Query 035377
Match_columns 66
No_of_seqs 174 out of 1066
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 03:28:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035377.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035377hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rcm_A TATD family hydrolase; 99.9 4E-24 1.4E-28 132.9 6.3 66 1-66 1-70 (287)
2 3ipw_A Hydrolase TATD family p 99.9 8.5E-24 2.9E-28 133.5 5.4 66 1-66 26-106 (325)
3 3gg7_A Uncharacterized metallo 99.9 1.1E-22 3.9E-27 124.8 3.9 62 1-66 1-62 (254)
4 3e2v_A 3'-5'-exonuclease; stru 99.8 1.7E-21 5.8E-26 125.7 5.9 66 1-66 12-92 (401)
5 2xio_A Putative deoxyribonucle 99.8 3.1E-21 1.1E-25 119.6 6.3 66 1-66 1-76 (301)
6 1zzm_A Putative deoxyribonucle 99.8 1.2E-20 4.2E-25 114.0 7.7 66 1-66 3-68 (259)
7 1xwy_A DNAse TATD, deoxyribonu 99.8 1.2E-20 4.2E-25 114.2 7.0 66 1-66 3-68 (264)
8 2y1h_A Putative deoxyribonucle 99.8 1.9E-20 6.4E-25 113.9 7.3 66 1-66 4-70 (272)
9 1yix_A Deoxyribonuclease YCFH; 99.8 2.5E-19 8.7E-24 108.1 6.4 66 1-66 1-69 (265)
10 1j6o_A TATD-related deoxyribon 99.8 5.3E-19 1.8E-23 107.9 5.4 64 3-66 13-76 (268)
11 2gzx_A Putative TATD related D 99.7 2.8E-17 9.5E-22 99.0 7.2 65 2-66 1-65 (265)
12 3guw_A Uncharacterized protein 99.7 2.9E-18 9.9E-23 105.4 2.0 60 2-66 1-75 (261)
13 4i6k_A Amidohydrolase family p 99.6 1E-14 3.5E-19 89.9 6.8 66 1-66 25-105 (294)
14 2ob3_A Parathion hydrolase; me 99.5 5.3E-15 1.8E-19 92.8 2.3 65 1-65 15-98 (330)
15 3cjp_A Predicted amidohydrolas 99.5 1.2E-13 4E-18 83.8 6.0 60 2-66 3-96 (272)
16 2vc7_A Aryldialkylphosphatase; 99.4 5.7E-14 1.9E-18 86.5 3.2 66 1-66 16-99 (314)
17 2f6k_A Metal-dependent hydrola 99.4 2.2E-13 7.6E-18 83.3 5.3 65 1-65 1-98 (307)
18 2ffi_A 2-pyrone-4,6-dicarboxyl 99.4 3E-13 1E-17 82.3 3.7 66 1-66 12-92 (288)
19 2dvt_A Thermophilic reversible 99.3 7E-13 2.4E-17 81.7 3.4 65 2-66 3-104 (327)
20 4do7_A Amidohydrolase 2; enzym 99.2 4.3E-11 1.5E-15 73.9 7.8 65 1-65 3-84 (303)
21 3irs_A Uncharacterized protein 99.1 2.2E-10 7.4E-15 70.6 7.1 66 1-66 3-102 (291)
22 1bf6_A Phosphotriesterase homo 99.0 3.1E-10 1.1E-14 68.8 2.7 65 2-66 6-90 (291)
23 2hbv_A 2-amino-3-carboxymucona 98.8 2.2E-08 7.6E-13 62.2 6.7 48 19-66 60-124 (334)
24 2wm1_A 2-amino-3-carboxymucona 98.6 1.9E-07 6.4E-12 57.9 7.1 48 19-66 56-120 (336)
25 3gtx_A Organophosphorus hydrol 98.5 6E-08 2E-12 61.3 3.2 46 21-66 67-115 (339)
26 2gwg_A 4-oxalomesaconate hydra 98.4 3.1E-07 1.1E-11 57.4 4.2 45 21-65 53-114 (350)
27 3nqb_A Adenine deaminase 2; PS 98.2 3E-06 1E-10 56.9 5.2 63 2-66 90-160 (608)
28 3hm7_A Allantoinase; metallo-d 98.1 9E-06 3.1E-10 51.9 6.0 64 2-65 60-134 (448)
29 4d9a_A 2-pyrone-4,6-dicarbaxyl 98.0 1.7E-05 5.8E-10 49.1 6.4 64 2-65 26-105 (303)
30 2z00_A Dihydroorotase; zinc bi 98.0 1.1E-05 3.9E-10 50.6 5.4 63 3-65 51-123 (426)
31 2ics_A Adenine deaminase; TIM 98.0 3.9E-06 1.3E-10 52.0 3.1 61 2-65 55-124 (379)
32 3k2g_A Resiniferatoxin-binding 97.9 9.4E-06 3.2E-10 51.8 3.5 46 19-64 88-136 (364)
33 2yxo_A Histidinol phosphatase; 97.8 0.00011 3.7E-09 44.0 6.8 35 3-37 1-36 (267)
34 2yb1_A Amidohydrolase; HET: AM 97.7 0.00019 6.3E-09 44.3 7.6 54 1-54 1-55 (292)
35 3ij6_A Uncharacterized metal-d 97.7 2.2E-05 7.4E-10 48.8 2.9 65 1-65 3-105 (312)
36 1m65_A Hypothetical protein YC 97.6 8.9E-05 3E-09 44.0 4.7 37 1-37 1-38 (245)
37 3nur_A Amidohydrolase; TIM bar 97.6 0.00013 4.3E-09 46.3 5.4 48 18-65 74-137 (357)
38 3rhg_A Putative phophotriester 97.3 0.00017 6E-09 46.0 2.9 43 22-64 80-126 (365)
39 1xrt_A Dihydroorotase, dhoase; 97.2 0.00066 2.2E-08 43.5 5.1 63 3-65 102-174 (467)
40 3e38_A Two-domain protein cont 97.1 0.0012 4.2E-08 41.9 5.8 54 1-54 18-84 (343)
41 3mpg_A Dihydroorotase, dhoase; 97.0 0.0021 7.3E-08 40.7 6.3 54 2-55 54-115 (428)
42 3qy7_A Tyrosine-protein phosph 97.0 0.0054 1.9E-07 37.4 7.4 34 3-36 1-39 (262)
43 2vm8_A Dihydropyrimidinase-rel 96.9 0.002 6.9E-08 41.6 5.2 36 3-38 80-119 (501)
44 2anu_A Hypothetical protein TM 96.9 0.0017 6E-08 39.0 4.6 35 3-37 21-55 (255)
45 3o0f_A Putative metal-dependen 96.8 0.0063 2.2E-07 38.0 6.6 53 2-54 13-66 (301)
46 3dcp_A Histidinol-phosphatase; 96.7 0.012 3.9E-07 36.3 7.6 34 3-36 2-37 (283)
47 3gri_A Dihydroorotase, dhoase; 96.7 0.0059 2E-07 38.8 6.2 53 2-54 53-113 (424)
48 3b0x_A DNA polymerase beta fam 96.7 0.0076 2.6E-07 40.3 6.8 36 2-37 337-372 (575)
49 2wje_A CPS4B, tyrosine-protein 96.6 0.0028 9.6E-08 37.9 4.0 35 2-36 4-43 (247)
50 1gkr_A Hydantoinase, non-ATP d 96.5 0.0067 2.3E-07 38.3 5.7 52 3-54 56-117 (458)
51 1gkp_A Hydantoinase; hydrolase 96.3 0.0075 2.6E-07 38.1 4.9 37 3-39 54-94 (458)
52 2ftw_A Dihydropyrimidine amido 96.3 0.0066 2.3E-07 39.7 4.7 36 3-38 62-101 (521)
53 4f0r_A 5-methylthioadenosine/S 96.2 0.0043 1.5E-07 39.2 3.5 40 22-64 115-155 (447)
54 2q01_A Uronate isomerase; stru 96.1 0.0043 1.5E-07 41.3 3.2 56 1-56 35-109 (497)
55 1j5s_A Uronate isomerase; TM00 96.1 0.0039 1.4E-07 41.1 2.9 55 1-56 36-103 (463)
56 3iac_A Glucuronate isomerase; 96.1 0.0043 1.5E-07 41.1 3.1 56 1-56 30-98 (473)
57 2w9m_A Polymerase X; SAXS, DNA 95.9 0.012 4.2E-07 39.4 4.6 34 3-36 328-361 (578)
58 3iv8_A N-acetylglucosamine-6-p 95.9 0.0072 2.5E-07 38.7 3.3 49 2-50 57-113 (381)
59 3sfw_A Dihydropyrimidinase; hy 95.5 0.036 1.2E-06 35.5 5.6 37 2-38 53-93 (461)
60 3feq_A Putative amidohydrolase 95.5 0.018 6.1E-07 35.9 4.0 47 3-49 61-120 (423)
61 2vr2_A Dihydropyrimidinase; hy 95.4 0.026 8.8E-07 37.1 4.7 36 3-38 85-124 (541)
62 2qee_A BH0493 protein; amidohy 95.1 0.0095 3.2E-07 39.1 1.8 32 1-32 22-64 (437)
63 1o12_A N-acetylglucosamine-6-p 94.9 0.048 1.6E-06 34.2 4.8 36 3-38 57-94 (376)
64 2hnh_A DNA polymerase III alph 94.9 0.082 2.8E-06 37.5 6.1 60 3-63 6-68 (910)
65 3f2b_A DNA-directed DNA polyme 94.6 0.1 3.6E-06 37.5 6.2 61 1-62 114-177 (1041)
66 3e74_A Allantoinase; (beta/alp 94.6 0.15 5.2E-06 33.0 6.6 37 2-38 74-112 (473)
67 2gwn_A Dihydroorotase; zinc-bi 94.6 0.19 6.6E-06 32.0 7.0 37 2-38 61-99 (452)
68 2r8c_A Putative amidohydrolase 94.6 0.047 1.6E-06 34.3 4.0 47 3-49 61-120 (426)
69 3gnh_A L-lysine, L-arginine ca 94.5 0.041 1.4E-06 34.0 3.7 38 3-40 60-111 (403)
70 4dzh_A Amidohydrolase; adenosi 94.2 0.18 6.2E-06 32.2 6.2 11 2-12 74-84 (472)
71 3h4u_A Amidohydrolase; signatu 94.1 0.083 2.8E-06 33.6 4.4 32 23-54 139-173 (479)
72 1e9y_B Urease subunit beta; hy 93.8 0.13 4.5E-06 34.4 5.1 30 3-39 132-161 (569)
73 2vhl_A N-acetylglucosamine-6-p 93.6 0.063 2.2E-06 33.4 3.3 37 2-38 58-99 (396)
74 1v77_A PH1877P, hypothetical p 93.6 0.051 1.7E-06 32.0 2.7 25 1-35 7-31 (212)
75 2hpi_A DNA polymerase III alph 93.6 0.41 1.4E-05 35.1 7.6 62 1-63 5-71 (1220)
76 3dc8_A Dihydropyrimidinase; TI 93.6 0.23 8E-06 32.4 5.9 36 3-38 52-91 (490)
77 2z26_A Dihydroorotase, dhoase; 93.5 0.36 1.2E-05 30.0 6.5 46 3-52 12-63 (347)
78 2fty_A Dihydropyrimidinase; al 93.5 0.29 9.9E-06 32.5 6.3 38 2-39 56-98 (559)
79 2i9u_A Cytosine/guanine deamin 93.0 0.25 8.6E-06 31.1 5.3 31 24-54 120-151 (439)
80 2ood_A BLR3880 protein; PSI-II 92.8 0.22 7.5E-06 31.9 4.8 32 23-54 124-156 (475)
81 3lnp_A Amidohydrolase family p 92.7 0.13 4.3E-06 32.7 3.7 39 23-64 138-177 (468)
82 4ac7_C Urease subunit alpha; h 92.5 0.14 4.8E-06 34.5 3.8 27 3-36 133-159 (570)
83 4ubp_C Protein (urease (chain 92.5 0.14 4.8E-06 34.5 3.8 27 3-36 133-159 (570)
84 2qs8_A XAA-Pro dipeptidase; am 92.5 0.38 1.3E-05 30.0 5.6 38 2-39 64-115 (418)
85 1nfg_A D-hydantoinase; TIM bar 92.3 0.16 5.6E-06 32.0 3.8 38 2-39 52-93 (457)
86 3tn4_A Phosphotriesterase; lac 92.1 0.28 9.4E-06 31.3 4.7 64 2-65 52-134 (360)
87 2paj_A Putative cytosine/guani 92.1 0.23 7.8E-06 31.7 4.3 32 24-55 124-161 (492)
88 2vun_A Enamidase; nicotinate d 92.0 0.097 3.3E-06 32.3 2.4 37 2-38 62-100 (386)
89 3inp_A D-ribulose-phosphate 3- 91.8 0.44 1.5E-05 28.9 5.1 56 3-65 88-143 (246)
90 4inf_A Metal-dependent hydrola 91.8 0.34 1.2E-05 30.8 4.8 45 22-66 95-156 (373)
91 3ooq_A Amidohydrolase; structu 91.5 0.17 5.7E-06 31.6 3.1 17 21-37 102-118 (396)
92 1p1m_A Hypothetical protein TM 91.2 0.34 1.2E-05 30.1 4.3 18 24-41 101-118 (406)
93 3ls9_A Triazine hydrolase; atr 91.2 0.55 1.9E-05 29.5 5.3 11 2-12 58-68 (456)
94 3ovp_A Ribulose-phosphate 3-ep 91.1 0.42 1.4E-05 28.5 4.5 56 3-65 66-121 (228)
95 2p9b_A Possible prolidase; pro 90.6 0.39 1.3E-05 30.4 4.2 18 22-39 120-137 (458)
96 3tha_A Tryptophan synthase alp 90.4 0.31 1.1E-05 29.8 3.5 36 19-54 105-140 (252)
97 4dyk_A Amidohydrolase; adenosi 90.3 0.13 4.4E-06 32.4 1.8 10 2-11 67-76 (451)
98 2imr_A Hypothetical protein DR 90.1 0.44 1.5E-05 29.9 4.1 21 22-42 137-157 (420)
99 3be7_A Zn-dependent arginine c 89.8 0.79 2.7E-05 28.4 5.1 38 2-39 59-109 (408)
100 2q09_A Imidazolonepropionase; 88.2 1.8 6.2E-05 26.9 5.9 11 2-12 67-77 (416)
101 4aql_A Guanine deaminase; hydr 88.1 0.84 2.9E-05 29.4 4.5 31 24-54 151-182 (476)
102 3nav_A Tryptophan synthase alp 87.7 0.88 3E-05 27.9 4.2 36 19-54 114-149 (271)
103 3mtw_A L-arginine carboxypepti 87.3 0.2 6.9E-06 29.5 1.1 11 2-12 59-69 (403)
104 1ra0_A Cytosine deaminase; alp 87.3 1.5 5.1E-05 27.4 5.2 11 2-12 60-70 (430)
105 1yrr_A N-acetylglucosamine-6-p 86.8 0.69 2.4E-05 28.6 3.4 36 3-38 55-99 (382)
106 1onw_A Isoaspartyl dipeptidase 86.7 0.51 1.7E-05 29.2 2.7 36 2-37 63-103 (390)
107 4gy7_A Urease; JACK bean, hydr 86.4 0.46 1.6E-05 33.4 2.6 31 3-40 403-433 (840)
108 3mdu_A N-formimino-L-glutamate 86.2 1.7 5.8E-05 27.6 5.1 10 2-11 51-60 (453)
109 3vnd_A TSA, tryptophan synthas 85.3 1.4 4.9E-05 26.9 4.2 36 19-54 112-147 (267)
110 3pnz_A Phosphotriesterase fami 85.2 2.9 9.8E-05 26.2 5.6 64 2-65 17-97 (330)
111 1geq_A Tryptophan synthase alp 85.1 3.7 0.00013 24.0 5.8 36 20-55 98-133 (248)
112 3mkv_A Putative amidohydrolase 83.4 0.49 1.7E-05 27.9 1.5 11 2-12 60-70 (426)
113 3pnu_A Dihydroorotase; TIM bar 83.3 2.6 8.9E-05 26.7 4.9 31 3-37 30-60 (359)
114 3s99_A Basic membrane lipoprot 83.2 2.5 8.4E-05 26.7 4.7 40 18-59 74-113 (356)
115 2obb_A Hypothetical protein; s 82.7 4.4 0.00015 22.4 5.4 39 17-55 27-65 (142)
116 2i5i_A UPF0249 protein EF_3048 82.0 3.3 0.00011 25.1 4.8 46 17-64 18-64 (263)
117 3fst_A 5,10-methylenetetrahydr 81.5 5 0.00017 25.0 5.6 49 17-65 97-153 (304)
118 4dbe_A Orotidine 5'-phosphate 80.6 3.7 0.00013 24.3 4.6 34 19-52 124-157 (222)
119 2ekc_A AQ_1548, tryptophan syn 80.6 4.1 0.00014 24.5 4.9 37 19-55 111-147 (262)
120 3ve9_A Orotidine-5'-phosphate 80.3 3.1 0.00011 24.6 4.2 33 19-51 117-149 (215)
121 3v7p_A Amidohydrolase family p 80.0 3.1 0.0001 26.3 4.4 11 2-12 56-66 (427)
122 4dzi_A Putative TIM-barrel met 79.6 3 0.0001 26.9 4.2 49 17-65 101-171 (423)
123 3m47_A Orotidine 5'-phosphate 79.5 2.7 9.3E-05 24.9 3.8 32 20-51 140-171 (228)
124 3hpa_A Amidohydrolase; signatu 79.3 0.56 1.9E-05 29.1 0.8 10 2-11 88-97 (479)
125 3iar_A Adenosine deaminase; pu 79.2 2.4 8.2E-05 27.0 3.6 28 2-32 7-34 (367)
126 2fqx_A Membrane lipoprotein TM 79.1 6.1 0.00021 23.9 5.4 37 18-56 50-86 (318)
127 4f0l_A Amidohydrolase; ssgcid, 78.7 1.4 4.9E-05 27.8 2.5 10 2-11 60-69 (458)
128 3apt_A Methylenetetrahydrofola 78.3 5.9 0.0002 24.6 5.2 49 17-65 86-150 (310)
129 3qw3_A Orotidine-5-phosphate d 78.1 2.5 8.5E-05 25.7 3.3 33 20-52 156-192 (255)
130 2bb0_A Imidazolonepropionase; 78.0 0.82 2.8E-05 28.5 1.2 11 2-12 75-85 (421)
131 1w3i_A EDA, 2-keto-3-deoxy glu 77.9 9.3 0.00032 23.3 5.9 44 19-62 22-73 (293)
132 3zzm_A Bifunctional purine bio 77.5 3.8 0.00013 27.6 4.3 37 19-56 475-511 (523)
133 3jr2_A Hexulose-6-phosphate sy 76.5 7.9 0.00027 22.4 5.1 45 3-54 63-108 (218)
134 2puz_A Imidazolonepropionase; 76.2 0.92 3.2E-05 28.2 1.1 11 2-12 79-89 (419)
135 1vhc_A Putative KHG/KDPG aldol 76.1 9.8 0.00033 22.5 6.2 46 17-62 29-74 (224)
136 2nuw_A 2-keto-3-deoxygluconate 76.0 9.5 0.00032 23.2 5.6 44 19-62 22-73 (288)
137 2r91_A 2-keto-3-deoxy-(6-phosp 75.8 8.1 0.00028 23.5 5.2 44 19-62 21-72 (286)
138 3qfm_A SAPH, putative uncharac 75.5 1.5 5.3E-05 26.3 1.9 47 18-64 26-75 (270)
139 2egz_A 3-dehydroquinate dehydr 73.8 8.7 0.0003 22.6 4.9 38 17-54 125-163 (219)
140 2qt3_A N-isopropylammelide iso 73.7 0.8 2.7E-05 28.2 0.3 11 2-12 55-65 (403)
141 3ctl_A D-allulose-6-phosphate 72.6 7.8 0.00027 23.0 4.5 47 18-65 68-115 (231)
142 2ocz_A 3-dehydroquinate dehydr 72.3 8.1 0.00028 22.9 4.5 36 17-52 128-165 (231)
143 4ep8_C Urease subunit alpha; a 72.1 1.1 3.9E-05 29.4 0.8 11 3-13 129-139 (566)
144 3f4w_A Putative hexulose 6 pho 72.1 11 0.00038 21.3 5.8 37 19-55 66-103 (211)
145 2q01_A Uronate isomerase; stru 70.3 6.2 0.00021 26.4 4.0 48 17-64 340-388 (497)
146 3o0f_A Putative metal-dependen 70.2 12 0.00042 23.2 5.1 43 19-62 215-259 (301)
147 3p6l_A Sugar phosphate isomera 70.2 13 0.00045 21.5 5.5 37 17-54 91-127 (262)
148 2lnd_A De novo designed protei 70.2 8.4 0.00029 19.9 3.7 36 18-53 65-101 (112)
149 4e38_A Keto-hydroxyglutarate-a 69.9 15 0.00052 22.0 6.2 45 18-62 47-91 (232)
150 4gxw_A Adenosine deaminase; am 69.8 3.1 0.00011 26.6 2.4 27 3-32 31-57 (380)
151 2ogj_A Dihydroorotase; TIM bar 69.8 1.6 5.4E-05 27.3 1.0 34 2-38 72-107 (417)
152 2pgf_A Adenosine deaminase; me 69.6 2.9 0.0001 26.4 2.2 28 1-31 44-71 (371)
153 2bdq_A Copper homeostasis prot 69.3 16 0.00054 22.0 5.3 49 17-65 133-189 (224)
154 3n3m_A Orotidine 5'-phosphate 68.6 6.8 0.00023 24.9 3.8 35 28-62 252-286 (342)
155 2hig_A 6-phospho-1-fructokinas 68.4 20 0.00067 24.0 6.0 47 16-63 175-224 (487)
156 3obe_A Sugar phosphate isomera 68.4 17 0.00057 21.9 5.6 22 18-39 115-136 (305)
157 1mxs_A KDPG aldolase; 2-keto-3 68.3 16 0.00054 21.6 6.2 47 17-63 38-84 (225)
158 1qop_A Tryptophan synthase alp 68.3 9.1 0.00031 23.0 4.2 35 20-54 112-146 (268)
159 1vp8_A Hypothetical protein AF 68.1 16 0.00056 21.6 5.5 33 19-51 32-64 (201)
160 1j5s_A Uronate isomerase; TM00 68.0 10 0.00035 25.1 4.6 44 19-64 336-379 (463)
161 1wbh_A KHG/KDPG aldolase; lyas 68.0 16 0.00053 21.4 6.1 46 17-62 28-73 (214)
162 1ujp_A Tryptophan synthase alp 67.3 5.5 0.00019 24.3 3.1 36 19-54 108-143 (271)
163 4ehi_A Bifunctional purine bio 66.7 7.6 0.00026 26.3 3.8 37 19-56 486-522 (534)
164 3gip_A N-acyl-D-glutamate deac 66.3 2.2 7.4E-05 27.5 1.2 11 2-12 61-71 (480)
165 3vi3_B Integrin beta-1; beta p 66.3 20 0.00069 23.7 5.7 50 5-56 278-334 (454)
166 3rys_A Adenosine deaminase 1; 65.8 4.7 0.00016 25.4 2.6 28 2-32 14-41 (343)
167 1zcz_A Bifunctional purine bio 65.8 10 0.00035 25.2 4.2 37 19-56 416-452 (464)
168 2nu8_A Succinyl-COA ligase [AD 65.6 14 0.00048 22.5 4.7 38 18-55 76-115 (288)
169 3kwp_A Predicted methyltransfe 65.5 16 0.00053 22.5 4.9 45 19-65 106-150 (296)
170 3d03_A Phosphohydrolase; glyce 65.3 17 0.00058 20.9 6.3 62 3-64 6-81 (274)
171 1v77_A PH1877P, hypothetical p 65.1 11 0.00037 21.9 4.0 60 4-63 97-169 (212)
172 3b4u_A Dihydrodipicolinate syn 64.4 21 0.00073 21.7 6.3 36 19-54 26-68 (294)
173 2yv2_A Succinyl-COA synthetase 64.1 15 0.00053 22.4 4.7 38 18-55 83-122 (297)
174 2hqb_A Transcriptional activat 63.6 5.8 0.0002 23.7 2.7 36 19-56 52-87 (296)
175 1rk6_A D-aminoacylase; TIM bar 63.1 2.9 9.8E-05 26.9 1.3 11 2-12 75-85 (496)
176 3pao_A Adenosine deaminase; st 63.0 5.6 0.00019 24.8 2.6 27 3-32 12-38 (326)
177 1tqj_A Ribulose-phosphate 3-ep 62.9 19 0.00066 21.1 4.8 35 19-53 74-110 (230)
178 3lab_A Putative KDPG (2-keto-3 62.8 22 0.00074 21.2 6.1 46 17-62 25-70 (217)
179 2o7s_A DHQ-SDH PR, bifunctiona 62.7 24 0.00083 23.2 5.7 37 18-54 135-173 (523)
180 3l21_A DHDPS, dihydrodipicolin 62.7 24 0.00082 21.7 5.6 35 19-53 38-79 (304)
181 1xky_A Dihydrodipicolinate syn 62.3 21 0.00071 21.9 5.0 34 19-52 35-75 (301)
182 2a22_A Vacuolar protein sortin 62.0 19 0.00064 20.6 4.6 56 4-64 32-88 (215)
183 2yv1_A Succinyl-COA ligase [AD 61.9 18 0.00061 22.1 4.7 37 19-55 83-121 (294)
184 1dih_A Dihydrodipicolinate red 61.8 12 0.00041 22.7 3.8 40 19-58 85-125 (273)
185 3a5f_A Dihydrodipicolinate syn 61.7 22 0.00075 21.6 5.0 34 19-52 24-64 (291)
186 1uf3_A Hypothetical protein TT 61.6 14 0.00048 20.6 3.9 46 19-64 21-73 (228)
187 3ovg_A Amidohydrolase; structu 61.4 15 0.00051 23.3 4.3 65 1-65 20-103 (363)
188 3dz1_A Dihydrodipicolinate syn 61.2 26 0.00089 21.6 5.6 34 19-52 31-71 (313)
189 3o1n_A 3-dehydroquinate dehydr 61.0 15 0.0005 22.5 4.1 36 17-52 176-213 (276)
190 2wkj_A N-acetylneuraminate lya 60.8 26 0.00089 21.5 5.6 35 19-53 34-75 (303)
191 2yr1_A 3-dehydroquinate dehydr 60.7 11 0.00037 22.8 3.5 36 17-52 156-193 (257)
192 1o5k_A DHDPS, dihydrodipicolin 60.7 23 0.00079 21.7 5.0 34 19-52 35-75 (306)
193 2wm8_A MDP-1, magnesium-depend 60.5 19 0.00064 19.7 5.0 34 15-48 69-103 (187)
194 2fli_A Ribulose-phosphate 3-ep 60.0 19 0.00065 20.4 4.4 46 19-65 73-118 (220)
195 3flu_A DHDPS, dihydrodipicolin 59.9 24 0.00083 21.5 5.0 34 19-52 30-70 (297)
196 4do7_A Amidohydrolase 2; enzym 59.7 26 0.00088 21.0 5.7 37 19-57 124-160 (303)
197 3qw4_B UMP synthase; N-termina 59.6 8 0.00027 25.3 2.9 33 20-52 157-193 (453)
198 3m6y_A 4-hydroxy-2-oxoglutarat 59.6 14 0.00047 22.9 3.8 17 18-34 223-239 (275)
199 3s5o_A 4-hydroxy-2-oxoglutarat 59.5 28 0.00095 21.4 6.1 36 19-54 37-79 (307)
200 3rc1_A Sugar 3-ketoreductase; 59.4 28 0.00096 21.4 5.5 42 19-62 102-146 (350)
201 1t57_A Conserved protein MTH16 59.3 13 0.00045 22.1 3.6 33 19-51 40-72 (206)
202 2rfg_A Dihydrodipicolinate syn 59.0 22 0.00076 21.7 4.7 34 19-52 23-63 (297)
203 3fkr_A L-2-keto-3-deoxyarabona 59.0 22 0.00074 21.9 4.7 35 19-53 31-72 (309)
204 3qze_A DHDPS, dihydrodipicolin 58.9 22 0.00076 21.9 4.8 34 19-52 46-86 (314)
205 1g8m_A Aicar transformylase-IM 58.6 11 0.00036 25.9 3.4 37 19-56 545-581 (593)
206 2yvt_A Hypothetical protein AQ 58.5 24 0.0008 20.2 5.5 30 3-38 11-40 (260)
207 2ojp_A DHDPS, dihydrodipicolin 58.4 23 0.0008 21.5 4.7 34 19-52 24-64 (292)
208 2r8w_A AGR_C_1641P; APC7498, d 58.3 31 0.0011 21.5 5.6 35 19-53 57-98 (332)
209 3na8_A Putative dihydrodipicol 58.2 23 0.00079 21.9 4.7 35 19-53 47-88 (315)
210 1nnl_A L-3-phosphoserine phosp 58.2 22 0.00074 19.7 4.4 34 15-48 87-120 (225)
211 3pdw_A Uncharacterized hydrola 58.1 22 0.00077 20.4 4.5 34 19-52 27-60 (266)
212 3m5v_A DHDPS, dihydrodipicolin 58.0 29 0.001 21.2 5.4 34 19-52 30-70 (301)
213 3qfe_A Putative dihydrodipicol 57.9 26 0.00088 21.7 4.9 35 19-53 34-75 (318)
214 2f48_A Diphosphate--fructose-6 57.7 36 0.0012 23.0 5.9 45 18-63 154-201 (555)
215 2fp4_A Succinyl-COA ligase [GD 57.6 27 0.00094 21.5 5.0 36 19-54 84-121 (305)
216 4gj1_A 1-(5-phosphoribosyl)-5- 57.6 22 0.00077 21.0 4.5 35 21-55 88-122 (243)
217 3daq_A DHDPS, dihydrodipicolin 57.2 29 0.00099 21.1 5.0 34 19-52 25-65 (292)
218 1sfl_A 3-dehydroquinate dehydr 57.1 9.9 0.00034 22.6 2.9 37 17-53 142-180 (238)
219 4a3s_A 6-phosphofructokinase; 57.0 20 0.00068 22.4 4.3 42 18-63 81-122 (319)
220 3e96_A Dihydrodipicolinate syn 56.8 25 0.00084 21.7 4.7 35 19-53 35-76 (316)
221 3t3p_B Integrin beta-3; integr 56.7 41 0.0014 22.4 7.1 50 5-56 270-327 (472)
222 1yns_A E-1 enzyme; hydrolase f 56.6 21 0.00071 20.9 4.2 35 14-48 130-164 (261)
223 3si9_A DHDPS, dihydrodipicolin 56.5 26 0.00088 21.7 4.7 34 19-52 45-85 (315)
224 4fb5_A Probable oxidoreductase 56.3 31 0.0011 21.0 5.1 15 40-54 130-144 (393)
225 3ec7_A Putative dehydrogenase; 56.3 27 0.00093 21.5 4.9 35 20-55 101-138 (357)
226 3tak_A DHDPS, dihydrodipicolin 56.3 20 0.00068 21.8 4.2 34 19-52 24-64 (291)
227 3h5d_A DHDPS, dihydrodipicolin 56.2 25 0.00087 21.6 4.7 36 18-53 29-71 (311)
228 3m0z_A Putative aldolase; MCSG 56.0 15 0.00052 22.4 3.5 33 19-53 176-210 (249)
229 2v9d_A YAGE; dihydrodipicolini 55.8 25 0.00087 22.0 4.7 34 19-52 54-94 (343)
230 3d0c_A Dihydrodipicolinate syn 55.8 28 0.00095 21.5 4.8 34 19-52 35-75 (314)
231 3iac_A Glucuronate isomerase; 55.3 37 0.0013 22.6 5.5 47 17-63 333-386 (473)
232 3mwd_B ATP-citrate synthase; A 55.2 22 0.00077 22.4 4.3 36 20-55 94-131 (334)
233 3v5n_A Oxidoreductase; structu 55.1 35 0.0012 21.6 5.3 34 20-54 124-160 (417)
234 1twd_A Copper homeostasis prot 55.0 34 0.0012 20.9 5.4 49 17-65 128-181 (256)
235 2vc6_A MOSA, dihydrodipicolina 54.5 25 0.00085 21.4 4.4 34 19-52 23-63 (292)
236 3fhl_A Putative oxidoreductase 54.4 30 0.001 21.3 4.8 34 20-54 79-115 (362)
237 2z1d_A Hydrogenase expression/ 54.4 12 0.00042 24.2 3.1 18 46-63 129-149 (372)
238 3dty_A Oxidoreductase, GFO/IDH 54.3 37 0.0013 21.2 5.3 17 38-54 119-135 (398)
239 4ggi_A UDP-2,3-diacylglucosami 54.2 34 0.0012 20.8 5.1 44 20-65 234-279 (283)
240 4h3d_A 3-dehydroquinate dehydr 53.5 20 0.00069 21.6 3.8 35 18-52 157-193 (258)
241 3v4v_B Integrin beta-7; cell a 53.4 36 0.0012 22.9 5.3 35 5-39 289-331 (503)
242 2hmc_A AGR_L_411P, dihydrodipi 53.3 32 0.0011 21.6 4.8 32 19-50 49-87 (344)
243 3ijd_A Uncharacterized protein 52.9 11 0.00039 23.6 2.7 48 17-65 104-158 (315)
244 3cu2_A Ribulose-5-phosphate 3- 52.9 34 0.0012 20.4 5.8 38 17-54 79-116 (237)
245 1nnw_A Hypothetical protein; s 52.6 16 0.00055 21.0 3.2 54 3-64 7-73 (252)
246 1oi7_A Succinyl-COA synthetase 52.4 24 0.00081 21.5 4.1 37 19-55 77-115 (288)
247 3qgm_A P-nitrophenyl phosphata 51.8 29 0.00099 19.9 4.3 30 18-47 28-57 (268)
248 4dpp_A DHDPS 2, dihydrodipicol 51.6 44 0.0015 21.3 5.6 34 19-52 82-122 (360)
249 4f3y_A DHPR, dihydrodipicolina 51.5 15 0.00051 22.3 3.1 37 19-55 86-123 (272)
250 3e9m_A Oxidoreductase, GFO/IDH 51.2 39 0.0013 20.5 4.9 34 20-54 81-117 (330)
251 3rqz_A Metallophosphoesterase; 51.0 7.8 0.00027 22.6 1.7 54 3-64 9-65 (246)
252 2rbg_A Putative uncharacterize 50.9 29 0.00098 18.9 4.0 39 17-56 73-111 (126)
253 2q02_A Putative cytoplasmic pr 50.8 33 0.0011 19.7 6.1 18 19-36 87-104 (272)
254 3of4_A Nitroreductase; structu 50.8 14 0.00048 21.0 2.7 45 19-63 139-185 (209)
255 3gdo_A Uncharacterized oxidore 50.7 38 0.0013 20.8 4.8 35 19-54 78-115 (358)
256 1h1y_A D-ribulose-5-phosphate 50.6 30 0.001 20.0 4.2 19 20-38 77-95 (228)
257 3mz0_A Inositol 2-dehydrogenas 50.2 34 0.0012 20.8 4.6 35 20-55 80-117 (344)
258 1rpx_A Protein (ribulose-phosp 50.1 34 0.0012 19.6 6.5 38 17-54 78-117 (230)
259 2nxf_A Putative dimetal phosph 50.0 29 0.001 20.2 4.1 46 19-64 40-97 (322)
260 2zds_A Putative DNA-binding pr 49.9 39 0.0013 20.1 6.2 48 17-64 15-73 (340)
261 3o9z_A Lipopolysaccaride biosy 49.7 36 0.0012 20.6 4.6 33 21-54 87-122 (312)
262 3igs_A N-acetylmannosamine-6-p 49.1 39 0.0013 19.9 5.3 42 22-64 93-137 (232)
263 4gmf_A Yersiniabactin biosynth 49.1 39 0.0013 21.3 4.8 15 18-32 107-121 (372)
264 3ijp_A DHPR, dihydrodipicolina 49.0 22 0.00077 21.9 3.6 37 19-55 101-138 (288)
265 1zxx_A 6-phosphofructokinase; 48.9 28 0.00096 21.8 4.0 35 18-53 81-115 (319)
266 2kqv_A Non-structural protein 48.8 27 0.00092 20.5 3.6 40 17-60 9-48 (198)
267 3o8l_A 6-phosphofructokinase, 48.6 36 0.0012 24.0 4.8 46 17-63 476-525 (762)
268 3cea_A MYO-inositol 2-dehydrog 48.4 42 0.0014 20.3 4.8 41 20-61 85-128 (346)
269 3a1c_A Probable copper-exporti 48.3 40 0.0014 19.8 5.0 35 15-49 164-198 (287)
270 1xpj_A Hypothetical protein; s 48.0 29 0.00098 18.1 5.0 38 18-55 28-77 (126)
271 2w2g_A Non-structural protein 47.9 44 0.0015 20.3 4.6 39 18-60 144-182 (264)
272 3i23_A Oxidoreductase, GFO/IDH 47.9 46 0.0016 20.4 5.2 34 20-54 79-115 (349)
273 4had_A Probable oxidoreductase 47.5 34 0.0012 20.8 4.2 13 19-31 126-138 (350)
274 3eb2_A Putative dihydrodipicol 47.5 22 0.00075 21.8 3.4 35 19-53 27-68 (300)
275 3m9w_A D-xylose-binding peripl 47.2 41 0.0014 19.7 5.0 33 20-52 48-80 (313)
276 3q58_A N-acetylmannosamine-6-p 47.1 42 0.0014 19.7 5.3 42 22-64 93-137 (229)
277 2duw_A Putative COA-binding pr 47.1 27 0.00091 18.9 3.4 37 17-55 81-117 (145)
278 1f6k_A N-acetylneuraminate lya 46.7 47 0.0016 20.1 6.4 34 19-52 26-67 (293)
279 3hno_A Pyrophosphate-dependent 46.5 58 0.002 21.2 5.8 34 18-52 92-125 (419)
280 1pfk_A Phosphofructokinase; tr 46.4 52 0.0018 20.6 5.1 35 18-53 82-116 (320)
281 3e18_A Oxidoreductase; dehydro 46.4 47 0.0016 20.4 4.8 34 20-54 79-115 (359)
282 3cpr_A Dihydrodipicolinate syn 46.3 49 0.0017 20.2 6.3 34 19-52 39-79 (304)
283 3gbv_A Putative LACI-family tr 46.1 41 0.0014 19.4 4.8 30 20-49 59-88 (304)
284 4hkt_A Inositol 2-dehydrogenas 46.1 47 0.0016 20.0 5.2 35 20-55 77-114 (331)
285 2yxg_A DHDPS, dihydrodipicolin 46.0 48 0.0016 20.1 6.3 34 19-52 23-63 (289)
286 3rjz_A N-type ATP pyrophosphat 45.9 46 0.0016 19.9 4.6 21 16-36 125-145 (237)
287 3lyh_A Cobalamin (vitamin B12) 45.8 28 0.00094 18.2 3.3 21 17-37 48-68 (126)
288 3ib6_A Uncharacterized protein 45.8 36 0.0012 18.6 5.1 26 15-40 35-60 (189)
289 2fea_A 2-hydroxy-3-keto-5-meth 45.7 32 0.0011 19.4 3.8 35 15-49 78-112 (236)
290 2ehh_A DHDPS, dihydrodipicolin 45.7 49 0.0017 20.1 6.2 34 19-52 23-63 (294)
291 3rot_A ABC sugar transporter, 45.5 42 0.0014 19.5 4.3 32 20-51 51-82 (297)
292 3kdf_A Replication protein A 1 45.5 10 0.00034 20.5 1.4 21 39-59 94-114 (121)
293 3tqv_A Nicotinate-nucleotide p 45.5 52 0.0018 20.4 5.3 48 17-65 206-253 (287)
294 1lbq_A Ferrochelatase; rossman 45.3 32 0.0011 21.8 3.9 23 17-39 109-131 (362)
295 3evn_A Oxidoreductase, GFO/IDH 45.3 49 0.0017 20.0 5.5 42 19-62 80-124 (329)
296 3u3x_A Oxidoreductase; structu 45.2 52 0.0018 20.3 5.3 16 38-53 122-137 (361)
297 2pr7_A Haloacid dehalogenase/e 44.9 29 0.001 17.3 3.4 30 17-46 21-50 (137)
298 2x7v_A Probable endonuclease 4 44.9 44 0.0015 19.3 4.6 39 17-55 12-60 (287)
299 2nvw_A Galactose/lactose metab 44.9 62 0.0021 21.0 5.6 25 38-62 148-172 (479)
300 3g1w_A Sugar ABC transporter; 44.8 44 0.0015 19.4 5.0 33 20-52 51-83 (305)
301 1tv8_A MOAA, molybdenum cofact 44.6 38 0.0013 20.5 4.2 38 18-55 54-94 (340)
302 2r7h_A Putative D-alanine N-ac 44.6 33 0.0011 17.7 4.9 38 19-56 116-153 (177)
303 3kux_A Putative oxidoreductase 44.4 52 0.0018 20.1 5.4 34 20-54 81-117 (352)
304 3fcs_B Integrin beta-3; beta p 44.2 78 0.0027 22.0 6.9 35 5-39 270-312 (690)
305 3qdl_A Oxygen-insensitive NADP 43.9 31 0.0011 19.5 3.5 44 20-63 145-190 (210)
306 2lci_A Protein OR36; structura 43.8 36 0.0012 18.0 5.1 42 18-59 34-80 (134)
307 3l6u_A ABC-type sugar transpor 43.8 45 0.0015 19.1 5.4 33 20-52 54-86 (293)
308 3ztv_A NAD nucleotidase, NADN; 43.6 63 0.0021 21.6 5.3 46 19-66 183-228 (579)
309 4g1k_A Triosephosphate isomera 43.5 25 0.00084 21.7 3.1 27 18-44 129-159 (272)
310 3ar4_A Sarcoplasmic/endoplasmi 43.5 54 0.0019 23.4 5.2 33 14-46 603-635 (995)
311 1b9b_A TIM, protein (triosepho 43.3 35 0.0012 20.8 3.7 21 23-43 114-134 (255)
312 2zxe_A Na, K-ATPase alpha subu 43.2 50 0.0017 23.7 5.0 31 15-45 600-630 (1028)
313 1z2w_A Vacuolar protein sortin 43.2 20 0.00069 19.9 2.6 57 3-64 16-73 (192)
314 3db2_A Putative NADPH-dependen 43.2 55 0.0019 20.0 4.8 35 19-54 79-116 (354)
315 1wyz_A Putative S-adenosylmeth 43.1 49 0.0017 19.4 5.0 16 23-38 105-120 (242)
316 3oox_A Putative 2OG-Fe(II) oxy 43.0 25 0.00085 21.5 3.1 35 19-53 23-57 (312)
317 2kkn_A Uncharacterized protein 42.9 36 0.0012 18.9 3.6 45 18-64 39-83 (178)
318 2fds_A Orotidine-monophosphate 42.9 35 0.0012 21.7 3.8 39 24-62 244-288 (352)
319 3gbh_A NAD(P)H-flavin oxidored 42.8 17 0.00059 20.5 2.3 44 20-63 148-193 (213)
320 3ic5_A Putative saccharopine d 42.5 31 0.0011 16.9 4.0 33 20-53 83-115 (118)
321 3skx_A Copper-exporting P-type 42.4 46 0.0016 18.9 4.4 34 15-48 145-178 (280)
322 3gve_A YFKN protein; alpha-bet 42.3 34 0.0012 21.3 3.7 48 19-66 196-251 (341)
323 3ngf_A AP endonuclease, family 42.3 49 0.0017 19.1 5.9 39 17-55 23-61 (269)
324 1l6r_A Hypothetical protein TA 42.0 44 0.0015 19.1 4.0 32 17-48 25-56 (227)
325 2v82_A 2-dehydro-3-deoxy-6-pho 41.9 46 0.0016 18.7 4.8 38 18-55 20-57 (212)
326 3l9c_A 3-dehydroquinate dehydr 41.8 57 0.0019 19.7 5.5 36 18-53 160-197 (259)
327 3gfa_A Putative nitroreductase 41.6 18 0.00062 20.0 2.2 44 19-63 133-178 (198)
328 3oa3_A Aldolase; structural ge 41.4 49 0.0017 20.6 4.2 50 10-62 67-117 (288)
329 3fvv_A Uncharacterized protein 41.4 40 0.0014 18.6 3.7 26 16-41 94-119 (232)
330 2qee_A BH0493 protein; amidohy 41.3 48 0.0016 21.9 4.3 42 19-63 286-327 (437)
331 3kxq_A Triosephosphate isomera 41.2 28 0.00095 21.5 3.1 22 24-45 139-160 (275)
332 3j08_A COPA, copper-exporting 41.1 62 0.0021 22.0 5.0 30 14-43 457-486 (645)
333 3th6_A Triosephosphate isomera 41.1 30 0.001 21.0 3.2 21 23-43 113-133 (249)
334 2p9j_A Hypothetical protein AQ 41.1 40 0.0014 17.7 3.9 28 19-46 41-68 (162)
335 4h3v_A Oxidoreductase domain p 41.1 59 0.002 19.7 4.9 13 38-50 109-121 (390)
336 3rru_A TOM1L1 protein; structu 41.0 22 0.00076 19.8 2.5 36 9-52 7-42 (152)
337 3e58_A Putative beta-phosphogl 41.0 41 0.0014 17.9 4.9 34 15-48 90-123 (214)
338 2d59_A Hypothetical protein PH 40.9 42 0.0015 18.0 3.8 35 19-55 90-124 (144)
339 1icr_A Oxygen-insensitive NAD( 40.8 33 0.0011 19.1 3.3 44 20-63 148-193 (217)
340 3kzx_A HAD-superfamily hydrola 40.8 45 0.0015 18.3 4.2 34 15-48 104-137 (231)
341 3qc0_A Sugar isomerase; TIM ba 40.7 44 0.0015 19.1 3.9 37 18-54 19-57 (275)
342 2qpx_A Predicted metal-depende 40.7 9.3 0.00032 24.1 0.9 8 2-9 13-20 (376)
343 3l49_A ABC sugar (ribose) tran 40.5 51 0.0018 18.9 6.0 34 20-53 51-84 (291)
344 8abp_A L-arabinose-binding pro 40.5 53 0.0018 19.0 6.4 34 20-53 47-80 (306)
345 3epr_A Hydrolase, haloacid deh 40.4 51 0.0017 18.9 4.1 34 17-50 24-57 (264)
346 1rd5_A Tryptophan synthase alp 40.3 55 0.0019 19.2 4.3 22 17-38 130-151 (262)
347 3on7_A Oxidoreductase, iron/as 40.3 30 0.001 20.9 3.1 36 18-53 14-49 (280)
348 3m2t_A Probable dehydrogenase; 40.2 55 0.0019 20.1 4.4 32 22-54 84-118 (359)
349 3m1y_A Phosphoserine phosphata 40.2 44 0.0015 18.1 3.7 34 15-48 76-109 (217)
350 3uuw_A Putative oxidoreductase 40.1 51 0.0018 19.6 4.2 42 19-62 79-123 (308)
351 3bio_A Oxidoreductase, GFO/IDH 39.9 36 0.0012 20.6 3.5 46 20-65 79-128 (304)
352 3noj_A 4-carboxy-4-hydroxy-2-o 39.9 60 0.002 19.4 4.5 41 20-65 102-142 (238)
353 3h4o_A Nitroreductase family p 39.9 18 0.00062 20.4 2.0 45 19-63 119-164 (191)
354 3sxu_A DNA polymerase III subu 39.9 48 0.0016 18.3 4.2 28 22-50 31-58 (150)
355 1ccw_A Protein (glutamate muta 39.8 44 0.0015 17.9 3.9 13 19-31 71-83 (137)
356 3o8o_A 6-phosphofructokinase s 39.8 1E+02 0.0034 22.0 6.2 35 18-53 471-505 (787)
357 3ngj_A Deoxyribose-phosphate a 39.8 41 0.0014 20.3 3.6 44 16-62 42-86 (239)
358 4gqa_A NAD binding oxidoreduct 39.7 66 0.0022 20.1 4.8 16 38-53 130-145 (412)
359 2x5n_A SPRPN10, 26S proteasome 39.7 27 0.00093 19.8 2.8 35 18-53 123-158 (192)
360 2v5b_A Triosephosphate isomera 39.5 32 0.0011 20.8 3.1 21 23-43 107-127 (244)
361 3ksm_A ABC-type sugar transpor 39.4 52 0.0018 18.6 4.9 32 21-52 49-81 (276)
362 1yy3_A S-adenosylmethionine:tR 39.4 22 0.00076 22.8 2.5 24 17-41 237-260 (346)
363 4ex6_A ALNB; modified rossman 39.3 48 0.0016 18.2 4.3 35 15-49 105-139 (237)
364 2yw3_A 4-hydroxy-2-oxoglutarat 39.3 55 0.0019 18.8 5.7 44 17-62 25-68 (207)
365 1k77_A EC1530, hypothetical pr 39.3 53 0.0018 18.7 4.5 39 17-55 15-53 (260)
366 1yx1_A Hypothetical protein PA 39.2 55 0.0019 18.8 5.8 38 17-54 84-124 (264)
367 2czd_A Orotidine 5'-phosphate 38.8 53 0.0018 18.6 3.9 35 17-51 119-153 (208)
368 1iuk_A Hypothetical protein TT 38.8 24 0.00082 19.0 2.4 35 19-55 83-117 (140)
369 3ff4_A Uncharacterized protein 38.8 36 0.0012 18.1 3.0 35 19-55 71-105 (122)
370 1w9y_A 1-aminocyclopropane-1-c 38.7 36 0.0012 21.0 3.4 35 19-53 21-55 (319)
371 2dst_A Hypothetical protein TT 38.7 40 0.0014 17.0 3.5 39 24-63 72-110 (131)
372 1nox_A NADH oxidase; flavoenzy 38.6 33 0.0011 19.0 3.0 44 20-63 141-185 (205)
373 3nvb_A Uncharacterized protein 38.6 74 0.0025 20.5 4.9 31 18-48 260-290 (387)
374 3moi_A Probable dehydrogenase; 38.5 67 0.0023 19.9 4.6 17 38-54 98-114 (387)
375 3jtw_A Dihydrofolate reductase 38.5 39 0.0013 18.8 3.3 31 17-48 96-126 (178)
376 3opy_B 6-phosphofructo-1-kinas 38.3 1.1E+02 0.0039 22.2 6.1 46 17-63 649-698 (941)
377 1eix_A Orotidine 5'-monophosph 38.2 30 0.001 20.4 2.9 48 3-54 69-117 (245)
378 1k1e_A Deoxy-D-mannose-octulos 38.2 49 0.0017 17.9 3.8 29 19-47 40-68 (180)
379 1p9l_A Dihydrodipicolinate red 37.9 58 0.002 19.4 4.1 37 18-54 57-94 (245)
380 2i5g_A Amidohydrolase; NYSGXRC 37.7 49 0.0017 20.7 3.9 37 19-58 141-178 (325)
381 3q2i_A Dehydrogenase; rossmann 37.5 68 0.0023 19.5 4.5 17 38-54 109-125 (354)
382 2pib_A Phosphorylated carbohyd 37.4 48 0.0016 17.6 4.9 33 15-47 85-117 (216)
383 3qst_A Triosephosphate isomera 37.4 45 0.0015 20.3 3.6 22 23-44 115-136 (255)
384 3r12_A Deoxyribose-phosphate a 37.3 55 0.0019 20.0 4.0 35 16-53 58-92 (260)
385 3j09_A COPA, copper-exporting 37.3 77 0.0026 21.8 5.1 29 14-42 535-563 (723)
386 2xsa_A Ogoga, hyaluronoglucosa 37.3 40 0.0014 22.3 3.5 48 18-65 18-80 (447)
387 2pi2_E Replication protein A 1 37.3 16 0.00056 20.3 1.5 21 39-59 115-135 (142)
388 3krs_A Triosephosphate isomera 37.0 36 0.0012 20.9 3.1 22 23-44 136-157 (271)
389 1vdr_A DHFR, dihydrofolate red 37.0 24 0.00083 19.3 2.2 34 17-51 80-113 (162)
390 2b67_A COG0778: nitroreductase 37.0 29 0.00098 19.3 2.6 44 20-63 140-184 (204)
391 2gmw_A D,D-heptose 1,7-bisphos 36.9 56 0.0019 18.2 5.0 26 15-40 51-76 (211)
392 3pnx_A Putative sulfurtransfer 36.9 38 0.0013 19.0 3.0 18 17-34 102-119 (160)
393 3bem_A Putative NAD(P)H nitror 36.9 28 0.00096 19.7 2.6 44 20-63 152-196 (218)
394 1q6o_A Humps, 3-keto-L-gulonat 36.9 59 0.002 18.5 6.0 45 3-54 60-105 (216)
395 3lub_A Putative creatinine ami 36.8 68 0.0023 19.2 5.3 38 19-56 99-138 (254)
396 3k9c_A Transcriptional regulat 36.7 44 0.0015 19.4 3.4 25 19-43 55-79 (289)
397 2zvr_A Uncharacterized protein 36.6 64 0.0022 18.8 4.8 38 18-55 42-81 (290)
398 3ohs_X Trans-1,2-dihydrobenzen 36.6 70 0.0024 19.3 5.4 41 20-62 80-123 (334)
399 1y81_A Conserved hypothetical 36.5 51 0.0017 17.6 3.8 35 18-54 81-115 (138)
400 3uug_A Multiple sugar-binding 36.5 65 0.0022 18.9 5.5 34 20-53 49-82 (330)
401 1ijb_A VON willebrand factor; 36.5 56 0.0019 18.1 3.9 35 18-53 134-169 (202)
402 2zxd_A Alpha-L-fucosidase, put 36.5 37 0.0013 22.3 3.3 21 18-38 106-126 (455)
403 1vm6_A DHPR, dihydrodipicolina 36.3 37 0.0013 20.4 3.0 37 18-54 65-102 (228)
404 1tre_A Triosephosphate isomera 36.3 38 0.0013 20.6 3.1 21 23-43 113-133 (255)
405 4h2g_A 5'-nucleotidase; dimer, 36.3 89 0.0031 20.6 5.1 45 19-65 197-241 (546)
406 1su1_A Hypothetical protein YF 36.2 60 0.002 18.4 3.9 47 18-64 40-98 (208)
407 2nyv_A Pgpase, PGP, phosphogly 36.2 56 0.0019 18.1 4.4 31 15-45 84-114 (222)
408 3m9l_A Hydrolase, haloacid deh 36.2 53 0.0018 17.7 4.7 33 16-48 72-104 (205)
409 3v48_A Aminohydrolase, putativ 36.2 60 0.002 18.4 6.6 40 19-59 69-109 (268)
410 3vup_A Beta-1,4-mannanase; TIM 36.1 63 0.0022 18.6 6.0 44 19-63 44-110 (351)
411 3euw_A MYO-inositol dehydrogen 36.0 58 0.002 19.7 4.0 35 19-54 78-115 (344)
