ref|ZP_09434920.1| DNA polymerase I (POL I) [Bradyrhizobium sp. STM 3843]
gi|365422366|emb|CCE07462.1| DNA polymerase I (POL I) [Bradyrhizobium sp. STM 3843]
Length = 1025
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + V+V +L GD DN+PGV GIG A QLIT++G L
Sbjct: 195 GIAEVIEKFG-VPPEKVVEVQALAGDSTDNVPGVPGIGIKTAAQLITEYGDL 245
>gi|299132621|ref|ZP_07025816.1| DNA polymerase I [Afipia sp. 1NLS2]
gi|298592758|gb|EFI52958.1| DNA polymerase I [Afipia sp. 1NLS2]
Length = 1008
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + V+V +L GD DN+PGV GIG A QLIT++G L
Sbjct: 187 LGIPEVIEKFG-VPPEKVVEVQALAGDSVDNVPGVPGIGIKTAAQLITEYGDL 238
>gi|114328629|ref|YP_745786.1| DNA polymerase I [Granulibacter bethesdensis CGDNIH1]
gi|114316803|gb|ABI62863.1| DNA polymerase I [Granulibacter bethesdensis CGDNIH1]
Length = 933
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 3 SFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+ G + K+G + P + +DV +L+GD DN+PGV GIG A QLI ++G L
Sbjct: 167 TIGPAEVMEKFG-VTPEKMIDVQALMGDSVDNVPGVPGIGPKTAAQLINEYGDL 219
>gi|386722145|ref|YP_006188471.1| protein PolA [Paenibacillus mucilaginosus K02]
gi|384089270|gb|AFH60706.1| PolA [Paenibacillus mucilaginosus K02]
Length = 898
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG LKP Q +D+ L+GD +DNIPG+ G+G+ A++L+ ++G L
Sbjct: 166 GEKYG-LKPLQIIDLKGLMGDASDNIPGIPGVGEKTALKLLHEYGSL 211
>gi|377567701|ref|ZP_09796908.1| DNA polymerase I [Gordonia terrae NBRC 100016]
gi|377535099|dbj|GAB42073.1| DNA polymerase I [Gordonia terrae NBRC 100016]
Length = 926
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
+ F E+ +KYG L P+Q+ D +L GD +DN+PG+ G+G+ A + I ++G L V
Sbjct: 189 LTRFTPEEVEKKYG-LTPTQYPDYAALRGDPSDNLPGIPGVGEKTASKWIREYGSLAALV 247
Query: 61 ECFSEM 66
+ E+
Sbjct: 248 DHVDEV 253
>gi|357420033|ref|YP_004933025.1| DNA polymerase I [Thermovirga lienii DSM 17291]
gi|355397499|gb|AER66928.1| DNA polymerase I [Thermovirga lienii DSM 17291]
Length = 849
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 9 FARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
F +YG P+ F D ++LVGDK DNIPGV GIGD A L+ ++ L
Sbjct: 166 FIEEYG-FPPTSFPDYLALVGDKVDNIPGVRGIGDKTARALLKEYKTL 212
>gi|337745573|ref|YP_004639735.1| protein PolA [Paenibacillus mucilaginosus KNP414]
gi|336296762|gb|AEI39865.1| PolA [Paenibacillus mucilaginosus KNP414]
Length = 904
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG LKP Q +D+ L+GD +DNIPG+ G+G+ A++L+ ++G L
Sbjct: 172 GEKYG-LKPLQIIDLKGLMGDASDNIPGIPGVGEKTALKLLHEYGSL 217
>gi|423440678|ref|ZP_17417584.1| DNA polymerase I [Bacillus cereus BAG4X2-1]
gi|423533095|ref|ZP_17509513.1| DNA polymerase I [Bacillus cereus HuB2-9]
gi|402418809|gb|EJV51098.1| DNA polymerase I [Bacillus cereus BAG4X2-1]
gi|402464328|gb|EJV96024.1| DNA polymerase I [Bacillus cereus HuB2-9]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|423615029|ref|ZP_17590863.1| DNA polymerase I [Bacillus cereus VD115]
gi|401261885|gb|EJR68036.1| DNA polymerase I [Bacillus cereus VD115]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|379719558|ref|YP_005311689.1| protein PolA [Paenibacillus mucilaginosus 3016]
gi|378568230|gb|AFC28540.1| PolA [Paenibacillus mucilaginosus 3016]
Length = 903
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 10 ARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
KYG LKP Q +D+ L+GD +DNIPG+ G+G+ A++L+ ++G L
Sbjct: 172 GEKYG-LKPLQIIDLKGLMGDASDNIPGIPGVGEKTALKLLHEYGSL 217
>gi|229105215|ref|ZP_04235864.1| DNA polymerase I [Bacillus cereus Rock3-28]
gi|228678141|gb|EEL32369.1| DNA polymerase I [Bacillus cereus Rock3-28]
Length = 890
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 176 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 221
>gi|229118078|ref|ZP_04247437.1| DNA polymerase I [Bacillus cereus Rock1-3]
gi|228665301|gb|EEL20784.1| DNA polymerase I [Bacillus cereus Rock1-3]
Length = 890