412 2q8u_A Exonuclease, putative; 36.0 71 0.0024 19.3 4.4 21 19-39 50-70 (336)
413 1vk8_A Hypothetical protein TM 36.0 45 0.0016 17.5 3.1 35 19-53 35-71 (106)
414 3l8h_A Putative haloacid dehal 35.9 51 0.0018 17.5 4.5 26 15-40 28-53 (179)
415 3hcn_A Ferrochelatase, mitocho 35.8 53 0.0018 20.9 3.8 27 13-39 245-271 (359)
416 1o4u_A Type II quinolic acid p 35.8 77 0.0026 19.5 6.0 47 18-65 202-251 (285)
417 1gp6_A Leucoanthocyanidin diox 35.8 43 0.0015 21.0 3.4 34 20-53 68-101 (356)
418 2h1v_A Ferrochelatase; rossman 35.8 42 0.0014 20.6 3.3 26 14-39 230-256 (310)
419 1b0n_B Protein (SINI protein); 35.7 36 0.0012 16.0 2.4 28 18-53 14-41 (57)
420 1lxn_A Hypothetical protein MT 35.7 41 0.0014 17.3 2.9 36 17-52 20-58 (99)
421 2zv3_A PTH, peptidyl-tRNA hydr 35.7 51 0.0017 17.4 5.1 34 20-53 38-71 (115)
422 2c5q_A RRAA-like protein YER01 35.5 72 0.0025 19.1 4.6 41 20-65 101-141 (240)
423 3l0g_A Nicotinate-nucleotide p 35.5 82 0.0028 19.7 5.2 48 17-65 215-262 (300)
424 3u0h_A Xylose isomerase domain 35.4 64 0.0022 18.5 4.1 17 18-34 17-33 (281)
425 3ge6_A Nitroreductase; structu 35.2 20 0.00069 20.2 1.7 43 21-63 148-192 (212)
426 2ixa_A Alpha-N-acetylgalactosa 35.2 78 0.0027 20.1 4.6 35 19-54 104-141 (444)
427 1shu_X Anthrax toxin receptor 35.1 37 0.0013 18.2 2.8 11 22-32 126-136 (182)
428 1n3y_A Integrin alpha-X; alpha 35.1 55 0.0019 17.8 3.6 35 18-53 128-167 (198)
429 2dfa_A Hypothetical UPF0271 pr 35.1 45 0.0015 20.4 3.3 56 4-66 3-64 (250)
430 2btm_A TIM, protein (triosepho 35.0 35 0.0012 20.7 2.8 21 23-43 112-132 (252)
431 3neh_A Renal dipeptidase famil 35.0 37 0.0013 21.3 3.0 36 19-58 156-192 (318)
432 4fkc_A XAA-Pro aminopeptidase; 34.8 34 0.0012 21.2 2.8 35 11-47 11-45 (377)
433 3ib7_A ICC protein; metallopho 34.7 71 0.0024 18.8 5.6 47 18-64 52-110 (330)
434 4eze_A Haloacid dehalogenase-l 34.7 73 0.0025 19.4 4.3 34 15-48 180-213 (317)
435 2x5e_A UPF0271 protein PA4511; 34.6 46 0.0016 20.4 3.3 43 17-66 25-70 (252)
436 1aw2_A Triosephosphate isomera 34.6 36 0.0012 20.7 2.8 21 23-43 115-135 (256)
437 1v6t_A Hypothetical UPF0271 pr 34.6 46 0.0016 20.4 3.3 56 4-66 3-64 (255)
438 3dmy_A Protein FDRA; predicted 34.4 95 0.0032 20.6 5.0 36 19-55 49-86 (480)
439 3gnn_A Nicotinate-nucleotide p 34.4 84 0.0029 19.6 4.6 48 17-65 217-264 (298)
440 1xvi_A MPGP, YEDP, putative ma 34.4 70 0.0024 18.7 4.2 31 17-47 29-59 (275)
441 3tva_A Xylose isomerase domain 34.3 70 0.0024 18.6 4.3 40 17-56 21-65 (290)
442 3ixz_A Potassium-transporting 34.2 66 0.0023 23.1 4.5 29 15-43 605-633 (1034)
443 3gag_A Putative NADH dehydroge 34.1 14 0.00049 20.7 1.0 44 20-63 141-185 (206)
444 2hsz_A Novel predicted phospha 34.0 65 0.0022 18.1 4.4 28 15-42 115-142 (243)
445 4gqr_A Pancreatic alpha-amylas 34.0 22 0.00075 22.4 1.9 21 17-37 77-97 (496)
446 1xhk_A Putative protease LA ho 33.9 64 0.0022 18.3 3.8 26 18-43 136-161 (187)
447 3ge5_A Putative NAD(P)H:FMN ox 33.9 26 0.00087 19.9 2.0 45 19-63 128-173 (198)
448 3vni_A Xylose isomerase domain 33.9 71 0.0024 18.5 7.4 39 17-55 17-60 (294)
449 4eo3_A Bacterioferritin comigr 33.9 40 0.0014 20.8 3.0 44 20-63 246-290 (322)
450 1rlk_A Hypothetical protein TA 33.7 56 0.0019 17.3 5.1 34 20-53 40-73 (117)
451 2wvv_A Alpha-L-fucosidase; alp 33.6 38 0.0013 22.1 3.0 21 18-38 79-99 (450)
452 3exr_A RMPD (hexulose-6-phosph 33.6 72 0.0025 18.5 6.6 45 3-54 62-107 (221)
453 3opy_A 6-phosphofructo-1-kinas 33.5 1.1E+02 0.0039 22.4 5.5 46 17-63 675-724 (989)
454 3k6s_B Integrin beta-2; cell r 33.4 57 0.0019 22.7 3.9 34 5-38 261-301 (687)
455 3mc1_A Predicted phosphatase, 33.4 60 0.0021 17.6 4.1 34 15-48 87-120 (226)
456 1mhs_A Proton pump, plasma mem 33.3 49 0.0017 23.7 3.6 33 14-46 535-567 (920)
457 3rfu_A Copper efflux ATPase; a 33.2 83 0.0028 21.9 4.7 29 14-42 554-582 (736)
458 1qtw_A Endonuclease IV; DNA re 33.1 72 0.0024 18.3 6.1 39 17-55 12-60 (285)
459 1i4n_A Indole-3-glycerol phosp 33.1 54 0.0018 19.8 3.4 13 26-38 119-131 (251)
460 3b8c_A ATPase 2, plasma membra 33.0 41 0.0014 23.9 3.2 29 15-43 489-517 (885)
461 1fj2_A Protein (acyl protein t 32.9 61 0.0021 17.5 4.5 46 19-65 98-146 (232)
462 4ew6_A D-galactose-1-dehydroge 32.8 77 0.0026 19.3 4.2 33 21-54 96-131 (330)
463 3lmz_A Putative sugar isomeras 32.7 72 0.0025 18.2 7.0 38 18-55 31-74 (257)
464 3f9r_A Phosphomannomutase; try 32.6 69 0.0024 18.5 3.8 32 17-48 24-55 (246)
465 4gop_A Putative uncharacterize 32.6 11 0.00038 20.1 0.3 21 39-59 91-111 (114)
466 3oa2_A WBPB; oxidoreductase, s 32.6 84 0.0029 19.0 4.3 17 38-54 107-123 (318)
467 3abi_A Putative uncharacterize 32.5 32 0.0011 21.3 2.4 37 18-54 113-150 (365)
468 4awe_A Endo-beta-D-1,4-mannana 32.4 76 0.0026 18.4 5.1 16 18-33 38-53 (387)
469 1dbt_A Orotidine 5'-phosphate 32.4 77 0.0026 18.5 4.5 48 3-54 58-106 (239)
470 2a3l_A AMP deaminase, AMPD; at 32.3 12 0.00042 26.0 0.5 11 4-14 250-260 (701)
471 2p2s_A Putative oxidoreductase 32.2 85 0.0029 18.9 4.3 11 21-31 108-118 (336)
472 3ivs_A Homocitrate synthase, m 32.2 1.1E+02 0.0036 20.0 5.0 43 21-65 184-230 (423)
473 2csu_A 457AA long hypothetical 31.9 66 0.0023 20.9 3.9 36 19-54 77-120 (457)
474 1tlt_A Putative oxidoreductase 31.9 84 0.0029 18.8 5.4 43 19-62 78-122 (319)
475 1vfr_A NAD(P)H\:FMN oxidoreduc 31.8 33 0.0011 19.2 2.3 45 19-63 147-193 (218)
476 1s3l_A Hypothetical protein MJ 31.8 46 0.0016 18.6 2.9 45 18-64 40-85 (190)
477 4dw8_A Haloacid dehalogenase-l 31.8 75 0.0026 18.2 4.0 32 17-48 25-56 (279)
478 2vo9_A EAD500, L-alanyl-D-glut 31.7 74 0.0025 18.1 4.1 22 18-39 40-61 (179)
479 2fpr_A Histidine biosynthesis 31.7 65 0.0022 17.5 3.8 24 15-38 43-66 (176)
480 2no4_A (S)-2-haloacid dehaloge 31.6 69 0.0024 17.7 5.0 33 16-48 107-139 (240)
481 2h9a_B CO dehydrogenase/acetyl 31.6 95 0.0032 19.3 4.4 36 20-55 137-173 (310)
482 3da8_A Probable 5'-phosphoribo 31.6 71 0.0024 18.7 3.7 15 21-35 51-65 (215)
483 3t9y_A Acetyltransferase, GNAT 31.6 49 0.0017 16.4 2.8 37 19-55 102-138 (150)
484 3ewb_X 2-isopropylmalate synth 31.5 90 0.0031 19.0 6.0 47 19-65 152-204 (293)
485 1vjr_A 4-nitrophenylphosphatas 31.4 75 0.0026 18.1 4.1 21 17-37 36-56 (271)
486 3dv9_A Beta-phosphoglucomutase 31.4 68 0.0023 17.6 3.8 34 15-48 109-142 (247)
487 3sd7_A Putative phosphatase; s 31.2 70 0.0024 17.6 4.2 34 15-48 111-144 (240)
488 1q0q_A 1-deoxy-D-xylulose 5-ph 31.2 96 0.0033 20.3 4.5 27 30-56 8-34 (406)
489 1lc0_A Biliverdin reductase A; 31.2 86 0.003 18.7 5.5 34 20-54 79-115 (294)
490 3s6j_A Hydrolase, haloacid deh 31.1 67 0.0023 17.4 4.9 33 16-48 93-125 (233)
491 3opy_A 6-phosphofructo-1-kinas 31.1 1.6E+02 0.0054 21.7 6.5 35 19-54 293-327 (989)
492 3cny_A Inositol catabolism pro 31.0 78 0.0027 18.3 3.9 15 19-33 33-47 (301)
493 1tqh_A Carboxylesterase precur 31.0 73 0.0025 17.8 4.4 35 20-55 74-108 (247)
494 3ndo_A Deoxyribose-phosphate a 31.0 72 0.0025 19.1 3.7 42 3-48 16-57 (231)
495 3ky8_A Putative riboflavin bio 30.9 65 0.0022 18.4 3.4 24 16-39 112-135 (197)
496 1qpo_A Quinolinate acid phosph 30.9 94 0.0032 19.0 5.6 45 21-65 205-252 (284)
497 1zh8_A Oxidoreductase; TM0312, 30.9 92 0.0031 18.9 5.4 34 20-54 96-132 (340)
498 2ioj_A Hypothetical protein AF 30.9 26 0.00089 18.7 1.6 35 18-53 61-96 (139)
499 1j5p_A Aspartate dehydrogenase 30.9 91 0.0031 18.9 4.4 48 18-65 72-123 (253)
500 1wdi_A Hypothetical protein TT 30.8 22 0.00077 22.7 1.5 22 18-40 238-259 (345)
No 1
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=99.90 E-value=4e-24 Score=132.89 Aligned_cols=66 Identities=18% Similarity=0.374 Sum_probs=64.1
Q ss_pred CceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC----eEeeeeecCC
Q 035377 1 MKLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS----VIPCFGVHPW 66 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~----i~~~~GiHP~ 66 (66)
|++||+||||+...|.+|+++++++|+++||.+++++|+++++++++++|+++||+ +|+++|+|||
T Consensus 1 M~~iD~H~HL~~~~~~~d~~~vl~~a~~~gV~~~v~~g~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~ 70 (287)
T 3rcm_A 1 MQLIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTGTSLAVSEQALELCQQLDASGAHLFATAGVHPH 70 (287)
T ss_dssp CCEEEEEECTTCGGGTTCHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHCTTSSSEEEEECCCGG
T ss_pred CceEEEeecCCchhcccCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHhCCCCCceEEEEEEECcC
Confidence 89999999999999999999999999999999999999999999999999999998 9999999996
No 2
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=99.89 E-value=8.5e-24 Score=133.45 Aligned_cols=66 Identities=15% Similarity=0.305 Sum_probs=63.7
Q ss_pred CceEeeccCCCCCcC----------CCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC-----CeEeeeeecC
Q 035377 1 MKLFDAHCHLQDPRI----------FHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP-----SVIPCFGVHP 65 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~----------~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~-----~i~~~~GiHP 65 (66)
|++||+||||+++.| .+|+++++++|+++||.+++++|+++++++++++|+++|| ++|+++|+||
T Consensus 26 m~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g~~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP 105 (325)
T 3ipw_A 26 QQFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSGCLNDFKKAIEIINKYQNLTNIKLVTTIGVHP 105 (325)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHGGGCSSEEEEEECCCG
T ss_pred CCeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEccCCHHHHHHHHHHHHHCCCcccceEEEEEEECc
Confidence 689999999999999 8899999999999999999999999999999999999999 8999999999
Q ss_pred C
Q 035377 66 W 66 (66)
Q Consensus 66 ~ 66 (66)
|
T Consensus 106 ~ 106 (325)
T 3ipw_A 106 T 106 (325)
T ss_dssp G
T ss_pred c
Confidence 7
No 3
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=99.86 E-value=1.1e-22 Score=124.77 Aligned_cols=62 Identities=19% Similarity=0.343 Sum_probs=56.7
Q ss_pred CceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 1 MKLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
|++|||||||+. .+|+++++++|+++||..++ +|+++++++++++|+++||++|+++|+|||
T Consensus 1 m~liDtH~HL~~---~~d~~~vl~~a~~~gV~~i~-v~~~~~~~~~~~~la~~~~~v~~~~GiHP~ 62 (254)
T 3gg7_A 1 MSLIDFHVHLDL---YPDPVAVARACEERQLTVLS-VTTTPAAWRGTLALAAGRPHVWTALGFHPE 62 (254)
T ss_dssp -CCEEEEECGGG---SSSHHHHHHHHHHTTCEEEE-CCSSGGGHHHHHGGGTTCTTEEECBCCCGG
T ss_pred CceEEEeeCCCC---CCCHHHHHHHHHHCCCcEEE-ecCCHHHHHHHHHHHHhCCCeEEEEeeCcc
Confidence 889999999985 45899999999999999765 699999999999999999999999999997
No 4
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.7e-21 Score=125.69 Aligned_cols=66 Identities=21% Similarity=0.314 Sum_probs=62.1
Q ss_pred CceEeeccCCCCCcCC----------CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC-----eEeeeeecC
Q 035377 1 MKLFDAHCHLQDPRIF----------HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS-----VIPCFGVHP 65 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~----------~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~-----i~~~~GiHP 65 (66)
|++||+||||+++.|. .|++++++||+++||.+++++|+++++++++++|+++||+ +|+++|+||
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g~~l~~s~~~~~La~~~~~~~~~~l~~tvGvHP 91 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIAESQSAIELVSSVKDLSPLKLYHTIGVHP 91 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHTTTCSSEEEEEECCCG
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEecCCHHHHHHHHHHHHHCCCccccceEEEEEECc
Confidence 5799999999988875 7999999999999999999999999999999999999998 599999999
Q ss_pred C
Q 035377 66 W 66 (66)
Q Consensus 66 ~ 66 (66)
+
T Consensus 92 ~ 92 (401)
T 3e2v_A 92 C 92 (401)
T ss_dssp G
T ss_pred C
Confidence 6
No 5
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=99.84 E-value=3.1e-21 Score=119.59 Aligned_cols=66 Identities=24% Similarity=0.378 Sum_probs=62.6
Q ss_pred CceEeeccCCCCCcCC----------CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 1 MKLFDAHCHLQDPRIF----------HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~----------~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
|++||+||||+.+.+. .+.++++++++++||.+++++|++++++++++++++++|++++++|+|||
T Consensus 1 ~~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~~~~~~~~~~~la~~~~~v~~~~GiHP~ 76 (301)
T 2xio_A 1 MKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQTNGMFFSTVGCHPT 76 (301)
T ss_dssp CCEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCCSHHHHHHHHHHHTTCTTEEEEECCCGG
T ss_pred CeEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHHHHHHCCCEEEEEEECcC
Confidence 7899999999988776 68999999999999999999999999999999999999999999999996
No 6
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=99.83 E-value=1.2e-20 Score=113.96 Aligned_cols=66 Identities=21% Similarity=0.422 Sum_probs=62.6
Q ss_pred CceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 1 MKLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
|++||+|||++...+..+.++++++++++||..++++|+++++++++.++++++|++++++|+|||
T Consensus 3 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~G~hP~ 68 (259)
T 1zzm_A 3 CRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALGLHPG 68 (259)
T ss_dssp CCEEESCBCTTSTTTTTCHHHHHHHHHHTTEEEEEEECCSGGGHHHHHHHHHHCTTEEEEECCCGG
T ss_pred ceEEEeeecCCchhhccCHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 679999999998888889999999999999999999999999999999999999999999999996
No 7
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=99.83 E-value=1.2e-20 Score=114.19 Aligned_cols=66 Identities=18% Similarity=0.370 Sum_probs=61.0
Q ss_pred CceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 1 MKLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
|++||+|||++...+..+.++++++++++||.+++++|++++++++++++++++|++++++|+|||
T Consensus 3 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~i~~~~G~hP~ 68 (264)
T 1xwy_A 3 YRMFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHPH 68 (264)
T ss_dssp --CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHSTTEEEEECCCGG
T ss_pred CcEEEEeeCCCChhhccCHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHHHHHhCCCEEEEEEECCc
Confidence 568999999998777789999999999999999999999999999999999999999999999996
No 8
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=99.83 E-value=1.9e-20 Score=113.91 Aligned_cols=66 Identities=27% Similarity=0.585 Sum_probs=62.2
Q ss_pred CceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC-eEeeeeecCC
Q 035377 1 MKLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS-VIPCFGVHPW 66 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~-i~~~~GiHP~ 66 (66)
|++||+|||++...+..+.++++++++++||.+++++|++++++++++++++++|. +++++|+|||
T Consensus 4 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~~i~~~~GihP~ 70 (272)
T 2y1h_A 4 VGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPV 70 (272)
T ss_dssp CCEEEEEECTTSGGGTTTHHHHHHHHHHTTEEEEEECCSSGGGHHHHHHHHHHTTTTEEEEECCCSB
T ss_pred CcEEEEeeCCCchhhhcCHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEEECCC
Confidence 67999999999888888999999999999999999999999999999999999995 9999999996
No 9
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=99.78 E-value=2.5e-19 Score=108.07 Aligned_cols=66 Identities=23% Similarity=0.387 Sum_probs=61.7
Q ss_pred CceEeeccCCCCCcC---CCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 1 MKLFDAHCHLQDPRI---FHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~---~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
|++||+|||++...+ ..+.++++++++++||.+++++++++++++.+.++++++|++++++|+||+
T Consensus 1 m~~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~~~~~~p~~~~~~g~hP~ 69 (265)
T 1yix_A 1 MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPSYLHMRDLVGERDNVVFSCGVHPL 69 (265)
T ss_dssp CCEEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECCSSHHHHHHHHHHHCSCTTEEEEECCCTT
T ss_pred CcEEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEEEeCCC
Confidence 789999999987666 678999999999999999999999999999999999999999999999996
No 10
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=99.76 E-value=5.3e-19 Score=107.86 Aligned_cols=64 Identities=23% Similarity=0.326 Sum_probs=61.6
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
++|+||||+.+.+..+.++++++++++||.+++++++++++++++.++++++|++++++|+|||
T Consensus 13 ~~~~~~hl~~~~~~~~~~~~l~~~~~~GV~~~v~~~~~~~~~~~~~~l~~~~p~i~~~~G~hP~ 76 (268)
T 1j6o_A 13 MVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGVNLEDSKKSLDLSKTSDRIFCSVGVHPH 76 (268)
T ss_dssp EEEEEECTTSGGGTTTHHHHHHTTTTTTEEEEEEECSSHHHHHHHHHHHTTCTTEEEEECCCGG
T ss_pred ccccccCCCChhhccCHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCEEEEEeeccc
Confidence 7999999999999999999999999999999999999999999999999999999999999996
No 11
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=99.71 E-value=2.8e-17 Score=98.99 Aligned_cols=65 Identities=22% Similarity=0.308 Sum_probs=60.4
Q ss_pred ceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 2 KLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
++||+|||++...+..+.++++++++++||.+++++++++++++.+.++++++|++++++|+||+
T Consensus 1 m~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~~~~~~p~~~~~~g~~P~ 65 (265)
T 2gzx_A 1 MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFNKSTIERAMKLIDEYDFLYGIIGWHPV 65 (265)
T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHHHHHCTTEEEEECCCGG
T ss_pred CeEEEeeCCCCcccccCHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHhCCCEEEEEEeccC
Confidence 38999999998777778999999999999999999999999999999999999999999999996
No 12
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=99.70 E-value=2.9e-18 Score=105.39 Aligned_cols=60 Identities=17% Similarity=0.307 Sum_probs=49.4
Q ss_pred ceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccCh----------hhHHHHHH----HHHhCC-CeEeeeeecCC
Q 035377 2 KLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSE----------EDWNLVKD----MSERHP-SVIPCFGVHPW 66 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~----------~~~~~~~~----l~~~~~-~i~~~~GiHP~ 66 (66)
|+|||||||+...+ +.+++|+++||.+++++|+++ ++|+++++ +++++| ++|+++|+|||
T Consensus 1 m~iDtH~Hld~~~~-----~~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~GiHP~ 75 (261)
T 3guw_A 1 MYFDSHLHSEGLGF-----SELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGIHPR 75 (261)
T ss_dssp -CCBCCCCGGGCCH-----HHHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCCCGG
T ss_pred CeEEeccCCCCCCh-----HHHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEECcc
Confidence 38999999986553 358999999999999999886 45777775 477887 69999999996
No 13
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=99.55 E-value=1e-14 Score=89.90 Aligned_cols=66 Identities=14% Similarity=0.061 Sum_probs=56.6
Q ss_pred CceEeeccCCCCCcC------------CCCHHHHHHHHHhcCCcEEEeeccCh--hhHHHHHHHHHhCCC-eEeeeeecC
Q 035377 1 MKLFDAHCHLQDPRI------------FHKAPQLIATTVNSGVLHFAVNGVSE--EDWNLVKDMSERHPS-VIPCFGVHP 65 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~------------~~~~~~~~~~~~~~gv~~~~~~~~~~--~~~~~~~~l~~~~~~-i~~~~GiHP 65 (66)
|++||+|||++.+.| ..++++++++++++||+++++++.+. .+++.++++++++|. +++.+|+||
T Consensus 25 ~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~~~~n~~~~~~~~~~p~r~~g~~~v~P 104 (294)
T 4i6k_A 25 MNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTNNQAMLNAIQQYPDRLKGIAVVQH 104 (294)
T ss_dssp CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGGTTCCHHHHHHHHHSTTTEEEEECCCT
T ss_pred CCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcccccchHHHHHHHHHCCCeEEEEEEeCC
Confidence 568999999988766 46899999999999999999988765 456778999999985 888899999
Q ss_pred C
Q 035377 66 W 66 (66)
Q Consensus 66 ~ 66 (66)
.
T Consensus 105 ~ 105 (294)
T 4i6k_A 105 T 105 (294)
T ss_dssp T
T ss_pred c
Confidence 4
No 14
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=99.50 E-value=5.3e-15 Score=92.83 Aligned_cols=65 Identities=12% Similarity=0.125 Sum_probs=53.1
Q ss_pred CceEeeccCCCC--CcC-----C-----CCHHH-H---HHHHHhcCCcEEEeeccC--hhhHHHHHHHHHhCC-CeEeee
Q 035377 1 MKLFDAHCHLQD--PRI-----F-----HKAPQ-L---IATTVNSGVLHFAVNGVS--EEDWNLVKDMSERHP-SVIPCF 61 (66)
Q Consensus 1 m~~iDsH~Hl~~--~~~-----~-----~~~~~-~---~~~~~~~gv~~~~~~~~~--~~~~~~~~~l~~~~~-~i~~~~ 61 (66)
|.+||+||||+. ..+ . .+.+. + +++++++||..++.+|++ .++++.+.+++++++ ++|+++
T Consensus 15 lGliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~~~ 94 (330)
T 2ob3_A 15 AGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAAT 94 (330)
T ss_dssp HCSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEECEE
T ss_pred CCCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEEEe
Confidence 458999999975 443 2 34444 4 899999999999999986 478999999999998 799999
Q ss_pred eecC
Q 035377 62 GVHP 65 (66)
Q Consensus 62 GiHP 65 (66)
|+||
T Consensus 95 G~hp 98 (330)
T 2ob3_A 95 GLWF 98 (330)
T ss_dssp ECCS
T ss_pred cCCc
Confidence 9994
No 15
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=99.46 E-value=1.2e-13 Score=83.78 Aligned_cols=60 Identities=20% Similarity=0.192 Sum_probs=52.2
Q ss_pred ceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChh----------------------------------hHHHH
Q 035377 2 KLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEE----------------------------------DWNLV 47 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~----------------------------------~~~~~ 47 (66)
++||+|||++. +.++++++++++||.+.+++++.+. +++.+
T Consensus 3 m~iD~H~Hl~~-----~~~~~l~~m~~~Gv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~n~~~ 77 (272)
T 3cjp_A 3 LIIDGHTHVIL-----PVEKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSIKEL 77 (272)
T ss_dssp CCEEEEEECCS-----SHHHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHHHHH
T ss_pred eEEEehhhcCC-----CHHHHHHHHHHcCCCEEEEeCCCCCccccchhhhhhhhhhcccccccCCchhhHHHHHhhHHHH
Confidence 48999999975 3589999999999999888887554 68889
Q ss_pred HHHHHhCCCeEeeeeecCC
Q 035377 48 KDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 48 ~~l~~~~~~i~~~~GiHP~ 66 (66)
.++++++|+.+.++|+||+
T Consensus 78 ~~~~~~~p~~~~~~g~~p~ 96 (272)
T 3cjp_A 78 TNVIQAYPSRYVGFGNVPV 96 (272)
T ss_dssp HHHHHHSTTTEEEEECCCT
T ss_pred HHHHHhCCCeEEEEEEeCC
Confidence 9999999999999999995
No 16
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=99.43 E-value=5.7e-14 Score=86.48 Aligned_cols=66 Identities=12% Similarity=0.176 Sum_probs=52.1
Q ss_pred CceEeeccCCCC--CcC-----C-----CCHHHH---HHHHHhcCCcEEEeeccC--hhhHHHHHHHHHhCC-CeEeeee
Q 035377 1 MKLFDAHCHLQD--PRI-----F-----HKAPQL---IATTVNSGVLHFAVNGVS--EEDWNLVKDMSERHP-SVIPCFG 62 (66)
Q Consensus 1 m~~iDsH~Hl~~--~~~-----~-----~~~~~~---~~~~~~~gv~~~~~~~~~--~~~~~~~~~l~~~~~-~i~~~~G 62 (66)
|.+||+|||++. ..+ . .+.+.+ +++++++||..++.++++ ..+++.+.+++++++ ++++++|
T Consensus 16 ~G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G 95 (314)
T 2vc7_A 16 IGFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTG 95 (314)
T ss_dssp CCSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEE
T ss_pred cCCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEee
Confidence 468999999974 333 1 233444 488999999999998876 466888999999988 6999999
Q ss_pred ecCC
Q 035377 63 VHPW 66 (66)
Q Consensus 63 iHP~ 66 (66)
+||+
T Consensus 96 ~hp~ 99 (314)
T 2vc7_A 96 IYIY 99 (314)
T ss_dssp BCCS
T ss_pred cCCC
Confidence 9995
No 17
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=99.42 E-value=2.2e-13 Score=83.30 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=53.8
Q ss_pred CceEeeccCCCCCcCC------------------CCHHHHHHHHHhcCCcEEEeeccC---------------hhhHHHH
Q 035377 1 MKLFDAHCHLQDPRIF------------------HKAPQLIATTVNSGVLHFAVNGVS---------------EEDWNLV 47 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~------------------~~~~~~~~~~~~~gv~~~~~~~~~---------------~~~~~~~ 47 (66)
|++||+|||+..+.+. .+.+++++++++.||++.+++++. ...++.+
T Consensus 1 m~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~ 80 (307)
T 2f6k_A 1 MSKIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSILSLSSPHVNFGDKAETIRLVEAANDDG 80 (307)
T ss_dssp -CEEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEEECCSSCSCSSCHHHHHHHHHHHHHHH
T ss_pred CCeEEEecCcCCHHHHHHHHHhccCCcccCcCCCCCHHHHHHHHHHcCCCEEEEeCCCcccccCCHHHHHHHHHHHHHHH
Confidence 7899999999875432 578999999999999998777652 2567788
Q ss_pred HHHHHhCCCeEeeeeecC
Q 035377 48 KDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 48 ~~l~~~~~~i~~~~GiHP 65 (66)
.++++++|+.+.++|+||
T Consensus 81 ~~~~~~~p~r~~~~~~~p 98 (307)
T 2f6k_A 81 KSLAQQYPDQLGYLASLP 98 (307)
T ss_dssp HHHHHHCTTTEEEEECCC
T ss_pred HHHHHhCccceeEEEeCC
Confidence 999999999999999998
No 18
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=99.37 E-value=3e-13 Score=82.33 Aligned_cols=66 Identities=11% Similarity=0.050 Sum_probs=55.3
Q ss_pred CceEeeccCCCCCcC------------CCCHHHHHHHHHhcCCcEEEeecc--ChhhHHHHHHHHHhCCC-eEeeeeecC
Q 035377 1 MKLFDAHCHLQDPRI------------FHKAPQLIATTVNSGVLHFAVNGV--SEEDWNLVKDMSERHPS-VIPCFGVHP 65 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~------------~~~~~~~~~~~~~~gv~~~~~~~~--~~~~~~~~~~l~~~~~~-i~~~~GiHP 65 (66)
|++||+|||+....+ ..+.+++++++++.||.+.++++. ...+++.++++++++|+ +++++|+||
T Consensus 12 ~~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~~~~~~~p~r~~~~~~v~p 91 (288)
T 2ffi_A 12 LTAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSALQTVPGQLRGVVMLER 91 (288)
T ss_dssp CCCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHHHHHSTTTBCCBBCCCS
T ss_pred CCceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccHHHHHHHHHHCCCCEEEEEEeCC
Confidence 568999999986543 357899999999999999888775 35678889999999996 889999999
Q ss_pred C
Q 035377 66 W 66 (66)
Q Consensus 66 ~ 66 (66)
.
T Consensus 92 ~ 92 (288)
T 2ffi_A 92 D 92 (288)
T ss_dssp S
T ss_pred C
Confidence 4
No 19
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=99.33 E-value=7e-13 Score=81.66 Aligned_cols=65 Identities=6% Similarity=0.083 Sum_probs=52.7
Q ss_pred ceEeeccCCCCCcCCC-------------------CH-HHHHHHHHhcCCcEEEeeccCh----------------hhHH
Q 035377 2 KLFDAHCHLQDPRIFH-------------------KA-PQLIATTVNSGVLHFAVNGVSE----------------EDWN 45 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~~-------------------~~-~~~~~~~~~~gv~~~~~~~~~~----------------~~~~ 45 (66)
++||+|||+..+.+.. ++ +++++++++.||.+.+++++.+ ..++
T Consensus 3 ~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~p~~~~~~d~~~~~~~~~~~n~ 82 (327)
T 2dvt_A 3 GKVALEEHFAIPETLQDSAGFVPGDYWKELQHRLLDIQDTRLKLMDAHGIETMILSLNAPAVQAIPDRRKAIEIARRAND 82 (327)
T ss_dssp SEEEEEEEECCHHHHGGGTTTSCSSHHHHHHHHHHCSSSHHHHHHHHTTEEEEEEEECSSGGGGCCCHHHHHHHHHHHHH
T ss_pred CeEEEecccCCHHHHHHHhccCCcccccccchhcCChhHHHHHHhhhcCCcEEEEeCCCCcccccCChHHHHHHHHHHHH
Confidence 4899999998655422 55 8899999999999988877554 5677
Q ss_pred HHHHHHHhCCC-eEeeeeecCC
Q 035377 46 LVKDMSERHPS-VIPCFGVHPW 66 (66)
Q Consensus 46 ~~~~l~~~~~~-i~~~~GiHP~ 66 (66)
.+.++++++|+ +++.+|+||+
T Consensus 83 ~~~~~~~~~p~r~~~~~~v~p~ 104 (327)
T 2dvt_A 83 VLAEECAKRPDRFLAFAALPLQ 104 (327)
T ss_dssp HHHHHHHHCTTTEEEEECCCTT
T ss_pred HHHHHHhhCCCceEEEeecCcC
Confidence 89999999997 6688999985
No 20
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=99.23 E-value=4.3e-11 Score=73.93 Aligned_cols=65 Identities=11% Similarity=0.048 Sum_probs=53.1
Q ss_pred CceEeeccCCCCCc------C---------CCCHHHHHHHHHhcCCcEEEeeccC--hhhHHHHHHHHHhCCCeEeeeee
Q 035377 1 MKLFDAHCHLQDPR------I---------FHKAPQLIATTVNSGVLHFAVNGVS--EEDWNLVKDMSERHPSVIPCFGV 63 (66)
Q Consensus 1 m~~iDsH~Hl~~~~------~---------~~~~~~~~~~~~~~gv~~~~~~~~~--~~~~~~~~~l~~~~~~i~~~~Gi 63 (66)
|++||+|+|+.... . ...++++++++++.||+++++++++ ..+++.++++++++|++++++|+
T Consensus 3 ~m~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~~~~~~~~n~~l~~la~~~p~~~g~vg~ 82 (303)
T 4do7_A 3 ALRIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEARIAAVVGW 82 (303)
T ss_dssp CCCEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEECCSSSHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred CcEEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEccCCcHHHHHHHHHHHHhCCCeEEEEEE
Confidence 45799999996431 1 1368999999999999999998875 46789999999999999999995
Q ss_pred cC
Q 035377 64 HP 65 (66)
Q Consensus 64 HP 65 (66)
+|
T Consensus 83 v~ 84 (303)
T 4do7_A 83 ED 84 (303)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 21
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=99.12 E-value=2.2e-10 Score=70.57 Aligned_cols=66 Identities=11% Similarity=0.104 Sum_probs=55.4
Q ss_pred CceEeeccCCCCCcCC----------------------------CCHHHHHHHHHhcCCcEEEeeccCh-----hhHHHH
Q 035377 1 MKLFDAHCHLQDPRIF----------------------------HKAPQLIATTVNSGVLHFAVNGVSE-----EDWNLV 47 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~----------------------------~~~~~~~~~~~~~gv~~~~~~~~~~-----~~~~~~ 47 (66)
|++||+|+|....++. .+.++++++++++||++.++++++. .+++.+
T Consensus 3 ~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~md~~GV~~~V~~~~~~~~~~~~~N~~~ 82 (291)
T 3irs_A 3 LKIIDFRLRPPAMGFLNARIYTRPDIRNRFTRQLGFEPAPSAEEKSLELMFEEMAAAGIEQGVCVGRNSSVLGSVSNADV 82 (291)
T ss_dssp CCCEESSBCCSSGGGGGSHHHHCHHHHHHHHHHHTCCCCHHHHHTCHHHHHHHHHHTTCCEEEEECCEETTTEECCHHHH
T ss_pred cceEEEecCCCchHhhccccccccccccchhhccCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEcCCCccccccccHHHH
Confidence 7899999997542221 3788999999999999998888764 678999
Q ss_pred HHHHHhCCC-eEeeeeecCC
Q 035377 48 KDMSERHPS-VIPCFGVHPW 66 (66)
Q Consensus 48 ~~l~~~~~~-i~~~~GiHP~ 66 (66)
.++++++|+ +++++|+||+
T Consensus 83 ~~~~~~~p~r~~~~~~v~p~ 102 (291)
T 3irs_A 83 AAVAKAYPDKFHPVGSIEAA 102 (291)
T ss_dssp HHHHHHSTTTEEEEEECCCS
T ss_pred HHHHHHCCCcEEEEEecCcc
Confidence 999999996 9999999995
No 22
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.95 E-value=3.1e-10 Score=68.77 Aligned_cols=65 Identities=18% Similarity=0.160 Sum_probs=49.4
Q ss_pred ceEeeccCCCCCc--C-------CC---CHHHHHHHHHhcCCcEEEeeccC-h-hhHHHHHHHHHhCC-CeEeeeee---
Q 035377 2 KLFDAHCHLQDPR--I-------FH---KAPQLIATTVNSGVLHFAVNGVS-E-EDWNLVKDMSERHP-SVIPCFGV--- 63 (66)
Q Consensus 2 ~~iDsH~Hl~~~~--~-------~~---~~~~~~~~~~~~gv~~~~~~~~~-~-~~~~~~~~l~~~~~-~i~~~~Gi--- 63 (66)
.+||+|+|+.... + .. ...+.++++.+.||..++.++++ . .+++.+.+++++++ ++++++|+
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~~~ 85 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQD 85 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCG
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeeccccC
Confidence 4799999996311 1 01 23456778889999999988875 4 36888999999886 69999999
Q ss_pred --cCC
Q 035377 64 --HPW 66 (66)
Q Consensus 64 --HP~ 66 (66)
||+
T Consensus 86 ~~hP~ 90 (291)
T 1bf6_A 86 AFFPE 90 (291)
T ss_dssp GGCCT
T ss_pred ccCcH
Confidence 995
No 23
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=98.77 E-value=2.2e-08 Score=62.18 Aligned_cols=48 Identities=10% Similarity=-0.003 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcCCcEEEeecc--------Ch--------hhHHHHHHHHHhCCC-eEeeeeecCC
Q 035377 19 APQLIATTVNSGVLHFAVNGV--------SE--------EDWNLVKDMSERHPS-VIPCFGVHPW 66 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~--------~~--------~~~~~~~~l~~~~~~-i~~~~GiHP~ 66 (66)
.+++++++++.||.+.+++++ ++ ..++.+.++++++|+ +.+.+++||+
T Consensus 60 ~~~~l~~m~~~GV~~~V~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~l~~~ 124 (334)
T 2hbv_A 60 PAFRIEEMDAQGVDVQVTCATPVMFGYTWEANKAAQWAERMNDFALEFAAHNPQRIKVLAQVPLQ 124 (334)
T ss_dssp HHHHHHHHHHHTCSEEEEEECGGGCCTTSCHHHHHHHHHHHHHHHHHHHTTCTTTEEECBCCCTT
T ss_pred HHHHHHHHHHCCCCEEEECCCchhccCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEecCcc
Confidence 689999999999999777754 22 455778899999997 5556778874
No 24
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=98.60 E-value=1.9e-07 Score=57.90 Aligned_cols=48 Identities=15% Similarity=-0.065 Sum_probs=37.4
Q ss_pred HHHHHHHHHhcCCcEEEeeccC--------h--------hhHHHHHHHHHhCCC-eEeeeeecCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVS--------E--------EDWNLVKDMSERHPS-VIPCFGVHPW 66 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~--------~--------~~~~~~~~l~~~~~~-i~~~~GiHP~ 66 (66)
.+++++++++.||.+.+++++. + ..++.+.++++++|+ +.+.+++||+
T Consensus 56 ~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~l~~~ 120 (336)
T 2wm1_A 56 PEVRIREMDQKGVTVQALSTVPVMFSYWAKPEDTLNLCQLLNNDLASTVVSYPRRFVGLGTLPMQ 120 (336)
T ss_dssp HHHHHHHHHHHTCCEEEEECCGGGGCTTSCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEECCCTT
T ss_pred HHHHHHHHHHCCCCEEEECCCchhhcccCCHHHHHHHHHHHHHHHHHHHHhccCceeEEEeCCCc
Confidence 6899999999999998777542 2 346778899999998 5555578874
No 25
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.51 E-value=6e-08 Score=61.34 Aligned_cols=46 Identities=9% Similarity=0.085 Sum_probs=40.2
Q ss_pred HHHHHHHhcCCcEEEeeccC--hhhHHHHHHHHHhCC-CeEeeeeecCC
Q 035377 21 QLIATTVNSGVLHFAVNGVS--EEDWNLVKDMSERHP-SVIPCFGVHPW 66 (66)
Q Consensus 21 ~~~~~~~~~gv~~~~~~~~~--~~~~~~~~~l~~~~~-~i~~~~GiHP~ 66 (66)
+-+++++++||..++.++++ .++++.+.+++++++ +++.++|+||+
T Consensus 67 ~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG~hp~ 115 (339)
T 3gtx_A 67 ETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATGFYYE 115 (339)
T ss_dssp HHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEECCCCT
T ss_pred HHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcCCCcc
Confidence 45678899999999998864 589999999999987 79999999993
No 26
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=98.39 E-value=3.1e-07 Score=57.40 Aligned_cols=45 Identities=11% Similarity=0.006 Sum_probs=37.7
Q ss_pred HHHHHHHhcCCcEEEeeccCh-----------------hhHHHHHHHHHhCCCeEeeeeecC
Q 035377 21 QLIATTVNSGVLHFAVNGVSE-----------------EDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 21 ~~~~~~~~~gv~~~~~~~~~~-----------------~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
++++.+++.||++.+++++.. ..++.+.++++++|+.|.++|.+|
T Consensus 53 ~~l~~md~~GV~~~vl~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~rf~~~~~~p 114 (350)
T 2gwg_A 53 NQLKKMQERGSDLTVFSPRASFMAHHIGDFNVSSTWAAICNELCYRVSQLFPDNFIGAAMLP 114 (350)
T ss_dssp THHHHHHHHTCCEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECC
T ss_pred HHHHHHHHcCCeEEEEcCCchhhccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeCC
Confidence 668899999999988887654 567788899999999888899988
No 27
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=98.16 E-value=3e-06 Score=56.87 Aligned_cols=63 Identities=21% Similarity=0.208 Sum_probs=48.9
Q ss_pred ceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEe------eccChhhHHHHHHHHHhCC-CeEeee-eecCC
Q 035377 2 KLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAV------NGVSEEDWNLVKDMSERHP-SVIPCF-GVHPW 66 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~------~~~~~~~~~~~~~l~~~~~-~i~~~~-GiHP~ 66 (66)
.+||+|||+.... .+.++..+++...|+..++. ...+.+.++..++.+++.| +++.+. |+||.
T Consensus 90 G~ID~H~Hl~~~~--~~~~~~~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~p~~~P~ 160 (608)
T 3nqb_A 90 GLIDTHMHIESSM--ITPAAYAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPS 160 (608)
T ss_dssp CEEEEEECGGGGT--SCHHHHHHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECCCSSS
T ss_pred CeEecccCccccc--CCHHHHHHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEeccccCCC
Confidence 3899999997533 36788899999999998875 2345778888888888877 477777 88873
No 28
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=98.08 E-value=9e-06 Score=51.89 Aligned_cols=64 Identities=14% Similarity=0.194 Sum_probs=47.6
Q ss_pred ceEeeccCCCCCcCC--CCHHHHHHHHHhcCCcEEEeec-------cChhhHHHHHHHHHh--CCCeEeeeeecC
Q 035377 2 KLFDAHCHLQDPRIF--HKAPQLIATTVNSGVLHFAVNG-------VSEEDWNLVKDMSER--HPSVIPCFGVHP 65 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~--~~~~~~~~~~~~~gv~~~~~~~-------~~~~~~~~~~~l~~~--~~~i~~~~GiHP 65 (66)
.+||+|||+....+. +++....+.+...|+..++..+ .+.+.+....+.++. +.++.+..|++|
T Consensus 60 G~ID~H~H~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (448)
T 3hm7_A 60 GMVDVHVHFNEPGRTEWEGFASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVP 134 (448)
T ss_dssp CEEEEEECCCTTTSGGGCCSHHHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCT
T ss_pred CEEEeeeccCCCCCCcHhHHHHHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecc
Confidence 389999999865443 5778899999999999988876 346667776666655 335667777776
No 29
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=98.03 E-value=1.7e-05 Score=49.10 Aligned_cols=64 Identities=23% Similarity=0.221 Sum_probs=46.0
Q ss_pred ceEeeccCCCCC--cC-----------CCCHHHHHHHHHhcCCcEEEeeccC--hhhHHHHHHHHHhCCC-eEeeeeecC
Q 035377 2 KLFDAHCHLQDP--RI-----------FHKAPQLIATTVNSGVLHFAVNGVS--EEDWNLVKDMSERHPS-VIPCFGVHP 65 (66)
Q Consensus 2 ~~iDsH~Hl~~~--~~-----------~~~~~~~~~~~~~~gv~~~~~~~~~--~~~~~~~~~l~~~~~~-i~~~~GiHP 65 (66)
++||+|+|+... .| ....+++++.+++.||++.+++..+ ..+++.+++..+++|. +.+.+.+.|
T Consensus 26 ~~iDaH~H~~~~~~~~p~~~~~~~~~~~~~~e~l~~~m~~~GI~~~Vlvq~~~~~~dN~~ll~~l~~~~~r~~Gva~vdp 105 (303)
T 4d9a_A 26 GAIDAHCHVFGPMAQFPFSPKAKYLPRDAGPDMLFALRDHLGFARNVIVQASCHGTDNAATLDAIARAQGKARGIAVVDP 105 (303)
T ss_dssp TCEEEEECCBCCTTTSCCCTTCSCCBCCBCHHHHHHHHHHHTCSEEEEECCGGGTTCCHHHHHHHHHTTTSEEEEECCCT
T ss_pred CceEeeeEeecCcccCCCCCCCCCcCCCCCHHHHHHHHHHcCCCeEEEeccccccccHHHHHHHHHhCCCcEEEEEEeCC
Confidence 479999999742 11 1368999999999999998887653 3456777775556664 666667666
No 30
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=98.01 E-value=1.1e-05 Score=50.62 Aligned_cols=63 Identities=16% Similarity=0.201 Sum_probs=45.7
Q ss_pred eEeeccCCCCCcC--CCCHHHHHHHHHhcCCcEEEeecc-C-----hhhHHHHHHHHHhCC--CeEeeeeecC
Q 035377 3 LFDAHCHLQDPRI--FHKAPQLIATTVNSGVLHFAVNGV-S-----EEDWNLVKDMSERHP--SVIPCFGVHP 65 (66)
Q Consensus 3 ~iDsH~Hl~~~~~--~~~~~~~~~~~~~~gv~~~~~~~~-~-----~~~~~~~~~l~~~~~--~i~~~~GiHP 65 (66)
+||+|+|+....+ .++.....+.+...||..++..+. . .+.++...+.+++.+ ++++..++||
T Consensus 51 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (426)
T 2z00_A 51 FLDLHAHLREPGEEVKEDLFSGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAAALTE 123 (426)
T ss_dssp EEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBG
T ss_pred EEEeccccCCCCCCchHHHHHHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEEEeec
Confidence 8999999976332 457888889999999998887664 2 245666777777654 5766666765
No 31
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=98.00 E-value=3.9e-06 Score=51.97 Aligned_cols=61 Identities=18% Similarity=0.261 Sum_probs=41.8
Q ss_pred ceEeeccCCCCCc--CCCCHHHHHHHHHhcCCcEEEeeccC-hhhHHHHHHHHHhCC-CeEe-----eeeecC
Q 035377 2 KLFDAHCHLQDPR--IFHKAPQLIATTVNSGVLHFAVNGVS-EEDWNLVKDMSERHP-SVIP-----CFGVHP 65 (66)
Q Consensus 2 ~~iDsH~Hl~~~~--~~~~~~~~~~~~~~~gv~~~~~~~~~-~~~~~~~~~l~~~~~-~i~~-----~~GiHP 65 (66)
.+||+|||+.... +.+ ...+++...||..++.+++. +++++.+.++.++++ +++. ..|.||
T Consensus 55 G~ID~H~H~~~~~~~~~~---~~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~ 124 (379)
T 2ics_A 55 GWIDDHVHCFEKMALYYD---YPDEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVA 124 (379)
T ss_dssp CEEEEEECCCTTSSSSCC---CHHHHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESSTTTTSS
T ss_pred CEEEeccccCccCccccC---chhhhHhhCceeEEEcCCCCCccCHHHHHHHHHhhcccEEEEccccccCCCC
Confidence 3899999997532 222 23456788999998877643 677888888888776 3542 336676
No 32
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=97.89 E-value=9.4e-06 Score=51.75 Aligned_cols=46 Identities=13% Similarity=-0.007 Sum_probs=40.4
Q ss_pred HHHHHHHHHhcCCcEEEeeccC--hhhHHHHHHHHHhCC-CeEeeeeec
Q 035377 19 APQLIATTVNSGVLHFAVNGVS--EEDWNLVKDMSERHP-SVIPCFGVH 64 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~--~~~~~~~~~l~~~~~-~i~~~~GiH 64 (66)
.-+.+++++++||..++.++++ .+++..+.+++++++ +++++.|+|
T Consensus 88 ~~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y 136 (364)
T 3k2g_A 88 AIAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYY 136 (364)
T ss_dssp HHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBC
T ss_pred HHHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCcc
Confidence 3367788999999999998865 579999999999999 799999999
No 33
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=97.78 E-value=0.00011 Score=44.03 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=27.9
Q ss_pred eEeeccCCCCC-cCCCCHHHHHHHHHhcCCcEEEee
Q 035377 3 LFDAHCHLQDP-RIFHKAPQLIATTVNSGVLHFAVN 37 (66)
Q Consensus 3 ~iDsH~Hl~~~-~~~~~~~~~~~~~~~~gv~~~~~~ 37 (66)
++|.|||.... .-...+++++++|.+.|++.+.++
T Consensus 1 ~~DlH~Ht~~S~DG~~~~ee~v~~A~~~Gl~~iaiT 36 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEAYLEEARAKGLKGVVFT 36 (267)
T ss_dssp CEEEEECCGGGSSCCSCHHHHHHHHHHTTCSEEEEE
T ss_pred CCccCcCcCCCCCCCCCHHHHHHHHHHcCCCEEEEc
Confidence 48999998643 334579999999999999987653
No 34
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=97.75 E-value=0.00019 Score=44.29 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=37.7
Q ss_pred CceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeecc-ChhhHHHHHHHHHhC
Q 035377 1 MKLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGV-SEEDWNLVKDMSERH 54 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~-~~~~~~~~~~l~~~~ 54 (66)
|+++|.|||.....-...+++++++|.+.|++.+.++=- +...+.+..+.+++.
T Consensus 1 M~~~DLH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~ 55 (292)
T 2yb1_A 1 MANIDLHFHSRTSDGALTPTEVIDRAAARAPALLALTDHDCTGGLAEAAAAAARR 55 (292)
T ss_dssp -CCEECCBCCTTTTCSSCHHHHHHHHHTTCCSEEEECCBTCCTTHHHHHHHHHHT
T ss_pred CCccccccCCCccCCCCCHHHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHc
Confidence 789999999875544457999999999999997654311 233455556666664
No 35
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=97.71 E-value=2.2e-05 Score=48.79 Aligned_cols=65 Identities=11% Similarity=0.214 Sum_probs=44.0
Q ss_pred CceEeeccCCCCCcCC----------------------CCHHHHHHHHHhcCCcEEEeecc-Ch--------------hh
Q 035377 1 MKLFDAHCHLQDPRIF----------------------HKAPQLIATTVNSGVLHFAVNGV-SE--------------ED 43 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~----------------------~~~~~~~~~~~~~gv~~~~~~~~-~~--------------~~ 43 (66)
|+.||+|+|+..+.+. .|+++.++.+.+.||..++.... .. ..
T Consensus 3 ~~~ID~H~H~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~rl~~Md~~Gv~~vl~~~~~~~~~~~d~~~~~~~~r~~ 82 (312)
T 3ij6_A 3 LTKIDAYAHILPAKYYQKMLSVEPNIPNMFPFIKIKTLMDLDERLTKWPDQNTKQVISLANISPEDFTDSKTSAELCQSA 82 (312)
T ss_dssp CCEEEEEEEECCHHHHHHHHHHCTTHHHHCGGGGCHHHHCHHHHHHTCSCTTEEEEEEECSCCGGGTSCHHHHHHHHHHH
T ss_pred ceeEEeecccCChHHHHHHHHhCCCCCCCCCCCCCcccCCHHHHHHHHHHcCCeEEEECCCCcccccCCHHHHHHHHHHH
Confidence 6789999998643210 26778888899999976654322 11 24
Q ss_pred HHHHHHHHHhCCCeEe-eeeecC
Q 035377 44 WNLVKDMSERHPSVIP-CFGVHP 65 (66)
Q Consensus 44 ~~~~~~l~~~~~~i~~-~~GiHP 65 (66)
++.+.++++++|+.+. .+|+=|
T Consensus 83 N~~l~~~~~~~p~rf~g~~a~vp 105 (312)
T 3ij6_A 83 NEELSNLVDQHPGKFAGAVAILP 105 (312)
T ss_dssp HHHHHHHHHHCTTTEEEEEEECC
T ss_pred HHHHHHHHHhCCCceeeeEEecC
Confidence 6677888999998653 566544
No 36
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=97.62 E-value=8.9e-05 Score=43.97 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=28.7
Q ss_pred CceEeeccCCCCCc-CCCCHHHHHHHHHhcCCcEEEee
Q 035377 1 MKLFDAHCHLQDPR-IFHKAPQLIATTVNSGVLHFAVN 37 (66)
Q Consensus 1 m~~iDsH~Hl~~~~-~~~~~~~~~~~~~~~gv~~~~~~ 37 (66)
|+++|.|||..... -...+++++++|.+.|++.+.++
T Consensus 1 m~~~DlH~Ht~~Sd~g~~~~~e~v~~A~~~Gl~~iaiT 38 (245)
T 1m65_A 1 MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAIT 38 (245)
T ss_dssp -CCEECCBCCTTSTTCCCCHHHHHHHHHHHTCCEEEEE
T ss_pred CCceEeCcCCCCCCCCCCcHHHHHHHHHHCCCCEEEEC
Confidence 77899999986532 22378999999999999987653
No 37
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=97.61 E-value=0.00013 Score=46.28 Aligned_cols=48 Identities=8% Similarity=-0.019 Sum_probs=32.9
Q ss_pred CHHHHHHHHHhcCCcEEEeeccCh---------------hhHHHHHHHHHhCCC-eEeeeeecC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSE---------------EDWNLVKDMSERHPS-VIPCFGVHP 65 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~---------------~~~~~~~~l~~~~~~-i~~~~GiHP 65 (66)
+.++.++.+.+.||++.+++...+ ..++.+.++++++|+ +.+.+.+.|
T Consensus 74 ~~~~rl~~MD~~GI~~~Vls~~~~~~~~~~~~~a~~~~r~~Nd~l~~~~~~~P~Rf~g~a~v~~ 137 (357)
T 3nur_A 74 HHDERIQFMNNQDVQIQVLSYGNGSPSNLVGQKAIELCQKANDQLANYIAQYPNRFVGFATLPI 137 (357)
T ss_dssp CHHHHHHHHHHTTEEEEEEEECTTCGGGSCHHHHHHHHHHHHHHHHHHHHHSTTTEEECBCCCT
T ss_pred CHHHHHHHHHHCCCcEEEEeCCCCccccCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEeCCC
Confidence 457789999999998755432221 346678889999997 455555544
No 38
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=97.27 E-value=0.00017 Score=45.96 Aligned_cols=43 Identities=16% Similarity=0.111 Sum_probs=36.7
Q ss_pred HHHHHHhcCCcEEEeec-cC--hhhHHHHHHHHHhCC-CeEeeeeec
Q 035377 22 LIATTVNSGVLHFAVNG-VS--EEDWNLVKDMSERHP-SVIPCFGVH 64 (66)
Q Consensus 22 ~~~~~~~~gv~~~~~~~-~~--~~~~~~~~~l~~~~~-~i~~~~GiH 64 (66)
-+++++++||..++.++ ++ -++++.+.+++++++ +++.+.|+|
T Consensus 80 el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y 126 (365)
T 3rhg_A 80 ELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLY 126 (365)
T ss_dssp HHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCC
T ss_pred HHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCcc
Confidence 44788899999998887 42 369999999999998 799999999
No 39
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=97.20 E-value=0.00066 Score=43.54 Aligned_cols=63 Identities=19% Similarity=0.191 Sum_probs=42.6
Q ss_pred eEeeccCCCCCc--CCCCHHHHHHHHHhcCCcEEEeeccC------hhhHHHHHHHHHhC--CCeEeeeeecC
Q 035377 3 LFDAHCHLQDPR--IFHKAPQLIATTVNSGVLHFAVNGVS------EEDWNLVKDMSERH--PSVIPCFGVHP 65 (66)
Q Consensus 3 ~iDsH~Hl~~~~--~~~~~~~~~~~~~~~gv~~~~~~~~~------~~~~~~~~~l~~~~--~~i~~~~GiHP 65 (66)
+||+|+|+.... ..+++....+.+...||..++..+.. .+.++...+.+++. ++++++.+++|
T Consensus 102 lID~H~H~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 174 (467)
T 1xrt_A 102 FIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITK 174 (467)
T ss_dssp EEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBG
T ss_pred EEEEeecccCCCCCchhhHHHHHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEEeeecC
Confidence 899999997532 24577888888999999988876542 24556666666654 35655555543
No 40
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=97.14 E-value=0.0012 Score=41.86 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=37.8
Q ss_pred CceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeecc-------------ChhhHHHHHHHHHhC
Q 035377 1 MKLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGV-------------SEEDWNLVKDMSERH 54 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~-------------~~~~~~~~~~l~~~~ 54 (66)
|+.+|.|||-....-...+++++++|++.|++.+.+.-- ....+.++.+.+++.
T Consensus 18 ~~~~DlH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~~~~~~~~~d~~~g~~~~~~~a~~~ 84 (343)
T 3e38_A 18 TLKCDFHMHSVFSDGLVWPTVRVDEAYRDGLDAISLTEHIEYRPHKQDVVSDHNRSFDLCREQAEKL 84 (343)
T ss_dssp EEEEECCBCCTTTTCSBCHHHHHHHHHHTTCSEECCEEESSCCTTTTTBCCCTTHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHcCCCEEEECCCCcccccccccchhHHHHHHHHHHHHHhC
Confidence 457999999865544557999999999999997654322 124455666666654
No 41
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=97.04 E-value=0.0021 Score=40.68 Aligned_cols=54 Identities=15% Similarity=0.193 Sum_probs=38.5
Q ss_pred ceEeeccCCCCC--cCCCCHHHHHHHHHhcCCcEEEeec------cChhhHHHHHHHHHhCC
Q 035377 2 KLFDAHCHLQDP--RIFHKAPQLIATTVNSGVLHFAVNG------VSEEDWNLVKDMSERHP 55 (66)
Q Consensus 2 ~~iDsH~Hl~~~--~~~~~~~~~~~~~~~~gv~~~~~~~------~~~~~~~~~~~l~~~~~ 55 (66)
.+||+|+|+... ...+++....+.+...|+..++... ...+.++...+.+++.+
T Consensus 54 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (428)
T 3mpg_A 54 GLVDVHVHLREPGGEHKETIETGTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKA 115 (428)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHC
T ss_pred CEEEEeeccCCCCCCchhHHHHHHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccC
Confidence 389999999753 2346788889999999999887643 23455666666666544
No 42
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=96.97 E-value=0.0054 Score=37.41 Aligned_cols=34 Identities=18% Similarity=0.386 Sum_probs=25.6
Q ss_pred eEeeccCCCC--CcCCCCHHH---HHHHHHhcCCcEEEe
Q 035377 3 LFDAHCHLQD--PRIFHKAPQ---LIATTVNSGVLHFAV 36 (66)
Q Consensus 3 ~iDsH~Hl~~--~~~~~~~~~---~~~~~~~~gv~~~~~ 36 (66)
+||.|||+.. +.-..+.++ ++++|.+.|++.+++
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~ 39 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIA 39 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 5899999964 222335664 999999999998865
No 43
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=96.89 E-value=0.002 Score=41.56 Aligned_cols=36 Identities=17% Similarity=0.064 Sum_probs=28.0
Q ss_pred eEeeccCCCCCcC----CCCHHHHHHHHHhcCCcEEEeec
Q 035377 3 LFDAHCHLQDPRI----FHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 3 ~iDsH~Hl~~~~~----~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
+||+|+|+....+ .+++....+++...||..++..+
T Consensus 80 lID~H~H~~~~~~~~~~~e~~~~~~~~~l~~GvTtv~d~~ 119 (501)
T 2vm8_A 80 GIDVHTRFQMPDQGMTSADDFFQGTKAALAGGTTMIIDHV 119 (501)
T ss_dssp EEEEEECTTCEETTEECSSCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEeeecccccccCCCcHHHHHHHHHHHHhCCcEEEEeCC
Confidence 8999999975432 35777778889999999877643
No 44
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=96.87 E-value=0.0017 Score=38.99 Aligned_cols=35 Identities=17% Similarity=0.127 Sum_probs=28.6
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEee
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVN 37 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~ 37 (66)
++|.|||.....-...+++++++|.+.|++.+.+.
T Consensus 21 ~~DlH~Ht~~SDg~~t~ee~v~~A~~~Gl~~i~iT 55 (255)
T 2anu_A 21 LCDFHVHTNMSDGHLPLGEVVDLFGKHGVDVVSIT 55 (255)
T ss_dssp EEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEeecCCCcCCCCCHHHHHHHHHHCCCCEEEEc
Confidence 79999998755445579999999999999987543
No 45
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=96.76 E-value=0.0063 Score=38.03 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=37.6
Q ss_pred ceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeec-cChhhHHHHHHHHHhC
Q 035377 2 KLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNG-VSEEDWNLVKDMSERH 54 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~-~~~~~~~~~~~l~~~~ 54 (66)
+.+|.|||-....-...+++++++|++.|++.+.++- .+...+.++.+.+++.
T Consensus 13 ~~~DLH~Hs~~SDG~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~ 66 (301)
T 3o0f_A 13 QGWDIHCHTVFSDGTETPRTLVEQARKLGLHGVAIADHDTTAGWDEATEASEEI 66 (301)
T ss_dssp SSEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHH
T ss_pred ceEEeeECCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCccccHHHHHHHHHhc
Confidence 3699999987554445799999999999999765422 1344466666666654
No 46
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=96.73 E-value=0.012 Score=36.29 Aligned_cols=34 Identities=9% Similarity=0.142 Sum_probs=27.1
Q ss_pred eEeeccCCCCCcC-C-CCHHHHHHHHHhcCCcEEEe
Q 035377 3 LFDAHCHLQDPRI-F-HKAPQLIATTVNSGVLHFAV 36 (66)
Q Consensus 3 ~iDsH~Hl~~~~~-~-~~~~~~~~~~~~~gv~~~~~ 36 (66)
++|.|+|.....- . ..+++++++|.+.|++.+.+
T Consensus 2 ~~D~H~Ht~~s~~~~~~~~~e~~~~A~~~G~~~i~~ 37 (283)
T 3dcp_A 2 KRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSI 37 (283)
T ss_dssp CEEEEECCTTCTTSCCCCHHHHHHHHHHTTCCEEEE
T ss_pred CeEEeeCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
Confidence 6899999865432 2 46899999999999997754
No 47
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=96.68 E-value=0.0059 Score=38.79 Aligned_cols=53 Identities=15% Similarity=0.251 Sum_probs=38.5
Q ss_pred ceEeeccCCCCC--cCCCCHHHHHHHHHhcCCcEEEeecc------ChhhHHHHHHHHHhC
Q 035377 2 KLFDAHCHLQDP--RIFHKAPQLIATTVNSGVLHFAVNGV------SEEDWNLVKDMSERH 54 (66)
Q Consensus 2 ~~iDsH~Hl~~~--~~~~~~~~~~~~~~~~gv~~~~~~~~------~~~~~~~~~~l~~~~ 54 (66)
.+||+|+|+... ...++.....+.+...|+..++..+. ..+.++...+.+++.
T Consensus 53 G~iD~H~H~~~~g~~~~~~~~~~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (424)
T 3gri_A 53 GFVDVHVHLREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDN 113 (424)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHH
T ss_pred CeEEeeecCCCCCCCCHHHHHHHHHHHHhCCEEEEeECcCCCCCCChHHHHHHHHHHhccC
Confidence 389999999753 23467888888999999998877653 345666666666654
No 48
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=96.66 E-value=0.0076 Score=40.32 Aligned_cols=36 Identities=17% Similarity=0.015 Sum_probs=29.1
Q ss_pred ceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEee
Q 035377 2 KLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVN 37 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~ 37 (66)
+++|.|||.....-..++++++++|.+.|++.+.+.
T Consensus 337 ~~~DlH~HT~~SDG~~t~ee~v~~A~~~G~~~iaiT 372 (575)
T 3b0x_A 337 VKGDLQVHSTYSDGQNTLEELWEAAKTMGYRYLAVT 372 (575)
T ss_dssp CCEEEEECCTTTTCSCCHHHHHHHHHHTTCSEEEEE
T ss_pred cCeeEeecCCccCCCCCHHHHHHHHHHCCCCEEEEc
Confidence 369999998755434589999999999999987653
No 49
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=96.57 E-value=0.0028 Score=37.92 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=25.5
Q ss_pred ceEeeccCCCCC--cCCCCHH---HHHHHHHhcCCcEEEe
Q 035377 2 KLFDAHCHLQDP--RIFHKAP---QLIATTVNSGVLHFAV 36 (66)
Q Consensus 2 ~~iDsH~Hl~~~--~~~~~~~---~~~~~~~~~gv~~~~~ 36 (66)
.++|.|||.... .-..+.+ +++++|.+.|++.+.+
T Consensus 4 ~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~ 43 (247)
T 2wje_A 4 GMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVS 43 (247)
T ss_dssp CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEEC
T ss_pred CCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 479999998432 2233444 7999999999988754
No 50
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=96.53 E-value=0.0067 Score=38.30 Aligned_cols=52 Identities=13% Similarity=0.142 Sum_probs=34.8
Q ss_pred eEeeccCCCCCc-C--CCCHHHHHHHHHhcCCcEEEeec-c-C-----hhhHHHHHHHHHhC
Q 035377 3 LFDAHCHLQDPR-I--FHKAPQLIATTVNSGVLHFAVNG-V-S-----EEDWNLVKDMSERH 54 (66)
Q Consensus 3 ~iDsH~Hl~~~~-~--~~~~~~~~~~~~~~gv~~~~~~~-~-~-----~~~~~~~~~l~~~~ 54 (66)
+||+|+|+.... + .+++....+.+...||..++..+ . . .+.++..++.+++.
T Consensus 56 lID~H~H~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (458)
T 1gkr_A 56 VVDEHVHIIDMDLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRL 117 (458)
T ss_dssp EEEEEEECCCGGGTTTSCCHHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHC
T ss_pred EEEeeecccCCCCCCchhHHHHHHHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhC
Confidence 899999997533 2 34677777888889999888765 1 2 33444555555543
No 51
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=96.29 E-value=0.0075 Score=38.14 Aligned_cols=37 Identities=14% Similarity=0.132 Sum_probs=27.3
Q ss_pred eEeeccCCCCC----cCCCCHHHHHHHHHhcCCcEEEeecc
Q 035377 3 LFDAHCHLQDP----RIFHKAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 3 ~iDsH~Hl~~~----~~~~~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
+||+|+|+... ...++.....+.+...|+..++..+.
T Consensus 54 lID~H~H~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~ 94 (458)
T 1gkp_A 54 FIDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMCC 94 (458)
T ss_dssp EEEEEECSSCEETTEECSCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred EEecccCCCcCCCCCcCHhHHHHHHHHHHhCCccEEEeCCC
Confidence 89999999753 13456766667778899998877653
No 52
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=96.28 E-value=0.0066 Score=39.67 Aligned_cols=36 Identities=19% Similarity=0.080 Sum_probs=27.0
Q ss_pred eEeeccCCCCCc----CCCCHHHHHHHHHhcCCcEEEeec
Q 035377 3 LFDAHCHLQDPR----IFHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 3 ~iDsH~Hl~~~~----~~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
+||+|+|+.... ..+++....+.+...|+..++..+
T Consensus 62 lID~H~H~~~~~~~~~~~e~~~~~~~~a~~~G~Ttv~d~~ 101 (521)
T 2ftw_A 62 GIDTHTHFQLPFMGTVSVDDFDIGTQAAVAGGTTFIIDFV 101 (521)
T ss_dssp EEEEEECTTCEETTEECSSCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEeeecccCcCCCCccCHHHHHHHHHHHHhCCcceecCcC
Confidence 899999997532 135677777888889998887654
No 53
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=96.22 E-value=0.0043 Score=39.21 Aligned_cols=40 Identities=5% Similarity=-0.036 Sum_probs=21.7
Q ss_pred HHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC-CeEeeeeec
Q 035377 22 LIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP-SVIPCFGVH 64 (66)
Q Consensus 22 ~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~-~i~~~~GiH 64 (66)
.+.++.+.|+..++..+...+. +.+.+++.+ ..+.+.+++
T Consensus 115 ~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~g~r~~~~~~~~ 155 (447)
T 4f0r_A 115 AMGEMIRGGTTTINDMYFYNAA---VARAGLASGMRTFVGCSIL 155 (447)
T ss_dssp HHHHHHHTTEEEEEECBSCHHH---HHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHhCCcEEEEEcccCHHH---HHHHHHHcCCeEEEEchhc
Confidence 4455677899888766554433 333333332 345555554
No 54
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=96.14 E-value=0.0043 Score=41.30 Aligned_cols=56 Identities=16% Similarity=0.208 Sum_probs=35.3
Q ss_pred CceEeeccCCCCCcC-----CCCHHHH--------HHHHHhcCCcE-EEee----cc-ChhhHHHHHHHHHhCCC
Q 035377 1 MKLFDAHCHLQDPRI-----FHKAPQL--------IATTVNSGVLH-FAVN----GV-SEEDWNLVKDMSERHPS 56 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~-----~~~~~~~--------~~~~~~~gv~~-~~~~----~~-~~~~~~~~~~l~~~~~~ 56 (66)
|++||-||||+..++ ..++.++ .+.++.+||.- .+.+ || +..+.++-..+++..|.
T Consensus 35 ~PIiDyH~Hl~p~~iaen~~f~~i~elwl~gdHYkwr~mRa~Gv~e~~~~i~~~~gtg~~~~~ekf~~~a~~~~~ 109 (497)
T 2q01_A 35 LPIISPHGHTDPSWFATNAPFQDATDLLLAPDHYLFRMLYSQGVSLDALKVRSKAGVPDTDPREAWRVFASHFYL 109 (497)
T ss_dssp SCEEECSCCCCTHHHHHCCCCCCHHHHTTSSCHHHHHHHHTTTCCSTTTTCCBTTBSCSSCHHHHHHHHHHTGGG
T ss_pred CCeecCccCCCHHHHhhcCCCCCHHHHhccCcHHHHHHHHHcCCChhhhcccccccCCCCCHHHHHHHHHHHhHH
Confidence 689999999986432 2344444 36778899953 3222 12 44566777777776653
No 55
>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8
Probab=96.10 E-value=0.0039 Score=41.14 Aligned_cols=55 Identities=18% Similarity=0.267 Sum_probs=35.9
Q ss_pred CceEeeccCCCCCcC-----CCCHHH--------HHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 1 MKLFDAHCHLQDPRI-----FHKAPQ--------LIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~-----~~~~~~--------~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
|++||-|||++..+. .+++-+ ..+.++.+||..=.+.| +..+.++-..+++.+|.
T Consensus 36 ~PIiD~HcHl~p~~i~~~~~F~ni~e~wl~gDHYkwr~mRa~Gv~e~~itg-~~~~~ekf~~~a~~~~~ 103 (463)
T 1j5s_A 36 LPIVDPHNHLDAKDIVENKPWNDIWEVEGATDHYVWELMRRCGVSEEYITG-SRSNKEKWLALAKVFPR 103 (463)
T ss_dssp SCEEESCCCCCHHHHHHTCCCSCHHHHHTTTCHHHHHHHHHTTCCGGGTTS-SSCHHHHHHHHHHHGGG
T ss_pred CCeecCccCCCHHHhccccCcccHHHHhccCchHHHHHHhhcCCChhhhcC-CCCHHHHHHHHHhhhHH
Confidence 679999999985331 234443 34677899985433345 55667777777777654
No 56
>3iac_A Glucuronate isomerase; IDP02065, structural genom center for structural genomics of infectious diseases, CSGI; 2.22A {Salmonella typhimurium} SCOP: c.1.9.0
Probab=96.10 E-value=0.0043 Score=41.09 Aligned_cols=56 Identities=23% Similarity=0.412 Sum_probs=38.7
Q ss_pred CceEeeccCCCCCc-----CCCCHHHHH--------HHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 1 MKLFDAHCHLQDPR-----IFHKAPQLI--------ATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 1 m~~iDsH~Hl~~~~-----~~~~~~~~~--------~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
|+|||-|||++..+ -.+|+.++. +.++.+||..=.++|.+..+.++-..+++..|.
T Consensus 30 lPIiDyH~Hl~P~~iaen~~F~nit~lwl~gDHYkwR~mrs~Gv~e~~itG~~a~~~ekf~~~A~t~p~ 98 (473)
T 3iac_A 30 MPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHYKWRALRSAGVDESLITGKETSDYEKYMAWANTVPK 98 (473)
T ss_dssp SCEEECSCCCCHHHHHHTCCCSCHHHHHHSSCSHHHHHHHHTTCCGGGTTCTTSCHHHHHHHHHHHGGG
T ss_pred CCEECCCCCCCHHHhccCCCCCCHHHHhccCchHHHHHHHHcCCCHHHccCCCCChHHHHHHHHHHHHH
Confidence 68999999998532 234665553 577899997422356566677777888887764
No 57
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=95.89 E-value=0.012 Score=39.44 Aligned_cols=34 Identities=12% Similarity=-0.074 Sum_probs=28.4
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEe
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAV 36 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~ 36 (66)
++|.|||.....-...+++++++|.+.|++.+.+
T Consensus 328 ~~DlH~HT~~SDG~~t~eemv~~A~~~Gl~~Iai 361 (578)
T 2w9m_A 328 RGMIHTHSTWSDGGASIREMAEATLTLGHEFLGT 361 (578)
T ss_dssp CEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEE
T ss_pred ceEEEecCCccCCCCCHHHHHHHHHHCCCeEEEE
Confidence 6899999875544568999999999999998764
No 58
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=95.86 E-value=0.0072 Score=38.74 Aligned_cols=49 Identities=12% Similarity=0.080 Sum_probs=30.2
Q ss_pred ceEeeccCCCC----C--cCCCCHHHHHHHHHhcCCcEEEee--ccChhhHHHHHHH
Q 035377 2 KLFDAHCHLQD----P--RIFHKAPQLIATTVNSGVLHFAVN--GVSEEDWNLVKDM 50 (66)
Q Consensus 2 ~~iDsH~Hl~~----~--~~~~~~~~~~~~~~~~gv~~~~~~--~~~~~~~~~~~~l 50 (66)
.+||+|+|... . ...+++....+.+...|+..++.. +...++..++++.
T Consensus 57 GfID~HvHg~~G~~~~d~~~~e~l~~~~~a~~~~GvTt~l~t~~T~~~e~l~~al~~ 113 (381)
T 3iv8_A 57 GFIDLQLNGCGGVMFNDEITAETIDTMHKANLKSGCTSFLPTLITSSDENMRQAIAA 113 (381)
T ss_dssp CEEEEEECEETTEETTTSCSHHHHHHHHHHHHHTTEEEEEEEEESCCHHHHHHHHHH
T ss_pred CeEeeeecccCCCCCCCCCCHHHHHHHHHHHHhCCccccccccCCCCHHHHHHHHHH
Confidence 38999999531 1 112345566677788999887654 3355666655443
No 59
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=95.52 E-value=0.036 Score=35.51 Aligned_cols=37 Identities=16% Similarity=0.026 Sum_probs=28.2
Q ss_pred ceEeeccCCCCC----cCCCCHHHHHHHHHhcCCcEEEeec
Q 035377 2 KLFDAHCHLQDP----RIFHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 2 ~~iDsH~Hl~~~----~~~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
.+||+|+|+..+ ...+++....+.+...|+..++..+
T Consensus 53 G~ID~H~H~~~~~~~~~~~e~~~~~~~~~~~~GvTt~~~~~ 93 (461)
T 3sfw_A 53 GGIDPHTHLDMPFGGTVTSDNFFTGTKAAAFGGTTSIVDFC 93 (461)
T ss_dssp CEEEEEECTTCEETTEECSCCHHHHHHHHHHTTEEEEEEEE
T ss_pred eeEEeEeccCcCCCCcccHhHHHHHHHHHHhCCEEEEEccC
Confidence 389999999742 2346777778888899999887654
No 60
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=95.49 E-value=0.018 Score=35.90 Aligned_cols=47 Identities=11% Similarity=0.181 Sum_probs=30.6
Q ss_pred eEeeccCCCCCcCC------CC-------HHHHHHHHHhcCCcEEEeeccChhhHHHHHH
Q 035377 3 LFDAHCHLQDPRIF------HK-------APQLIATTVNSGVLHFAVNGVSEEDWNLVKD 49 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~------~~-------~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ 49 (66)
+||+|+|+....+. .+ ....++++...||..+...+.......+.++
T Consensus 61 lID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~l~~~~~ 120 (423)
T 3feq_A 61 FIDCHVHVLASNANLGVNATQPNILAAIRSLPILDAMLSRGFTSVRDAGGADWSLMQAVE 120 (423)
T ss_dssp EEEEEECTTCCSSCHHHHHHSCHHHHHHTHHHHHHHHHHTTEEEEEECSSCCHHHHHHHH
T ss_pred eeeeEeeecccCCChhhhhcCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCchHHHHHHHH
Confidence 89999999764331 11 1244566678999998888766555544443
No 61
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=95.38 E-value=0.026 Score=37.08 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=25.8
Q ss_pred eEeeccCCCCCc----CCCCHHHHHHHHHhcCCcEEEeec
Q 035377 3 LFDAHCHLQDPR----IFHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 3 ~iDsH~Hl~~~~----~~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
+||+|+|+.... ..+++....+.+...|+..++..+
T Consensus 85 ~ID~H~Hl~~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~ 124 (541)
T 2vr2_A 85 GIDTHTHMQFPFMGSRSIDDFHQGTKAALSGGTTMIIDFA 124 (541)
T ss_dssp EEEEEECTTCBCSSSBCSCCTTHHHHHHHTTTEEEEEEEE
T ss_pred EEEecccCCCCCCCCcCHHHHHHHHHHHHhCCeeeecccc
Confidence 899999997532 124566667778889998877654
No 62
>2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A*
Probab=95.06 E-value=0.0095 Score=39.14 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=22.7
Q ss_pred CceEeeccCCCCCcCC----CCHHHH-----HH-H-HHhcCCc
Q 035377 1 MKLFDAHCHLQDPRIF----HKAPQL-----IA-T-TVNSGVL 32 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~----~~~~~~-----~~-~-~~~~gv~ 32 (66)
|++||-||||+..++. .++.++ .- | ++.+||.
T Consensus 22 ~PIiDyH~HL~P~~iae~~f~ni~elwgdHYkw~r~mRa~Gv~ 64 (437)
T 2qee_A 22 QPVTDMHTHLFSPNFGEILLWDIDELLTYHYLVAEVMRWTDVS 64 (437)
T ss_dssp SCEEECSCSCCCGGGCTTSBCSHHHHHTSHHHHHHHHTTCCSC
T ss_pred CCeeccccCCCHHHHHhcccCCHHhccccHHHHHHHHHHcCCC
Confidence 6899999999975544 456666 22 4 7778874
No 63
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=94.95 E-value=0.048 Score=34.20 Aligned_cols=36 Identities=17% Similarity=0.162 Sum_probs=26.9
Q ss_pred eEeeccCCCCCc-CC-CCHHHHHHHHHhcCCcEEEeec
Q 035377 3 LFDAHCHLQDPR-IF-HKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 3 ~iDsH~Hl~~~~-~~-~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
+||+|+|+.... +. .+++....++...|+..++..+
T Consensus 57 lID~H~H~~~~~~~~~~~l~~~~~~~l~~GvTtv~d~~ 94 (376)
T 1o12_A 57 FVDPHIHGVVGADTMNCDFSEMEEFLYSQGVTTFLATT 94 (376)
T ss_dssp EEEEEECEETTEETTTTCHHHHHHHHHTTTEEEEEEEC
T ss_pred eEEEeecCCCCCCCChhhHHHHHHHHHhCCcEEEEecc
Confidence 899999985322 21 2477888888999999887765
No 64
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=94.85 E-value=0.082 Score=37.48 Aligned_cols=60 Identities=12% Similarity=0.137 Sum_probs=38.1
Q ss_pred eEeeccCCCCC--cCCCCHHHHHHHHHhcCCcEEEeec-cChhhHHHHHHHHHhCCCeEeeeee
Q 035377 3 LFDAHCHLQDP--RIFHKAPQLIATTVNSGVLHFAVNG-VSEEDWNLVKDMSERHPSVIPCFGV 63 (66)
Q Consensus 3 ~iDsH~Hl~~~--~~~~~~~~~~~~~~~~gv~~~~~~~-~~~~~~~~~~~l~~~~~~i~~~~Gi 63 (66)
++|.|||-... .-...+++++++|++.|+..+.++= .+.....+..+.+++. ++.+-.|+
T Consensus 6 ~vdLH~HT~~S~lDG~~~~~elv~~A~~~Gl~alAITDH~~~~G~~~~~~~~~~~-gIk~I~G~ 68 (910)
T 2hnh_A 6 FVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA-GIKPIVGA 68 (910)
T ss_dssp CCCCCBCCGGGSSSCCSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHH-TCEEEEEE
T ss_pred eeeecccccCchhcccCCHHHHHHHHHHCCCCEEEEEeCCcchhHHHHHHHHHHC-CCeEEEEE
Confidence 79999997654 2345799999999999998764431 1223334444445543 45555553
No 65
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=94.64 E-value=0.1 Score=37.53 Aligned_cols=61 Identities=16% Similarity=0.207 Sum_probs=39.7
Q ss_pred CceEeeccCCCCC--cCCCCHHHHHHHHHhcCCcEEEeec-cChhhHHHHHHHHHhCCCeEeeee
Q 035377 1 MKLFDAHCHLQDP--RIFHKAPQLIATTVNSGVLHFAVNG-VSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 1 m~~iDsH~Hl~~~--~~~~~~~~~~~~~~~~gv~~~~~~~-~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
|+++|.|||-... .-...+++++++|++.|+..+.++= .+...+.+..+.+++. ++.+-.|
T Consensus 114 ~~~vdLH~HT~~S~lDG~~~~~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~-gIk~I~G 177 (1041)
T 3f2b_A 114 EKRVELHLHTPMSQMDAVTSVTKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKH-GMKVIYG 177 (1041)
T ss_dssp SCCCBCCBCCTTSTTTCCSCHHHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHH-TCCEEEE
T ss_pred cceEEcccCCcCccccccCCHHHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHC-CCEEEEE
Confidence 5789999998654 2234799999999999998764321 1344455555556554 3444333
No 66
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=94.61 E-value=0.15 Score=32.98 Aligned_cols=37 Identities=16% Similarity=0.279 Sum_probs=24.9
Q ss_pred ceEeeccCCCCCc--CCCCHHHHHHHHHhcCCcEEEeec
Q 035377 2 KLFDAHCHLQDPR--IFHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 2 ~~iDsH~Hl~~~~--~~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
.+||+|+|+..+. ..+++....+.+...|+..++...