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 176 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 221
>gi|395788138|ref|ZP_10467714.1| DNA polymerase I [Bartonella birtlesii LL-WM9]
gi|395409920|gb|EJF76505.1| DNA polymerase I [Bartonella birtlesii LL-WM9]
Length = 968
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+ + K+G + P + VD+ +L+GD DN+PG+ GIG A QL+ +FG L
Sbjct: 167 GISEVIEKWG-VAPEKMVDLQALIGDTTDNVPGIPGIGPKIAAQLLDQFGSL 217
>gi|299822773|ref|ZP_07054659.1| DNA-directed DNA polymerase I [Listeria grayi DSM 20601]
gi|299816302|gb|EFI83540.1| DNA-directed DNA polymerase I [Listeria grayi DSM 20601]
Length = 903
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNV 60
E KY +L P+Q +D+ L+GD +DNIPG+ G+G+ A++L+ ++G V +V
Sbjct: 188 ESLQEKY-QLTPAQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHQYGGTVESV 240
>gi|282858640|ref|ZP_06267798.1| DNA-directed DNA polymerase [Prevotella bivia JCVIHMP010]
gi|424900033|ref|ZP_18323575.1| DNA polymerase I [Prevotella bivia DSM 20514]
gi|282588558|gb|EFB93705.1| DNA-directed DNA polymerase [Prevotella bivia JCVIHMP010]
gi|388592233|gb|EIM32472.1| DNA polymerase I [Prevotella bivia DSM 20514]
Length = 920
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G KYG +Q VD+++L+GD ADN PG G+G+ A +LI +FG +
Sbjct: 160 GEPQIQEKYGIPSAAQVVDLLALMGDSADNFPGCPGVGEKTAAKLINEFGSI 211
>gi|164687872|ref|ZP_02211900.1| hypothetical protein CLOBAR_01516 [Clostridium bartlettii DSM
16795]
gi|164603147|gb|EDQ96612.1| DNA-directed DNA polymerase [Clostridium bartlettii DSM 16795]
Length = 882
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 15 ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGMLVFNVECFSEM 66
E+ P+QF+D+ L+GDK+DNIPGV G+G+ ++L+ ++ + +E E+
Sbjct: 170 EMTPTQFIDLKGLMGDKSDNIPGVPGVGEKTGIKLLKQYSTIENLIEHTDEL 221
>gi|407707101|ref|YP_006830686.1| DeoR family transcriptional regulator [Bacillus thuringiensis MC28]
gi|407384786|gb|AFU15287.1| DNA polymerase I [Bacillus thuringiensis MC28]
Length = 890
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 176 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 221
>gi|423660570|ref|ZP_17635739.1| DNA polymerase I [Bacillus cereus VDM022]
gi|401302478|gb|EJS08057.1| DNA polymerase I [Bacillus cereus VDM022]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|330444148|ref|YP_004377134.1| DNA polymerase I [Chlamydophila pecorum E58]
gi|328807258|gb|AEB41431.1| DNA polymerase I [Chlamydophila pecorum E58]
Length = 878
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFG 54
FG E+ +YG + P D ++LVGD +DNIPGV+G G +A L+ +FG
Sbjct: 165 FGEEEVLERYG-VPPKCIPDYLALVGDTSDNIPGVKGCGPKKAAALLQQFG 214
>gi|229099047|ref|ZP_04229981.1| DNA polymerase I [Bacillus cereus Rock3-29]
gi|228684275|gb|EEL38219.1| DNA polymerase I [Bacillus cereus Rock3-29]
Length = 890
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 176 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 221
>gi|409400480|ref|ZP_11250543.1| DNA polymerase I [Acidocella sp. MX-AZ02]
gi|409130543|gb|EKN00301.1| DNA polymerase I [Acidocella sp. MX-AZ02]
Length = 901
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G+E+ +K+G + P + ++V +L+GD DN+PGV GIG A LI ++G L
Sbjct: 155 GLEEVEKKFG-VTPDKVIEVQALIGDSVDNVPGVPGIGPKGAAALIGEYGTL 205
>gi|347752916|ref|YP_004860481.1| DNA polymerase I [Bacillus coagulans 36D1]
gi|347585434|gb|AEP01701.1| DNA polymerase I [Bacillus coagulans 36D1]
Length = 875
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 1 MASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
M ++ KYG L P Q +D+ L+GD +DNIPGV GIG+ A++L+ +F
Sbjct: 156 MEAYTPAHVEEKYG-LTPHQIIDMKGLMGDSSDNIPGVPGIGEKTAIKLLKQF 207
>gi|229076089|ref|ZP_04209057.1| DNA polymerase I [Bacillus cereus Rock4-18]
gi|228706952|gb|EEL59157.1| DNA polymerase I [Bacillus cereus Rock4-18]
Length = 890
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 176 EALFEKY-NLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 221