T Consensus 74 G~iD~H~H~~~~g~~~~~~~~~~~~~~~~~G~Tt~~~~~ 112 (473)
T 3e74_A 74 GMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMP 112 (473)
T ss_dssp CEEEEEECC---------CHHHHHHHHHHTTEEEEEECC
T ss_pred CEEEEecccCCCCCCcHHHHHHHHHHHHhCCEEEEEcCc
Confidence 3899999996532 235677778888899999887665
No 67
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=94.59 E-value=0.19 Score=32.02 Aligned_cols=37 Identities=19% Similarity=0.262 Sum_probs=27.0
Q ss_pred ceEeeccCCCCCcC--CCCHHHHHHHHHhcCCcEEEeec
Q 035377 2 KLFDAHCHLQDPRI--FHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~--~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
.+||+|+|+....+ .++.....+.+...||..++...
T Consensus 61 GlID~H~H~~~~~~~~~e~~~~~~~~~~~~GvTt~~~~~ 99 (452)
T 2gwn_A 61 GCIDDQVHFREPGLTHKATIASESRAAVAGGVTSFMDMP 99 (452)
T ss_dssp CEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECS
T ss_pred CEEeeccccCCCCCCcHHHHHHHHHHHHhCCeEEEEcCC
Confidence 38999999975332 34666667777889999877654
No 68
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=94.57 E-value=0.047 Score=34.31 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=30.0
Q ss_pred eEeeccCCCCCcCC------CCHH-------HHHHHHHhcCCcEEEeeccChhhHHHHHH
Q 035377 3 LFDAHCHLQDPRIF------HKAP-------QLIATTVNSGVLHFAVNGVSEEDWNLVKD 49 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~------~~~~-------~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ 49 (66)
+||+|+|+....+. .+.+ ..++++...|+..+...+......++.++
T Consensus 61 liD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~l~~~i~ 120 (426)
T 2r8c_A 61 LIDLHVHVVAIEFNLPRVATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAGYPFKQAVE 120 (426)
T ss_dssp EEEEEECTTCCSSCHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCCHHHHHHHH
T ss_pred eEeeeeccccccCCchhhccCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCchHHHHHHHH
Confidence 89999999764321 1111 33456678999999888866554444433
No 69
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=94.52 E-value=0.041 Score=34.04 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=25.0
Q ss_pred eEeeccCCCCCcCC-------CCHHH-------HHHHHHhcCCcEEEeeccC
Q 035377 3 LFDAHCHLQDPRIF-------HKAPQ-------LIATTVNSGVLHFAVNGVS 40 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~-------~~~~~-------~~~~~~~~gv~~~~~~~~~ 40 (66)
+||+|+|+...... .+.+. .++++...|+..+...|..
T Consensus 60 lID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~ 111 (403)
T 3gnh_A 60 LIDMHVHLDSLAEVGGYNSLEYSDRFWSVVQTANAKKTLEAGFTTVRNVGAA 111 (403)
T ss_dssp EEEEEECTTCCTTCCSGGGGGSCHHHHHHHHHHHHHHHHHTTEEEEEECCCS
T ss_pred eEeeeEccccCcccchhhhhcCCHHHHHHHHHHHHHHHHhCCeeEEEeCCCC
Confidence 89999999753321 12222 2366778999988887754
No 70
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=94.16 E-value=0.18 Score=32.23 Aligned_cols=11 Identities=36% Similarity=0.392 Sum_probs=9.1
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.+||+|+|+..
T Consensus 74 GlID~H~Hl~~ 84 (472)
T 4dzh_A 74 GLVNAHTHNPM 84 (472)
T ss_dssp CEEEEEECGGG
T ss_pred CccccccChhh
Confidence 38999999964
No 71
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=94.07 E-value=0.083 Score=33.62 Aligned_cols=32 Identities=13% Similarity=0.020 Sum_probs=17.5
Q ss_pred HHHHHhcCCcEEEeeccC-hh--hHHHHHHHHHhC
Q 035377 23 IATTVNSGVLHFAVNGVS-EE--DWNLVKDMSERH 54 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~~-~~--~~~~~~~l~~~~ 54 (66)
+.++.+.|+..+...+.. +. ..+.+++..++.
T Consensus 139 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~ 173 (479)
T 3h4u_A 139 MAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRI 173 (479)
T ss_dssp HHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHH
T ss_pred HHHHHhCCeEEEEECccccCCcchHHHHHHHHHHc
Confidence 345667899888766432 11 234455555443
No 72
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=93.81 E-value=0.13 Score=34.42 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=23.2
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeecc
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
+||+|+|+..+. ...++...||..++..|+
T Consensus 132 lID~HvHl~~p~-------~~~~al~~GvTTv~d~g~ 161 (569)
T 1e9y_B 132 GIDTHIHFISPQ-------QIPTAFASGVTTMIGGGT 161 (569)
T ss_dssp EEEEEEETTCTT-------HHHHHHHTTEEEEEEECC
T ss_pred EEEEeecCCCcH-------HHHHHHhCCeeEEEcCCc
Confidence 899999996432 257788899998888764
No 73
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=93.64 E-value=0.063 Score=33.39 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=24.5
Q ss_pred ceEeeccCCCCC----cC-CCCHHHHHHHHHhcCCcEEEeec
Q 035377 2 KLFDAHCHLQDP----RI-FHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 2 ~~iDsH~Hl~~~----~~-~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
.+||+|+|+... .. .+++.....++...||..++..+
T Consensus 58 GlID~H~H~~~~~~~~~~~~e~~~~~~~~~l~~GvTtv~d~~ 99 (396)
T 2vhl_A 58 GMIDIHIHGGYGADTMDASFSTLDIMSSRLPEEGTTSFLATT 99 (396)
T ss_dssp CEEEEEECEETTEEGGGCSHHHHHHHHHHGGGGTEEEEEEEC
T ss_pred CEEEEeecCCcCccccCCCHHHHHHHHHHHHcCCeeEEEecc
Confidence 389999999642 11 11233346677889999888765
No 74
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=93.61 E-value=0.051 Score=32.00 Aligned_cols=25 Identities=4% Similarity=0.009 Sum_probs=17.9
Q ss_pred CceEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEE
Q 035377 1 MKLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFA 35 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~ 35 (66)
|+++|.|+| +.+.+++|.+. ++.+.
T Consensus 7 M~~~D~hvh---------~~e~~~~A~~~-~~~i~ 31 (212)
T 1v77_A 7 VKFIEMDIR---------DKEAYELAKEW-FDEVV 31 (212)
T ss_dssp CCCEEEEEC---------SHHHHHHHHHH-CSEEE
T ss_pred eEEEEeCcC---------HHHHHHHHHHH-hcEEE
Confidence 558999999 46667777776 66543
No 75
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=93.59 E-value=0.41 Score=35.13 Aligned_cols=62 Identities=16% Similarity=-0.002 Sum_probs=40.4
Q ss_pred CceEeeccCCCCCc--CCCCHHHHHHHHHh--cCCcEEEeec-cChhhHHHHHHHHHhCCCeEeeeee
Q 035377 1 MKLFDAHCHLQDPR--IFHKAPQLIATTVN--SGVLHFAVNG-VSEEDWNLVKDMSERHPSVIPCFGV 63 (66)
Q Consensus 1 m~~iDsH~Hl~~~~--~~~~~~~~~~~~~~--~gv~~~~~~~-~~~~~~~~~~~l~~~~~~i~~~~Gi 63 (66)
|+++|.|||-...- -...+++++++|++ .|+..+-++= .+.....+..+.+++ .++.+-.|+
T Consensus 5 ~~fvdLH~HT~~SlLDG~~~~~elv~~A~~~~~G~~alAITDH~~~~G~~~f~~~a~~-~gIk~I~G~ 71 (1220)
T 2hpi_A 5 LKFAHLHQHTQFSLLDGAAKLQDLLKWVKETTPEDPALAMTDHGNLFGAVEFYKKATA-MGVKPIIGY 71 (1220)
T ss_dssp CCCCCCSBCCTTSTTTCCCCHHHHHHHHHHHCCSSCEEEEEEETCCTTHHHHHHHHHT-TTCEEEEEE
T ss_pred CcEeEcccccCCCcccccCCHHHHHHHHHhccCCCCEEEEEecCcchhHHHHHHHHHH-cCCeEEEEE
Confidence 56899999987542 23579999999999 9998764431 123333444555555 356666554
No 76
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=93.58 E-value=0.23 Score=32.36 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=27.2
Q ss_pred eEeeccCCCCC----cCCCCHHHHHHHHHhcCCcEEEeec
Q 035377 3 LFDAHCHLQDP----RIFHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 3 ~iDsH~Hl~~~----~~~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
+||+|+|+..+ ...+++....+.+...|+..++...
T Consensus 52 ~ID~H~H~~~~~~~~~~~e~~~~~~~aa~~~GvTtv~~~~ 91 (490)
T 3dc8_A 52 GIDPHTHLEMPFMGTYSSDDFESGTRAALAGGTTMVVDFA 91 (490)
T ss_dssp EEEEEECTTCEETTEECSCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEeeccccCCCCCCCCCHHHHHHHHHHHHHcCEEeecccC
Confidence 89999999753 2345777778888889998876543
No 77
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=93.49 E-value=0.36 Score=30.03 Aligned_cols=46 Identities=15% Similarity=-0.066 Sum_probs=27.3
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeec-c-----ChhhHHHHHHHHH
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNG-V-----SEEDWNLVKDMSE 52 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~-~-----~~~~~~~~~~l~~ 52 (66)
+||.|+|+.. .. ...+ ...|...|+..++... + +.+.+....+.++
T Consensus 12 ~ID~HvH~~~-g~--~~~e-~~aa~~gGvTtvv~mpnt~p~~~~~~~~~~~~~~~~ 63 (347)
T 2z26_A 12 PDDWHLHLRD-GD--MLKT-VVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRIL 63 (347)
T ss_dssp CCEEEECCCS-HH--HHHH-HHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHH
T ss_pred cceeeecCCC-CC--chhh-HHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHh
Confidence 7999999975 21 1122 2667778999877654 2 2344554444444
No 78
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=93.48 E-value=0.29 Score=32.47 Aligned_cols=38 Identities=18% Similarity=0.308 Sum_probs=27.8
Q ss_pred ceEeeccCCCCCc-----CCCCHHHHHHHHHhcCCcEEEeecc
Q 035377 2 KLFDAHCHLQDPR-----IFHKAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 2 ~~iDsH~Hl~~~~-----~~~~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
.+||+|+|+.... ..+++....+.+...|+..++..+.
T Consensus 56 GlID~H~H~~~~~~~~~~~~e~~~~~~~~~l~~GvTtv~d~~~ 98 (559)
T 2fty_A 56 GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFST 98 (559)
T ss_dssp CEEECCBCCCCTTCTTSCCSCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CEEeeccCcCccccccCCCHHHHHHHHHHHHhCcEEEEEECcC
Confidence 3899999997532 2346666677788899998877654
No 79
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=93.02 E-value=0.25 Score=31.08 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=18.7
Q ss_pred HHHHhcCCcEEEeecc-ChhhHHHHHHHHHhC
Q 035377 24 ATTVNSGVLHFAVNGV-SEEDWNLVKDMSERH 54 (66)
Q Consensus 24 ~~~~~~gv~~~~~~~~-~~~~~~~~~~l~~~~ 54 (66)
+++...||..+...+. .++....+++..++.
T Consensus 120 ~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~ 151 (439)
T 2i9u_A 120 KDLIKNGTTRVALFATLHKDSTIELFNMLIKS 151 (439)
T ss_dssp HHHHHTTEEEEEEECCSCHHHHHHHHHHHHHH
T ss_pred HHHHhcCceEEEEccccccchHHHHHHHHHHc
Confidence 5677889998776553 444444555544443
No 80
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=92.75 E-value=0.22 Score=31.95 Aligned_cols=32 Identities=9% Similarity=0.036 Sum_probs=21.0
Q ss_pred HHHHHhcCCcEEEeecc-ChhhHHHHHHHHHhC
Q 035377 23 IATTVNSGVLHFAVNGV-SEEDWNLVKDMSERH 54 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~-~~~~~~~~~~l~~~~ 54 (66)
+.++...|+..+...+. .++..+.+.+.+++.
T Consensus 124 ~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~ 156 (475)
T 2ood_A 124 LDALLAAGTTTCQAFTSSSPVATEELFEEASRR 156 (475)
T ss_dssp HHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHhcCceEEEEecccCchhHHHHHHHHHHc
Confidence 56778899998877553 455556656655554
No 81
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=92.73 E-value=0.13 Score=32.66 Aligned_cols=39 Identities=18% Similarity=0.060 Sum_probs=21.1
Q ss_pred HHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC-CeEeeeeec
Q 035377 23 IATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP-SVIPCFGVH 64 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~-~i~~~~GiH 64 (66)
+.++.+.|+..+.......+ .+.+.+++.+ ..+.+.+++
T Consensus 138 ~~~~l~~GvTtv~d~~~~~~---~~~~~~~~~g~r~~~~~~~~ 177 (468)
T 3lnp_A 138 IAEMIQSGTTTFADMYFYPQ---QSGEAALAAGIRAVCFAPVL 177 (468)
T ss_dssp HHHHHHTTEEEEEECCSCHH---HHHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHhCCcEEEEEcccCHH---HHHHHHHHcCCeEEEecccc
Confidence 44567789887776544443 3334444433 344555554
No 82
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=92.46 E-value=0.14 Score=34.54 Aligned_cols=27 Identities=19% Similarity=0.395 Sum_probs=20.3
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEe
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAV 36 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~ 36 (66)
+||+|+|+..+.+ .+.|...|+..++.
T Consensus 133 ~ID~HvH~~~Pg~-------~~aAl~gGvTTvv~ 159 (570)
T 4ac7_C 133 GIDTHVHFINPDQ-------VDVALANGITTLFG 159 (570)
T ss_dssp EEEEEEECCCTTH-------HHHHHHTTEEEEEE
T ss_pred EEecccccCCcch-------HHHHHhcCCeEEEe
Confidence 8999999965332 25678889988874
No 83
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=92.46 E-value=0.14 Score=34.54 Aligned_cols=27 Identities=19% Similarity=0.395 Sum_probs=20.3
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEe
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAV 36 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~ 36 (66)
+||+|+|+..+.+ .+.|...|+..++.
T Consensus 133 ~ID~HvH~~~Pg~-------~~aAl~gGvTTvv~ 159 (570)
T 4ubp_C 133 GIDTHVHFINPDQ-------VDVALANGITTLFG 159 (570)
T ss_dssp EEEEEEECCCTTH-------HHHHHHTTEEEEEE
T ss_pred EEEcccCCCCcch-------HHHHHhcCCeEEEe
Confidence 8999999965332 25678889988874
No 84
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=92.46 E-value=0.38 Score=29.98 Aligned_cols=38 Identities=24% Similarity=0.205 Sum_probs=24.7
Q ss_pred ceEeeccCCCCCc-------CCCCHHH-------HHHHHHhcCCcEEEeecc
Q 035377 2 KLFDAHCHLQDPR-------IFHKAPQ-------LIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 2 ~~iDsH~Hl~~~~-------~~~~~~~-------~~~~~~~~gv~~~~~~~~ 39 (66)
.+||+|+|+.... +....++ ...++...||..+...++
T Consensus 64 GlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~ 115 (418)
T 2qs8_A 64 GLMDMHVHFGQEYQSKAQAPIKVEREMQAILATQHAYVTFKSGFTTVRQVGD 115 (418)
T ss_dssp CEEEEEECTTCCCCCTTTSCSCCCHHHHHHHHHHHHHHHHHTTEEEEEECCC
T ss_pred CeeeeeeccccCCCCCchhhhcCCHHHHHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 3899999996422 1123232 456778899998876654
No 85
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=92.31 E-value=0.16 Score=31.99 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=26.8
Q ss_pred ceEeeccCCCCCc----CCCCHHHHHHHHHhcCCcEEEeecc
Q 035377 2 KLFDAHCHLQDPR----IFHKAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 2 ~~iDsH~Hl~~~~----~~~~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
.+||+|+|+.... ..++.....+.+...||..++..+.
T Consensus 52 GlID~H~H~~~~~~~~~~~e~~~~~~~~~~~~GvTtv~~~~~ 93 (457)
T 1nfg_A 52 GGIDVHTHVETVSFNTQSADTFATATVAAACGGTTTIVDFCQ 93 (457)
T ss_dssp CEEEEEECCSCEETTEECSCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ceEeeccccccCcCCCCChhhHHHHHHHHHhCCcEEEEeCCC
Confidence 3899999997311 2346666677778899998776553
No 86
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=92.13 E-value=0.28 Score=31.28 Aligned_cols=64 Identities=13% Similarity=0.075 Sum_probs=41.4
Q ss_pred ceEeeccCCC--CCcCCC-------C-------HHHHHHHHHhcCCcEEEeeccC--hhhHHHHHHHHHhCC-CeEeeee
Q 035377 2 KLFDAHCHLQ--DPRIFH-------K-------APQLIATTVNSGVLHFAVNGVS--EEDWNLVKDMSERHP-SVIPCFG 62 (66)
Q Consensus 2 ~~iDsH~Hl~--~~~~~~-------~-------~~~~~~~~~~~gv~~~~~~~~~--~~~~~~~~~l~~~~~-~i~~~~G 62 (66)
.++++|-||. .+.+.. + ..+.+++.++.|+..++.+++. -++...+.+++++-. +|..+.|
T Consensus 52 G~tl~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~is~~tGv~IV~~TG 131 (360)
T 3tn4_A 52 GKTLIHEHFLFGYPGFQGDVTRGTFREDESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRVAEETGLNIICATG 131 (360)
T ss_dssp CSEESSCEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHHHHHHHCCEEEEEEC
T ss_pred CCceeccCeeecChhhhcccccchhhhhhHHHHHHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHHHHHHcCCCEEEeCc
Confidence 4688999973 222211 1 1233456788999999876531 246677777888765 5888889
Q ss_pred ecC
Q 035377 63 VHP 65 (66)
Q Consensus 63 iHP 65 (66)
++.
T Consensus 132 ~y~ 134 (360)
T 3tn4_A 132 YYY 134 (360)
T ss_dssp CCC
T ss_pred ccc
Confidence 874
No 87
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=92.09 E-value=0.23 Score=31.68 Aligned_cols=32 Identities=13% Similarity=0.070 Sum_probs=19.6
Q ss_pred HHHHhcCCcEEEeecc-Ch-----hhHHHHHHHHHhCC
Q 035377 24 ATTVNSGVLHFAVNGV-SE-----EDWNLVKDMSERHP 55 (66)
Q Consensus 24 ~~~~~~gv~~~~~~~~-~~-----~~~~~~~~l~~~~~ 55 (66)
.++...||..+...+. .+ +.++...+..++.+
T Consensus 124 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g 161 (492)
T 2paj_A 124 IELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLG 161 (492)
T ss_dssp HHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTT
T ss_pred HHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcC
Confidence 3477889998877653 32 34556666666543
No 88
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=92.02 E-value=0.097 Score=32.26 Aligned_cols=37 Identities=24% Similarity=0.431 Sum_probs=24.3
Q ss_pred ceEeeccCCCCCcCCC--CHHHHHHHHHhcCCcEEEeec
Q 035377 2 KLFDAHCHLQDPRIFH--KAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~~--~~~~~~~~~~~~gv~~~~~~~ 38 (66)
.+||+|+|+....+.+ .......++...||..++..+
T Consensus 62 GlID~H~H~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~ 100 (386)
T 2vun_A 62 GLLDTHVHVSGGDYAPRQKTMDFISSALHGGVTTMISAG 100 (386)
T ss_dssp CEEEEEECCCSTTEEGGGTEESHHHHHHTTTEEEEEECC
T ss_pred ceeeccccccCCCcChhHHHHHHHHHHHhCCceEEEecc
Confidence 3899999997422211 111256778889999887754
No 89
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=91.76 E-value=0.44 Score=28.91 Aligned_cols=56 Identities=13% Similarity=0.220 Sum_probs=34.9
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
.+|.|.... +++..++.+.++|.+.+.+-.-..+...+.++..+++ ++.+.+-++|
T Consensus 88 ~ldvHLmv~------~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~-G~k~Gvalnp 143 (246)
T 3inp_A 88 GMDVHLMVK------PVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSF-GIQAGLALNP 143 (246)
T ss_dssp CEEEEEECS------SCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTT-TSEEEEEECT
T ss_pred eEEEEEeeC------CHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHc-CCeEEEEecC
Confidence 467776643 3466777777888776554443334566667766665 5566666666
No 90
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=91.76 E-value=0.34 Score=30.79 Aligned_cols=45 Identities=20% Similarity=0.132 Sum_probs=31.3
Q ss_pred HHHHHHhcCCcEEEeeccC--------h--------hhHHHHHHHHHhCCC-eEeeeeecCC
Q 035377 22 LIATTVNSGVLHFAVNGVS--------E--------EDWNLVKDMSERHPS-VIPCFGVHPW 66 (66)
Q Consensus 22 ~~~~~~~~gv~~~~~~~~~--------~--------~~~~~~~~l~~~~~~-i~~~~GiHP~ 66 (66)
.++.+.+.||++.++..+. . ..++.+.++++++|+ +.+.+.++|+
T Consensus 95 rl~~MD~~GId~~Vl~~~~pg~~~~~d~~~a~~~~r~~Nd~l~~~~~~~P~Rf~g~a~v~~~ 156 (373)
T 4inf_A 95 RIADMDATGIDKAILALTSPGVQPLHDLDEARTLATRANDTLADACQKYPDRFIGMGTVAPQ 156 (373)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTTTCSCHHHHHHHHHHHHHHHHHHHHHSTTTEEECBCCCTT
T ss_pred HHHHHHHCCCcEEEEccCCccccccCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecCCC
Confidence 7888999999976554221 1 246678888999997 5566666663
No 91
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=91.50 E-value=0.17 Score=31.60 Aligned_cols=17 Identities=18% Similarity=0.270 Sum_probs=13.3
Q ss_pred HHHHHHHhcCCcEEEee
Q 035377 21 QLIATTVNSGVLHFAVN 37 (66)
Q Consensus 21 ~~~~~~~~~gv~~~~~~ 37 (66)
..+.++.+.||..++..
T Consensus 102 ~~~~~~~~~GvTtv~~~ 118 (396)
T 3ooq_A 102 PAIERALAGGVTSVMIV 118 (396)
T ss_dssp HHHHHHHTTTEEEEEEC
T ss_pred HHHHHHHhCCeEEEecc
Confidence 46788999999887654
No 92
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=91.21 E-value=0.34 Score=30.09 Aligned_cols=18 Identities=17% Similarity=0.139 Sum_probs=11.7
Q ss_pred HHHHhcCCcEEEeeccCh
Q 035377 24 ATTVNSGVLHFAVNGVSE 41 (66)
Q Consensus 24 ~~~~~~gv~~~~~~~~~~ 41 (66)
.++...|+..++..+...
T Consensus 101 ~~~l~~GvTtv~d~~~~~ 118 (406)
T 1p1m_A 101 MEMARHGIAGFVDMYFHE 118 (406)
T ss_dssp HHHHTTTEEEEEEEESSH
T ss_pred HHHHhcCcEEEEechhCH
Confidence 345578988877666443
No 93
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=91.18 E-value=0.55 Score=29.46 Aligned_cols=11 Identities=36% Similarity=0.661 Sum_probs=9.0
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.+||+|+|+..
T Consensus 58 G~ID~H~H~~~ 68 (456)
T 3ls9_A 58 GLINSHQHLYE 68 (456)
T ss_dssp CEEEEEECGGG
T ss_pred Ceeecccccch
Confidence 38999999953
No 94
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=91.12 E-value=0.42 Score=28.47 Aligned_cols=56 Identities=13% Similarity=0.217 Sum_probs=31.1
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
.+|.|.+... ++..++.+.++|.+.+.+-+...+...+.++..+++ ++...+-++|
T Consensus 66 ~~dvhLmv~~------p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~-G~k~gval~p 121 (228)
T 3ovp_A 66 FFDMHMMVSK------PEQWVKPMAVAGANQYTFHLEATENPGALIKDIREN-GMKVGLAIKP 121 (228)
T ss_dssp CEEEEEECSC------GGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHT-TCEEEEEECT
T ss_pred cEEEEEEeCC------HHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHc-CCCEEEEEcC
Confidence 4788877643 344566666677765544433333455555555554 4445555555
No 95
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=90.58 E-value=0.39 Score=30.43 Aligned_cols=18 Identities=28% Similarity=0.231 Sum_probs=12.9
Q ss_pred HHHHHHhcCCcEEEeecc
Q 035377 22 LIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 22 ~~~~~~~~gv~~~~~~~~ 39 (66)
...++...||..++..+.
T Consensus 120 ~~~~~l~~GvTtv~d~~~ 137 (458)
T 2p9b_A 120 NATTLLESGVTTIRTLGD 137 (458)
T ss_dssp HHHHHHHTTEEEEEESCC
T ss_pred HHHHHHHcCCcEEEeCCC
Confidence 456677889988877654
No 96
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=90.40 E-value=0.31 Score=29.76 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=22.1
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
.++.++++.++|+++++++-..+++.+...+.++++
T Consensus 105 ~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~ 140 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVPELSFEESDDLIKECERY 140 (252)
T ss_dssp HHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHc
Confidence 455666666666666666665556655555555555
No 97
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=90.28 E-value=0.13 Score=32.40 Aligned_cols=10 Identities=40% Similarity=0.511 Sum_probs=8.5
Q ss_pred ceEeeccCCC
Q 035377 2 KLFDAHCHLQ 11 (66)
Q Consensus 2 ~~iDsH~Hl~ 11 (66)
.+||+|+|++
T Consensus 67 G~ID~H~H~~ 76 (451)
T 4dyk_A 67 GLVNAHGHSA 76 (451)
T ss_dssp CEEECCCCGG
T ss_pred cccchhhChh
Confidence 3899999994
No 98
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=90.14 E-value=0.44 Score=29.94 Aligned_cols=21 Identities=14% Similarity=-0.187 Sum_probs=14.3
Q ss_pred HHHHHHhcCCcEEEeeccChh
Q 035377 22 LIATTVNSGVLHFAVNGVSEE 42 (66)
Q Consensus 22 ~~~~~~~~gv~~~~~~~~~~~ 42 (66)
.++++...||..++..+..++
T Consensus 137 ~~~~~l~~GvTtv~d~~~~~~ 157 (420)
T 2imr_A 137 GADTLTRLGAGGVGDIVWAPE 157 (420)
T ss_dssp HHHHHHHTTCCCEEEEECSHH
T ss_pred HHHHHHhcCcEEEEEccCCHH
Confidence 345677889998877665443
No 99
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=89.78 E-value=0.79 Score=28.36 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=23.7
Q ss_pred ceEeeccCCCCCc------CCCCHHH-------HHHHHHhcCCcEEEeecc
Q 035377 2 KLFDAHCHLQDPR------IFHKAPQ-------LIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 2 ~~iDsH~Hl~~~~------~~~~~~~-------~~~~~~~~gv~~~~~~~~ 39 (66)
.+||+|+|+.... +....++ ..+++...||..++..+.
T Consensus 59 GlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~ 109 (408)
T 3be7_A 59 GLMDSHVHIVGNDSKGEESIADSSHMGTVWGVVNAEKTLMAGFTTVRNVGA 109 (408)
T ss_dssp CEEEEEECCSSCCCCSGGGTTCCTHHHHHHHHHHHHHHHTTTEEEEEECCC
T ss_pred CceeeeEcccCCCCcchhhhcCCHHHHHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 3899999997111 1111111 456778899998877664
No 100
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=88.22 E-value=1.8 Score=26.92 Aligned_cols=11 Identities=45% Similarity=0.552 Sum_probs=9.2
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.|||+|+|+..
T Consensus 67 G~ID~H~H~~~ 77 (416)
T 2q09_A 67 GLIDCHTHLIF 77 (416)
T ss_dssp CEEEEEECCCC
T ss_pred cccccccCcch
Confidence 38999999964
No 101
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=88.14 E-value=0.84 Score=29.40 Aligned_cols=31 Identities=13% Similarity=0.224 Sum_probs=17.6
Q ss_pred HHHHhcCCcEEEeecc-ChhhHHHHHHHHHhC
Q 035377 24 ATTVNSGVLHFAVNGV-SEEDWNLVKDMSERH 54 (66)
Q Consensus 24 ~~~~~~gv~~~~~~~~-~~~~~~~~~~l~~~~ 54 (66)
.++.+.|+..++..++ .++....+.+.+.+.
T Consensus 151 ~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~ 182 (476)
T 4aql_A 151 RRTLKNGTTTACYFATIHTDSSLLLADITDKF 182 (476)
T ss_dssp HHHHHTTEEEEEEECCSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCeeEEEEecccCchHHHHHHHHHHHh
Confidence 4677789887765443 344444445544443
No 102
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=87.75 E-value=0.88 Score=27.93 Aligned_cols=36 Identities=11% Similarity=0.140 Sum_probs=21.7
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
.++.++++.++|+++++++-..+++..+..+.++++
T Consensus 114 ~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~ 149 (271)
T 3nav_A 114 IDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKF 149 (271)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHc
Confidence 455666666666666666555555555555555555
No 103
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=87.33 E-value=0.2 Score=29.51 Aligned_cols=11 Identities=45% Similarity=0.767 Sum_probs=9.2
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.+||+|+|+..
T Consensus 59 G~ID~H~H~~~ 69 (403)
T 3mtw_A 59 GLIDMHVHLDS 69 (403)
T ss_dssp CEEEEEECTTC
T ss_pred ChheeeeCCcc
Confidence 38999999864
No 104
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=87.32 E-value=1.5 Score=27.44 Aligned_cols=11 Identities=27% Similarity=0.616 Sum_probs=9.2
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.+||+|+|+..
T Consensus 60 GlID~H~Hl~~ 70 (430)
T 1ra0_A 60 PFVEPHIHLDT 70 (430)
T ss_dssp CEEEEEECTTT
T ss_pred cccccccchhh
Confidence 38999999964
No 105
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=86.84 E-value=0.69 Score=28.57 Aligned_cols=36 Identities=8% Similarity=0.040 Sum_probs=22.7
Q ss_pred eEeeccCCCCC-cCCC-----C---HHHHHHHHHhcCCcEEEeec
Q 035377 3 LFDAHCHLQDP-RIFH-----K---APQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 3 ~iDsH~Hl~~~-~~~~-----~---~~~~~~~~~~~gv~~~~~~~ 38 (66)
+||+|+|+... .+.. . +.....++...|+..+...+
T Consensus 55 lID~H~H~~~g~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~ 99 (382)
T 1yrr_A 55 FIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTL 99 (382)
T ss_dssp EEEEEESEETTEESSSSTTTSSHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEeecccCCcCccccccCCCHHHHHHHHHHHHhCCeEEEEeec
Confidence 89999997421 1111 2 22355677789999877654
No 106
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=86.68 E-value=0.51 Score=29.18 Aligned_cols=36 Identities=17% Similarity=0.167 Sum_probs=21.5
Q ss_pred ceEeeccCCCCC----cC-CCCHHHHHHHHHhcCCcEEEee
Q 035377 2 KLFDAHCHLQDP----RI-FHKAPQLIATTVNSGVLHFAVN 37 (66)
Q Consensus 2 ~~iDsH~Hl~~~----~~-~~~~~~~~~~~~~~gv~~~~~~ 37 (66)
.+||+|+|+... .+ ..+.+....++...|+..++..
T Consensus 63 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~ 103 (390)
T 1onw_A 63 GFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGL 103 (390)
T ss_dssp CEEEEEECTTCCBCTTSGGGBCCCCCHHHHHHTTEEEEEEC
T ss_pred CeeEeeECccccCccccccccCHHHHHHHHHHCCeeEEecC
Confidence 389999998521 11 1122234567777888776654
No 107
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=86.40 E-value=0.46 Score=33.42 Aligned_cols=31 Identities=26% Similarity=0.505 Sum_probs=21.0
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccC
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVS 40 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~ 40 (66)
+||+|+|+..+. ....+...|+..++..|+.
T Consensus 403 fID~HvHl~~P~-------~~~eALasGVTTvv~gGtg 433 (840)
T 4gy7_A 403 AIDCHVHYICPQ-------LVYEAISSGITTLVGGGTG 433 (840)
T ss_dssp EEEEEEECCCTH-------HHHHHHHHTEEEEEEECSS
T ss_pred eeeeccCCCCCC-------chHHHHHhhHHHHHhCCCc
Confidence 899999986532 2345556788877765543
No 108
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=86.24 E-value=1.7 Score=27.62 Aligned_cols=10 Identities=20% Similarity=0.242 Sum_probs=8.5
Q ss_pred ceEeeccCCC
Q 035377 2 KLFDAHCHLQ 11 (66)
Q Consensus 2 ~~iDsH~Hl~ 11 (66)
.+||+|+|+.
T Consensus 51 GfId~H~H~~ 60 (453)
T 3mdu_A 51 GMPNLHSHAF 60 (453)
T ss_dssp CEEEEEECGG
T ss_pred cceecccchH
Confidence 3899999984
No 109
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=85.31 E-value=1.4 Score=26.92 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=19.1
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
.++.++++.++|+++++++-..+++..+..+.++++
T Consensus 112 ~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~ 147 (267)
T 3vnd_A 112 IDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAH 147 (267)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHc
Confidence 355555555555555555544455555555555544
No 110
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=85.15 E-value=2.9 Score=26.18 Aligned_cols=64 Identities=9% Similarity=0.049 Sum_probs=41.8
Q ss_pred ceEeeccCCCCC-c----------CCCCHHH---HHHHHHhcCCcEEEeeccC--hhhHHHHHHHHHhCC-CeEeeeeec
Q 035377 2 KLFDAHCHLQDP-R----------IFHKAPQ---LIATTVNSGVLHFAVNGVS--EEDWNLVKDMSERHP-SVIPCFGVH 64 (66)
Q Consensus 2 ~~iDsH~Hl~~~-~----------~~~~~~~---~~~~~~~~gv~~~~~~~~~--~~~~~~~~~l~~~~~-~i~~~~GiH 64 (66)
.+..+|=||... . ..++.+. -+++.++.|+..++.+++. -++...+.+++++.. +|..+.|+|
T Consensus 17 G~t~~HEHl~~~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y 96 (330)
T 3pnz_A 17 GFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFN 96 (330)
T ss_dssp CSEEEEECCSBCCHHHHTTTCGGGCBCCHHHHHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECC
T ss_pred CCceeccCceecChhhhhcCCCcccccCHHHHHHHHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCC
Confidence 467788888531 1 0123344 4556788999999876531 245666777888765 599999998
Q ss_pred C
Q 035377 65 P 65 (66)
Q Consensus 65 P 65 (66)
+
T Consensus 97 ~ 97 (330)
T 3pnz_A 97 K 97 (330)
T ss_dssp C
T ss_pred c
Confidence 5
No 111
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=85.06 E-value=3.7 Score=24.05 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
++.++.+.+.|++.+++.....++.++..+.+++++
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g 133 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEG 133 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhC
Confidence 677788888888887776666667777777777653
No 112
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=83.42 E-value=0.49 Score=27.92 Aligned_cols=11 Identities=36% Similarity=0.588 Sum_probs=9.2
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.|||+|+|+..
T Consensus 60 GfID~H~H~~~ 70 (426)
T 3mkv_A 60 GLIDLHVHVVA 70 (426)
T ss_dssp CEEEEEECTTC
T ss_pred ChhhhhhCccc
Confidence 38999999864
No 113
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=83.30 E-value=2.6 Score=26.65 Aligned_cols=31 Identities=16% Similarity=0.153 Sum_probs=19.5
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEee
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVN 37 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~ 37 (66)
+||.|+|+.. .. ...+.+ .|..-|+..++.+
T Consensus 30 ~ID~HvHlre-G~--~~~e~~-aA~aGG~Ttvi~m 60 (359)
T 3pnu_A 30 PLDMHLHLRD-NQ--MLELIA-PLSARDFCAAVIM 60 (359)
T ss_dssp CEEEEECCCS-HH--HHHHHH-HHHHTTCSEEEEC
T ss_pred cEEccccCCC-CC--cchhHH-HHHhCCCcEEEEC
Confidence 7999999975 11 122223 4555788887754
No 114
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=83.24 E-value=2.5 Score=26.66 Aligned_cols=40 Identities=13% Similarity=0.116 Sum_probs=29.1
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEe
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIP 59 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 59 (66)
+.++.++++.+.|++.++.+|... .+.+.+.+++||++.+
T Consensus 74 d~~~~l~~l~~~g~d~Ii~~g~~~--~~~~~~vA~~~Pdv~f 113 (356)
T 3s99_A 74 DAERSIKRIARAGNKLIFTTSFGY--MDPTVKVAKKFPDVKF 113 (356)
T ss_dssp HHHHHHHHHHHTTCSEEEECSGGG--HHHHHHHHTTCTTSEE
T ss_pred HHHHHHHHHHHCCCCEEEECCHHH--HHHHHHHHHHCCCCEE
Confidence 456788888889999777665443 3457788899997544
No 115
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=82.67 E-value=4.4 Score=22.40 Aligned_cols=39 Identities=5% Similarity=-0.187 Sum_probs=28.8
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
+...+.++++++.|+.-+++.|=..+....+.++.+++.
T Consensus 27 ~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~g 65 (142)
T 2obb_A 27 PFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARG 65 (142)
T ss_dssp TTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcC
Confidence 456889999999998766666645556777777777753
No 116
>2i5i_A UPF0249 protein EF_3048; putative cellobiose-phosphate cleavage protein, structural G joint center for structural genomics, JCSG; HET: MSE; 1.70A {Enterococcus faecalis} SCOP: c.6.2.8
Probab=82.04 E-value=3.3 Score=25.08 Aligned_cols=46 Identities=17% Similarity=0.169 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH-hCCCeEeeeeec
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE-RHPSVIPCFGVH 64 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~-~~~~i~~~~GiH 64 (66)
..+..=|.++.++|+-.-..+-++-..++.+.++++ ++|. ..+|+|
T Consensus 18 ~~vN~gI~~~~~~G~ltstslMvn~p~~~~A~~~~k~~~p~--l~vGlH 64 (263)
T 2i5i_A 18 PAVTQGIIEAHKRGVVTSTTALPTSPYFLEAMESARISAPT--LAIGVH 64 (263)
T ss_dssp HHHHHHHHHHHHSSSCCEEEECTTSTTHHHHHHHHHHHCTT--CEEEEE
T ss_pred hhHHHHHHHHHHCCcceEeeeccCCcHHHHHHHHHHHhCCC--CCEEEE
Confidence 345666777888888544344445677889999999 8887 477887
No 117
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=81.53 E-value=5 Score=24.98 Aligned_cols=49 Identities=8% Similarity=-0.016 Sum_probs=30.7
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChh--------hHHHHHHHHHhCCCeEeeeeecC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEE--------DWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~--------~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
..+++.+..+.+.||+.++++..++. +...++++.++.++...+++.+|
T Consensus 97 ~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~~f~IgvA~yP 153 (304)
T 3fst_A 97 DELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYP 153 (304)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHHCCCEEEEEECT
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeCC
Confidence 35778889999999999988865532 23345555555444444444433
No 118
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=80.62 E-value=3.7 Score=24.30 Aligned_cols=34 Identities=12% Similarity=0.004 Sum_probs=25.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~ 52 (66)
...+.+.+++.|+.++++.++.+++.+.+.+...
T Consensus 124 ~~~~a~~a~~~g~~GvV~sat~p~e~~~ir~~~~ 157 (222)
T 4dbe_A 124 ADYIKNVIREISPKGIVVGGTKLDHITQYRRDFE 157 (222)
T ss_dssp HHHHHHHHHHHCCSEEEECTTCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCCCEEEECCCCHHHHHHHHHhCC
Confidence 3667888889999999887777777776665543
No 119
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=80.59 E-value=4.1 Score=24.50 Aligned_cols=37 Identities=14% Similarity=0.179 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
.+..++++.++|+++++++...+++.....+.++++.
T Consensus 111 ~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~g 147 (262)
T 2ekc_A 111 LEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYV 147 (262)
T ss_dssp HHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcC
Confidence 3566777788888887777766777777777777663
No 120
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=80.27 E-value=3.1 Score=24.59 Aligned_cols=33 Identities=15% Similarity=-0.004 Sum_probs=25.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS 51 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~ 51 (66)
...+.+.+++.|+.++++.++.+++...+.+..
T Consensus 117 v~~~a~~a~~~G~~GvV~sat~~~e~~~ir~~~ 149 (215)
T 3ve9_A 117 YPYLREVARRVNPKGFVAPATRPSMISRVKGDF 149 (215)
T ss_dssp HHHHHHHHHHHCCSEEECCTTSHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCceeeCCCCHHHHHHHHHhC
Confidence 667888889999999987777777776655543
No 121
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=80.04 E-value=3.1 Score=26.31 Aligned_cols=11 Identities=27% Similarity=0.389 Sum_probs=9.0
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.+||+|+|+..
T Consensus 56 GlId~H~H~~~ 66 (427)
T 3v7p_A 56 GFANPHLHLEF 66 (427)
T ss_dssp CEEEEEECGGG
T ss_pred CEeecccCcch
Confidence 38999999953
No 122
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=79.61 E-value=3 Score=26.94 Aligned_cols=49 Identities=12% Similarity=-0.084 Sum_probs=32.4
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccC-----------hh--------hHHHHHHHHH-hCC-C-eEeeeeecC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVS-----------EE--------DWNLVKDMSE-RHP-S-VIPCFGVHP 65 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~-----------~~--------~~~~~~~l~~-~~~-~-i~~~~GiHP 65 (66)
-+.++.++.+.+.||++.++..+. ++ .++.+.+..+ ++| + +++.+.+.|
T Consensus 101 ~d~e~rl~~MD~~GId~~Vl~p~~~~~~~~~~~~d~e~a~~~~r~~Nd~lae~~~~~~P~~Rf~g~a~v~~ 171 (423)
T 4dzi_A 101 QNRDARIAVMDEQDIETAFMLPTFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDHRIIAAPIVSL 171 (423)
T ss_dssp TCHHHHHHHHHHHTEEEEEEECSGGGGHHHHTTTCHHHHHHHHHHHHHHHHHHTCSSCTTCCEEECCBCCC
T ss_pred CCHHHHHHHHHHcCCcEEEECCCchhhccccccCCHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCCc
Confidence 378999999999999976554321 11 1455666666 788 5 555555554
No 123
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=79.47 E-value=2.7 Score=24.89 Aligned_cols=32 Identities=13% Similarity=0.243 Sum_probs=20.8
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHH
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS 51 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~ 51 (66)
+.+.+.+.+.|+.++++.++.+++...+.+..
T Consensus 140 ~~~a~~a~~~G~~GvV~~at~~~e~~~ir~~~ 171 (228)
T 3m47_A 140 DEIARMGVDLGVKNYVGPSTRPERLSRLREII 171 (228)
T ss_dssp HHHHHHHHHTTCCEEECCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEECCCChHHHHHHHHhc
Confidence 45666777888888776555566665555544
No 124
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=79.34 E-value=0.56 Score=29.07 Aligned_cols=10 Identities=30% Similarity=0.587 Sum_probs=8.3
Q ss_pred ceEeeccCCC
Q 035377 2 KLFDAHCHLQ 11 (66)
Q Consensus 2 ~~iDsH~Hl~ 11 (66)
.|||+|+|+.
T Consensus 88 G~ID~H~H~~ 97 (479)
T 3hpa_A 88 GLVNTHHHMY 97 (479)
T ss_dssp CEEECCCCGG
T ss_pred CceeHhhCcc
Confidence 3899999973
No 125
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=79.16 E-value=2.4 Score=26.99 Aligned_cols=28 Identities=18% Similarity=0.251 Sum_probs=19.7
Q ss_pred ceEeeccCCCCCcCCCCHHHHHHHHHhcCCc
Q 035377 2 KLFDAHCHLQDPRIFHKAPQLIATTVNSGVL 32 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~ 32 (66)
+-++.||||+. .-.++.+++-|+++|+.
T Consensus 7 PK~ELH~HL~G---sl~p~tl~~La~~~~~~ 34 (367)
T 3iar_A 7 PKVELHVHLDG---SIKPETILYYGRRRGIA 34 (367)
T ss_dssp CEEECCBBGGG---SCCHHHHHHHHHHHTCC
T ss_pred CeeEeeecccC---CCCHHHHHHHHHhcCCC
Confidence 35899999975 22467777777777764
No 126
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=79.11 E-value=6.1 Score=23.93 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=25.6
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
+.++.++++.+.|++.+++++....+. +.++++++|+
T Consensus 50 ~~~~~l~~l~~~~~dgIi~~~~~~~~~--~~~~a~~~p~ 86 (318)
T 2fqx_A 50 EYVPSLSAFADENMGLVVACGSFLVEA--VIETSARFPK 86 (318)
T ss_dssp GHHHHHHHHHHTTCSEEEEESTTTHHH--HHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCCEEEECChhHHHH--HHHHHHHCCC
Confidence 455678888888999988877554432 5566677765
No 127
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=78.73 E-value=1.4 Score=27.81 Aligned_cols=10 Identities=20% Similarity=0.292 Sum_probs=8.5
Q ss_pred ceEeeccCCC
Q 035377 2 KLFDAHCHLQ 11 (66)
Q Consensus 2 ~~iDsH~Hl~ 11 (66)
.+||+|+|+.
T Consensus 60 GlID~H~H~~ 69 (458)
T 4f0l_A 60 GMANLHSHAF 69 (458)
T ss_dssp CEEEEEECGG
T ss_pred Cceecccchh
Confidence 3899999984
No 128
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=78.30 E-value=5.9 Score=24.58 Aligned_cols=49 Identities=12% Similarity=0.026 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChh--------------hHHHHHHHHHhC-CC-eEeeeeecC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEE--------------DWNLVKDMSERH-PS-VIPCFGVHP 65 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~--------------~~~~~~~l~~~~-~~-i~~~~GiHP 65 (66)
..+.+.+..+.+.||+.++++..++. +...++++.++. +. ...+++.+|
T Consensus 86 ~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yP 150 (310)
T 3apt_A 86 KEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYP 150 (310)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECT
T ss_pred HHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 35778888999999999887765431 344555555554 43 555666666
No 129
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=78.06 E-value=2.5 Score=25.67 Aligned_cols=33 Identities=9% Similarity=0.109 Sum_probs=22.6
Q ss_pred HHHHHHHHh----cCCcEEEeeccChhhHHHHHHHHH
Q 035377 20 PQLIATTVN----SGVLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 20 ~~~~~~~~~----~gv~~~~~~~~~~~~~~~~~~l~~ 52 (66)
+.+++.++. .|..++++.+|.+++...+.+...
T Consensus 156 ~~V~~~a~~~~~~~g~~GvV~~at~~~e~~~ir~~~~ 192 (255)
T 3qw3_A 156 EAVAERAEGPWNVNGNVGLVVGATDPVALARVRARAP 192 (255)
T ss_dssp HHHHHHHHTGGGGGSCEEEEECSSCHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhhhhCCeEEEECCCCHHHHHHHHHHCC
Confidence 556666555 788888777777887776655443
No 130
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=77.97 E-value=0.82 Score=28.49 Aligned_cols=11 Identities=45% Similarity=0.531 Sum_probs=9.1
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.|||+|+|+..
T Consensus 75 GfID~H~H~~~ 85 (421)
T 2bb0_A 75 GLVDPHTHLVF 85 (421)
T ss_dssp CEEECCBCCCC
T ss_pred CeeccCcCccc
Confidence 38999999964
No 131
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=77.88 E-value=9.3 Score=23.34 Aligned_cols=44 Identities=16% Similarity=0.081 Sum_probs=29.2
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHhC-CCeEeeee
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSERH-PSVIPCFG 62 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~~-~~i~~~~G 62 (66)
..++++...+.|+.++++.|++ .++..++++.+.+. .+|+..+|
T Consensus 22 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGvg 73 (293)
T 1w3i_A 22 LKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVG 73 (293)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEecC
Confidence 5577788888999999888864 44555666665554 23555544
No 132
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=77.46 E-value=3.8 Score=27.63 Aligned_cols=37 Identities=22% Similarity=0.177 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
+.+-+++|.++||+.++.+|.+.+|- ++++.+.++.-
T Consensus 475 F~D~ve~aa~aGv~aIiQPGGSiRD~-evI~aane~gi 511 (523)
T 3zzm_A 475 FPDGLETLAAAGVTAVVHPGGSVRDE-EVTEAAAKAGV 511 (523)
T ss_dssp SHHHHHHHHHTTCCEEEECCCCTTHH-HHHHHHHHHTC
T ss_pred CCccHHHHHHcCCEEEECCCCCCCcH-HHHHHHHHcCC
Confidence 56788999999999999999998887 56777888754
No 133
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=76.47 E-value=7.9 Score=22.38 Aligned_cols=45 Identities=11% Similarity=0.169 Sum_probs=25.6
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccCh-hhHHHHHHHHHhC
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSE-EDWNLVKDMSERH 54 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~-~~~~~~~~l~~~~ 54 (66)
+.|.|.| +. ....++.+.++|++.+.+.+... +..+++++.++++
T Consensus 63 ~ld~~l~-d~------p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~ 108 (218)
T 3jr2_A 63 VCDMKTT-DG------GAILSRMAFEAGADWITVSAAAHIATIAACKKVADEL 108 (218)
T ss_dssp EEEEEEC-SC------HHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHH
T ss_pred EEEEeec-cc------HHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHh
Confidence 3577665 32 34456777777777766665443 3345555555554
No 134
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=76.19 E-value=0.92 Score=28.19 Aligned_cols=11 Identities=45% Similarity=0.585 Sum_probs=9.0
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.|||+|+|+..
T Consensus 79 G~ID~H~H~~~ 89 (419)
T 2puz_A 79 ALIDCHTHLVF 89 (419)
T ss_dssp CEEECCCCCCC
T ss_pred CceecccCccc
Confidence 38999999953
No 135
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=76.06 E-value=9.8 Score=22.48 Aligned_cols=46 Identities=15% Similarity=0.171 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeee
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
++..++++++.+.|++.+-+.-.++...+.+.++++++|.+...+|
T Consensus 29 ~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaG 74 (224)
T 1vhc_A 29 DDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAG 74 (224)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeC
Confidence 3567788899999998554433334444445558999988665555
No 136
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=76.04 E-value=9.5 Score=23.23 Aligned_cols=44 Identities=14% Similarity=0.111 Sum_probs=28.7
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHhCC-CeEeeee
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSERHP-SVIPCFG 62 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~~~-~i~~~~G 62 (66)
..++++...+.|+.++++.|++ .++-.++++.+.+.- +|...+|
T Consensus 22 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gViaGvg 73 (288)
T 2nuw_A 22 LKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQVG 73 (288)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeEEeeC
Confidence 5577788888999999888864 445556666655432 2555444
No 137
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=75.77 E-value=8.1 Score=23.50 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=27.8
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHhC-CCeEeeee
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSERH-PSVIPCFG 62 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~~-~~i~~~~G 62 (66)
..++++...+.|+.++++.|++ .++..++++.+.+. .+|...+|
T Consensus 21 l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg 72 (286)
T 2r91_A 21 FANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQVA 72 (286)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEECC
T ss_pred HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEeeC
Confidence 5677777788899998888764 34455555554432 23555444
No 138
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=75.51 E-value=1.5 Score=26.33 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=29.9
Q ss_pred CHHHHHHHHHhcCCcEEEeeccCh---hhHHHHHHHHHhCCCeEeeeeec
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSE---EDWNLVKDMSERHPSVIPCFGVH 64 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~---~~~~~~~~l~~~~~~i~~~~GiH 64 (66)
.++++++.+.+.+++.+++.|--. .+..+++++.++.+.++...|=|
T Consensus 26 ~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~~~~~v~GNh 75 (270)
T 3qfm_A 26 ALEAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLPITARVLGNW 75 (270)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSCEEEECCCHH
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccCCEEEEcCCh
Confidence 467788888888899988877211 12345666666654455555544
No 139
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=73.78 E-value=8.7 Score=22.60 Aligned_cols=38 Identities=18% Similarity=0.133 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHhcC-CcEEEeeccChhhHHHHHHHHHhC
Q 035377 17 HKAPQLIATTVNSG-VLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 17 ~~~~~~~~~~~~~g-v~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
++..+.++++.+.| |-++.++..+.+|..+++++.++.
T Consensus 125 ~el~~~~~~~~~~gaivKia~~a~~~~D~l~ll~~~~~~ 163 (219)
T 2egz_A 125 WIIREVLREGYRYGGIPKIAVKANSYEDVARLLCISRQV 163 (219)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCEEEEEEccCCHHHHHHHHHHHHhC
Confidence 34566777887777 777888888899998888887654
No 140
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=73.71 E-value=0.8 Score=28.22 Aligned_cols=11 Identities=36% Similarity=0.721 Sum_probs=9.2
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.+||+|+|+..
T Consensus 55 GlID~H~H~~~ 65 (403)
T 2qt3_A 55 GFVDAHTHMDK 65 (403)
T ss_dssp CEEEEEECGGG
T ss_pred cceeeeeccch
Confidence 38999999964
No 141
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=72.61 E-value=7.8 Score=23.02 Aligned_cols=47 Identities=15% Similarity=0.169 Sum_probs=26.2
Q ss_pred CHHHHHHHHHhcCCcEEEeeccC-hhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVS-EEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~-~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
|.+.+++.+.++|.+.+.+-+-. .....+.++..+++ ++...+.+.|
T Consensus 68 dp~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~-G~k~gv~lnp 115 (231)
T 3ctl_A 68 RPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRH-DMKVGLILNP 115 (231)
T ss_dssp CGGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHT-TCEEEEEECT
T ss_pred CHHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHc-CCeEEEEEEC
Confidence 34556677777777765443322 23456666666665 4445555554
No 142
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=72.32 E-value=8.1 Score=22.94 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHhcC--CcEEEeeccChhhHHHHHHHHH
Q 035377 17 HKAPQLIATTVNSG--VLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 17 ~~~~~~~~~~~~~g--v~~~~~~~~~~~~~~~~~~l~~ 52 (66)
++..+.++++.+.| |-++.++..+.+|..+++++..
T Consensus 128 ~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~ 165 (231)
T 2ocz_A 128 ENLMEAFSEMTKLAPRVVKIAVMPQSEQDVLDLMNYTR 165 (231)
T ss_dssp TTHHHHHHHHHHTCCSEEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHHHHH
Confidence 67888999999888 6688888888999888877654
No 143
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=72.15 E-value=1.1 Score=29.37 Aligned_cols=11 Identities=36% Similarity=0.443 Sum_probs=9.3
Q ss_pred eEeeccCCCCC
Q 035377 3 LFDAHCHLQDP 13 (66)
Q Consensus 3 ~iDsH~Hl~~~ 13 (66)
+||+|+|+...
T Consensus 129 ~ID~HvH~~~~ 139 (566)
T 4ep8_C 129 GIDTHIHWICP 139 (566)
T ss_dssp EEEEEEECSCT
T ss_pred EEEecccccCC
Confidence 89999999753
No 144
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=72.07 E-value=11 Score=21.32 Aligned_cols=37 Identities=11% Similarity=0.001 Sum_probs=24.9
Q ss_pred HHHHHHHHHhcCCcEEEeeccCh-hhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSE-EDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~-~~~~~~~~l~~~~~ 55 (66)
.+..++++.+.|++.+++.+... ++.+++.+.++++.
T Consensus 66 ~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g 103 (211)
T 3f4w_A 66 GHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG 103 (211)
T ss_dssp HHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC
Confidence 34458888888888877665543 44567777777663
No 145
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=70.32 E-value=6.2 Score=26.38 Aligned_cols=48 Identities=10% Similarity=0.005 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhh-HHHHHHHHHhCCCeEeeeeec
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEED-WNLVKDMSERHPSVIPCFGVH 64 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~~GiH 64 (66)
..+..+++...+.|=.++++...++.+ ++.+.-++..||+|+...|+.
T Consensus 340 ~~L~~lL~~l~~~~~pktILy~Lnp~~y~~elatlag~Fpkvq~G~~WW 388 (497)
T 2q01_A 340 DALKPLLTRLGNDPRLSIILFTLDETTYSRELAPLAGHYPVLKLGPSWW 388 (497)
T ss_dssp TTSHHHHHHHTTCTTCCEEECCSCTTHHHHTHHHHHTTCTTEEECCCCG
T ss_pred HHHHHHHHHHhhcCCCCeEEEeCCcchhHHHHHHHHccCCccccCCchh
Confidence 447778888877764466677889998 778888999999999887753
No 146
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=70.25 E-value=12 Score=23.18 Aligned_cols=43 Identities=16% Similarity=0.265 Sum_probs=30.7
Q ss_pred HHHHHHHHHhcCCcEEEee--ccChhhHHHHHHHHHhCCCeEeeee
Q 035377 19 APQLIATTVNSGVLHFAVN--GVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~--~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
.++++.+..+.|+.++=+. +.+.++.++..++++++. +..+.|
T Consensus 215 ~~~~l~~l~~~GldgIEv~~~~~~~~~~~~~~~lA~~~g-L~~tgG 259 (301)
T 3o0f_A 215 SDEQLDAMIADGLDGLEVWHRGNPPEQRERLLTIAARHD-LLVTGG 259 (301)
T ss_dssp CHHHHHHHHHHTCCEEEEESTTSCHHHHHHHHHHHHHHT-CEEEEC
T ss_pred cHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcC-CceEEE
Confidence 4678888888898875443 346778888999999974 444444
No 147
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=70.24 E-value=13 Score=21.45 Aligned_cols=37 Identities=14% Similarity=0.272 Sum_probs=21.4
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
+.+.+.++.|...|...+++. ...+.++++.++++++
T Consensus 91 ~~~~~~i~~A~~lGa~~v~~~-~~~~~~~~l~~~a~~~ 127 (262)
T 3p6l_A 91 SDWEKMFKFAKAMDLEFITCE-PALSDWDLVEKLSKQY 127 (262)
T ss_dssp THHHHHHHHHHHTTCSEEEEC-CCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEec-CCHHHHHHHHHHHHHh
Confidence 345566666666666655432 3445666666666654
No 148
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=70.20 E-value=8.4 Score=19.91 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=25.2
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHH-HHHHHHHh
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWN-LVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~-~~~~l~~~ 53 (66)
|..+.-.+|++.||..-++-++++++.. ++.++.+.
T Consensus 65 dvnefqneakkegvsydvlkstdpeeltqrvreflkt 101 (112)
T 2lnd_A 65 DVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLKT 101 (112)
T ss_dssp HHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHHh
Confidence 5667777888888887777788887754 45555544
No 149
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=69.86 E-value=15 Score=21.97 Aligned_cols=45 Identities=11% Similarity=0.123 Sum_probs=29.9
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeee
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
+..++.+.+.+.|+..+=+.-.++...+.+.++.+++|.+...+|
T Consensus 47 ~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaG 91 (232)
T 4e38_A 47 DIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAG 91 (232)
T ss_dssp GHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeEC
Confidence 466677778888888665544455555566667888887554444
No 150
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=69.76 E-value=3.1 Score=26.59 Aligned_cols=27 Identities=26% Similarity=0.428 Sum_probs=18.8
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCc
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVL 32 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~ 32 (66)
=+|.||||+. .-..+.+++-|+++|+.
T Consensus 31 KvELH~HLdG---sl~p~tl~~LA~~~g~~ 57 (380)
T 4gxw_A 31 KVELHCHLLG---AVRHDTFVALAQRSGAP 57 (380)
T ss_dssp EEECCBBGGG---CCCHHHHHHHHHHHTCS
T ss_pred hHHhhcCCcC---CCCHHHHHHHHHHhCCC
Confidence 4899999985 22466677777777753
No 151
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=69.75 E-value=1.6 Score=27.27 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=20.5
Q ss_pred ceEeeccCCCCCcC--CCCHHHHHHHHHhcCCcEEEeec
Q 035377 2 KLFDAHCHLQDPRI--FHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~--~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
.+||+|+|+..... ..+. .+.+...|+..++..+
T Consensus 72 GlID~H~H~~~~~~~~~~~~---~~~~l~~GvTtv~d~~ 107 (417)
T 2ogj_A 72 GWVDLHVHIWHGGTDISIRP---SECGAERGVTTLVDAG 107 (417)
T ss_dssp CEEEEEECCCBTTBSSCCCG---GGTSGGGTEEEEEEES
T ss_pred CeeeccccccccccccCCCH---HHHHHhCCcCeEEeCC
Confidence 38999999964221 1111 1245677888777654
No 152
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=69.58 E-value=2.9 Score=26.37 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=18.2
Q ss_pred CceEeeccCCCCCcCCCCHHHHHHHHHhcCC
Q 035377 1 MKLFDAHCHLQDPRIFHKAPQLIATTVNSGV 31 (66)
Q Consensus 1 m~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv 31 (66)
|+-+|.|+||+. .-..+.+++-++++|+
T Consensus 44 lPK~eLH~Hl~g---sl~~~~l~~la~~~~~ 71 (371)
T 2pgf_A 44 IPKCELHCHLDL---CFSADFFVSCIRKYNL 71 (371)
T ss_dssp SCEEEEEEEGGG---CCCHHHHHHHHHHTTC
T ss_pred CcHhhheeCCcc---CCCHHHHHHHHHHcCC
Confidence 456899999974 2235556666666665
No 153
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=69.28 E-value=16 Score=21.97 Aligned_cols=49 Identities=20% Similarity=0.232 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccC-----hhhHHHHHHHHHhCC---CeEeeeeecC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVS-----EEDWNLVKDMSERHP---SVIPCFGVHP 65 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~-----~~~~~~~~~l~~~~~---~i~~~~GiHP 65 (66)
.|..+-++...+.|+++++..|.. .+..+.+.+|.++.. .|.+..|+-|
T Consensus 133 ~d~~~ale~L~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~ 189 (224)
T 2bdq_A 133 SDQKKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTA 189 (224)
T ss_dssp TTHHHHHHHHHHTTCCEEEECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEECSSCCT
T ss_pred cCHHHHHHHHHHcCCCEEECCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeCCCCCH
Confidence 577888999999999999987632 334555556655432 3667777754
No 154
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=68.62 E-value=6.8 Score=24.95 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=22.7
Q ss_pred hcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeee
Q 035377 28 NSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 28 ~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
+.|..++++.+|.+++...+.+....++-+.|.+|
T Consensus 252 ~~G~~GvV~GATsp~e~~~iR~~~p~~~iLtPGIG 286 (342)
T 3n3m_A 252 NNEFIGFVVGANSYDEMNYIRTYFPNCYILSPGIG 286 (342)
T ss_dssp GTCCEEEEECTTCHHHHHHHHHHSTTCCEEECCSS
T ss_pred ccCCceEEECCCCHHHHHHHHHhCCCCeEEeCCCC
Confidence 57888898888888887776655433332444443
No 155
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=68.45 E-value=20 Score=23.97 Aligned_cols=47 Identities=21% Similarity=0.169 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH---hCCCeEeeeee
Q 035377 16 FHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE---RHPSVIPCFGV 63 (66)
Q Consensus 16 ~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~---~~~~i~~~~Gi 63 (66)
..+.+++++..++.||+.++++|.+ .++.-+..|++ +++.=.+.+|+
T Consensus 175 ~~~~~~i~~~l~~~~Id~LvvIGGd-gS~~~A~~L~e~~~~~g~~i~vVGI 224 (487)
T 2hig_A 175 PQDPKEMVDTLERLGVNILFTVGGD-GTQRGALVISQEAKRRGVDISVFGV 224 (487)
T ss_dssp CCCHHHHHHHHHHHTCSEEEEEECH-HHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEeCCC-chHHHHHHHHHHHHHhCCCceEEec
Confidence 4467889999999999999999953 55555555543 33322355665
No 156
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=68.40 E-value=17 Score=21.89 Aligned_cols=22 Identities=9% Similarity=-0.028 Sum_probs=15.9
Q ss_pred CHHHHHHHHHhcCCcEEEeecc
Q 035377 18 KAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
.+++.++.|.+.|+..+++.+.
T Consensus 115 ~~~~~i~~A~~lG~~~v~~~~~ 136 (305)
T 3obe_A 115 FWKKATDIHAELGVSCMVQPSL 136 (305)
T ss_dssp HHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEeCCC
Confidence 3566777888888888776553
No 157
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=68.31 E-value=16 Score=21.57 Aligned_cols=47 Identities=15% Similarity=0.208 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeee
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGV 63 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~Gi 63 (66)
++..++++++.+.|+..+-+.-.++...+.+.++++++|.+...+|.
T Consensus 38 ~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagt 84 (225)
T 1mxs_A 38 EDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGT 84 (225)
T ss_dssp GGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCe
Confidence 35677888999999985543333343344444588999886655553
No 158
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=68.27 E-value=9.1 Score=22.97 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=20.2
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
++.++++.++|+++++++....++..+..+.++++
T Consensus 112 ~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~ 146 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVADVPVEESAPFRQAALRH 146 (268)
T ss_dssp HHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 55666666666666665555555555555555554
No 159
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=68.13 E-value=16 Score=21.64 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=24.5
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS 51 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~ 51 (66)
++..+++|++.|++.+++.+++=+.-.++++..
T Consensus 32 l~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~ 64 (201)
T 1vp8_A 32 LRLAVERAKELGIKHLVVASSYGDTAMKALEMA 64 (201)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHh
Confidence 444567888899999988887777766666644
No 160
>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8
Probab=68.05 E-value=10 Score=25.12 Aligned_cols=44 Identities=7% Similarity=0.037 Sum_probs=33.1
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeec
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVH 64 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiH 64 (66)
+..++++.... .++++...++.+++.+..++..||+|+...|+.
T Consensus 336 L~~lL~~~~~~--~k~iLy~Lnp~~~~~la~lag~Fp~vq~g~~WW 379 (463)
T 1j5s_A 336 LRYFLNEFDGK--LKIVLYVLDPTHLPTISTIARAFPNVYVGAPWW 379 (463)
T ss_dssp HHHHHHHSTTT--SCEEEEESSGGGHHHHHHHHHHCTTEEECCCCS
T ss_pred HHHHHHhcccC--CCeEEEecCHhhHHHHHHHHccCCccccCCchh
Confidence 44455554443 456677889999999999999999999887763
No 161
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=67.97 E-value=16 Score=21.37 Aligned_cols=46 Identities=20% Similarity=0.234 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeee
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
++..++++++.+.|++.+-+.-.++...+.+.++++++|.+...+|
T Consensus 28 ~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgag 73 (214)
T 1wbh_A 28 EHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAG 73 (214)
T ss_dssp GGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeC
Confidence 3567788899999998554433344444444558899987554444
No 162
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=67.29 E-value=5.5 Score=24.26 Aligned_cols=36 Identities=3% Similarity=0.057 Sum_probs=20.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
.+..++++.++|+++++++...+++.....+.++++
T Consensus 108 ~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~ 143 (271)
T 1ujp_A 108 PERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEI 143 (271)
T ss_dssp HHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHc
Confidence 345566666666666666655555555555554443
No 163
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=66.72 E-value=7.6 Score=26.28 Aligned_cols=37 Identities=16% Similarity=0.061 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
+.+-+++|.++||+.++.+|.+.+|-+- ++.+.++.-
T Consensus 486 F~D~ve~Aa~aGV~aIiQPGGSiRD~ev-I~aane~gi 522 (534)
T 4ehi_A 486 FRDSIDEASKVGVKAIVEPGGSIRDDEV-VKAADEYGM 522 (534)
T ss_dssp STHHHHHHHHTTCCEEEECCCCTTHHHH-HHHHHHHTC
T ss_pred CCccHHHHHHcCCEEEECCCCCCccHHH-HHHHHHcCC
Confidence 4577889999999999999999888764 666777753
No 164
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=66.26 E-value=2.2 Score=27.50 Aligned_cols=11 Identities=27% Similarity=0.293 Sum_probs=8.9
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.+||+|+|++.
T Consensus 61 G~iD~H~H~~~ 71 (480)
T 3gip_A 61 GFIDVHGHDDL 71 (480)
T ss_dssp CEEESSCCCTT
T ss_pred CEEeccccccc
Confidence 38999999763
No 165
>3vi3_B Integrin beta-1; beta propeller fold, rossman fold, beta sandwich, fibronecti receptor, cell adhesion-immune system complex; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 3vi4_B*
Probab=66.26 E-value=20 Score=23.75 Aligned_cols=50 Identities=14% Similarity=0.253 Sum_probs=32.4
Q ss_pred eeccCCCCCc-------CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 5 DAHCHLQDPR-------IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 5 DsH~Hl~~~~-------~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
|-+|||+... -++.+..+.+.+.+++|.-|++|.-. ....-.+|++-.|+
T Consensus 278 Dg~CHL~~~~Yt~s~~~DYPSv~ql~~~l~e~nI~~IFAVt~~--~~~~Y~~L~~~ip~ 334 (454)
T 3vi3_B 278 DGQCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEE--FQPVYKELKNLIPK 334 (454)
T ss_dssp CCCCCEETTEECCTTTSCCCCHHHHHHHHHHTTEEEEEEEEGG--GHHHHHHHHHHSTT
T ss_pred CCccEeCCCcccccccCCCCCHHHHHHHHHhcCCcEEEEEcCc--cchHHHHHHHhCCC
Confidence 6789987311 13568999999999999888877543 22223345555554
No 166
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=65.83 E-value=4.7 Score=25.36 Aligned_cols=28 Identities=14% Similarity=0.273 Sum_probs=20.4
Q ss_pred ceEeeccCCCCCcCCCCHHHHHHHHHhcCCc
Q 035377 2 KLFDAHCHLQDPRIFHKAPQLIATTVNSGVL 32 (66)
Q Consensus 2 ~~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~ 32 (66)
+=++.||||+. .-.++.+++-|+++|+.
T Consensus 14 PK~ELH~Hl~G---sl~p~tl~~la~~~~~~ 41 (343)
T 3rys_A 14 PVAELHLHIEG---TLQPELIFALAERNGIE 41 (343)
T ss_dssp CEEECSBBGGG---GCCHHHHHHHHHHTTCC
T ss_pred CceeeEecCcc---CCCHHHHHHHHHhcCCC
Confidence 35789999975 23567777778888764
No 167
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=65.81 E-value=10 Score=25.24 Aligned_cols=37 Identities=16% Similarity=0.057 Sum_probs=29.8
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
+.+-+++|.++||+.++.+|.+.+|-+ +++.+.++.-
T Consensus 416 F~D~v~~aa~aGv~aIiQPGGSiRD~e-vI~aane~gi 452 (464)
T 1zcz_A 416 FPDSLEILAQAGVKAVVAPLGSIRDEE-VIEKARELGI 452 (464)
T ss_dssp SHHHHHHHHHTTCCEEEECCCCTTHHH-HHHHHHHHTC
T ss_pred chhhHHHHHHhCCeEEEcCCCCcCcHH-HHHHHHHcCC
Confidence 467788999999999999999988865 4666777653
No 168
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=65.61 E-value=14 Score=22.47 Aligned_cols=38 Identities=13% Similarity=0.072 Sum_probs=28.8
Q ss_pred CHHHHHHHHHhcCCcEEEeec--cChhhHHHHHHHHHhCC
Q 035377 18 KAPQLIATTVNSGVLHFAVNG--VSEEDWNLVKDMSERHP 55 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~--~~~~~~~~~~~l~~~~~ 55 (66)
...+++.++.+.|+..+++.+ .+.++.+++.+++++++
T Consensus 76 ~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~g 115 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG 115 (288)
T ss_dssp GHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 467888899999998765544 36677778899888764
No 169
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=65.54 E-value=16 Score=22.53 Aligned_cols=45 Identities=11% Similarity=0.123 Sum_probs=22.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
-.++++.+.+.|+.-.+++|.+ ....+...+.--..=|..+|+||
T Consensus 106 g~~lv~~~~~~gi~v~viPGiS--A~~aA~a~~Glp~~~f~f~g~~p 150 (296)
T 3kwp_A 106 GHELVNACIDAHIPVVPLPGAN--AGLTALIASGLAPQPFYFYGFLD 150 (296)
T ss_dssp HHHHHHHHHHTTCCEEECCCCC--HHHHHHHHHSSCCSSEEEEEECC
T ss_pred chHHHHHHHHcCCCeeeCCCcc--cchHHHHhccCCCCceeEEeecc
Confidence 4456666666676665666643 22223332222112334457776
No 170
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=65.30 E-value=17 Score=20.87 Aligned_cols=62 Identities=11% Similarity=0.208 Sum_probs=36.0
Q ss_pred eEeeccCCCCCcCC------CCHHHHHHHHHhc--CCcEEEeecc-----ChhhHHHHHHHHHhCC-CeEeeeeec
Q 035377 3 LFDAHCHLQDPRIF------HKAPQLIATTVNS--GVLHFAVNGV-----SEEDWNLVKDMSERHP-SVIPCFGVH 64 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~------~~~~~~~~~~~~~--gv~~~~~~~~-----~~~~~~~~~~l~~~~~-~i~~~~GiH 64 (66)
+-|+|......... ..++++++.+.+. +++.++..|- ..++++...++.++.+ .++...|=|
T Consensus 6 iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~p~~~v~GNH 81 (274)
T 3d03_A 6 ISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGNH 81 (274)
T ss_dssp ECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCTT
T ss_pred EecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 45777654221111 2356677777664 5777777663 2344666666666654 277888866
No 171
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=65.06 E-value=11 Score=21.87 Aligned_cols=60 Identities=12% Similarity=-0.219 Sum_probs=36.0
Q ss_pred EeeccCCCCCcCCCCH-HHHHHHHHhcCCcEEEeeccC-----------hhhHHHHHHHHHhCCC-eEeeeee
Q 035377 4 FDAHCHLQDPRIFHKA-PQLIATTVNSGVLHFAVNGVS-----------EEDWNLVKDMSERHPS-VIPCFGV 63 (66)
Q Consensus 4 iDsH~Hl~~~~~~~~~-~~~~~~~~~~gv~~~~~~~~~-----------~~~~~~~~~l~~~~~~-i~~~~Gi 63 (66)
||.=.|.+...+..++ .++++.|.+.||.-=+..+.- .+.+..+++++++|.. +..+-+-
T Consensus 97 vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~ivisSDA 169 (212)
T 1v77_A 97 VDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSA 169 (212)
T ss_dssp CSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred CCEEecccccccCCCCCHHHHHHHHHCCeEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 5666788765444444 588999999998543332221 1234567888988752 4444333
No 172
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=64.43 E-value=21 Score=21.70 Aligned_cols=36 Identities=6% Similarity=0.006 Sum_probs=25.9
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~~ 54 (66)
..++++...+.|+.++++.|++ .++..++++.+.+.
T Consensus 26 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 26 MIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 5677888888999999888874 44555666665543
No 173
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=64.07 E-value=15 Score=22.44 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=28.8
Q ss_pred CHHHHHHHHHhcCCcEEEeecc--ChhhHHHHHHHHHhCC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGV--SEEDWNLVKDMSERHP 55 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~--~~~~~~~~~~l~~~~~ 55 (66)
...+.++++.+.|+..+++.++ ..++.+++.+++++++
T Consensus 83 ~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~g 122 (297)
T 2yv2_A 83 FAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKG 122 (297)
T ss_dssp GHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 4678899999999997765443 5566778888888764
No 174
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=63.62 E-value=5.8 Score=23.74 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=20.8
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
.++.++.+.+.+++.+++++....+ .+.++++++|+
T Consensus 52 ~~~~l~~l~~~~vdgIi~~~~~~~~--~~~~~~~~~p~ 87 (296)
T 2hqb_A 52 AHRRIKELVDGGVNLIFGHGHAFAE--YFSTIHNQYPD 87 (296)
T ss_dssp HHHHHHHHHHTTCCEEEECSTHHHH--HHHTTTTSCTT
T ss_pred HHHHHHHHHHCCCCEEEEcCHhHHH--HHHHHHHHCCC
Confidence 3446667777788877766543322 24445555665
No 175
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=63.11 E-value=2.9 Score=26.89 Aligned_cols=11 Identities=27% Similarity=0.555 Sum_probs=9.0
Q ss_pred ceEeeccCCCC
Q 035377 2 KLFDAHCHLQD 12 (66)
Q Consensus 2 ~~iDsH~Hl~~ 12 (66)
.+||+|+|+..
T Consensus 75 G~iD~H~H~~~ 85 (496)
T 1rk6_A 75 GFIDSHTHDDN 85 (496)
T ss_dssp CEEESSCCCTT
T ss_pred CEeeeeecCCc
Confidence 38999999864
No 176
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=63.05 E-value=5.6 Score=24.81 Aligned_cols=27 Identities=19% Similarity=0.194 Sum_probs=19.6
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCc
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVL 32 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~ 32 (66)
=++.||||+. .-.++.+++-|+++|+.
T Consensus 12 K~ELH~Hl~G---sl~~~t~~~la~~~~~~ 38 (326)
T 3pao_A 12 KAELHLHLEG---TLEPELLFALAERNRIA 38 (326)
T ss_dssp EEECSBBGGG---GCCHHHHHHHHHHTTCC
T ss_pred ceEEEecccC---CCCHHHHHHHHHhcCCC
Confidence 4789999975 22467777777777764
No 177
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=62.93 E-value=19 Score=21.07 Aligned_cols=35 Identities=6% Similarity=-0.013 Sum_probs=16.8
Q ss_pred HHHHHHHHHhcCCcEEEeecc--ChhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGV--SEEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~--~~~~~~~~~~l~~~ 53 (66)
+++.++.+.+.|.+.+.+... ..+...+.++..++
T Consensus 74 p~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~ 110 (230)
T 1tqj_A 74 PEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRE 110 (230)
T ss_dssp GGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHH
Confidence 344556666666665544332 22334444444444
No 178
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=62.75 E-value=22 Score=21.17 Aligned_cols=46 Identities=20% Similarity=0.203 Sum_probs=32.7
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeee
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
++...+.+.+.+.|+..+=+.-.++.-.+.+.++.+++|.+...+|
T Consensus 25 ~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAG 70 (217)
T 3lab_A 25 VHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAG 70 (217)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeec
Confidence 3566778888889998765555566666667778888998555554
No 179
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=62.74 E-value=24 Score=23.19 Aligned_cols=37 Identities=16% Similarity=0.264 Sum_probs=29.6
Q ss_pred CHHHHHHHHHhcC--CcEEEeeccChhhHHHHHHHHHhC
Q 035377 18 KAPQLIATTVNSG--VLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 18 ~~~~~~~~~~~~g--v~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
+..++++++.+.| |-++..+..+.+|..+++++.++.
T Consensus 135 ~~~~~~~~~~~~gaDivKia~~a~~~~D~~~l~~~~~~~ 173 (523)
T 2o7s_A 135 DLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKA 173 (523)
T ss_dssp HHHHHHHHHHTTTCSEEEEEEECSSGGGHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHHHHHhhc
Confidence 4566777887777 668888888999999999887765
No 180
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=62.67 E-value=24 Score=21.65 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=24.7
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~ 53 (66)
+.++++...+.||.++++.|++ .++..++++.+.+
T Consensus 38 l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~ 79 (304)
T 3l21_A 38 AARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLE 79 (304)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHH
Confidence 5677888888999999988874 3445555555443
No 181
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=62.28 E-value=21 Score=21.88 Aligned_cols=34 Identities=15% Similarity=0.240 Sum_probs=24.3
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 35 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~ 75 (301)
T 1xky_A 35 TTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVV 75 (301)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHH
Confidence 5577888888999999988874 445555555544
No 182
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=62.00 E-value=19 Score=20.59 Aligned_cols=56 Identities=11% Similarity=-0.011 Sum_probs=26.8
Q ss_pred EeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh-CCCeEeeeeec
Q 035377 4 FDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER-HPSVIPCFGVH 64 (66)
Q Consensus 4 iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~-~~~i~~~~GiH 64 (66)
-|+|.......+...+.+++ ++.+++.++..| |.-+. +.++..++ ...++...|=|
T Consensus 32 SD~H~~~~~~~l~~~l~~~~---~~~~~D~vi~~G-Dl~~~-~~l~~l~~~~~~v~~V~GNH 88 (215)
T 2a22_A 32 GDLKIPYGAKELPSNFRELL---ATDKINYVLCTG-NVCSQ-EYVEMLKNITKNVYIVSGDL 88 (215)
T ss_dssp CCCCTTTTCSSCCGGGHHHH---HCTTCCEEEECS-CCCCH-HHHHHHHHHCSCEEECCCTT
T ss_pred ecCCCCCChHHHHHHHHHHH---hcCCCCEEEECC-CCCCH-HHHHHHHHcCCCEEEecCCC
Confidence 47775443222222233322 345678887777 44332 22333332 23477777755
No 183
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=61.87 E-value=18 Score=22.12 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=27.7
Q ss_pred HHHHHHHHHhcCCcEEEeec--cChhhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFAVNG--VSEEDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~--~~~~~~~~~~~l~~~~~ 55 (66)
..+.++++.+.|+..+++.+ ...++.+++.+++++++
T Consensus 83 ~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~g 121 (294)
T 2yv1_A 83 AKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVG 121 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 56788889999999766544 35566778888888764
No 184
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=61.79 E-value=12 Score=22.66 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCcEEE-eeccChhhHHHHHHHHHhCCCeE
Q 035377 19 APQLIATTVNSGVLHFA-VNGVSEEDWNLVKDMSERHPSVI 58 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~-~~~~~~~~~~~~~~l~~~~~~i~ 58 (66)
..+.+..+.++|+.-++ .+|.+.+..+++.+++++.|-++
T Consensus 85 ~~~~~~~a~~~G~~vVigTtG~~~e~~~~L~~~a~~~~vv~ 125 (273)
T 1dih_A 85 TLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVF 125 (273)
T ss_dssp HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHTTTSCEEE
T ss_pred HHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHhcCCCCEEE
Confidence 45778888999987444 33456677777777777655333
No 185
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=61.68 E-value=22 Score=21.61 Aligned_cols=34 Identities=18% Similarity=0.140 Sum_probs=23.7
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~ 64 (291)
T 3a5f_A 24 LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVI 64 (291)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHH
Confidence 5677788888999999888863 444555555444
No 186
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=61.56 E-value=14 Score=20.57 Aligned_cols=46 Identities=11% Similarity=0.123 Sum_probs=27.2
Q ss_pred HHHHHHHHHhcCCcEEEeecc------ChhhHHHHHHHHHhCC-CeEeeeeec
Q 035377 19 APQLIATTVNSGVLHFAVNGV------SEEDWNLVKDMSERHP-SVIPCFGVH 64 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~------~~~~~~~~~~l~~~~~-~i~~~~GiH 64 (66)
++++++.+.+.+++.+++.|- ..+++.+.++..++.+ .++...|=|
T Consensus 21 ~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNH 73 (228)
T 1uf3_A 21 LEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQ 73 (228)
T ss_dssp HHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTT
T ss_pred HHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCCC
Confidence 567777777667888877762 1222334444444433 377777766
No 187
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=61.42 E-value=15 Score=23.31 Aligned_cols=65 Identities=15% Similarity=0.166 Sum_probs=41.7
Q ss_pred CceEeeccCCCC--C-------cC-CCCHHHHH---HHHHhcCCcEEEeeccC--hhhHHHHHHHHHhC---C-CeEeee
Q 035377 1 MKLFDAHCHLQD--P-------RI-FHKAPQLI---ATTVNSGVLHFAVNGVS--EEDWNLVKDMSERH---P-SVIPCF 61 (66)
Q Consensus 1 m~~iDsH~Hl~~--~-------~~-~~~~~~~~---~~~~~~gv~~~~~~~~~--~~~~~~~~~l~~~~---~-~i~~~~ 61 (66)
|.+..+|=||.. . .+ ..|.+..+ .+.++.|+..++.+... -.+...+.+++++- . +|+.+.
T Consensus 20 lG~tl~HEHl~~~~~~~~~~~~~~~l~d~~~~~~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~T 99 (363)
T 3ovg_A 20 LGITDCHDHFIKNGGPEVEEHIDFLMLNVDASIKEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMST 99 (363)
T ss_dssp CCEEEEEECSCBCSSHHHHHCGGGCBCCHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEE
T ss_pred CCCceeccceeccCChhhccCCcccccCHHHHHHHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeC
Confidence 346788999843 1 01 12344333 45577999988876532 25677788888874 2 588999
Q ss_pred eecC
Q 035377 62 GVHP 65 (66)
Q Consensus 62 GiHP 65 (66)
|+|.
T Consensus 100 G~y~ 103 (363)
T 3ovg_A 100 GFHK 103 (363)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 9873
No 188
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=61.22 E-value=26 Score=21.57 Aligned_cols=34 Identities=15% Similarity=0.049 Sum_probs=24.2
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
+.++++...+.|+.++++.|++ .++..++++.+.
T Consensus 31 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v 71 (313)
T 3dz1_A 31 IDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFI 71 (313)
T ss_dssp HHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHH
Confidence 5677888888999999888874 445555555543
No 189
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=61.03 E-value=15 Score=22.50 Aligned_cols=36 Identities=14% Similarity=0.068 Sum_probs=26.5
Q ss_pred CCHHHHHHHHHhcC--CcEEEeeccChhhHHHHHHHHH
Q 035377 17 HKAPQLIATTVNSG--VLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 17 ~~~~~~~~~~~~~g--v~~~~~~~~~~~~~~~~~~l~~ 52 (66)
++..+.++++.+.| |-+++++..+.+|..+++++..
T Consensus 176 ~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~ 213 (276)
T 3o1n_A 176 EEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATV 213 (276)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCChHHHHHHHHHHH
Confidence 34556667777766 5688888888999888877654
No 190
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=60.82 E-value=26 Score=21.46 Aligned_cols=35 Identities=14% Similarity=0.262 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~ 53 (66)
..++++...+.|+.++++.|++ .++..++++.+.+
T Consensus 34 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~ 75 (303)
T 2wkj_A 34 LRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAE 75 (303)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHH
Confidence 5677888888999999988874 4455555555443
No 191
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=60.68 E-value=11 Score=22.78 Aligned_cols=36 Identities=19% Similarity=0.118 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHhcC--CcEEEeeccChhhHHHHHHHHH
Q 035377 17 HKAPQLIATTVNSG--VLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 17 ~~~~~~~~~~~~~g--v~~~~~~~~~~~~~~~~~~l~~ 52 (66)
++..+.++++.+.| |-++.++..+.+|...++++..
T Consensus 156 ~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll~~~~ 193 (257)
T 2yr1_A 156 ETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATE 193 (257)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHHHHHH
Confidence 34566777888877 5688888888888888777654
No 192
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=60.67 E-value=23 Score=21.73 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=24.1
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 35 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~ 75 (306)
T 1o5k_A 35 YERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTL 75 (306)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHH
Confidence 5577888888999999888873 445555555544
No 193
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=60.52 E-value=19 Score=19.72 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=23.5
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccC-hhhHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVS-EEDWNLVK 48 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~-~~~~~~~~ 48 (66)
..+...++++++++.|+.-.++.+.. .+..+..+
T Consensus 69 ~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l 103 (187)
T 2wm8_A 69 LYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLL 103 (187)
T ss_dssp CCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHH
T ss_pred cchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHH
Confidence 34678899999999999876666554 34444443
No 194
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=59.96 E-value=19 Score=20.42 Aligned_cols=46 Identities=7% Similarity=0.053 Sum_probs=24.4
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
.++.++.+.+.|++.+.+-+...+......+..++++ ....+.++|
T Consensus 73 ~~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g-~~i~~~~~~ 118 (220)
T 2fli_A 73 PERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAG-MKAGVVINP 118 (220)
T ss_dssp GGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTT-SEEEEEECT
T ss_pred HHHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcC-CcEEEEEcC
Confidence 3334577777788776554433345555555555543 333444443
No 195
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=59.89 E-value=24 Score=21.49 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=24.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 30 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~ 70 (297)
T 3flu_A 30 LRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVV 70 (297)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHH
Confidence 5677788888999999988874 344555555443
No 196
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=59.74 E-value=26 Score=21.03 Aligned_cols=37 Identities=16% Similarity=0.003 Sum_probs=19.9
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCe
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSV 57 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i 57 (66)
+...++.+.+.|+--.+ -+.......+.++++++|++
T Consensus 124 ~~~~~~~~~~~glpv~i--h~~~~~l~~l~~ll~~~P~l 160 (303)
T 4do7_A 124 FARGVAWLQANDYVYDV--LVFERQLPDVQAFCARHDAH 160 (303)
T ss_dssp HHHHHHHHHHTTCEEEE--CCCGGGHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHHCCCeEEE--ecCHHHHHHHHHHHHHCCCC
Confidence 34556666666654332 23344455566666666653
No 197
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=59.63 E-value=8 Score=25.35 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=22.4
Q ss_pred HHHHHHHH----hcCCcEEEeeccChhhHHHHHHHHH
Q 035377 20 PQLIATTV----NSGVLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 20 ~~~~~~~~----~~gv~~~~~~~~~~~~~~~~~~l~~ 52 (66)
+.+++.+. +.|..++++.+|.+++...+.+...
T Consensus 157 ~~V~~~a~~~~~~~g~~GvV~gat~~~e~~~ir~~~~ 193 (453)
T 3qw4_B 157 EAVAERAEGPWNVNGNVGLVVGATDPVALARVRARAP 193 (453)
T ss_dssp HHHHHHHTTTTCTTSCEEEEECTTCHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHhhcCCeEEEECCCCHHHHHHHHHhCC
Confidence 45666665 4688888777788888776665443
No 198
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=59.59 E-value=14 Score=22.89 Aligned_cols=17 Identities=6% Similarity=0.186 Sum_probs=8.0
Q ss_pred CHHHHHHHHHhcCCcEE
Q 035377 18 KAPQLIATTVNSGVLHF 34 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~ 34 (66)
+++++++-+.++||+++
T Consensus 223 Nf~~I~~i~l~aGv~~v 239 (275)
T 3m6y_A 223 NFETIVRIALEANVEQV 239 (275)
T ss_dssp THHHHHHHHHHTTCSCB
T ss_pred HHHHHHHHHHHcCCCee
Confidence 34444444444444443
No 199
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=59.53 E-value=28 Score=21.37 Aligned_cols=36 Identities=11% Similarity=0.013 Sum_probs=25.9
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~~ 54 (66)
+.++++...+.||.++++.|++ .++-.++++.+.+.
T Consensus 37 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~ 79 (307)
T 3s5o_A 37 LEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQA 79 (307)
T ss_dssp HHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHH
Confidence 5567788888999999988863 45555666665553
No 200
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=59.44 E-value=28 Score=21.39 Aligned_cols=42 Identities=5% Similarity=0.024 Sum_probs=25.2
Q ss_pred HHHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhCCCeEeeee
Q 035377 19 APQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
..+++.++.++|.. +++ ++.++++.+++.+++++. ++...+|
T Consensus 102 h~~~~~~al~aGk~-Vl~EKP~a~~~~ea~~l~~~a~~~-g~~~~v~ 146 (350)
T 3rc1_A 102 HAEWIDRALRAGKH-VLAEKPLTTDRPQAERLFAVARER-GLLLMEN 146 (350)
T ss_dssp HHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHHHHCCCc-EEEeCCCCCCHHHHHHHHHHHHHh-CCEEEEE
Confidence 44556666667743 333 356777777777777775 3444444
No 201
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=59.34 E-value=13 Score=22.11 Aligned_cols=33 Identities=21% Similarity=0.173 Sum_probs=23.8
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS 51 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~ 51 (66)
++..+++|++.||+.+++.+++=+.-.++++..
T Consensus 40 l~la~era~e~~Ik~iVVASssG~TA~k~~e~~ 72 (206)
T 1t57_A 40 LELVGERADQLGIRNFVVASVSGETALRLSEMV 72 (206)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHc
Confidence 445567888999999988887766666655533
No 202
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=59.01 E-value=22 Score=21.69 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 23 l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~ 63 (297)
T 2rfg_A 23 LAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVA 63 (297)
T ss_dssp HHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHH
Confidence 5677788888999999888863 444555555443
No 203
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=58.96 E-value=22 Score=21.92 Aligned_cols=35 Identities=3% Similarity=0.112 Sum_probs=24.7
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~ 53 (66)
+.++++...+.|+.++++.|++ .++-.++++.+.+
T Consensus 31 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~ 72 (309)
T 3fkr_A 31 QKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILE 72 (309)
T ss_dssp HHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHH
Confidence 5677888888999999988874 4455555555443
No 204
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=58.88 E-value=22 Score=21.93 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.||.++++.|++ .++..++++.+.