>gi|423512686|ref|ZP_17489217.1| DNA polymerase I [Bacillus cereus HuA2-1]
gi|402447610|gb|EJV79460.1| DNA polymerase I [Bacillus cereus HuA2-1]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|423478724|ref|ZP_17455439.1| DNA polymerase I [Bacillus cereus BAG6X1-1]
gi|402426755|gb|EJV58870.1| DNA polymerase I [Bacillus cereus BAG6X1-1]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|423557833|ref|ZP_17534135.1| DNA polymerase I [Bacillus cereus MC67]
gi|401192370|gb|EJQ99386.1| DNA polymerase I [Bacillus cereus MC67]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|423389109|ref|ZP_17366335.1| DNA polymerase I [Bacillus cereus BAG1X1-3]
gi|423417504|ref|ZP_17394593.1| DNA polymerase I [Bacillus cereus BAG3X2-1]
gi|401107783|gb|EJQ15728.1| DNA polymerase I [Bacillus cereus BAG3X2-1]
gi|401642384|gb|EJS60095.1| DNA polymerase I [Bacillus cereus BAG1X1-3]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
>gi|393765075|ref|ZP_10353668.1| DNA polymerase I [Methylobacterium sp. GXF4]
gi|392729499|gb|EIZ86771.1| DNA polymerase I [Methylobacterium sp. GXF4]
Length = 1050
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 6 MEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
+E K+ L+P+Q D ++L+GD +DN+PGV GIG A LI +FG L
Sbjct: 192 VEAIIAKWEGLQPNQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEFGSL 242
>gi|229087143|ref|ZP_04219293.1| DNA polymerase I [Bacillus cereus Rock3-44]
gi|228696211|gb|EEL49046.1| DNA polymerase I [Bacillus cereus Rock3-44]
Length = 884
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 4 FGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
+ E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 167 YTTEALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 215
>gi|317133543|ref|YP_004092857.1| DNA polymerase I [Ethanoligenens harbinense YUAN-3]
gi|315471522|gb|ADU28126.1| DNA polymerase I [Ethanoligenens harbinense YUAN-3]
Length = 870
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 13 YGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
YG ++P Q +DV +L+GD +DNIPGV G+G+ A+ LI +G L
Sbjct: 169 YG-VEPRQMIDVKALMGDTSDNIPGVAGVGEKTALSLIRTYGTL 211
>gi|260753224|ref|YP_003226117.1| DNA polymerase I [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258552587|gb|ACV75533.1| DNA polymerase I [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 921
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 5 GMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGML 56
G E +K+G + P + D+++L+GD ADNIPGV G+G A +LI ++G L
Sbjct: 167 GSEQVVKKFG-VVPEKLGDLLALMGDSADNIPGVPGVGPKTASRLINEYGNL 217
>gi|423591440|ref|ZP_17567471.1| DNA polymerase I [Bacillus cereus VD048]
gi|423598120|ref|ZP_17574120.1| DNA polymerase I [Bacillus cereus VD078]
gi|401232808|gb|EJR39306.1| DNA polymerase I [Bacillus cereus VD048]
gi|401237581|gb|EJR44032.1| DNA polymerase I [Bacillus cereus VD078]
Length = 877
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 7 EDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKF 53
E KY L P Q +D+ L+GD++DNIPGV G+G+ A++L+T+F
Sbjct: 163 EALFEKY-SLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQF 208
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.142 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 948,332,003
Number of Sequences: 23463169
Number of extensions: 28612960
Number of successful extensions: 76046
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5401
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 70598
Number of HSP's gapped (non-prelim): 5551
length of query: 66
length of database: 8,064,228,071
effective HSP length: 38
effective length of query: 28
effective length of database: 7,172,627,649
effective search space: 200833574172
effective search space used: 200833574172
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)