T Consensus 46 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v 86 (314)
T 3qze_A 46 LAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVV 86 (314)
T ss_dssp HHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHH
Confidence 5677788888999999988874 344555555443
No 205
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=58.58 E-value=11 Score=25.93 Aligned_cols=37 Identities=14% Similarity=0.004 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
+.+-+++|.++||+.++.+|.+.+|-+ +++.+.++.-
T Consensus 545 F~D~v~~A~~aGV~aIiQPGGSiRD~e-vI~aane~gi 581 (593)
T 1g8m_A 545 FRDNVDRAKRIGVQFIVAPSGSAADEV-VIEACNELGI 581 (593)
T ss_dssp STHHHHHHHTTTEEEEEEECCCTTHHH-HHHHHHHHTC
T ss_pred CchhHHHHHHhCCeEEECCCCCcCCHH-HHHHHHHcCC
Confidence 456788999999999999999988876 4666777754
No 206
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=58.51 E-value=24 Score=20.21 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=20.9
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeec
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
+-|+|... ..++++++.+.+.+++.+++.|
T Consensus 11 iSDlH~~~------~~~~~~l~~~~~~~~D~vi~~G 40 (260)
T 2yvt_A 11 IKNFKERF------DLLPKLKGVIAEKQPDILVVVG 40 (260)
T ss_dssp EECCTTCG------GGHHHHHHHHHHHCCSEEEEES
T ss_pred EeecCCCh------HHHHHHHHHHHhcCCCEEEECC
Confidence 45777432 2367888888777888888777
No 207
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=58.43 E-value=23 Score=21.49 Aligned_cols=34 Identities=24% Similarity=0.223 Sum_probs=23.5
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~ 64 (292)
T 2ojp_A 24 LKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTL 64 (292)
T ss_dssp HHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHH
Confidence 5577788888899999888874 344555555443
No 208
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=58.26 E-value=31 Score=21.49 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~ 53 (66)
+.++++...+.|+.++++.|++ .++..++++.+.+
T Consensus 57 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve 98 (332)
T 2r8w_A 57 FSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAAT 98 (332)
T ss_dssp HHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 5677888888999999988874 4455555555443
No 209
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=58.19 E-value=23 Score=21.87 Aligned_cols=35 Identities=23% Similarity=0.436 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~ 53 (66)
+.++++...+.|+.++++.|++ .++..++++.+.+
T Consensus 47 l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~ 88 (315)
T 3na8_A 47 LGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLK 88 (315)
T ss_dssp HHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 5677888888999999988874 3455555555443
No 210
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=58.17 E-value=22 Score=19.70 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=23.4
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
..+...+++++.++.|+.-.++.+......+..+
T Consensus 87 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l 120 (225)
T 1nnl_A 87 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA 120 (225)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Confidence 4567899999999999986666554444444433
No 211
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=58.06 E-value=22 Score=20.39 Aligned_cols=34 Identities=24% Similarity=0.135 Sum_probs=22.4
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~ 52 (66)
..+.+++++++|+.-+++.|.+......+.+..+
T Consensus 27 ~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~ 60 (266)
T 3pdw_A 27 ACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLV 60 (266)
T ss_dssp HHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 4577889999999988887744444444443333
No 212
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=57.95 E-value=29 Score=21.16 Aligned_cols=34 Identities=15% Similarity=0.279 Sum_probs=23.4
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
+.++++...+.|+.++++.|++ .++..++++.+.
T Consensus 30 l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~ 70 (301)
T 3m5v_A 30 YARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAV 70 (301)
T ss_dssp HHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHH
Confidence 5677788888999999888874 344455555443
No 213
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=57.94 E-value=26 Score=21.69 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~ 53 (66)
+.++++...+.|+.++++.|++ .++..++++.+.+
T Consensus 34 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~ 75 (318)
T 3qfe_A 34 QERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARK 75 (318)
T ss_dssp HHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHH
Confidence 5677888888999999988874 4455555555443
No 214
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=57.67 E-value=36 Score=23.03 Aligned_cols=45 Identities=11% Similarity=0.130 Sum_probs=29.3
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH---hCCCeEeeeee
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE---RHPSVIPCFGV 63 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~---~~~~i~~~~Gi 63 (66)
+.+++++..++.||+.++++|.+ .++..+..|++ ++..=.+.+|+
T Consensus 154 ~~~~~~~~l~~~~Id~LvvIGGd-gS~~~A~~L~e~~~~~~~~i~vIGi 201 (555)
T 2f48_A 154 HYNKALFVAKENNLNAIIIIGGD-DSNTNAAILAEYFKKNGENIQVIGV 201 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEESH-HHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC-cHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 46688888999999999999853 45555555544 33322355554
No 215
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=57.64 E-value=27 Score=21.45 Aligned_cols=36 Identities=19% Similarity=0.133 Sum_probs=27.0
Q ss_pred HHHHHHHHHhcCCcEEEeecc--ChhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAVNGV--SEEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~--~~~~~~~~~~l~~~~ 54 (66)
..++++++-+.|++.+++.+. ..++..++.+.++++
T Consensus 84 ~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~ 121 (305)
T 2fp4_A 84 AAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQ 121 (305)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhc
Confidence 567888899999998665543 445556888999887
No 216
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=57.57 E-value=22 Score=21.02 Aligned_cols=35 Identities=11% Similarity=0.243 Sum_probs=26.3
Q ss_pred HHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 21 QLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 21 ~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
+-++++.+.|++++++-+...++-+.+.+++++|+
T Consensus 88 e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g 122 (243)
T 4gj1_A 88 EEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFG 122 (243)
T ss_dssp HHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEEccccccCCchHHHHHhccc
Confidence 34566778899998776667777777778888775
No 217
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=57.16 E-value=29 Score=21.09 Aligned_cols=34 Identities=12% Similarity=0.164 Sum_probs=23.4
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 25 l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~ 65 (292)
T 3daq_A 25 LKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVI 65 (292)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHH
Confidence 5567788888999999888874 344445555443
No 218
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=57.12 E-value=9.9 Score=22.60 Aligned_cols=37 Identities=8% Similarity=-0.030 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHhcC--CcEEEeeccChhhHHHHHHHHHh
Q 035377 17 HKAPQLIATTVNSG--VLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 17 ~~~~~~~~~~~~~g--v~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
++..+.++++.+.| |-++.++..+.+|...++++..+
T Consensus 142 ~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~ 180 (238)
T 1sfl_A 142 DELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMST 180 (238)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 34566677888777 56888888888888887776543
No 219
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=56.95 E-value=20 Score=22.41 Aligned_cols=42 Identities=29% Similarity=0.422 Sum_probs=29.8
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeee
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGV 63 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~Gi 63 (66)
+.++.++..++.||+.++++|-+ .++..+.+|++ +. .+.+|+
T Consensus 81 ~~~~~~~~l~~~~Id~L~~IGGd-gS~~~a~~l~~-~~--i~vigi 122 (319)
T 4a3s_A 81 GREKGIANLKKLGIEGLVVIGGD-GSYMGAKKLTE-HG--FPCVGV 122 (319)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECT-THHHHHHHHHH-TT--CCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCc-HHHHHHHHHhc-cC--CcEEEe
Confidence 45678888999999999999965 55666666665 32 245554
No 220
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=56.78 E-value=25 Score=21.70 Aligned_cols=35 Identities=11% Similarity=0.055 Sum_probs=24.2
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~ 53 (66)
+.++++...+.||.++++.|++ .++..++++.+.+
T Consensus 35 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~ 76 (316)
T 3e96_A 35 YKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVE 76 (316)
T ss_dssp HHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHH
Confidence 5677788888999999888874 4455555555443
No 221
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=56.71 E-value=41 Score=22.40 Aligned_cols=50 Identities=16% Similarity=0.180 Sum_probs=32.3
Q ss_pred eeccCCCCC--------cCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 5 DAHCHLQDP--------RIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 5 DsH~Hl~~~--------~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
|-+|||+.. .-++.+..+.+.+.+++|.-|++|.- +....-.+|++..|+
T Consensus 270 Dg~CHL~~~~~Y~~s~~~DYPSv~ql~~~l~e~nI~~IFAVt~--~~~~~Y~~L~~~ip~ 327 (472)
T 3t3p_B 270 DGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTE--NVVNLYQNYSELIPG 327 (472)
T ss_dssp CCCCCBCTTCBBTTTTTSCCCCHHHHHHHHHHTTCEEEEEECG--GGHHHHHHHHHTSTT
T ss_pred CCceEECCCCcccccccCCCCCHHHHHHHHHhcCccEEEEEec--cchhHHHHHHHhCCC
Confidence 778999742 11356889999999999988877753 233333344444444
No 222
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=56.57 E-value=21 Score=20.87 Aligned_cols=35 Identities=14% Similarity=0.132 Sum_probs=23.7
Q ss_pred cCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 14 RIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 14 ~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
...++..+++++.++.|+.-.++.+.+....+..+
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l 164 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF 164 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH
Confidence 34578899999999999876655554444444433
No 223
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=56.45 E-value=26 Score=21.69 Aligned_cols=34 Identities=9% Similarity=0.203 Sum_probs=24.1
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
+.++++...+.||.++++.|++ .++-.++++.+.
T Consensus 45 l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v 85 (315)
T 3si9_A 45 FCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCV 85 (315)
T ss_dssp HHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHH
Confidence 5677788888999999988874 444555555544
No 224
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=56.33 E-value=31 Score=20.99 Aligned_cols=15 Identities=20% Similarity=0.136 Sum_probs=7.3
Q ss_pred ChhhHHHHHHHHHhC
Q 035377 40 SEEDWNLVKDMSERH 54 (66)
Q Consensus 40 ~~~~~~~~~~l~~~~ 54 (66)
+.++.+++++++++.
T Consensus 130 ~~~ea~~l~~~a~~~ 144 (393)
T 4fb5_A 130 AYADAERMLATAERS 144 (393)
T ss_dssp SHHHHHHHHHHHHHS
T ss_pred cHHHHHHhhhhHHhc
Confidence 444455555555443
No 225
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=56.32 E-value=27 Score=21.53 Aligned_cols=35 Identities=11% Similarity=0.160 Sum_probs=19.3
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhCC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~~ 55 (66)
.+++.++.++|. .+++ ++.++++.+++.+++++..
T Consensus 101 ~~~~~~al~aGk-~Vl~EKPla~~~~e~~~l~~~a~~~g 138 (357)
T 3ec7_A 101 ADVAVAALNANK-YVFCEKPLAVTAADCQRVIEAEQKNG 138 (357)
T ss_dssp HHHHHHHHHTTC-EEEEESSSCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCC-CEEeecCccCCHHHHHHHHHHHHHhC
Confidence 444555556663 2333 3556666666666666653
No 226
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=56.27 E-value=20 Score=21.78 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=23.7
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~ 64 (291)
T 3tak_A 24 LEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEII 64 (291)
T ss_dssp HHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHH
Confidence 5567778888999999988875 344445555443
No 227
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=56.16 E-value=25 Score=21.64 Aligned_cols=36 Identities=11% Similarity=0.124 Sum_probs=26.0
Q ss_pred CHHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHh
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~ 53 (66)
...++++...+.|+.++++.|++ .++..++++.+.+
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~ 71 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQK 71 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 36778888889999999988874 4455556665544
No 228
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=55.99 E-value=15 Score=22.43 Aligned_cols=33 Identities=6% Similarity=0.149 Sum_probs=17.9
Q ss_pred HHHHHHHHHhcCCcEEEee--ccChhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVN--GVSEEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~--~~~~~~~~~~~~l~~~ 53 (66)
+..+.+.|.+.|+ .+-+ |.++++++++++.+-.
T Consensus 176 ~~avAka~a~~g~--~lEPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 176 FEAVAKACAAHDF--WLEPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp HHHHHHHHHHTTC--EEEEBSSCCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCc--eECCCCCccHhhHHHHHHHHHH
Confidence 4445555556666 3333 3466666666665543
No 229
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=55.82 E-value=25 Score=22.01 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=24.1
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.||.++++.|++ .++..++++.+.
T Consensus 54 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~v 94 (343)
T 2v9d_A 54 TAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAI 94 (343)
T ss_dssp HHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHH
Confidence 5677888888999999888874 345555555444
No 230
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=55.79 E-value=28 Score=21.48 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=23.8
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 35 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~ 75 (314)
T 3d0c_A 35 LDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVT 75 (314)
T ss_dssp HHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHH
Confidence 5577788888999999888763 445555555544
No 231
>3iac_A Glucuronate isomerase; IDP02065, structural genom center for structural genomics of infectious diseases, CSGI; 2.22A {Salmonella typhimurium} SCOP: c.1.9.0
Probab=55.29 E-value=37 Score=22.64 Aligned_cols=47 Identities=11% Similarity=0.037 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHhc-CCcEEEeeccChhhHHHHHHHHHhCCC------eEeeeee
Q 035377 17 HKAPQLIATTVNS-GVLHFAVNGVSEEDWNLVKDMSERHPS------VIPCFGV 63 (66)
Q Consensus 17 ~~~~~~~~~~~~~-gv~~~~~~~~~~~~~~~~~~l~~~~~~------i~~~~Gi 63 (66)
..+..++.+..+. ++.+.|+-+.++.+++.+.-++..||+ |..+.|+
T Consensus 333 ~~L~~lLd~~~~~~~LpktILy~Lnp~~n~~latlag~F~~~~~~gkvq~G~~W 386 (473)
T 3iac_A 333 WALSRLLDSMDVTNELPKTILYCLNPRDNEVLATMIGNFQGPGIAGKVQFGSGW 386 (473)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEESSGGGHHHHHHHGGGSCCTTSTTSEEECCCC
T ss_pred HHHHHHHHhCcccCCCCeeeEEeCCccchHHHHHHHhhcCCCCcCceeEecCcc
Confidence 3466778777765 476888888899999999999999998 8776665
No 232
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=55.19 E-value=22 Score=22.37 Aligned_cols=36 Identities=8% Similarity=0.001 Sum_probs=25.9
Q ss_pred HHHHHHHHhcCCcEEEeecc--ChhhHHHHHHHHHhCC
Q 035377 20 PQLIATTVNSGVLHFAVNGV--SEEDWNLVKDMSERHP 55 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~--~~~~~~~~~~l~~~~~ 55 (66)
+.+++.+.+.|++.+++++. ..++.+++.++++++.
T Consensus 94 ~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~~~g 131 (334)
T 3mwd_B 94 DSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKG 131 (334)
T ss_dssp HHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 55667777799998877654 4456677888888763
No 233
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=55.15 E-value=35 Score=21.57 Aligned_cols=34 Identities=9% Similarity=0.039 Sum_probs=18.4
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
.+++.+|.++|.. +++ ++.++++.+++.+++++.
T Consensus 124 ~~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~~~a~~~ 160 (417)
T 3v5n_A 124 YAAAKEFLKRGIH-VICDKPLTSTLADAKKLKKAADES 160 (417)
T ss_dssp HHHHHHHHTTTCE-EEEESSSCSSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCe-EEEECCCcCCHHHHHHHHHHHHHc
Confidence 4445555555532 322 345666666666666664
No 234
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=54.96 E-value=34 Score=20.95 Aligned_cols=49 Identities=8% Similarity=0.161 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccC---hhhHHHHHHHHHhCC--CeEeeeeecC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVS---EEDWNLVKDMSERHP--SVIPCFGVHP 65 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~---~~~~~~~~~l~~~~~--~i~~~~GiHP 65 (66)
.|..+-++...+.|+++++..|.. .+....+.+|.++.. .|.+..|+-|
T Consensus 128 ~d~~~ale~L~~lG~~rILTSG~~~~a~~g~~~L~~Lv~~a~~i~Im~GgGv~~ 181 (256)
T 1twd_A 128 ANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAHRDAPIIMAGAGVRA 181 (256)
T ss_dssp SCHHHHHHHHHHHTCCEEEECTTSSSTTTTHHHHHHHHTSSSCCEEEEESSCCT
T ss_pred CCHHHHHHHHHHcCCCEEECCCCCCCHHHHHHHHHHHHHhhCCcEEEecCCcCH
Confidence 577888888889999999987643 344566666666433 3667777754
No 235
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=54.47 E-value=25 Score=21.38 Aligned_cols=34 Identities=12% Similarity=0.271 Sum_probs=23.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 23 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~ 63 (292)
T 2vc6_A 23 LHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITI 63 (292)
T ss_dssp HHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHH
Confidence 5577788888899998887763 344555555443
No 236
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=54.43 E-value=30 Score=21.29 Aligned_cols=34 Identities=6% Similarity=0.120 Sum_probs=18.2
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
.+++.+|.++|. .+++ ++.++++.+++.+++++.
T Consensus 79 ~~~~~~al~aGk-hVl~EKP~a~~~~ea~~l~~~a~~~ 115 (362)
T 3fhl_A 79 YEYAGMALEAGK-NVVVEKPFTSTTKQGEELIALAKKK 115 (362)
T ss_dssp HHHHHHHHHTTC-EEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC-eEEEecCCCCCHHHHHHHHHHHHHc
Confidence 344555555563 2333 355666666666666654
No 237
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=54.40 E-value=12 Score=24.18 Aligned_cols=18 Identities=17% Similarity=0.159 Sum_probs=15.3
Q ss_pred HHHHHHHhCCC---eEeeeee
Q 035377 46 LVKDMSERHPS---VIPCFGV 63 (66)
Q Consensus 46 ~~~~l~~~~~~---i~~~~Gi 63 (66)
.++++|+++|+ ||+++|+
T Consensus 129 DAl~iA~~nP~k~VVFfaiGF 149 (372)
T 2z1d_A 129 DTYRIAKENPDKTVVHFSPGF 149 (372)
T ss_dssp HHHHHHHHCTTSEEEEEEEEC
T ss_pred HHHHHHHHCCCCeEEEEeeCh
Confidence 57889999985 8999996
No 238
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=54.28 E-value=37 Score=21.24 Aligned_cols=17 Identities=18% Similarity=0.350 Sum_probs=9.9
Q ss_pred ccChhhHHHHHHHHHhC
Q 035377 38 GVSEEDWNLVKDMSERH 54 (66)
Q Consensus 38 ~~~~~~~~~~~~l~~~~ 54 (66)
+.++++.+++.+++++.
T Consensus 119 a~~~~ea~~l~~~a~~~ 135 (398)
T 3dty_A 119 CFTVEQAENLRELSHKH 135 (398)
T ss_dssp CSCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHc
Confidence 44556666666666654
No 239
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=54.17 E-value=34 Score=20.80 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=32.0
Q ss_pred HHHHHHHHhcCCcEE-EeeccCh-hhHHHHHHHHHhCCCeEeeeeecC
Q 035377 20 PQLIATTVNSGVLHF-AVNGVSE-EDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~-~~~~~~~-~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
.+.++.+.++|+..+ +..|-+. -+-++++++++++. + +.+|+-|
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~~~~~i~~a~~~g-i-~~~~~~~ 279 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVDREAVIAAADDLG-L-FVLGVDP 279 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETTHHHHHHHHHHHT-C-EEEEECC
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeCHHHHHHHHHHcC-C-EEEEeCC
Confidence 678999999999996 5777765 34577889999874 3 3445544
No 240
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=53.55 E-value=20 Score=21.57 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=25.1
Q ss_pred CHHHHHHHHHhcC--CcEEEeeccChhhHHHHHHHHH
Q 035377 18 KAPQLIATTVNSG--VLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 18 ~~~~~~~~~~~~g--v~~~~~~~~~~~~~~~~~~l~~ 52 (66)
++.+.+.++.+.| |-++.+...+.+|..+++++..
T Consensus 157 el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~~~~ 193 (258)
T 4h3d_A 157 EIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATN 193 (258)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHHHHH
Confidence 4556677888776 6678777778888877766543
No 241
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=53.40 E-value=36 Score=22.86 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=26.2
Q ss_pred eeccCCCCCc--------CCCCHHHHHHHHHhcCCcEEEeecc
Q 035377 5 DAHCHLQDPR--------IFHKAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 5 DsH~Hl~~~~--------~~~~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
|-+|||+... -++.+..+.+...+++|.-|++|..
T Consensus 289 Dg~CHL~~~~~Yt~s~~~DYPSv~ql~~kL~ennI~~IFAVt~ 331 (503)
T 3v4v_B 289 DGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPIFAVTS 331 (503)
T ss_dssp CSSCCBCTTSBBGGGGGSCCCCHHHHHHHHHHHTEEEEEEECS
T ss_pred CCCeEECCCCccccccccCCCCHHHHHHHHHhcCCeEEEEEcc
Confidence 7789997421 2356889999999999988777653
No 242
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=53.31 E-value=32 Score=21.63 Aligned_cols=32 Identities=9% Similarity=-0.030 Sum_probs=23.3
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDM 50 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l 50 (66)
+.++++...+.||.++++.|++ .++..++++.
T Consensus 49 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~ 87 (344)
T 2hmc_A 49 LVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER 87 (344)
T ss_dssp HHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH
Confidence 5677888888999999888863 4455555555
No 243
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=52.94 E-value=11 Score=23.60 Aligned_cols=48 Identities=8% Similarity=0.054 Sum_probs=33.5
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccCh------hhHHHHHHHHHhC-CCeEeeeeecC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSE------EDWNLVKDMSERH-PSVIPCFGVHP 65 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~------~~~~~~~~l~~~~-~~i~~~~GiHP 65 (66)
+++.+++.+++++||..++ .|-.+ .++..+.+|.+++ ++.+.++...|
T Consensus 104 ~ei~~~L~~~~~~GI~niL-RGDpp~~~~~~~~~~~A~~l~~~~~~~F~IGvA~yP 158 (315)
T 3ijd_A 104 DEFRRLTRPVSGQDAFSVF-VGAASRNQSVLLKLSDAYKIRQDVNPDLLLGGVAIP 158 (315)
T ss_dssp HHHHHHHSCCTTCCCEEEE-ECCCC----CCSCHHHHHHHHHHHCTTSEEEEEECG
T ss_pred HHHHHHHHHHHHcCCcEEe-cCCCCCCCCCCcCHHHHHHHHHhcCCCEEEEEEECC
Confidence 4577888899999998865 66422 2477788888875 45555655555
No 244
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=52.94 E-value=34 Score=20.36 Aligned_cols=38 Identities=11% Similarity=0.141 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
.+.+.+++.+.++|.+.+.+-.-..+...+.++..+++
T Consensus 79 ~~p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~ 116 (237)
T 3cu2_A 79 RNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQ 116 (237)
T ss_dssp SCHHHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTC
T ss_pred ECHHHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhc
Confidence 46788888888888887655444445566777776665
No 245
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=52.55 E-value=16 Score=20.99 Aligned_cols=54 Identities=13% Similarity=0.061 Sum_probs=29.4
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHH---hc--CCcEEEeeccChh----hHHHHH----HHHHhCCCeEeeeeec
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTV---NS--GVLHFAVNGVSEE----DWNLVK----DMSERHPSVIPCFGVH 64 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~---~~--gv~~~~~~~~~~~----~~~~~~----~l~~~~~~i~~~~GiH 64 (66)
+-|+|-.+ ..++++++++. .. +++.+++.|- +- +..+++ ++.+.. .++...|=|
T Consensus 7 isD~H~~~------~~l~~~l~~~~~~~~~~~~~d~ii~~GD-~~~~g~~~~~~~~~l~~l~~~~-~~~~v~GNh 73 (252)
T 1nnw_A 7 LANIAGNL------PALTAALSRIEEMREEGYEIEKYYILGN-IVGLFPYPKEVIEVIKDLTKKE-NVKIIRGKY 73 (252)
T ss_dssp EECCTTCH------HHHHHHHHHHHHHHHTTCCEEEEEEESC-SSSSSSCHHHHHHHHHHHHHHS-CEEEECCHH
T ss_pred EeecCCCH------HHHHHHHHHHHhhhhccCCCCEEEEeCc-cCCCCCCHHHHHHHHHhhHhhc-CeeEEecch
Confidence 45787432 23567777766 65 6777877773 21 122333 333323 477776754
No 246
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=52.39 E-value=24 Score=21.50 Aligned_cols=37 Identities=8% Similarity=-0.023 Sum_probs=27.6
Q ss_pred HHHHHHHHHhcCCcEEEeecc--ChhhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFAVNGV--SEEDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~--~~~~~~~~~~l~~~~~ 55 (66)
..++++++.+.|+..+++.+. ..++.+++.+.+++++
T Consensus 77 ~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~g 115 (288)
T 1oi7_A 77 AADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALG 115 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcC
Confidence 567888999999987665543 4566678888888764
No 247
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=51.80 E-value=29 Score=19.87 Aligned_cols=30 Identities=10% Similarity=0.046 Sum_probs=21.1
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHH
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLV 47 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~ 47 (66)
...+.++++++.|+.-+++.|........+
T Consensus 28 ~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~ 57 (268)
T 3qgm_A 28 EGVEGVKKLKELGKKIIFVSNNSTRSRRIL 57 (268)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSSSCHHHH
T ss_pred CHHHHHHHHHHcCCeEEEEeCcCCCCHHHH
Confidence 467889999999998888777433433333
No 248
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=51.63 E-value=44 Score=21.29 Aligned_cols=34 Identities=12% Similarity=0.208 Sum_probs=23.8
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
++++++...+.||.++++.|++ .++-.++++.+.
T Consensus 82 l~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~v 122 (360)
T 4dpp_A 82 YDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTV 122 (360)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHH
Confidence 5677888888999999988874 344445555433
No 249
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=51.47 E-value=15 Score=22.33 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=21.7
Q ss_pred HHHHHHHHHhcCCcEEE-eeccChhhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFA-VNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~-~~~~~~~~~~~~~~l~~~~~ 55 (66)
..+.+..+.++|+.-++ .+|.+.+..+++.+++++.|
T Consensus 86 ~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~~~~ 123 (272)
T 4f3y_A 86 TLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIA 123 (272)
T ss_dssp HHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTTTSE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhccCC
Confidence 34556677778876433 23335555666777776644
No 250
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=51.19 E-value=39 Score=20.50 Aligned_cols=34 Identities=3% Similarity=0.012 Sum_probs=17.8
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
.+++.++.++|.. +++ ++.++++.+++.+++++.
T Consensus 81 ~~~~~~al~~gk~-vl~EKP~~~~~~e~~~l~~~a~~~ 117 (330)
T 3e9m_A 81 YSAAKLALSQGKP-VLLEKPFTLNAAEAEELFAIAQEQ 117 (330)
T ss_dssp HHHHHHHHHTTCC-EEECSSCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCe-EEEeCCCCCCHHHHHHHHHHHHHc
Confidence 3444455555532 322 345566666666666654
No 251
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=51.01 E-value=7.8 Score=22.57 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=30.3
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccCh---hhHHHHHHHHHhCCCeEeeeeec
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSE---EDWNLVKDMSERHPSVIPCFGVH 64 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~---~~~~~~~~l~~~~~~i~~~~GiH 64 (66)
+-|+|..+ ..++++++.+. +.+.+++.|--. .+..+++++.++.+.++...|-|
T Consensus 9 isDiHg~~------~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~~~~~v~GNh 65 (246)
T 3rqz_A 9 ISDVHANL------VALEAVLSDAG--RVDDIWSLGDIVGYGPRPRECVELVRVLAPNISVIGNH 65 (246)
T ss_dssp ECCCTTCH------HHHHHHHHHHC--SCSEEEECSCCSSSSSCHHHHHHHHHHHCSSEECCCHH
T ss_pred EeecCCCH------HHHHHHHHhcc--CCCEEEECCCcCCCCCCHHHHHHHHHhcCCCEEEeCch
Confidence 34777332 23566777665 778888777311 13445555555544456666655
No 252
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=50.95 E-value=29 Score=18.95 Aligned_cols=39 Identities=13% Similarity=0.183 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
++++.++++..+..++++++ -++.+.=-...++....|+
T Consensus 73 ~eVdkm~~k~~q~~~dGl~i-YCDdeNk~~m~Ki~~~lP~ 111 (126)
T 2rbg_A 73 NEVDIFLKNLEKSEVDGLLV-YCDDENKVFMSKIVDNLPT 111 (126)
T ss_dssp GGHHHHHHHHTTCCCCEEEE-EECGGGHHHHHHHHHTSCH
T ss_pred HHHHHHHHHHHHhCCCceEE-EeCCCchhHHHHHHHhccH
Confidence 67999999999999999865 4565655556667776664
No 253
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=50.78 E-value=33 Score=19.65 Aligned_cols=18 Identities=11% Similarity=0.213 Sum_probs=10.4
Q ss_pred HHHHHHHHHhcCCcEEEe
Q 035377 19 APQLIATTVNSGVLHFAV 36 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~ 36 (66)
..+.++.|.+.|...+++
T Consensus 87 ~~~~i~~a~~lG~~~v~~ 104 (272)
T 2q02_A 87 TEGLLRDAQGVGARALVL 104 (272)
T ss_dssp HHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHhCCCEEEE
Confidence 445556666666665543
No 254
>3of4_A Nitroreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; HET: FMN UNL FAD; 1.90A {Idiomarina loihiensis} SCOP: d.90.1.0
Probab=50.77 E-value=14 Score=21.05 Aligned_cols=45 Identities=7% Similarity=0.145 Sum_probs=33.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH-hC-CCeEeeeee
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE-RH-PSVIPCFGV 63 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~-~~-~~i~~~~Gi 63 (66)
...++-.|.+.|+..+..-|.+.+...+.+.+-+ .+ +-...++|+
T Consensus 139 ~~nl~LaA~~~Glgsc~i~g~~~~~v~~~L~lp~~~~~~~~~ialGy 185 (209)
T 3of4_A 139 LGTFLLAAAELEVDSCPMEGIEHDAYDNILSLKDLGLSTVFACPVGY 185 (209)
T ss_dssp HHHHHHHHHHTTCEECCBCCSCHHHHHHHTTHHHHTEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCeeeecccCHHHHHHHhCCCCCCceEEEEEEeec
Confidence 3456667889999988877888888888888876 33 335567775
No 255
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=50.68 E-value=38 Score=20.85 Aligned_cols=35 Identities=11% Similarity=0.205 Sum_probs=20.8
Q ss_pred HHHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
..+++.+|.++|. .+++ ++.+.++.+++.+++++.
T Consensus 78 H~~~~~~al~aGk-hVl~EKPla~~~~e~~~l~~~a~~~ 115 (358)
T 3gdo_A 78 HYEHTMACIQAGK-HVVMEKPMTATAEEGETLKRAADEK 115 (358)
T ss_dssp HHHHHHHHHHTTC-EEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-eEEEecCCcCCHHHHHHHHHHHHHc
Confidence 4455666666663 3333 355677777777777664
No 256
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=50.56 E-value=30 Score=20.00 Aligned_cols=19 Identities=11% Similarity=0.226 Sum_probs=9.2
Q ss_pred HHHHHHHHhcCCcEEEeec
Q 035377 20 PQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~ 38 (66)
++.++.+.+.|.+.+.+-+
T Consensus 77 ~~~i~~~~~agad~v~vH~ 95 (228)
T 1h1y_A 77 SDYVEPLAKAGASGFTFHI 95 (228)
T ss_dssp GGGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 3345555555555544433
No 257
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=50.21 E-value=34 Score=20.80 Aligned_cols=35 Identities=3% Similarity=-0.053 Sum_probs=18.7
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhCC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~~ 55 (66)
.+++.++.++|. .+++ ++.++++.+++.+++++..
T Consensus 80 ~~~~~~al~~Gk-~vl~EKP~a~~~~e~~~l~~~a~~~g 117 (344)
T 3mz0_A 80 ESSVLKAIKAQK-YVFCEKPLATTAEGCMRIVEEEIKVG 117 (344)
T ss_dssp HHHHHHHHHTTC-EEEECSCSCSSHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCC-cEEEcCCCCCCHHHHHHHHHHHHHHC
Confidence 444555555663 2332 2456666666666666543
No 258
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=50.12 E-value=34 Score=19.60 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHhcCCcEEEeecc--ChhhHHHHHHHHHhC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGV--SEEDWNLVKDMSERH 54 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~--~~~~~~~~~~l~~~~ 54 (66)
.+.++.++.+.+.|++.+.+-+. ..+...+..+..+++
T Consensus 78 nd~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~ 117 (230)
T 1rpx_A 78 VEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSL 117 (230)
T ss_dssp SSHHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHc
Confidence 34566777778888887755554 334445555555554
No 259
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=50.03 E-value=29 Score=20.21 Aligned_cols=46 Identities=13% Similarity=0.050 Sum_probs=28.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-----------hhhHHHHHHHHHhCCC-eEeeeeec
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-----------EEDWNLVKDMSERHPS-VIPCFGVH 64 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-----------~~~~~~~~~l~~~~~~-i~~~~GiH 64 (66)
++++++.+.+.+.+.++..|-- .+.++.+.++.++.+. ++...|=|
T Consensus 40 l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~v~GNH 97 (322)
T 2nxf_A 40 LRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNH 97 (322)
T ss_dssp HHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHTTCSEEEECCCHH
T ss_pred HHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHHHhcCCcEEEecCCC
Confidence 5566666666778888777731 2334456666555443 77777755
No 260
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=49.92 E-value=39 Score=20.14 Aligned_cols=48 Identities=4% Similarity=-0.107 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHhcCCcEEEeecc----Ch-------hhHHHHHHHHHhCCCeEeeeeec
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGV----SE-------EDWNLVKDMSERHPSVIPCFGVH 64 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~----~~-------~~~~~~~~l~~~~~~i~~~~GiH 64 (66)
.++++.++.+++.|++.+=+... .+ +..+++.++.+++.--..+++.|
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~ 73 (340)
T 2zds_A 15 LPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNH 73 (340)
T ss_dssp SCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CCHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEeecc
Confidence 47899999999999998654431 22 23567778888875433444554
No 261
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=49.71 E-value=36 Score=20.64 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=16.7
Q ss_pred HHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 21 QLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 21 ~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
+++.+|.++|.. +++ ++.+.++.+++.+++++.
T Consensus 87 ~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~~~a~~~ 122 (312)
T 3o9z_A 87 PQIRMALRLGAN-ALSEKPLVLWPEEIARLKELEART 122 (312)
T ss_dssp HHHHHHHHTTCE-EEECSSSCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCe-EEEECCCCCCHHHHHHHHHHHHHc
Confidence 344445555522 222 244566666666666654
No 262
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=49.12 E-value=39 Score=19.89 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=26.0
Q ss_pred HHHHHHhcCCcEEEeecc---ChhhHHHHHHHHHhCCCeEeeeeec
Q 035377 22 LIATTVNSGVLHFAVNGV---SEEDWNLVKDMSERHPSVIPCFGVH 64 (66)
Q Consensus 22 ~~~~~~~~gv~~~~~~~~---~~~~~~~~~~l~~~~~~i~~~~GiH 64 (66)
-++++.+.|++.+++.++ +++...+..+.+++. ++...+.+|
T Consensus 93 ~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~-g~~v~~~v~ 137 (232)
T 3igs_A 93 DVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH-HLLTMADCS 137 (232)
T ss_dssp HHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-TCEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC-CCEEEEeCC
Confidence 456778889887765544 356667777777665 444444443
No 263
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=49.06 E-value=39 Score=21.33 Aligned_cols=15 Identities=13% Similarity=0.158 Sum_probs=8.0
Q ss_pred CHHHHHHHHHhcCCc
Q 035377 18 KAPQLIATTVNSGVL 32 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~ 32 (66)
+.+++++.|+++|+.
T Consensus 107 ea~~l~~~A~~~g~~ 121 (372)
T 4gmf_A 107 DISSLQTLAQEQGCC 121 (372)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCE
Confidence 344555555555553
No 264
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=48.95 E-value=22 Score=21.88 Aligned_cols=37 Identities=11% Similarity=0.215 Sum_probs=23.3
Q ss_pred HHHHHHHHHhcCCcEEE-eeccChhhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFA-VNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~-~~~~~~~~~~~~~~l~~~~~ 55 (66)
..+.+..+.++|+.-++ .+|.+.+..+++.+++++-|
T Consensus 101 ~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~~~~ 138 (288)
T 3ijp_A 101 SVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAKYTT 138 (288)
T ss_dssp HHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhCcCC
Confidence 34556777888886443 23445566667777777644
No 265
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=48.93 E-value=28 Score=21.81 Aligned_cols=35 Identities=11% Similarity=0.097 Sum_probs=28.2
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
+.+++++..++.||+.++++|- -.++.-+.+|++.
T Consensus 81 ~~~~~~~~l~~~~Id~LvvIGG-dgS~~~a~~L~~~ 115 (319)
T 1zxx_A 81 GQLAGIEQLKKHGIDAVVVIGG-DGSYHGALQLTRH 115 (319)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC-HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEEECC-chHHHHHHHHHHh
Confidence 4677888899999999999985 4777777777764
No 266
>2kqv_A Non-structural protein 3; severe acute respiratory syndrome (SARS), nonstructural PROT macrodomains, RNA-binding proteins, structural genomics; NMR {Sars coronavirus} PDB: 2kqw_A
Probab=48.76 E-value=27 Score=20.50 Aligned_cols=40 Identities=5% Similarity=-0.061 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEee
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPC 60 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 60 (66)
-++.+++++|++.|.. +.++++..-+-+.+ .+++|.+.+.
T Consensus 9 ~n~r~ml~~ak~~g~~--~~ic~D~~A~~k~l--k~~~kgv~~~ 48 (198)
T 2kqv_A 9 WNLREMLAHAEETRKL--MPICMDVRAIMATI--QRKYKGIKIQ 48 (198)
T ss_dssp CCHHHHHHHHHHSCCB--CEEETTCHHHHHHH--HHHCCSCCCC
T ss_pred eeHHHHHHHhhhcCeE--EEEEeccHHHHHHH--hhhccCcccc
Confidence 3689999999999874 34456666554443 3456665543
No 267
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=48.65 E-value=36 Score=24.04 Aligned_cols=46 Identities=13% Similarity=0.149 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHH---HhCCC-eEeeeee
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS---ERHPS-VIPCFGV 63 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~---~~~~~-i~~~~Gi 63 (66)
++.+++++..++.||+.++++|-+ .++.-+.+|+ ++++. -.+.+|+
T Consensus 476 ~~~~~~~~~l~~~~Id~LvvIGGd-gS~~~a~~L~~~~~~~~~~~i~vvgi 525 (762)
T 3o8l_A 476 KSFEQISANITKFNIQGLVIIGGF-EAYTGGLELMEGRKQFDELCIPFVVI 525 (762)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEESH-HHHHHHHHHHHHHHHCSTTCSCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCc-hHHHHHHHHHHHHHhccccCCCEEee
Confidence 467889999999999999999964 5555555554 34553 2355665
No 268
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=48.41 E-value=42 Score=20.25 Aligned_cols=41 Identities=17% Similarity=0.296 Sum_probs=21.0
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhCCCeEeee
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERHPSVIPCF 61 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~~~i~~~~ 61 (66)
.+++.++.++|. .+++ ++.+.++.+++.+++++.|++...+
T Consensus 85 ~~~~~~al~~G~-~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~ 128 (346)
T 3cea_A 85 PEMTIYAMNAGL-NVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQS 128 (346)
T ss_dssp HHHHHHHHHTTC-EEEECSCCCSCHHHHHHHHHHHHTCTTSCEEC
T ss_pred HHHHHHHHHCCC-EEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEE
Confidence 344555555663 2222 2345666666666666653433333
No 269
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=48.31 E-value=40 Score=19.84 Aligned_cols=35 Identities=9% Similarity=0.027 Sum_probs=24.1
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKD 49 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ 49 (66)
..+...+++++.++.|+.-.++.+......+..++
T Consensus 164 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~ 198 (287)
T 3a1c_A 164 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISR 198 (287)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 45678899999999999866665555444444433
No 270
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=47.98 E-value=29 Score=18.08 Aligned_cols=38 Identities=5% Similarity=0.076 Sum_probs=27.4
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhh------------HHHHHHHHHhCC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEED------------WNLVKDMSERHP 55 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~------------~~~~~~l~~~~~ 55 (66)
...+.++++++.|+.-+++.|-.... .++++++.++++
T Consensus 28 ~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~~~~~i~~~~~~~~ 77 (126)
T 1xpj_A 28 DVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQ 77 (126)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCeEEEEeCCChhhccccccccCHHHHHHHHHHHHHcC
Confidence 46678899999999877777654433 467777777754
No 271
>2w2g_A Non-structural protein 3; thiol protease, RNA replication, viral replicase, RNA-binding, zinc-finger, ribosomal frameshifting, hydrolase; 2.22A {Sars coronavirus} PDB: 2wct_A 2jwi_A 2jwj_A 2jzf_A 2rnk_A 2jzd_A 2jze_A
Probab=47.93 E-value=44 Score=20.34 Aligned_cols=39 Identities=3% Similarity=-0.073 Sum_probs=25.7
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEee
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPC 60 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 60 (66)
++.+++++|++.|. .+.++++..-+-+.+ .++|+.+.+.
T Consensus 144 n~r~Ml~~AK~~Gl--~~piC~D~~A~~ktL--Kr~~kgv~~~ 182 (264)
T 2w2g_A 144 NLREMLAHAEETRK--LMPICMDVRAIMATI--QRKYKGIKIQ 182 (264)
T ss_dssp CHHHHHHHHHHHCC--EEEEETTCHHHHHHH--HHHTTTCCCC
T ss_pred hHHHHHHHhhhcCe--EEEEEeccHHHHHHH--hhhccCcccc
Confidence 58899999999987 444566666555444 3456655543
No 272
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=47.87 E-value=46 Score=20.36 Aligned_cols=34 Identities=12% Similarity=0.033 Sum_probs=18.2
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
.+++.++.++|. .+++ ++.++++.+++.+++++.
T Consensus 79 ~~~~~~al~aGk-~Vl~EKP~a~~~~e~~~l~~~a~~~ 115 (349)
T 3i23_A 79 YDLAKQAILAGK-SVIVEKPFCDTLEHAEELFALGQEK 115 (349)
T ss_dssp HHHHHHHHHTTC-EEEECSCSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCC-EEEEECCCcCCHHHHHHHHHHHHHc
Confidence 345555555663 2332 245566666666666664
No 273
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=47.47 E-value=34 Score=20.77 Aligned_cols=13 Identities=23% Similarity=0.194 Sum_probs=6.3
Q ss_pred HHHHHHHHHhcCC
Q 035377 19 APQLIATTVNSGV 31 (66)
Q Consensus 19 ~~~~~~~~~~~gv 31 (66)
.+++++.+++.|+
T Consensus 126 a~~l~~~a~~~~~ 138 (350)
T 4had_A 126 IDAVIAARDRNKV 138 (350)
T ss_dssp GHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 4445555555544
No 274
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=47.46 E-value=22 Score=21.75 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~~ 53 (66)
..++++...+.||.++++.|++ .++..++++.+.+
T Consensus 27 l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~ 68 (300)
T 3eb2_A 27 MGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIE 68 (300)
T ss_dssp HHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHH
Confidence 5677788888999999888774 4445555554433
No 275
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=47.25 E-value=41 Score=19.67 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~ 52 (66)
.+.++.+.+.+++++++.+.+.+.....++.+.
T Consensus 48 ~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 80 (313)
T 3m9w_A 48 MSQIENMINRGVDVLVIIPYNGQVLSNVVKEAK 80 (313)
T ss_dssp HHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHH
Confidence 356677777888888887776665444444443
No 276
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=47.13 E-value=42 Score=19.72 Aligned_cols=42 Identities=10% Similarity=0.070 Sum_probs=25.8
Q ss_pred HHHHHHhcCCcEEEeecc---ChhhHHHHHHHHHhCCCeEeeeeec
Q 035377 22 LIATTVNSGVLHFAVNGV---SEEDWNLVKDMSERHPSVIPCFGVH 64 (66)
Q Consensus 22 ~~~~~~~~gv~~~~~~~~---~~~~~~~~~~l~~~~~~i~~~~GiH 64 (66)
-++++.+.|++.+++.++ +++...+..+.+++. ++...+.+|
T Consensus 93 ~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~-g~~v~~~v~ 137 (229)
T 3q58_A 93 DVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH-GLLAMADCS 137 (229)
T ss_dssp HHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-TCEEEEECS
T ss_pred HHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC-CCEEEEecC
Confidence 456778888887665544 355666677766664 444444444
No 277
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=47.06 E-value=27 Score=18.90 Aligned_cols=37 Identities=5% Similarity=-0.111 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
+...++++++.+.|++.+++..... .+++.++++++.
T Consensus 81 ~~v~~v~~~~~~~g~~~i~i~~~~~--~~~l~~~a~~~G 117 (145)
T 2duw_A 81 EAAWGVAQEAIAIGAKTLWLQLGVI--NEQAAVLAREAG 117 (145)
T ss_dssp THHHHHHHHHHHHTCCEEECCTTCC--CHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCChH--HHHHHHHHHHcC
Confidence 3467888888889998876543222 566777787764
No 278
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=46.69 E-value=47 Score=20.14 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=24.0
Q ss_pred HHHHHHHHHh-cCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVN-SGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~-~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+ .|+.++++.|++ .++..++++.+.
T Consensus 26 l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~ 67 (293)
T 1f6k_A 26 LRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAK 67 (293)
T ss_dssp HHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHH
Confidence 5677888888 999999888874 445555555544
No 279
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=46.47 E-value=58 Score=21.19 Aligned_cols=34 Identities=18% Similarity=0.156 Sum_probs=26.0
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~ 52 (66)
..+++++..++.||+.++++|-+ .++..+..|++
T Consensus 92 ~~~~~~~~l~~~~Id~Lv~IGGd-gS~~~A~~L~~ 125 (419)
T 3hno_A 92 EYERLIEVFKAHDIGYFFYNGGG-DSADTCLKVSQ 125 (419)
T ss_dssp HHHHHHHHHHHTTEEEEEEEESH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCc-hHHHHHHHHHH
Confidence 46678888999999999999964 55665666654
No 280
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=46.45 E-value=52 Score=20.61 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=27.9
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
..+++++..++.||+.++++|- -.++.-+.+|++.
T Consensus 82 ~~~~~~~~l~~~~Id~LvvIGG-dgS~~~a~~L~~~ 116 (320)
T 1pfk_A 82 IRAVAIENLKKRGIDALVVIGG-DGSYMGAMRLTEM 116 (320)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC-HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEECC-CchHHHHHHHHhh
Confidence 3577888899999999999984 4677777777764
No 281
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=46.41 E-value=47 Score=20.43 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=18.4
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
.+++.++.++|. .+++ ++.+.++.+++.+++++.
T Consensus 79 ~~~~~~al~aGk-hVl~EKP~a~~~~ea~~l~~~a~~~ 115 (359)
T 3e18_A 79 KELAISALEAGK-HVVCEKPVTMTSEDLLAIMDVAKRV 115 (359)
T ss_dssp HHHHHHHHHTTC-EEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC-CEEeeCCCcCCHHHHHHHHHHHHHh
Confidence 344455555563 2333 355666666666666654
No 282
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=46.28 E-value=49 Score=20.24 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=24.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
+.++++...+.|+.++++.|++ .++..++++.+.
T Consensus 39 l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~ 79 (304)
T 3cpr_A 39 GREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVR 79 (304)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHH
Confidence 5677888888999999888874 444555555544
No 283
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=46.11 E-value=41 Score=19.35 Aligned_cols=30 Identities=3% Similarity=-0.173 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHH
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKD 49 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ 49 (66)
.+.++.+.+.+++++++.+.+.+.....++
T Consensus 59 ~~~i~~l~~~~vdgiii~~~~~~~~~~~~~ 88 (304)
T 3gbv_A 59 VATSQAVIEEQPDGVMFAPTVPQYTKGFTD 88 (304)
T ss_dssp HHHHHHHHTTCCSEEEECCSSGGGTHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCChHHHHHHHH
Confidence 456777888899999888877655444444
No 284
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=46.07 E-value=47 Score=20.01 Aligned_cols=35 Identities=11% Similarity=0.083 Sum_probs=19.4
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhCC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~~ 55 (66)
.+++.++.++|. .+++ ++.++++.+++.+++++..
T Consensus 77 ~~~~~~al~~gk-~v~~EKP~~~~~~~~~~l~~~a~~~g 114 (331)
T 4hkt_A 77 ADLIERFARAGK-AIFCEKPIDLDAERVRACLKVVSDTK 114 (331)
T ss_dssp HHHHHHHHHTTC-EEEECSCSCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCC-cEEEecCCCCCHHHHHHHHHHHHHcC
Confidence 445555556663 2332 3556666666666666653
No 285
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=45.98 E-value=48 Score=20.06 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 23 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~ 63 (289)
T 2yxg_A 23 LEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVV 63 (289)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHH
Confidence 5677788888999999888864 344555555444
No 286
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=45.86 E-value=46 Score=19.88 Aligned_cols=21 Identities=19% Similarity=0.175 Sum_probs=17.3
Q ss_pred CCCHHHHHHHHHhcCCcEEEe
Q 035377 16 FHKAPQLIATTVNSGVLHFAV 36 (66)
Q Consensus 16 ~~~~~~~~~~~~~~gv~~~~~ 36 (66)
..|.+++++++-+.|++.+++
T Consensus 125 ~~d~~~Ll~e~i~~G~~aiiv 145 (237)
T 3rjz_A 125 GRDAKEYMRELLNLGFKIMVV 145 (237)
T ss_dssp SCCHHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHCCCEEEEE
Confidence 357899999999999997553
No 287
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=45.84 E-value=28 Score=18.16 Aligned_cols=21 Identities=19% Similarity=0.306 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHhcCCcEEEee
Q 035377 17 HKAPQLIATTVNSGVLHFAVN 37 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~ 37 (66)
+++++.++++.+.|+++++++
T Consensus 48 P~l~~~l~~l~~~G~~~vvvv 68 (126)
T 3lyh_A 48 PSLDTIVNRAKGQGVEQFTVV 68 (126)
T ss_dssp SBHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEE
Confidence 578999999999999987665
No 288
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=45.80 E-value=36 Score=18.59 Aligned_cols=26 Identities=8% Similarity=0.129 Sum_probs=19.6
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccC
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVS 40 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~ 40 (66)
..+...+++++.++.|+.-.++.+..
T Consensus 35 ~~~g~~~~L~~L~~~g~~~~i~Tn~~ 60 (189)
T 3ib6_A 35 LRKNAKETLEKVKQLGFKQAILSNTA 60 (189)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCS
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCC
Confidence 45678899999999998766555443
No 289
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=45.72 E-value=32 Score=19.38 Aligned_cols=35 Identities=9% Similarity=0.033 Sum_probs=23.9
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKD 49 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ 49 (66)
..+...+++++.++.|+.-.++.+......+..++
T Consensus 78 ~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~ 112 (236)
T 2fea_A 78 IREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE 112 (236)
T ss_dssp BCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT
T ss_pred CCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh
Confidence 45678899999999998866665554443444443
No 290
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=45.67 E-value=49 Score=20.07 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=23.2
Q ss_pred HHHHHHHHHhcCCcEEEeeccC-------hhhHHHHHHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVS-------EEDWNLVKDMSE 52 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~-------~~~~~~~~~l~~ 52 (66)
..++++...+.|+.++++.|++ .++..++++.+.
T Consensus 23 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~ 63 (294)
T 2ehh_A 23 LGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAV 63 (294)
T ss_dssp HHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHH
Confidence 5677788888899998888864 344455555444
No 291
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=45.51 E-value=42 Score=19.52 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=21.1
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHH
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS 51 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~ 51 (66)
.+.++++.+.+++++++.+.+.+.....++.+
T Consensus 51 ~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~ 82 (297)
T 3rot_A 51 VQFIESALATYPSGIATTIPSDTAFSKSLQRA 82 (297)
T ss_dssp HHHHHHHHHTCCSEEEECCCCSSTTHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHH
Confidence 35677777888998887776665444444433
No 292
>3kdf_A Replication protein A 14 kDa subunit; wheat GERM cell free, protein complex, center for eukaryotic structural genomics, PSI; HET: MSE; 1.98A {Homo sapiens} SCOP: b.40.4.3 PDB: 1quq_B 1l1o_A
Probab=45.50 E-value=10 Score=20.50 Aligned_cols=21 Identities=14% Similarity=0.200 Sum_probs=17.7
Q ss_pred cChhhHHHHHHHHHhCCCeEe
Q 035377 39 VSEEDWNLVKDMSERHPSVIP 59 (66)
Q Consensus 39 ~~~~~~~~~~~l~~~~~~i~~ 59 (66)
.+.+.+.++.+++.++|.+|+
T Consensus 94 fD~~~yn~lv~l~~~~~~lf~ 114 (121)
T 3kdf_A 94 FDLGLYNEAVKIIHDFPQFYP 114 (121)
T ss_dssp CCHHHHHHHHHHHHHCGGGSC
T ss_pred cCHHHHHHHHHHHhcCCcccc
Confidence 357788999999999998775
No 293
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=45.46 E-value=52 Score=20.37 Aligned_cols=48 Identities=6% Similarity=0.068 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
++++ -+++|.++|.+.+++=..++++.+++.+..+..-.+..+=|+-|
T Consensus 206 ~tl~-ea~eAl~aGaD~I~LDn~~~~~l~~av~~~~~~v~ieaSGGIt~ 253 (287)
T 3tqv_A 206 TNLD-ELNQAIAAKADIVMLDNFSGEDIDIAVSIARGKVALEVSGNIDR 253 (287)
T ss_dssp SSHH-HHHHHHHTTCSEEEEESCCHHHHHHHHHHHTTTCEEEEESSCCT
T ss_pred CCHH-HHHHHHHcCCCEEEEcCCCHHHHHHHHHhhcCCceEEEECCCCH
Confidence 3453 34556667888777666778888887777654333556666654
No 294
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=45.32 E-value=32 Score=21.85 Aligned_cols=23 Identities=9% Similarity=0.027 Sum_probs=19.3
Q ss_pred CCHHHHHHHHHhcCCcEEEeecc
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
+.+++.++++++.|+++++++-.
T Consensus 109 P~i~d~l~~l~~~G~~~ivvlPl 131 (362)
T 1lbq_A 109 PLTAETYKQMLKDGVKKAVAFSQ 131 (362)
T ss_dssp SCHHHHHHHHHTTTCCEEEEEES
T ss_pred CCHHHHHHHHHHcCCCeEEEEec
Confidence 46899999999999999876644
No 295
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=45.26 E-value=49 Score=19.99 Aligned_cols=42 Identities=10% Similarity=0.014 Sum_probs=23.8
Q ss_pred HHHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhCCCeEeeee
Q 035377 19 APQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
..+++.++.++|.. +++ ++.++++.+++.+++++.. +...+|
T Consensus 80 h~~~~~~al~aGk~-Vl~EKP~a~~~~e~~~l~~~a~~~~-~~~~v~ 124 (329)
T 3evn_A 80 HYKVAKAALLAGKH-VLVEKPFTLTYDQANELFALAESCN-LFLMEA 124 (329)
T ss_dssp HHHHHHHHHHTTCE-EEEESSCCSSHHHHHHHHHHHHHTT-CCEEEE
T ss_pred HHHHHHHHHHCCCe-EEEccCCcCCHHHHHHHHHHHHHcC-CEEEEE
Confidence 34555566666643 333 3556777777777777653 333444
No 296
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=45.17 E-value=52 Score=20.28 Aligned_cols=16 Identities=6% Similarity=0.038 Sum_probs=8.5
Q ss_pred ccChhhHHHHHHHHHh
Q 035377 38 GVSEEDWNLVKDMSER 53 (66)
Q Consensus 38 ~~~~~~~~~~~~l~~~ 53 (66)
+.+.++.+++.+++++
T Consensus 122 a~~~~ea~~l~~~a~~ 137 (361)
T 3u3x_A 122 MTSFDQLAKLRRVQAE 137 (361)
T ss_dssp CSSHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHH
Confidence 3455555555555554
No 297
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=44.94 E-value=29 Score=17.33 Aligned_cols=30 Identities=13% Similarity=0.047 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHH
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNL 46 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~ 46 (66)
+...++++++++.|+.-.++.+......+.
T Consensus 21 ~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~ 50 (137)
T 2pr7_A 21 RRWRNLLAAAKKNGVGTVILSNDPGGLGAA 50 (137)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSCCGGGGH
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 346788999999998766665544444333
No 298
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=44.89 E-value=44 Score=19.31 Aligned_cols=39 Identities=23% Similarity=0.165 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHhcCCcEEEeecc----------ChhhHHHHHHHHHhCC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGV----------SEEDWNLVKDMSERHP 55 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~----------~~~~~~~~~~l~~~~~ 55 (66)
.++++.++.+++.|++.+=+... +.++.+++.++++++.
T Consensus 12 ~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 60 (287)
T 2x7v_A 12 KGFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHG 60 (287)
T ss_dssp TCGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcC
Confidence 36888999999999987644321 2245667777777764
No 299
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=44.88 E-value=62 Score=21.03 Aligned_cols=25 Identities=8% Similarity=0.080 Sum_probs=12.8
Q ss_pred ccChhhHHHHHHHHHhCCCeEeeee
Q 035377 38 GVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 38 ~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
+.++++.+++.+++++...+...+|
T Consensus 148 a~~~~ea~~l~~~a~~~g~~~~~v~ 172 (479)
T 2nvw_A 148 AASVQQAEELYSISQQRANLQTIIC 172 (479)
T ss_dssp SSSHHHHHHHHHHHHTCTTCEEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 4455666666666655431334444
No 300
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=44.84 E-value=44 Score=19.36 Aligned_cols=33 Identities=3% Similarity=0.073 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~ 52 (66)
.+.++.+.+.+++++++.+.+.+.....++.+.
T Consensus 51 ~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 83 (305)
T 3g1w_A 51 ITVLEQAIAKNPAGIAISAIDPVELTDTINKAV 83 (305)
T ss_dssp HHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHH
Confidence 356677777889988887776654444444333
No 301
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=44.65 E-value=38 Score=20.54 Aligned_cols=38 Identities=11% Similarity=0.179 Sum_probs=25.3
Q ss_pred CHHHHHHHHHhcCCcEEEeeccCh---hhHHHHHHHHHhCC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSE---EDWNLVKDMSERHP 55 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~---~~~~~~~~l~~~~~ 55 (66)
++.++++.+.+.|+..+...|..| .++.++++.+++.+
T Consensus 54 ~i~~~i~~~~~~g~~~i~~tGGEPll~~~l~~li~~~~~~~ 94 (340)
T 1tv8_A 54 EMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQID 94 (340)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSCGGGSTTHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCccchhhHHHHHHHHHhCC
Confidence 345566677778888887777665 45666666666554
No 302
>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp}
Probab=44.55 E-value=33 Score=17.74 Aligned_cols=38 Identities=8% Similarity=0.042 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
...+++.+++.|+..+.+.....+++..+..+.++...
T Consensus 116 l~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf 153 (177)
T 2r7h_A 116 LAEVVHDVRLTGGRLLFAETSGIRKYAPTRRFYERAGF 153 (177)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECSGGGHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCEEEEEeccccccHHHHHHHHHcCC
Confidence 55677788888988776544334666777888887654
No 303
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=44.40 E-value=52 Score=20.07 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=17.6
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
.+++.+|.++|. .+++ ++.+.++.+++.+++++.
T Consensus 81 ~~~~~~al~aGk-hV~~EKPla~~~~e~~~l~~~a~~~ 117 (352)
T 3kux_A 81 FPLAQSALAAGK-HVVVDKPFTVTLSQANALKEHADDA 117 (352)
T ss_dssp HHHHHHHHHTTC-EEEECSSCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCC-cEEEECCCcCCHHHHHHHHHHHHHc
Confidence 344555555553 2322 245566666666666654
No 304
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=44.20 E-value=78 Score=21.98 Aligned_cols=35 Identities=9% Similarity=0.133 Sum_probs=25.1
Q ss_pred eeccCCCCCc--------CCCCHHHHHHHHHhcCCcEEEeecc
Q 035377 5 DAHCHLQDPR--------IFHKAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 5 DsH~Hl~~~~--------~~~~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
|-.|||+... -++.+.++.+.+.+++|.-++++..
T Consensus 270 d~~chl~~~~~y~~s~~~DypSi~ql~~~l~~~~i~~ifavt~ 312 (690)
T 3fcs_B 270 DGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTE 312 (690)
T ss_dssp CCCCCBCTTCBBGGGGTSCCCCHHHHHHHHHHTTCEEEEEEEG
T ss_pred CcceeecCCCccccccccCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 6678887321 1245889999999999987776653
No 305
>3qdl_A Oxygen-insensitive NADPH nitroreductase; oxidoreductase; HET: FMN; 2.00A {Helicobacter pylori}
Probab=43.88 E-value=31 Score=19.47 Aligned_cols=44 Identities=11% Similarity=0.089 Sum_probs=29.4
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHH-HhC-CCeEeeeee
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS-ERH-PSVIPCFGV 63 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~-~~~-~~i~~~~Gi 63 (66)
..++-.|.+.|+..+..-|.+.+...+++.+- +.+ +-...++|+
T Consensus 145 ~~~~LaA~~~Glgs~~~~~~~~~~~~~~l~lp~~~~~~~~~i~~Gy 190 (210)
T 3qdl_A 145 GQICMGVSLMGLDSCIIGGFDPLKVGEVLEERINKPKIACLIALGK 190 (210)
T ss_dssp HHHHHHHHHHTCEEEEECCSCHHHHHHHHHTTSCCCEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCceeecccCHHHHHHHhCCCCCCceEEEEEEeec
Confidence 34556778899998888777777777777765 333 124456775
No 306
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=43.81 E-value=36 Score=18.01 Aligned_cols=42 Identities=5% Similarity=-0.008 Sum_probs=30.0
Q ss_pred CHHHHHH----HHHhcCCcEEEeeccChhhHHHHHHHHHhCCC-eEe
Q 035377 18 KAPQLIA----TTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS-VIP 59 (66)
Q Consensus 18 ~~~~~~~----~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~-i~~ 59 (66)
|.+++-. -|.+.+++++++++.+-.-..+.++|..+... +|.
T Consensus 34 dsdelkkemkklaeeknfekiliisndkqllkemlelisklgykvfl 80 (134)
T 2lci_A 34 DSDELKKEMKKLAEEKNFEKILIISNDKQLLKEMLELISKLGYKVFL 80 (134)
T ss_dssp SHHHHHHHHHHHHHCCSCCCEEEEESCHHHHHHHHHHHHHHTCCEEE
T ss_pred chHHHHHHHHHHHhhcCcceEEEEcCcHHHHHHHHHHHHHhCceeEE
Confidence 4454444 44567889999999888888889998877543 554
No 307
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=43.76 E-value=45 Score=19.15 Aligned_cols=33 Identities=9% Similarity=-0.010 Sum_probs=22.0
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~ 52 (66)
.+.++.+.+.+++++++.+.+.+.....++.+.
T Consensus 54 ~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~ 86 (293)
T 3l6u_A 54 REQILEFVHLKVDAIFITTLDDVYIGSAIEEAK 86 (293)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCChHHHHHHHHHHH
Confidence 356777778889998887776665544444433
No 308
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=43.62 E-value=63 Score=21.56 Aligned_cols=46 Identities=4% Similarity=0.010 Sum_probs=30.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
..+.++++++.|++.+|+.+-...+. -.+++++.+++=..+|=|++
T Consensus 183 ~~~~v~~lk~~g~d~iI~l~H~G~~~--d~~la~~~~giDlIlgGHtH 228 (579)
T 3ztv_A 183 AQIMANALKQQGINKIILLSHAGSEK--NIEIAQKVNDIDVIVTGDSH 228 (579)
T ss_dssp HHHHHHHHHTTTCCCEEEEEETCHHH--HHHHHHHCSSCCEEEECSSC
T ss_pred HHHHHHHHHhCCCCEEEEEeccCchh--hHHHHHhCCCCCEEEeCCCC
Confidence 45667778888888777665332222 24678888877667777764
No 309
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=43.54 E-value=25 Score=21.69 Aligned_cols=27 Identities=7% Similarity=0.208 Sum_probs=21.1
Q ss_pred CHHHHH----HHHHhcCCcEEEeeccChhhH
Q 035377 18 KAPQLI----ATTVNSGVLHFAVNGVSEEDW 44 (66)
Q Consensus 18 ~~~~~~----~~~~~~gv~~~~~~~~~~~~~ 44 (66)
+.++++ +.|.++|+.-++|+|-++++-
T Consensus 129 Etde~V~~K~~~Al~~GL~pIlCVGEtleeR 159 (272)
T 4g1k_A 129 ESNETVAAKARRALAAGLTPIVCVGETLAER 159 (272)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCCHHHH
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 345555 788999999999999887654
No 310
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=43.46 E-value=54 Score=23.39 Aligned_cols=33 Identities=9% Similarity=0.001 Sum_probs=24.9
Q ss_pred cCCCCHHHHHHHHHhcCCcEEEeeccChhhHHH
Q 035377 14 RIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNL 46 (66)
Q Consensus 14 ~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~ 46 (66)
+..++..+.+++++++|++-.++.|-+.+....
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ 635 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIA 635 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHH
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHH
Confidence 345789999999999999877777765554433
No 311
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=43.30 E-value=35 Score=20.79 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=18.6
Q ss_pred HHHHHhcCCcEEEeeccChhh
Q 035377 23 IATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~~~~~ 43 (66)
++.|.++|+.-++|+|-++++
T Consensus 114 v~~Al~~GL~pI~CvGEtlee 134 (255)
T 1b9b_A 114 VKAVLEKGMTPILCVGETLEE 134 (255)
T ss_dssp HHHHHHTTCEEEEEECCCHHH
T ss_pred HHHHHHCCCEEEEEcCCcHHH
Confidence 678899999999999988776
No 312
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=43.21 E-value=50 Score=23.73 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=24.0
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWN 45 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~ 45 (66)
..++..+.+++++++||+-.++.|-+++...
T Consensus 600 lr~~~~~aI~~l~~aGI~v~miTGD~~~tA~ 630 (1028)
T 2zxe_A 600 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 630 (1028)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHH
T ss_pred CChhHHHHHHHHHHcCCEEEEECCCCHHHHH
Confidence 4578899999999999987777775555443
No 313
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=43.19 E-value=20 Score=19.95 Aligned_cols=57 Identities=16% Similarity=0.007 Sum_probs=26.8
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh-CCCeEeeeeec
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER-HPSVIPCFGVH 64 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~-~~~i~~~~GiH 64 (66)
+-|+|....... ..+.+.+..++.+++.++..| +.-+. ..++..++ ...++...|=|
T Consensus 16 iSD~H~~~~~~~---~~~~l~~~~~~~~~d~ii~~G-Dl~~~-~~~~~l~~~~~~~~~v~GNh 73 (192)
T 1z2w_A 16 LGDLHIPHRCNS---LPAKFKKLLVPGKIQHILCTG-NLCTK-ESYDYLKTLAGDVHIVRGDF 73 (192)
T ss_dssp ECCCCBTTTCSS---CCHHHHTTCCTTSCSEEEECS-CCBSH-HHHHHHHHHCSEEEECCCTT
T ss_pred EecCCCCccchh---HHHHHHHHhccCCCCEEEEcC-CCCCH-HHHHHHHhcCCCEEEEcCCc
Confidence 347776432211 123333333345678887776 44332 22333232 22466666655
No 314
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=43.18 E-value=55 Score=19.96 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=19.8
Q ss_pred HHHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
..+++.++.++|.. +++ ++.++++.+++.+++++.
T Consensus 79 h~~~~~~al~~gk~-vl~EKP~~~~~~~~~~l~~~a~~~ 116 (354)
T 3db2_A 79 HAEVIEQCARSGKH-IYVEKPISVSLDHAQRIDQVIKET 116 (354)
T ss_dssp HHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCE-EEEccCCCCCHHHHHHHHHHHHHc
Confidence 34455556666632 332 355666777777766664
No 315
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=43.12 E-value=49 Score=19.36 Aligned_cols=16 Identities=13% Similarity=0.181 Sum_probs=6.3
Q ss_pred HHHHHhcCCcEEEeec
Q 035377 23 IATTVNSGVLHFAVNG 38 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~ 38 (66)
++++++.|+.--+++|
T Consensus 105 ~~~l~~~gi~vevIPG 120 (242)
T 1wyz_A 105 VAIAQRQKLKVIPLVG 120 (242)
T ss_dssp HHHHHHTTCCEEECCC
T ss_pred HHHHHHCCCCEEEeCc
Confidence 3333344444333333
No 316
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=43.05 E-value=25 Score=21.51 Aligned_cols=35 Identities=14% Similarity=0.100 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
.+++.+.+++.|+-.++.-|...+..+++.+.+++
T Consensus 23 ~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~ 57 (312)
T 3oox_A 23 AQELGASFERYGFAVLSDYDLDQARIDAAVDSAKA 57 (312)
T ss_dssp HHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45566778888987777778888878877777665
No 317
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=42.93 E-value=36 Score=18.92 Aligned_cols=45 Identities=13% Similarity=0.024 Sum_probs=23.4
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeec
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVH 64 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiH 64 (66)
.+++++++.. .+++.++..| |.-+.+.+..|.+....++...|=|
T Consensus 39 ~l~~~l~~~~-~~~D~ii~~G-D~~~~~~~~~l~~~~~~v~~V~GNh 83 (178)
T 2kkn_A 39 SLPDEILNSL-KEYDGVIGLG-DYVDLDTVILLEKFSKEFYGVHGNM 83 (178)
T ss_dssp CCCHHHHHGG-GGCSEEEESS-CBSCHHHHHHHHHHTSSEEECCCSS
T ss_pred HHHHHHHHHh-cCCCEEEECC-CCCCHHHHHHHHhcCCCEEEEECCC
Confidence 3456666654 5678887777 4433322222222222466666655
No 318
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=42.85 E-value=35 Score=21.73 Aligned_cols=39 Identities=13% Similarity=0.195 Sum_probs=20.7
Q ss_pred HHHHhcCCc------EEEeeccChhhHHHHHHHHHhCCCeEeeee
Q 035377 24 ATTVNSGVL------HFAVNGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 24 ~~~~~~gv~------~~~~~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
+-+++.|++ ++++-+|.+++...+.+....++-+.|.+|
T Consensus 244 ~la~~~G~d~~~~~~GvVvGaTs~~e~~~iR~~~~~~~iLtPGIG 288 (352)
T 2fds_A 244 KMATDLKIDQNNEFIGFVVGSNAFEEMKIIRNKFPDSYILSPGIG 288 (352)
T ss_dssp HHHHHHTTGGGTCCEEEEECTTCHHHHHHHHHHSTTCCEEECCC-
T ss_pred HHHHHhCCCccCCcceEEEcCCCHHHHHHHHHhCCCCEEEcCccc
Confidence 344556663 565555677777766655433333444443
No 319
>3gbh_A NAD(P)H-flavin oxidoreductase; putative NAD(P)H:FMN oxidoreductase, structural genomics, JO center for structural genomics; HET: MSE FMN PGE; 2.00A {Staphylococcus epidermidis atcc 12228} SCOP: d.90.1.0
Probab=42.77 E-value=17 Score=20.50 Aligned_cols=44 Identities=20% Similarity=0.263 Sum_probs=29.6
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHH-HhC-CCeEeeeee
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS-ERH-PSVIPCFGV 63 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~-~~~-~~i~~~~Gi 63 (66)
..++-.|.+.|+..+..-|.+.+...+.+.+- +.+ +-...++|.
T Consensus 148 ~~l~LaA~~~Glgsc~i~~~~~~~v~~~L~lp~~~~~~~~~i~lGy 193 (213)
T 3gbh_A 148 MQLMLTAKAHGYDTNPIGGFDKENIADIIGYDSDRYVPVLAIAIGK 193 (213)
T ss_dssp HHHHHHHHHTTCEEEEECCSCTTTHHHHHTCCTTTEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCeeeecCcCHHHHHHHhCCCccCceEEEEEEecc
Confidence 34556788899998887777777777777664 332 234457774
No 320
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=42.52 E-value=31 Score=16.91 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=17.5
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
..+++.+.+.|+..+ .++.+.+..+.+.++.++
T Consensus 83 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~ 115 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYF-DLTEDVAATNAVRALVED 115 (118)
T ss_dssp HHHHHHHHHTTCEEE-CCCSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCEE-EecCcHHHHHHHHHHHHh
Confidence 445555666665533 344555555555555543
No 321
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=42.43 E-value=46 Score=18.87 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=23.5
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
..+...+++++.++.|+.-.++.+...+..+..+
T Consensus 145 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~ 178 (280)
T 3skx_A 145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA 178 (280)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred CCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 3467889999999999976666555544444433
No 322
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=42.31 E-value=34 Score=21.30 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCcEEEeecc---Chhh-----HHHHHHHHHhCCCeEeeeeecCC
Q 035377 19 APQLIATTVNSGVLHFAVNGV---SEED-----WNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~---~~~~-----~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
..++++++++.|++.+|+.+- ..+. -....+|+++.|+|=.-+|=|++
T Consensus 196 ~~~~v~~Lk~~g~D~II~l~H~G~~~d~~~~~~e~~~~~lA~~v~giD~IigGHsH 251 (341)
T 3gve_A 196 ANETIPKMKAEGADVIIALAHTGIEKQAQSSGAENAVFDLATKTKGIDAIISGHQH 251 (341)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSSCHHHHHHHCSCCCEEEECSSC
T ss_pred HHHHHHHHHhcCCCEEEEEeccCccccccccccchhHHHHHhcCCCCcEEEECCCC
Confidence 456777888889998877642 1111 11245688888887777777753
No 323
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=42.27 E-value=49 Score=19.13 Aligned_cols=39 Identities=8% Similarity=-0.055 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
-++++.++.+++.|++++=+.+....+.+++.++.+++.
T Consensus 23 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~g 61 (269)
T 3ngf_A 23 VPFLERFRLAAEAGFGGVEFLFPYDFDADVIARELKQHN 61 (269)
T ss_dssp SCHHHHHHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCCCEEEecCCccCCHHHHHHHHHHcC
Confidence 379999999999999987554444456777888888874
No 324
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=42.02 E-value=44 Score=19.06 Aligned_cols=32 Identities=19% Similarity=0.082 Sum_probs=22.4
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
+...+.++++++.|+.-+++.|-.........
T Consensus 25 ~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~ 56 (227)
T 1l6r_A 25 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALK 56 (227)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCcHHHHHHH
Confidence 44677889999999987777775555544433
No 325
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=41.95 E-value=46 Score=18.74 Aligned_cols=38 Identities=8% Similarity=0.019 Sum_probs=25.0
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
+..+.++++.+.|+..+-+.-.+++..+.+.+++++++
T Consensus 20 ~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~ 57 (212)
T 2v82_A 20 EALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYG 57 (212)
T ss_dssp HHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCC
Confidence 34566677778899876554445555666667777665
No 326
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=41.76 E-value=57 Score=19.72 Aligned_cols=36 Identities=14% Similarity=0.106 Sum_probs=29.3
Q ss_pred CHHHHHHHHHhcC--CcEEEeeccChhhHHHHHHHHHh
Q 035377 18 KAPQLIATTVNSG--VLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~g--v~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
+..+.++++.+.| |-+++++..+.+|..+++++..+
T Consensus 160 el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~ 197 (259)
T 3l9c_A 160 NLMEVFSELTALAPRVVKIAVMPKNEQDVLDLMNYTRG 197 (259)
T ss_dssp THHHHHHHHHHTCCSEEEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 6888899999877 56888888899998888877653
No 327
>3gfa_A Putative nitroreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE FMN GOL; 1.35A {Clostridium difficile 630}
Probab=41.64 E-value=18 Score=20.01 Aligned_cols=44 Identities=9% Similarity=0.005 Sum_probs=25.9
Q ss_pred HHHHHHHHHhcCCcEEEe--eccChhhHHHHHHHHHhCCCeEeeeee
Q 035377 19 APQLIATTVNSGVLHFAV--NGVSEEDWNLVKDMSERHPSVIPCFGV 63 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~--~~~~~~~~~~~~~l~~~~~~i~~~~Gi 63 (66)
...++-.|.+.|+..+.. .+.+.+...+.+.+-+. +-...++|.
T Consensus 133 ~~nl~LaA~~~Glgs~~~~~~~~~~~~v~~~l~lp~~-~~~~i~lGy 178 (198)
T 3gfa_A 133 IQNMSLTAVELGLGSLWICDVYFAYRELCEWLNTDSQ-LVAAISLGY 178 (198)
T ss_dssp HHHHHHHHHHTTCEEEEECGGGGGHHHHHHHHTCSSE-EEEEEEEEC
T ss_pred HHHHHHHHHHCCCeeeeecCcccCcHHHHHHhCCCcc-eEEEEEEec
Confidence 345566788899998877 34444455555554433 334456664
No 328
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=41.43 E-value=49 Score=20.56 Aligned_cols=50 Identities=14% Similarity=0.019 Sum_probs=29.9
Q ss_pred CCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC-CeEeeee
Q 035377 10 LQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP-SVIPCFG 62 (66)
Q Consensus 10 l~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~-~i~~~~G 62 (66)
|....-.+++.++++++.+.|+..+ ++++.-...+.+..+..+ .|-..+|
T Consensus 67 L~p~~T~~dI~~lc~eA~~~g~aaV---CV~P~~V~~a~~~L~~s~V~V~tVig 117 (288)
T 3oa3_A 67 LSLSATGSQIDVLCAEAKEYGFATV---CVRPDYVSRAVQYLQGTQVGVTCVIG 117 (288)
T ss_dssp CCTTCCHHHHHHHHHHHHHHTCSEE---EECGGGHHHHHHHTTTSSCEEEEEES
T ss_pred CCCCCCHHHHHHHHHHHHhcCCcEE---EECHHHHHHHHHHcCCCCCeEEEEeC
Confidence 4433334578889999999998755 345665555555544333 2444455
No 329
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=41.40 E-value=40 Score=18.59 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=18.8
Q ss_pred CCCHHHHHHHHHhcCCcEEEeeccCh
Q 035377 16 FHKAPQLIATTVNSGVLHFAVNGVSE 41 (66)
Q Consensus 16 ~~~~~~~~~~~~~~gv~~~~~~~~~~ 41 (66)
.+...+++++.++.|+.-.++.+...
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~~~ 119 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTATNS 119 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 45677899999999987666555443
No 330
>2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A*
Probab=41.34 E-value=48 Score=21.89 Aligned_cols=42 Identities=12% Similarity=0.069 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeee
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGV 63 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~Gi 63 (66)
+..++++..+..+-+.+ .++.++..+..++.+||+++...|+
T Consensus 286 L~~ll~~~~~~~lpkti---Ln~~~n~elat~ag~Fpnvq~g~~W 327 (437)
T 2qee_A 286 VEHLLREYPNNKFLVTM---LSRENQHELVVLARKFSNLMIFGCW 327 (437)
T ss_dssp HHHHHHHCTTSCEEEEE---SCGGGHHHHHHHHHHCTTEEEBCCC
T ss_pred HHHHHHhCcccCCCeee---cChhhHHHHHHHHccCCcceecCcc
Confidence 45556665555333333 6889999999999999998876554
No 331
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=41.19 E-value=28 Score=21.51 Aligned_cols=22 Identities=14% Similarity=0.261 Sum_probs=18.5
Q ss_pred HHHHhcCCcEEEeeccChhhHH
Q 035377 24 ATTVNSGVLHFAVNGVSEEDWN 45 (66)
Q Consensus 24 ~~~~~~gv~~~~~~~~~~~~~~ 45 (66)
+.|.++|+.-++|+|-++++-+
T Consensus 139 ~~Al~~GL~pIlCVGEtleeRe 160 (275)
T 3kxq_A 139 QAAWRAGLVALICVGETLEERK 160 (275)
T ss_dssp HHHHHTTCEEEEEECCCHHHHH
T ss_pred HHHHHCCCEEEEEeCCCHHHHH
Confidence 7889999999999998876543
No 332
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=41.14 E-value=62 Score=21.95 Aligned_cols=30 Identities=10% Similarity=0.040 Sum_probs=22.4
Q ss_pred cCCCCHHHHHHHHHhcCCcEEEeeccChhh
Q 035377 14 RIFHKAPQLIATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 14 ~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~ 43 (66)
+..++..+.++++++.|++-.++.|-+.+.
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~ 486 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRS 486 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 346788999999999999866666644433
No 333
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=41.13 E-value=30 Score=20.96 Aligned_cols=21 Identities=33% Similarity=0.333 Sum_probs=18.0
Q ss_pred HHHHHhcCCcEEEeeccChhh
Q 035377 23 IATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~~~~~ 43 (66)
+++|.++|+.-++|+|-++++
T Consensus 113 v~~Al~~GL~pI~CvGEtlee 133 (249)
T 3th6_A 113 IKHALESGLNVIACIGELLED 133 (249)
T ss_dssp HHHHHHTTCEEEEEECCCHHH
T ss_pred HHHHHHCCCEEEEEcCCcHHH
Confidence 488899999999999987764
No 334
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=41.13 E-value=40 Score=17.74 Aligned_cols=28 Identities=11% Similarity=-0.012 Sum_probs=19.0
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNL 46 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~ 46 (66)
..+.+++.++.|+.-.++.+......+.
T Consensus 41 ~~~~l~~l~~~g~~~~i~T~~~~~~~~~ 68 (162)
T 2p9j_A 41 DGIGIKLLQKMGITLAVISGRDSAPLIT 68 (162)
T ss_dssp HHHHHHHHHTTTCEEEEEESCCCHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcHHHHH
Confidence 4578999999998766665554444433
No 335
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=41.13 E-value=59 Score=19.71 Aligned_cols=13 Identities=0% Similarity=-0.077 Sum_probs=6.2
Q ss_pred ccChhhHHHHHHH
Q 035377 38 GVSEEDWNLVKDM 50 (66)
Q Consensus 38 ~~~~~~~~~~~~l 50 (66)
+.+.++.+++.++
T Consensus 109 a~t~~ea~~l~~~ 121 (390)
T 4h3v_A 109 ANTVAEAEAMAAA 121 (390)
T ss_dssp CSSHHHHHHHHHH
T ss_pred ccchhHHHHHHHH
Confidence 3444555555444
No 336
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=40.97 E-value=22 Score=19.80 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=21.3
Q ss_pred CCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHH
Q 035377 9 HLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 9 Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~ 52 (66)
|-..++|...+++++++|-.... ..+||..++++++
T Consensus 7 ~~~~~~~~t~~~~~IekATs~~l--------~~~Dw~~ileicD 42 (152)
T 3rru_A 7 HHSHDPYATSVGHLIEKATFAGV--------QTEDWGQFMHICD 42 (152)
T ss_dssp ----CGGGSHHHHHHHHHTCSSC--------CSCCHHHHHHHHH
T ss_pred ccCCCCCCChHHHHHHHHcCCCC--------CCccHHHHHHHHH
Confidence 33456788889999999976543 2345555555543
No 337
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=40.95 E-value=41 Score=17.87 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=23.3
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
..+...+++++.++.|+.-.++.+...+..+..+
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l 123 (214)
T 3e58_A 90 IFPDVLKVLNEVKSQGLEIGLASSSVKADIFRAL 123 (214)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred cCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHH
Confidence 3467889999999999886666555544444443
No 338
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=40.88 E-value=42 Score=18.01 Aligned_cols=35 Identities=3% Similarity=-0.031 Sum_probs=24.3
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
..++++++.+.|++.+++.. .. ..+++.++++++.
T Consensus 90 ~~~vv~~~~~~gi~~i~~~~-g~-~~~~l~~~a~~~G 124 (144)
T 2d59_A 90 TMEYVEQAIKKGAKVVWFQY-NT-YNREASKKADEAG 124 (144)
T ss_dssp HHHHHHHHHHHTCSEEEECT-TC-CCHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEECC-Cc-hHHHHHHHHHHcC
Confidence 56788888899998765432 22 2567778888764
No 339
>1icr_A Oxygen-insensitive NAD(P)H nitroreductase; alpha-beta, oxidoreductase; HET: FMN; 1.70A {Escherichia coli} SCOP: d.90.1.1 PDB: 1ds7_A* 1icu_A* 1icv_A* 1idt_A* 1oo5_A* 1oo6_A* 1oon_A* 1ooq_A* 1yki_A* 1ylr_A* 1ylu_A* 3hzn_A* 1kqb_A* 1kqc_A* 1kqd_A* 1nec_A*
Probab=40.83 E-value=33 Score=19.10 Aligned_cols=44 Identities=9% Similarity=0.089 Sum_probs=29.6
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHH-HhC-CCeEeeeee
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS-ERH-PSVIPCFGV 63 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~-~~~-~~i~~~~Gi 63 (66)
..++-.|.+.|+..+..-|.+.+...+.+.+- +.+ +-...++|.
T Consensus 148 ~~l~LaA~~~Glgsc~~~~~~~~~v~~~l~lp~~~~~~~~~i~lGy 193 (217)
T 1icr_A 148 GNFLLGVAALGLDAVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGH 193 (217)
T ss_dssp HHHHHHHHHTTCEECCBCCSCHHHHHHHHTHHHHTEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCcccccCcCHHHHHHHhCCCccCCceEEEEEecc
Confidence 44556778899988776666777777777776 443 334457774
No 340
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=40.80 E-value=45 Score=18.29 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=23.0
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
..+...++++++++.|+.-.++.+...+..+..+
T Consensus 104 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l 137 (231)
T 3kzx_A 104 LNDGAIELLDTLKENNITMAIVSNKNGERLRSEI 137 (231)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred ECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH
Confidence 4567889999999999886665554444443333
No 341
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=40.71 E-value=44 Score=19.12 Aligned_cols=37 Identities=5% Similarity=0.001 Sum_probs=17.9
Q ss_pred CHHHHHHHHHhcCCcEEEeecc--ChhhHHHHHHHHHhC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGV--SEEDWNLVKDMSERH 54 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~--~~~~~~~~~~l~~~~ 54 (66)
++++.++.+++.|++++=+... ...+.+++.++.+++
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~ 57 (275)
T 3qc0_A 19 GFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRAN 57 (275)
T ss_dssp CHHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHc
Confidence 5566666666666665433221 123344444444444
No 342
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=40.70 E-value=9.3 Score=24.07 Aligned_cols=8 Identities=63% Similarity=1.364 Sum_probs=5.2
Q ss_pred ceEeeccC
Q 035377 2 KLFDAHCH 9 (66)
Q Consensus 2 ~~iDsH~H 9 (66)
++||-|||
T Consensus 13 ~~id~h~h 20 (376)
T 2qpx_A 13 PLLDHHCH 20 (376)
T ss_dssp CEEEEEEC
T ss_pred CccccCCc
Confidence 46677777
No 343
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=40.55 E-value=51 Score=18.88 Aligned_cols=34 Identities=9% Similarity=-0.186 Sum_probs=22.8
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
.+.++.+.+.+++++++.+.+.+.....++.+.+
T Consensus 51 ~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~ 84 (291)
T 3l49_A 51 VSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKIND 84 (291)
T ss_dssp HHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHH
Confidence 4567777788899988777765555555554443
No 344
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=40.50 E-value=53 Score=18.99 Aligned_cols=34 Identities=12% Similarity=0.050 Sum_probs=24.4
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
.+.++++.+.+++++++.+.+.+.....++.+.+
T Consensus 47 ~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~ 80 (306)
T 8abp_A 47 LNAIDSLAASGAKGFVICTPDPKLGSAIVAKARG 80 (306)
T ss_dssp HHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHHH
Confidence 4567777888999998888777766665554444
No 345
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=40.44 E-value=51 Score=18.91 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHH
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDM 50 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l 50 (66)
+...+.++++++.|+.-+++.+........+.+.
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~ 57 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEM 57 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHH
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence 3456788999999998877774333333333333
No 346
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=40.31 E-value=55 Score=19.22 Aligned_cols=22 Identities=14% Similarity=0.055 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHhcCCcEEEeec
Q 035377 17 HKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
+...++++.+++.|+..++.++
T Consensus 130 ~~~~~~~~~~~~~g~~~i~~~a 151 (262)
T 1rd5_A 130 VAAHSLWSEAKNNNLELVLLTT 151 (262)
T ss_dssp TTHHHHHHHHHHTTCEECEEEC
T ss_pred hhHHHHHHHHHHcCCceEEEEC
Confidence 3577788888888877554443
No 347
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=40.30 E-value=30 Score=20.92 Aligned_cols=36 Identities=8% Similarity=0.069 Sum_probs=28.1
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
..+++.+.+++.|+-.++.=|...+..+++.+.+++
T Consensus 14 ~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~ 49 (280)
T 3on7_A 14 SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQA 49 (280)
T ss_dssp HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 467888899999987777778888877777776654
No 348
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=40.23 E-value=55 Score=20.13 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=16.1
Q ss_pred HHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 22 LIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 22 ~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
++.++.++|.. +++ ++.++++.+++.+++++.
T Consensus 84 ~~~~al~aGkh-Vl~EKPla~~~~e~~~l~~~a~~~ 118 (359)
T 3m2t_A 84 MGLLAMSKGVN-VFVEKPPCATLEELETLIDAARRS 118 (359)
T ss_dssp HHHHHHHTTCE-EEECSCSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCe-EEEECCCcCCHHHHHHHHHHHHHc
Confidence 34444555532 222 244566666666666653
No 349
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=40.20 E-value=44 Score=18.08 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=22.4
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
..+...+++++.++.|+.-.++.+......+..+
T Consensus 76 ~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l 109 (217)
T 3m1y_A 76 LFEGALELVSALKEKNYKVVCFSGGFDLATNHYR 109 (217)
T ss_dssp BCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHH
Confidence 3567889999999999876655554443333333
No 350
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=40.13 E-value=51 Score=19.62 Aligned_cols=42 Identities=17% Similarity=0.165 Sum_probs=26.1
Q ss_pred HHHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhCCCeEeeee
Q 035377 19 APQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
..+++.++.++|.. +++ ++.++++.+++.+++++. ++...+|
T Consensus 79 h~~~~~~al~~gk~-vl~EKP~~~~~~~~~~l~~~a~~~-g~~~~v~ 123 (308)
T 3uuw_A 79 HYEIIKILLNLGVH-VYVDKPLASTVSQGEELIELSTKK-NLNLMVG 123 (308)
T ss_dssp HHHHHHHHHHTTCE-EEECSSSSSSHHHHHHHHHHHHHH-TCCEEEC
T ss_pred HHHHHHHHHHCCCc-EEEcCCCCCCHHHHHHHHHHHHHc-CCEEEEe
Confidence 45566667777754 333 456778888888887775 3444444
No 351
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=39.92 E-value=36 Score=20.62 Aligned_cols=46 Identities=9% Similarity=0.055 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhCCC-eEeeeeecC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERHPS-VIPCFGVHP 65 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~~~-i~~~~GiHP 65 (66)
.+++.++.++|..-+.. .+.+.++.+++.+.+++.+. +..+.|+.|
T Consensus 79 ~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p 128 (304)
T 3bio_A 79 ERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDP 128 (304)
T ss_dssp HHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTT
T ss_pred HHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCH
Confidence 45566777777543321 24456677777777777543 223335554
No 352
>3noj_A 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloac decarboxylase; class II aldolase, A-B-B-A sandwich, metalloprotein, lyase; HET: PG4; 1.82A {Pseudomonas putida}
Probab=39.91 E-value=60 Score=19.44 Aligned_cols=41 Identities=17% Similarity=0.219 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
+-+...|+.+|+.++++-| ..+|...+.++ .+| ..+.|++|
T Consensus 102 ~~la~~a~~~G~aGiVidG-~vRD~~~l~~~--~fP--V~a~g~~p 142 (238)
T 3noj_A 102 DLLATSLQARGVRALIVDA-GVRDTQTLRDM--GFA--VWARAINA 142 (238)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EECCHHHHHHH--TCE--EEEEEECC
T ss_pred HHHHHHHHHCCCcEEEeec-ccCCHHHHHhC--CCC--EEEeecCC
Confidence 3466788899999988777 46777776665 244 34556665
No 353
>3h4o_A Nitroreductase family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE FMN; 1.50A {Clostridium difficile 630} PDB: 3koq_A*
Probab=39.90 E-value=18 Score=20.39 Aligned_cols=45 Identities=11% Similarity=0.086 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC-CCeEeeeee
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH-PSVIPCFGV 63 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~-~~i~~~~Gi 63 (66)
...++-.|.+.|+..+..-+.+.+..++.+.+-+.+ +-...++|.
T Consensus 119 ~~nl~LaA~~lGLgsc~~~~~~~~~v~~~l~lp~~~~~~~~i~lGy 164 (191)
T 3h4o_A 119 TDHMMLQATELGLASVWVCYFNPDIIREEFSLPDNLEPINILLMGY 164 (191)
T ss_dssp HHHHHHHHHHTTCEEEEECCSCHHHHHHHTTCCTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEcccCHHHHHHHhCcCCCceEEEEEEEec
Confidence 456777889999998877676666565555543322 123346664
No 354
>3sxu_A DNA polymerase III subunit CHI; DNA replication, CHI binds to SSB and PSI, transferase; HET: DNA; 1.85A {Escherichia coli} SCOP: c.128.1.1 PDB: 1em8_A*
Probab=39.86 E-value=48 Score=18.32 Aligned_cols=28 Identities=14% Similarity=0.095 Sum_probs=18.7
Q ss_pred HHHHHHhcCCcEEEeeccChhhHHHHHHH
Q 035377 22 LIATTVNSGVLHFAVNGVSEEDWNLVKDM 50 (66)
Q Consensus 22 ~~~~~~~~gv~~~~~~~~~~~~~~~~~~l 50 (66)
+++++...|-+ +++.+.+.+..+.+-++
T Consensus 31 L~~ka~~~G~r-v~V~~~d~~~a~~LD~~ 58 (150)
T 3sxu_A 31 IAAERWRSGKR-VLIACEDEKQAYRLDEA 58 (150)
T ss_dssp HHHHHHHTTCC-EEEECSSHHHHHHHHHH
T ss_pred HHHHHHHcCCe-EEEECCCHHHHHHHHHH
Confidence 88899998854 55556666666555544
No 355
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=39.84 E-value=44 Score=17.85 Aligned_cols=13 Identities=15% Similarity=0.192 Sum_probs=6.9
Q ss_pred HHHHHHHHHhcCC
Q 035377 19 APQLIATTVNSGV 31 (66)
Q Consensus 19 ~~~~~~~~~~~gv 31 (66)
..+++++.++.|.
T Consensus 71 ~~~~i~~l~~~g~ 83 (137)
T 1ccw_A 71 CKGLRQKCDEAGL 83 (137)
T ss_dssp HTTHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC
Confidence 3445555555555
No 356
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=39.81 E-value=1e+02 Score=21.98 Aligned_cols=35 Identities=9% Similarity=0.063 Sum_probs=28.6
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
+.+++++..++.||+.++++|-+ .++..+.+|++.
T Consensus 471 ~~~~~~~~l~~~~Id~LvvIGGd-gS~~~a~~L~~~ 505 (787)
T 3o8o_A 471 DLGTIAYYFQKNKLDGLIILGGF-EGFRSLKQLRDG 505 (787)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESH-HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCEEEEeCCc-hHHHHHHHHHHH
Confidence 67788899999999999999964 677777777764
No 357
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=39.79 E-value=41 Score=20.26 Aligned_cols=44 Identities=11% Similarity=0.078 Sum_probs=27.3
Q ss_pred CCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC-CeEeeee
Q 035377 16 FHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP-SVIPCFG 62 (66)
Q Consensus 16 ~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~-~i~~~~G 62 (66)
.++++++++++.+.|+..+. +++.-...+.+..+..+ .+-..+|
T Consensus 42 ~~~i~~lc~eA~~~~~~aVc---V~p~~v~~a~~~L~~s~v~v~tVig 86 (239)
T 3ngj_A 42 EEQIRKLCSEAAEYKFASVC---VNPTWVPLCAELLKGTGVKVCTVIG 86 (239)
T ss_dssp HHHHHHHHHHHHHHTCSEEE---ECGGGHHHHHHHHTTSSCEEEEEES
T ss_pred HHHHHHHHHHHHhcCCcEEE---ECHHHHHHHHHHhCCCCCeEEEEec
Confidence 35688899999999987553 45655555555554433 2434444
No 358
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=39.73 E-value=66 Score=20.06 Aligned_cols=16 Identities=19% Similarity=0.271 Sum_probs=8.3
Q ss_pred ccChhhHHHHHHHHHh
Q 035377 38 GVSEEDWNLVKDMSER 53 (66)
Q Consensus 38 ~~~~~~~~~~~~l~~~ 53 (66)
+.+.++.+++.+++++
T Consensus 130 a~~~~ea~~l~~~a~~ 145 (412)
T 4gqa_A 130 AVNEQQAQEMAQAARR 145 (412)
T ss_dssp CSSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 3345555555555554
No 359
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=39.68 E-value=27 Score=19.84 Aligned_cols=35 Identities=9% Similarity=0.061 Sum_probs=18.0
Q ss_pred CHHHHHHHHHhcCCcE-EEeeccChhhHHHHHHHHHh
Q 035377 18 KAPQLIATTVNSGVLH-FAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~-~~~~~~~~~~~~~~~~l~~~ 53 (66)
++.+.++++++.||.- ++.+|+...+-+ +.++++.
T Consensus 123 ~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~ 158 (192)
T 2x5n_A 123 NLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDA 158 (192)
T ss_dssp HHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHh
Confidence 3456677778888763 444454332223 4455554
No 360
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=39.50 E-value=32 Score=20.79 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=18.5
Q ss_pred HHHHHhcCCcEEEeeccChhh
Q 035377 23 IATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~~~~~ 43 (66)
++.|.++|+.-++|+|-++++
T Consensus 107 v~~Al~~GL~pI~CvGEtlee 127 (244)
T 2v5b_A 107 VAQACAAGFHVIVCVGETNEE 127 (244)
T ss_dssp HHHHHHTTCEEEEEECCCHHH
T ss_pred HHHHHHCCCeEEEEcCCcHHH
Confidence 678899999999999988776
No 361
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=39.44 E-value=52 Score=18.60 Aligned_cols=32 Identities=13% Similarity=0.059 Sum_probs=20.9
Q ss_pred HHHHHHHhcC-CcEEEeeccChhhHHHHHHHHH
Q 035377 21 QLIATTVNSG-VLHFAVNGVSEEDWNLVKDMSE 52 (66)
Q Consensus 21 ~~~~~~~~~g-v~~~~~~~~~~~~~~~~~~l~~ 52 (66)
+.++++.+.+ ++++++.+.+.+.....++.+.
T Consensus 49 ~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~ 81 (276)
T 3ksm_A 49 QILSYHLSQAPPDALILAPNSAEDLTPSVAQYR 81 (276)
T ss_dssp HHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHH
Confidence 5677777888 9998887765544444444443
No 362
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=39.44 E-value=22 Score=22.76 Aligned_cols=24 Identities=8% Similarity=0.163 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccCh
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSE 41 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~ 41 (66)
++..+.++++++.| .++++|||+-
T Consensus 237 ~~ta~~in~aka~G-~RViAVGTTs 260 (346)
T 1yy3_A 237 EETAAALNKVRENG-GRIISVGTTS 260 (346)
T ss_dssp HHHHHHHHHHHHTT-CCEEEECTTT
T ss_pred HHHHHHHHHHHHcC-CeEEEEecch
Confidence 34567888999988 6799999853
No 363
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=39.33 E-value=48 Score=18.20 Aligned_cols=35 Identities=6% Similarity=0.049 Sum_probs=23.6
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKD 49 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~ 49 (66)
..+...+++++.++.|+...++.+...+..+..++
T Consensus 105 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~ 139 (237)
T 4ex6_A 105 LYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAE 139 (237)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHH
Confidence 34678889999999998766665555444444444
No 364
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=39.32 E-value=55 Score=18.81 Aligned_cols=44 Identities=11% Similarity=-0.013 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeee
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
++..++++++.+.|+..+ .+...-.+..+.++.+++ +.+...+|
T Consensus 25 ~~~~~~~~~l~~gGv~~i-el~~k~~~~~~~i~~~~~-~~~~~gag 68 (207)
T 2yw3_A 25 EDLLGLARVLEEEGVGAL-EITLRTEKGLEALKALRK-SGLLLGAG 68 (207)
T ss_dssp CCHHHHHHHHHHTTCCEE-EEECSSTHHHHHHHHHTT-SSCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEE-EEeCCChHHHHHHHHHhC-CCCEEEeC
Confidence 467788999999998855 444444445566666777 77554444
No 365
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=39.28 E-value=53 Score=18.67 Aligned_cols=39 Identities=8% Similarity=-0.129 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
.++++.++.+++.|++++=+......+.+++.++.+++.
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~g 53 (260)
T 1k77_A 15 VPFIERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNH 53 (260)
T ss_dssp SCGGGHHHHHHHHTCSEEECSCCTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhCCCEEEecCCCCCCHHHHHHHHHHcC
Confidence 467888899999999876544333445667777788774
No 366
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=39.16 E-value=55 Score=18.84 Aligned_cols=38 Identities=13% Similarity=0.055 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccC---hhhHHHHHHHHHhC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVS---EEDWNLVKDMSERH 54 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~---~~~~~~~~~l~~~~ 54 (66)
+.+.+.++.|.+.|...+++.... ...+.++.++++++
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~ 124 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARH 124 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHhc
Confidence 456666677777776665433211 12455555666554
No 367
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=38.80 E-value=53 Score=18.64 Aligned_cols=35 Identities=11% Similarity=0.123 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHH
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS 51 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~ 51 (66)
+..+.++..+.+.|..+..+..+.++..+++.+..
T Consensus 119 ~~v~~~~~~a~~~G~~G~~~~~~~~~~i~~lr~~~ 153 (208)
T 2czd_A 119 PLTDRFIEVANEIEPFGVIAPGTRPERIGYIRDRL 153 (208)
T ss_dssp GGHHHHHHHHHHHCCSEEECCCSSTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCcEEEECCCChHHHHHHHHhC
Confidence 34566777778888887776666666666555544
No 368
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=38.80 E-value=24 Score=19.00 Aligned_cols=35 Identities=0% Similarity=-0.215 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
..++++++.+.|++.+++..... .+++.++++++.
T Consensus 83 ~~~v~~~~~~~gi~~i~~~~g~~--~~~~~~~a~~~G 117 (140)
T 1iuk_A 83 LMDHLPEVLALRPGLVWLQSGIR--HPEFEKALKEAG 117 (140)
T ss_dssp HTTTHHHHHHHCCSCEEECTTCC--CHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEEcCCcC--HHHHHHHHHHcC
Confidence 45567788889998765443222 467788888764
No 369
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=38.78 E-value=36 Score=18.09 Aligned_cols=35 Identities=3% Similarity=-0.089 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
..++++++.+.|++.++. ....+ .+++.++++++.
T Consensus 71 v~~~v~e~~~~g~k~v~~-~~G~~-~~e~~~~a~~~G 105 (122)
T 3ff4_A 71 QLSEYNYILSLKPKRVIF-NPGTE-NEELEEILSENG 105 (122)
T ss_dssp HGGGHHHHHHHCCSEEEE-CTTCC-CHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEE-CCCCC-hHHHHHHHHHcC
Confidence 556788898999987543 32222 357788888874
No 370
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=38.73 E-value=36 Score=20.96 Aligned_cols=35 Identities=17% Similarity=0.281 Sum_probs=24.9
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
.+++.+.+++.|+-.++.-|...+..+++.+.+++
T Consensus 21 ~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~ 55 (319)
T 1w9y_A 21 MEMIKDACENWGFFELVNHGIPREVMDTVEKMTKG 55 (319)
T ss_dssp HHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45677778888987777777877776666665554
No 371
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=38.69 E-value=40 Score=17.02 Aligned_cols=39 Identities=13% Similarity=-0.176 Sum_probs=25.4
Q ss_pred HHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeee
Q 035377 24 ATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGV 63 (66)
Q Consensus 24 ~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~Gi 63 (66)
+-.+..+.++++++|.+..-.- +..++.++|.+..+.|+
T Consensus 72 ~~~~~~~~~~~~lvG~S~Gg~~-a~~~a~~~p~l~~~~g~ 110 (131)
T 2dst_A 72 GFAVMMNLGAPWVLLRGLGLAL-GPHLEALGLRALPAEGV 110 (131)
T ss_dssp HHHHHTTCCSCEEEECGGGGGG-HHHHHHTTCCEEECSSS
T ss_pred HHHHHcCCCccEEEEEChHHHH-HHHHHhcCCcEecCCCc
Confidence 3445567778888887766543 45567778887666553
No 372
>1nox_A NADH oxidase; flavoenzyme, flavoprotein FMN, oxidoreductase, thermophIle; HET: FMN; 1.59A {Thermus thermophilus} SCOP: d.90.1.1
Probab=38.64 E-value=33 Score=19.01 Aligned_cols=44 Identities=14% Similarity=0.155 Sum_probs=26.2
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC-CCeEeeeee
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH-PSVIPCFGV 63 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~-~~i~~~~Gi 63 (66)
..++-.|.+.|+..+...|.+.+...+.+.+-+.+ +-...++|.
T Consensus 141 ~nl~LaA~~~Glgs~~~~~~~~~~v~~~l~lp~~~~~~~~i~lGy 185 (205)
T 1nox_A 141 GYLLLLLEAYGLGSVPMLGFDPERVRAILGLPSRAAIPALVALGY 185 (205)
T ss_dssp HHHHHHHHHTTCEEEEECCSCHHHHHHHHTCCTTCEEEEEEEEES
T ss_pred HHHHHHHHHcCCCcccccCCCHHHHHHHhCCCCCCceEEEEEecc
Confidence 34555678899988877666655566655554332 123346664
No 373
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=38.64 E-value=74 Score=20.46 Aligned_cols=31 Identities=10% Similarity=0.027 Sum_probs=22.4
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
.+.++++++++.|+.-.++.+.+.+..+..+
T Consensus 260 gv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l 290 (387)
T 3nvb_A 260 EFQEWVKKLKNRGIIIAVCSKNNEGKAKEPF 290 (387)
T ss_dssp HHHHHHHHHHHTTCEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 4678899999999987777665555444444
No 374
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=38.50 E-value=67 Score=19.95 Aligned_cols=17 Identities=18% Similarity=0.259 Sum_probs=8.5
Q ss_pred ccChhhHHHHHHHHHhC
Q 035377 38 GVSEEDWNLVKDMSERH 54 (66)
Q Consensus 38 ~~~~~~~~~~~~l~~~~ 54 (66)
+.+.++.+++.+++++.
T Consensus 98 a~~~~e~~~l~~~a~~~ 114 (387)
T 3moi_A 98 TLSRDEADRMIEAVERA 114 (387)
T ss_dssp CSCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh
Confidence 34455555555555543
No 375
>3jtw_A Dihydrofolate reductase; YP_805003.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 1.90A {Pediococcus pentosaceus atcc 25745}
Probab=38.49 E-value=39 Score=18.80 Aligned_cols=31 Identities=6% Similarity=0.011 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
.++++.++++++.+++.+++.| ..+-+...+
T Consensus 96 ~~l~~~l~~l~~~~~~~i~v~G-G~~l~~~~l 126 (178)
T 3jtw_A 96 QSPVELVKRIQKEKGKDVWIVG-GAKIIDPLV 126 (178)
T ss_dssp SCHHHHHHHHHTSSCCEEEEEE-CHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEEEC-hHHHHHHHH
Confidence 4899999999999999988887 345554444
No 376
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=38.34 E-value=1.1e+02 Score=22.22 Aligned_cols=46 Identities=15% Similarity=0.103 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh---CCC-eEeeeee
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER---HPS-VIPCFGV 63 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~---~~~-i~~~~Gi 63 (66)
++.+++++..++.||+.++++|.+ .++..+.+|++. +|. =.+.+|+
T Consensus 649 ~~~~~i~~~l~~~~Id~LvvIGGd-gS~~~a~~L~~~~~~~~~~~i~vVGI 698 (941)
T 3opy_B 649 ADIGMIAYFFEKYGFDGLILVGGF-EAFISLHQLERARINYPSLRIPLVLI 698 (941)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEESH-HHHHHHHHHHHGGGTCGGGCSCEEEE
T ss_pred chHHHHHHHHHHcCCCEEEEeCCc-hHHHHHHHHHHHHHhcCccCCcEEee
Confidence 467889999999999999999964 667767777653 442 2345554
No 377
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=38.23 E-value=30 Score=20.41 Aligned_cols=48 Identities=17% Similarity=0.250 Sum_probs=25.8
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeecc-ChhhHHHHHHHHHhC
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGV-SEEDWNLVKDMSERH 54 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~-~~~~~~~~~~l~~~~ 54 (66)
+.|.|.| |.+. .....++.+.+.|.+.+-+-.. .....+.+++.++++
T Consensus 69 ~lD~kl~-Dip~---t~~~~i~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~ 117 (245)
T 1eix_A 69 FLDLKFH-DIPN---TAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPF 117 (245)
T ss_dssp EEEEEEC-SCHH---HHHHHHHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGG
T ss_pred EEEeecc-ccHH---HHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHc
Confidence 6788887 5322 1334566777778775533322 222255555555543
No 378
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=38.20 E-value=49 Score=17.95 Aligned_cols=29 Identities=7% Similarity=-0.052 Sum_probs=19.9
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHH
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLV 47 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~ 47 (66)
..+.+++.++.|+.-.++.|......+..
T Consensus 40 ~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~ 68 (180)
T 1k1e_A 40 DGLGIKMLMDADIQVAVLSGRDSPILRRR 68 (180)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCCHHHHHH
T ss_pred hHHHHHHHHHCCCeEEEEeCCCcHHHHHH
Confidence 45789999999998776666554444433
No 379
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=37.94 E-value=58 Score=19.39 Aligned_cols=37 Identities=11% Similarity=0.178 Sum_probs=25.5
Q ss_pred CHHHHHHHHHhcCCcEEE-eeccChhhHHHHHHHHHhC
Q 035377 18 KAPQLIATTVNSGVLHFA-VNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~-~~~~~~~~~~~~~~l~~~~ 54 (66)
-..+.+..+.++|+.-++ .+|.+.+..+++.+++++.
T Consensus 57 a~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~ 94 (245)
T 1p9l_A 57 VVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAK 94 (245)
T ss_dssp THHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhC
Confidence 467788888899987554 3344666677777777744
No 380
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=37.74 E-value=49 Score=20.66 Aligned_cols=37 Identities=16% Similarity=0.160 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCCcEEEeec-cChhhHHHHHHHHHhCCCeE
Q 035377 19 APQLIATTVNSGVLHFAVNG-VSEEDWNLVKDMSERHPSVI 58 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~-~~~~~~~~~~~l~~~~~~i~ 58 (66)
-.++++++.+.|+ ++.++ ++.+.+..++++++ .|-|+
T Consensus 141 G~~vV~emnrlGm--ivDlSH~s~~~~~dvl~~s~-~Pvi~ 178 (325)
T 2i5g_A 141 GREIVAEMNRVGI--MCDLSHVGSKTSEEVILESK-KPVCY 178 (325)
T ss_dssp HHHHHHHHHHHTC--EEECTTBCHHHHHHHHHHCS-SCCEE
T ss_pred HHHHHHHHHHcCc--EEEcCcCCHHHHHHHHHHhC-CCEEE
Confidence 5689999999888 77777 78888888888876 46443
No 381
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=37.53 E-value=68 Score=19.54 Aligned_cols=17 Identities=12% Similarity=0.001 Sum_probs=8.5
Q ss_pred ccChhhHHHHHHHHHhC
Q 035377 38 GVSEEDWNLVKDMSERH 54 (66)
Q Consensus 38 ~~~~~~~~~~~~l~~~~ 54 (66)
+.+.++.+++.+++++.
T Consensus 109 a~~~~~~~~l~~~a~~~ 125 (354)
T 3q2i_A 109 ATRWEDGLEMVKAADKA 125 (354)
T ss_dssp CSSHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh
Confidence 34455555555555543
No 382
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=37.39 E-value=48 Score=17.62 Aligned_cols=33 Identities=0% Similarity=-0.189 Sum_probs=21.9
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLV 47 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~ 47 (66)
..+...+++++.++.|+.-.++.+...+..+..
T Consensus 85 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~ 117 (216)
T 2pib_A 85 ENPGVREALEFVKSKRIKLALATSTPQREALER 117 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHH
Confidence 346788899999999987665555444434333
No 383
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=37.38 E-value=45 Score=20.28 Aligned_cols=22 Identities=9% Similarity=0.074 Sum_probs=18.8
Q ss_pred HHHHHhcCCcEEEeeccChhhH
Q 035377 23 IATTVNSGVLHFAVNGVSEEDW 44 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~~~~~~ 44 (66)
+++|.++|+.-++|+|-++++-
T Consensus 115 v~~Al~~GL~pIlCvGEtleer 136 (255)
T 3qst_A 115 AKFALENGMKIIYCCGEHLSER 136 (255)
T ss_dssp HHHHHHTTCEEEEEECCCHHHH
T ss_pred HHHHHHCCCeEEEEcCCcHHHH
Confidence 6788999999999999887653
No 384
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=37.33 E-value=55 Score=19.99 Aligned_cols=35 Identities=11% Similarity=0.001 Sum_probs=23.8
Q ss_pred CCCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 16 FHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 16 ~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
.+++.+++++|.+.|+..+. +++.-...+.+..+.
T Consensus 58 ~~~I~~lc~eA~~~~~aaVC---V~p~~V~~a~~~L~g 92 (260)
T 3r12_A 58 PDDIKKLCLEARENRFHGVC---VNPCYVKLAREELEG 92 (260)
T ss_dssp HHHHHHHHHHHHHTTCSEEE---ECGGGHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCcEEE---ECHHHHHHHHHHhcC
Confidence 35788899999999987553 456655555555543
No 385
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=37.33 E-value=77 Score=21.80 Aligned_cols=29 Identities=10% Similarity=0.036 Sum_probs=22.1
Q ss_pred cCCCCHHHHHHHHHhcCCcEEEeeccChh
Q 035377 14 RIFHKAPQLIATTVNSGVLHFAVNGVSEE 42 (66)
Q Consensus 14 ~~~~~~~~~~~~~~~~gv~~~~~~~~~~~ 42 (66)
+..++..+.++++++.|++-.++.|-+.+
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~ 563 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWR 563 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHH
Confidence 45678899999999999986666664443
No 386
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=37.31 E-value=40 Score=22.31 Aligned_cols=48 Identities=4% Similarity=0.073 Sum_probs=23.9
Q ss_pred CHHHHHHHHHhcCCcE-EEeeccCh------------hhHHHHHHHHHh--CCCeEeeeeecC
Q 035377 18 KAPQLIATTVNSGVLH-FAVNGVSE------------EDWNLVKDMSER--HPSVIPCFGVHP 65 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~-~~~~~~~~------------~~~~~~~~l~~~--~~~i~~~~GiHP 65 (66)
++.++++...+.|... +-.+-.++ ++.+++.+|++. -.+|.+..++||
T Consensus 18 ~R~~l~~f~g~~kmNtYiYAPKDDpyhr~~WRe~Yp~eel~~l~eLv~~a~~~~V~Fv~aisP 80 (447)
T 2xsa_A 18 ERATVMDWIAAAGMNTYIYGPKDDVHVRARWRVPYDAAGLARLTELRDAAAARGMVFYVSLAP 80 (447)
T ss_dssp HHHHHHHHHHHTTCCEEEECCTTCTTTTTTTTSCCCHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHHHHcCCceEEEccCCChHHHHhhcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4556666666666653 33433321 222333333332 135777777777
No 387
>2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C
Probab=37.25 E-value=16 Score=20.28 Aligned_cols=21 Identities=14% Similarity=0.200 Sum_probs=17.7
Q ss_pred cChhhHHHHHHHHHhCCCeEe
Q 035377 39 VSEEDWNLVKDMSERHPSVIP 59 (66)
Q Consensus 39 ~~~~~~~~~~~l~~~~~~i~~ 59 (66)
.+.+.+.++.+++.++|.+|+
T Consensus 115 fD~~~yn~lv~l~~~f~~lF~ 135 (142)
T 2pi2_E 115 FDLGLYNEAVKIIHDFPQFYP 135 (142)
T ss_dssp CCHHHHHHHHHHHHHCGGGSC
T ss_pred cCHHHHHHHHHHHHhCccceE
Confidence 467788999999999998775
No 388
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=37.01 E-value=36 Score=20.95 Aligned_cols=22 Identities=14% Similarity=0.167 Sum_probs=18.8
Q ss_pred HHHHHhcCCcEEEeeccChhhH
Q 035377 23 IATTVNSGVLHFAVNGVSEEDW 44 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~~~~~~ 44 (66)
+++|.++|+.-++|+|-++++-
T Consensus 136 v~~Al~~GL~pIlCVGEtleer 157 (271)
T 3krs_A 136 VKKGLENGLKIVLCIGESLSER 157 (271)
T ss_dssp HHHHHHTTCEEEEEECCCHHHH
T ss_pred HHHHHHCCCeEEEEeCCcHHHH
Confidence 6788999999999999887753
No 389
>1vdr_A DHFR, dihydrofolate reductase; oxidoreductase, halophilic enzyme; 2.55A {Haloferax volcanii} SCOP: c.71.1.1 PDB: 2ith_A 2jyb_A
Probab=36.96 E-value=24 Score=19.34 Aligned_cols=34 Identities=9% Similarity=0.030 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHH
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS 51 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~ 51 (66)
.++++.++++++.+.+.++++| ..+-++..++++
T Consensus 80 ~~~~~~l~~l~~~~~~~i~viG-G~~l~~~~l~lv 113 (162)
T 1vdr_A 80 ASVEEAVDIAASLDAETAYVIG-GAAIYALFQPHL 113 (162)
T ss_dssp SSHHHHHHHHHHTTCSCEEEEE-CHHHHHHHGGGC
T ss_pred CCHHHHHHHHHhCCCCcEEEEC-CHHHHHHHHHhC
Confidence 4789999998887777788777 456666666543
No 390
>2b67_A COG0778: nitroreductase; alpha-beta sandwich, FMN binding pocket, structural genomics protein structure initiative; HET: MSE FMN; 2.05A {Streptococcus pneumoniae} SCOP: d.90.1.1
Probab=36.96 E-value=29 Score=19.27 Aligned_cols=44 Identities=18% Similarity=0.332 Sum_probs=26.2
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC-CCeEeeeee
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH-PSVIPCFGV 63 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~-~~i~~~~Gi 63 (66)
..++-.|.+.|+..+..-|.+.+...+.+.+-+.+ +-...++|.
T Consensus 140 ~nl~LaA~~~Glgsc~~~~~~~~~v~~~l~lp~~~~~~~~i~lGy 184 (204)
T 2b67_A 140 MNLVLALTDQGIGSNIILGFDKSKVNEVLEIEDRFRPELLITVGY 184 (204)
T ss_dssp HHHHHHHHHTTCEEEEECCBCHHHHHHHHTCCTTEEEEEEEEEEC
T ss_pred HHHHHHHHHCCCceeeEcccCHHHHHHHhCCCCCCceEEEEEeec
Confidence 44566788999998876666655555555543322 123346663
No 391
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=36.94 E-value=56 Score=18.22 Aligned_cols=26 Identities=12% Similarity=0.073 Sum_probs=20.0
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccC
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVS 40 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~ 40 (66)
..+...++++++++.|+.-.++.+..
T Consensus 51 ~~pg~~e~L~~L~~~G~~~~ivTn~~ 76 (211)
T 2gmw_A 51 FIDGVIDAMRELKKMGFALVVVTNQS 76 (211)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred CCcCHHHHHHHHHHCCCeEEEEECcC
Confidence 45678999999999998866655544
No 392
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=36.93 E-value=38 Score=19.04 Aligned_cols=18 Identities=17% Similarity=0.261 Sum_probs=15.0
Q ss_pred CCHHHHHHHHHhcCCcEE
Q 035377 17 HKAPQLIATTVNSGVLHF 34 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~ 34 (66)
.+++++++++.+.||+-.
T Consensus 102 ~~l~eli~~a~~~Gvk~~ 119 (160)
T 3pnx_A 102 PKLSDLLSGARKKEVKFY 119 (160)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHCCCEEE
Confidence 468999999999998643
No 393
>3bem_A Putative NAD(P)H nitroreductase YDFN; 2632848, putative nitroreductase YDFN, structural genomics, center for structural genomics, JCSG; HET: MSE FMN; 1.65A {Bacillus subtilis}
Probab=36.92 E-value=28 Score=19.70 Aligned_cols=44 Identities=9% Similarity=0.167 Sum_probs=25.9
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC-CCeEeeeee
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH-PSVIPCFGV 63 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~-~~i~~~~Gi 63 (66)
..++-.|.+.|+..+..-+.+.+...+.+.+-+.+ +-...++|+
T Consensus 152 ~nl~LaA~~lGLgsc~~~~~~~~~v~~~L~lp~~~~~~~~i~lGy 196 (218)
T 3bem_A 152 MMFMLSAAAAGWDTCPMIGFDAEAVKRILNIDDQFEVVMMITIGK 196 (218)
T ss_dssp HHHHHHHHHTTCEEEEECCSCHHHHHHHHTCCTTEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCcccccCcCHHHHHHHhCCCCCceeEEEEEecC
Confidence 44556778899998877666555555555443222 123346674
No 394
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=36.90 E-value=59 Score=18.51 Aligned_cols=45 Identities=13% Similarity=0.018 Sum_probs=24.4
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeec-cChhhHHHHHHHHHhC
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNG-VSEEDWNLVKDMSERH 54 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~-~~~~~~~~~~~l~~~~ 54 (66)
+.|.|.| + ....+.+.+.+.|.+.+.+-+ ...+..+++++.++++
T Consensus 60 ~lD~kl~-d------ip~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~ 105 (216)
T 1q6o_A 60 LADAKIA-D------AGKILSRMCFEANADWVTVICCADINTAKGALDVAKEF 105 (216)
T ss_dssp EEEEEEC-S------CHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHT
T ss_pred EEEEEec-c------cHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHc
Confidence 5688876 3 244555566677776554333 2233355555555554
No 395
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=36.80 E-value=68 Score=19.19 Aligned_cols=38 Identities=8% Similarity=0.260 Sum_probs=24.5
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhh-H-HHHHHHHHhCCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEED-W-NLVKDMSERHPS 56 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~-~-~~~~~l~~~~~~ 56 (66)
+.++++.....|+++++++...-.+ . .-+.++..++++
T Consensus 99 l~di~~sl~~~G~rrlvivNgHGGN~l~~a~~~l~~~~~~ 138 (254)
T 3lub_A 99 LEDIVSSLHVQGFRKLLILSGHGGNNFKGMIRDLAFEYPD 138 (254)
T ss_dssp HHHHHHHHHHTTCCEEEEEESCTTCCCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCCEEEEEeCCchHHHHHHHHHHHHHCCC
Confidence 5567777788999998777542222 2 334567777765
No 396
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=36.73 E-value=44 Score=19.38 Aligned_cols=25 Identities=4% Similarity=-0.033 Sum_probs=18.2
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhh
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~ 43 (66)
..+.++.+.+.+++++++.+.+..+
T Consensus 55 ~~~~~~~l~~~~vdgiIi~~~~~~~ 79 (289)
T 3k9c_A 55 EKVAVQALMRERCEAAILLGTRFDT 79 (289)
T ss_dssp HHHHHHHHTTTTEEEEEEETCCCCH
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCH
Confidence 5667777888888888877765443
No 397
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=36.65 E-value=64 Score=18.82 Aligned_cols=38 Identities=21% Similarity=0.181 Sum_probs=27.9
Q ss_pred CHHHHHHHHHhcCCcEEEeeccC--hhhHHHHHHHHHhCC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVS--EEDWNLVKDMSERHP 55 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~--~~~~~~~~~l~~~~~ 55 (66)
++++.++.+++.|++.+=+.... ..+.+++.++.+++.
T Consensus 42 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~g 81 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELN 81 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcC
Confidence 57888999999999986554443 356777788877764
No 398
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=36.60 E-value=70 Score=19.29 Aligned_cols=41 Identities=7% Similarity=0.058 Sum_probs=21.7
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhCCCeEeeee
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
.+++.+|.++|. .+++ ++.+.++.+++.+++++. ++...+|
T Consensus 80 ~~~~~~al~~Gk-hVl~EKP~a~~~~e~~~l~~~a~~~-~~~~~v~ 123 (334)
T 3ohs_X 80 KAAVMLCLAAGK-AVLCEKPMGVNAAEVREMVTEARSR-GLFLMEA 123 (334)
T ss_dssp HHHHHHHHHTTC-EEEEESSSSSSHHHHHHHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHHhcCC-EEEEECCCCCCHHHHHHHHHHHHHh-CCEEEEE
Confidence 344555556663 2332 355666666666666664 3333444
No 399
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=36.54 E-value=51 Score=17.64 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=23.9
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
...++++++.+.|+..+++.... ..+++.+.++++
T Consensus 81 ~v~~v~~~~~~~g~~~i~~~~~~--~~~~l~~~a~~~ 115 (138)
T 1y81_A 81 VGLQVAKEAVEAGFKKLWFQPGA--ESEEIRRFLEKA 115 (138)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTS--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCcc--HHHHHHHHHHHC
Confidence 36677888888999886654433 246677777765
No 400
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=36.50 E-value=65 Score=18.87 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=22.5
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
.+.++.+.+.+++++++.+.+.+.....++.+.+
T Consensus 49 ~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~ 82 (330)
T 3uug_A 49 LSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGE 82 (330)
T ss_dssp HHHHHHHHHHTCSEEEECCSSGGGGHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCCchhHHHHHHHHHH
Confidence 3566777778899888877776555555544443
No 401
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=36.49 E-value=56 Score=18.14 Aligned_cols=35 Identities=6% Similarity=0.153 Sum_probs=22.2
Q ss_pred CHHHHHHHHHhcCCcEEEeeccCh-hhHHHHHHHHHh
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSE-EDWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~-~~~~~~~~l~~~ 53 (66)
++.+..+++++.||. +..+|... .+.+.+.+++..
T Consensus 134 ~~~~~a~~l~~~gi~-i~~igvG~~~~~~~L~~iA~~ 169 (202)
T 1ijb_A 134 NFVRYVQGLKKKKVI-VIPVGIGPHANLKQIRLIEKQ 169 (202)
T ss_dssp THHHHHHHHHHTTEE-EEEEEESTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCE-EEEEecCCcCCHHHHHHHhCC
Confidence 566777888888875 44556543 345556667653
No 402
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=36.47 E-value=37 Score=22.25 Aligned_cols=21 Identities=5% Similarity=-0.053 Sum_probs=18.8
Q ss_pred CHHHHHHHHHhcCCcEEEeec
Q 035377 18 KAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~ 38 (66)
|.+++++.++++|.+.+++++
T Consensus 106 Dp~~Wa~~~k~AGakyvvlTa 126 (455)
T 2zxd_A 106 DPQEWADLFKKAGAKYVIPTT 126 (455)
T ss_dssp CHHHHHHHHHHTTCSEEEEEE
T ss_pred CHHHHHHHHHHhCCCEEEEEe
Confidence 789999999999999988764
No 403
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=36.34 E-value=37 Score=20.36 Aligned_cols=37 Identities=11% Similarity=0.193 Sum_probs=23.3
Q ss_pred CHHHHHHHHHhcCCcEEE-eeccChhhHHHHHHHHHhC
Q 035377 18 KAPQLIATTVNSGVLHFA-VNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~-~~~~~~~~~~~~~~l~~~~ 54 (66)
-..+.++.|.+.|+.-++ ..|.+.+..+.+.+++++-
T Consensus 65 a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~~ 102 (228)
T 1vm6_A 65 ALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKEV 102 (228)
T ss_dssp GHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHHhhC
Confidence 366778888899986443 2233566666666665553
No 404
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=36.27 E-value=38 Score=20.62 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=18.5
Q ss_pred HHHHHhcCCcEEEeeccChhh
Q 035377 23 IATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~~~~~ 43 (66)
++.|.++|+.-++|+|-++++
T Consensus 113 v~~Al~~GL~pI~CvGEtlee 133 (255)
T 1tre_A 113 FAVLKEQGLTPVLCIGETEAE 133 (255)
T ss_dssp HHHHHHTTCEEEEEECCCHHH
T ss_pred HHHHHHCCCEEEEEcCCcHHH
Confidence 678899999999999988775
No 405
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=36.26 E-value=89 Score=20.59 Aligned_cols=45 Identities=16% Similarity=0.083 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
..+.++++++.|++.+|+.+-...+.+ .+++++.|++=..+|=|+
T Consensus 197 ~~~~v~~l~~~g~D~iI~l~H~g~~~d--~~la~~~~giDlIlgGHt 241 (546)
T 4h2g_A 197 LQPEVDKLKTLNVNKIIALGHSGFEMD--KLIAQKVRGVDVVVGGHS 241 (546)
T ss_dssp HHHHHHHHHHTTCCCEEEEEESCHHHH--HHHHHHSTTCCEEECCSS
T ss_pred HHHHHHHHHhcCCCEEEEEeccCccch--HHHHHhCCCCcEEEeCCc
Confidence 455667777788887777664333332 467777777666666665
No 406
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=36.23 E-value=60 Score=18.37 Aligned_cols=47 Identities=15% Similarity=0.093 Sum_probs=29.3
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChh-----------hHHHHHHHHHhCC-CeEeeeeec
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEE-----------DWNLVKDMSERHP-SVIPCFGVH 64 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~-----------~~~~~~~l~~~~~-~i~~~~GiH 64 (66)
.++++++.+++.+++.++..|--.. +..+++++.++.+ .++...|=|
T Consensus 40 ~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNH 98 (208)
T 1su1_A 40 ATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNC 98 (208)
T ss_dssp HHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTT
T ss_pred HHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcCCceEEEECCC
Confidence 3567777777677888887773110 2456666666554 466666655
No 407
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=36.21 E-value=56 Score=18.05 Aligned_cols=31 Identities=16% Similarity=0.109 Sum_probs=20.7
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWN 45 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~ 45 (66)
..+...+++++.++.|+.-.++.+......+
T Consensus 84 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~ 114 (222)
T 2nyv_A 84 PYPEIPYTLEALKSKGFKLAVVSNKLEELSK 114 (222)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHH
T ss_pred cCCCHHHHHHHHHHCCCeEEEEcCCCHHHHH
Confidence 4567889999999999875555443333333
No 408
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=36.16 E-value=53 Score=17.74 Aligned_cols=33 Identities=12% Similarity=-0.037 Sum_probs=22.3
Q ss_pred CCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 16 FHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 16 ~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
.+...++++++++.|+.-.++.+...+..+..+
T Consensus 72 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l 104 (205)
T 3m9l_A 72 APGAVELVRELAGRGYRLGILTRNARELAHVTL 104 (205)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred CccHHHHHHHHHhcCCeEEEEeCCchHHHHHHH
Confidence 457889999999999876665554444444333
No 409
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=36.15 E-value=60 Score=18.36 Aligned_cols=40 Identities=25% Similarity=0.289 Sum_probs=28.5
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCC-eEe
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS-VIP 59 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~-i~~ 59 (66)
.+++.+-....|++++.++|.+....- +++++.++|. +..
T Consensus 69 a~dl~~~l~~l~~~~~~lvGhS~GG~i-a~~~A~~~p~~v~~ 109 (268)
T 3v48_A 69 AAELHQALVAAGIEHYAVVGHALGALV-GMQLALDYPASVTV 109 (268)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETHHHHH-HHHHHHHCTTTEEE
T ss_pred HHHHHHHHHHcCCCCeEEEEecHHHHH-HHHHHHhChhhceE
Confidence 334555556778888999999888754 6678888886 443
No 410
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=36.13 E-value=63 Score=18.63 Aligned_cols=44 Identities=7% Similarity=-0.020 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCCcEEEeec-----------------------cChhhHHHHHHHHHhCCCeEeeeee
Q 035377 19 APQLIATTVNSGVLHFAVNG-----------------------VSEEDWNLVKDMSERHPSVIPCFGV 63 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~-----------------------~~~~~~~~~~~l~~~~~~i~~~~Gi 63 (66)
.++.++.+++.|+..+=+.+ ..++..++++++|+++ +++..+-+
T Consensus 44 ~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~-Gi~vil~~ 110 (351)
T 3vup_A 44 IEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKY-NILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 56678889999987542211 2345567888999987 45544333
No 411
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=36.05 E-value=58 Score=19.72 Aligned_cols=35 Identities=17% Similarity=0.093 Sum_probs=19.3
Q ss_pred HHHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
..+++.++.++|.. +++ ++.++++.+++.+++++.
T Consensus 78 h~~~~~~al~~gk~-v~~EKP~~~~~~~~~~l~~~a~~~ 115 (344)
T 3euw_A 78 HVDLITRAVERGIP-ALCEKPIDLDIEMVRACKEKIGDG 115 (344)
T ss_dssp HHHHHHHHHHTTCC-EEECSCSCSCHHHHHHHHHHHGGG
T ss_pred hHHHHHHHHHcCCc-EEEECCCCCCHHHHHHHHHHHHhc
Confidence 34455556666643 322 245666666666666654
No 412
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=36.01 E-value=71 Score=19.28 Aligned_cols=21 Identities=10% Similarity=0.101 Sum_probs=16.4
Q ss_pred HHHHHHHHHhcCCcEEEeecc
Q 035377 19 APQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~ 39 (66)
++++++.+++.+++.+++.|-
T Consensus 50 l~~lv~~~~~~~~D~vliaGD 70 (336)
T 2q8u_A 50 LDKVVEEAEKREVDLILLTGD 70 (336)
T ss_dssp HHHHHHHHHHHTCSEEEEESC
T ss_pred HHHHHHHHHHhCCCEEEECCc
Confidence 567888888889998777663
No 413
>1vk8_A Hypothetical protein TM0486; protein with possible role in cell WALL biogenesis, structur genomics, joint center for structural genomics; HET: UNL; 1.80A {Thermotoga maritima} SCOP: d.58.48.1
Probab=35.97 E-value=45 Score=17.55 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=21.6
Q ss_pred HHHHHHHHHhcCCcEEEee-ccChh-hHHHHHHHHHh
Q 035377 19 APQLIATTVNSGVLHFAVN-GVSEE-DWNLVKDMSER 53 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~-~~~~~-~~~~~~~l~~~ 53 (66)
+.+.++..++.|+..-+.+ ||..| +|+++.++.++
T Consensus 35 Va~~i~vi~~sGL~y~~~pmgT~IEGe~devm~vvk~ 71 (106)
T 1vk8_A 35 IDRAIEKISSWGMKYEVGPSNTTVEGEFEEIMDRVKE 71 (106)
T ss_dssp HHHHHHHHHTTCSCEEECSSCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEeCCCccEEEcCHHHHHHHHHH
Confidence 5566666788999875543 45433 57766665543
No 414
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=35.86 E-value=51 Score=17.51 Aligned_cols=26 Identities=15% Similarity=0.013 Sum_probs=19.8
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccC
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVS 40 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~ 40 (66)
..+...++++++++.|+.-.++.+..
T Consensus 28 ~~~g~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 28 ALPGSLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred ECcCHHHHHHHHHHCCCEEEEEECCC
Confidence 45678899999999998766655543
No 415
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=35.84 E-value=53 Score=20.89 Aligned_cols=27 Identities=11% Similarity=0.126 Sum_probs=21.7
Q ss_pred CcCCCCHHHHHHHHHhcCCcEEEeecc
Q 035377 13 PRIFHKAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 13 ~~~~~~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
+++.++.++.+++..+.|+++++++..
T Consensus 245 ~WL~P~t~d~l~~L~~~G~k~vvv~P~ 271 (359)
T 3hcn_A 245 PWLGPQTDESIKGLCERGRKNILLVPI 271 (359)
T ss_dssp CBSSSBHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCCCHHHHHHHHHHcCCCeEEEECC
Confidence 455678999999999999999877653
No 416
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=35.80 E-value=77 Score=19.50 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=31.4
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh-CCC--eEeeeeecC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER-HPS--VIPCFGVHP 65 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~-~~~--i~~~~GiHP 65 (66)
++ +-+++|.+.|.+.+++=..++++.+++.+..+. +|. +..+=|+-|
T Consensus 202 tl-eea~eA~~aGaD~I~LDn~~~e~l~~av~~l~~~~~~v~ieASGGIt~ 251 (285)
T 1o4u_A 202 NL-EDALRAVEAGADIVMLDNLSPEEVKDISRRIKDINPNVIVEVSGGITE 251 (285)
T ss_dssp SH-HHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHHHCTTSEEEEEECCCT
T ss_pred CH-HHHHHHHHcCCCEEEECCCCHHHHHHHHHHhhccCCCceEEEECCCCH
Confidence 44 445556778988877767788888887776654 443 455656654
No 417
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=35.78 E-value=43 Score=20.96 Aligned_cols=34 Identities=24% Similarity=0.411 Sum_probs=25.4
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
+++.+.+++.|+-.++.-|...+..+++.+.+++
T Consensus 68 ~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~ 101 (356)
T 1gp6_A 68 EELKKASLDWGVMHLINHGIPADLMERVKKAGEE 101 (356)
T ss_dssp HHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4566777888987777778887777777776665
No 418
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=35.77 E-value=42 Score=20.61 Aligned_cols=26 Identities=15% Similarity=0.100 Sum_probs=21.1
Q ss_pred cCCCCHHHHHHHHHhc-CCcEEEeecc
Q 035377 14 RIFHKAPQLIATTVNS-GVLHFAVNGV 39 (66)
Q Consensus 14 ~~~~~~~~~~~~~~~~-gv~~~~~~~~ 39 (66)
+..++.++.+++..+. |+++++++..
T Consensus 230 Wl~P~~~~~l~~l~~~~G~k~v~V~P~ 256 (310)
T 2h1v_A 230 WLGPDVQDLTRDLFEQKGYQAFVYVPV 256 (310)
T ss_dssp BSSCBHHHHHHHHHHHHCCSEEEEECT
T ss_pred cCCCCHHHHHHHHHHHcCCceEEEECC
Confidence 3567899999999888 9999877654
No 419
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=35.71 E-value=36 Score=15.97 Aligned_cols=28 Identities=11% Similarity=0.159 Sum_probs=19.8
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
+.-.++.+|++.|+ ++++.++.+.+.++
T Consensus 14 ewl~LI~~Ak~lGl--------sleEIrefL~l~~~ 41 (57)
T 1b0n_B 14 EWVELMVEAKEANI--------SPEEIRKYLLLNKK 41 (57)
T ss_dssp HHHHHHHHHHHTTC--------CHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHcCC--------CHHHHHHHHHHhcc
Confidence 45578899999764 68888887776543
No 420
>1lxn_A Hypothetical protein MTH1187; hypothetical structure, structural genomics, PSI, protein ST initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.48.1
Probab=35.70 E-value=41 Score=17.29 Aligned_cols=36 Identities=11% Similarity=0.016 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHhcCCcEEEee-ccChh--hHHHHHHHHH
Q 035377 17 HKAPQLIATTVNSGVLHFAVN-GVSEE--DWNLVKDMSE 52 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~-~~~~~--~~~~~~~l~~ 52 (66)
+-+.+.++..++.|+..-+.+ ||..+ +|+++.++.+
T Consensus 20 ~~Va~~i~~i~~sgl~y~~~pm~T~iEG~e~devm~vv~ 58 (99)
T 1lxn_A 20 SYVAAAVEALKKLNVRYEISGMGTLLEAEDLDELMEAVK 58 (99)
T ss_dssp HHHHHHHHHHTTSSCEEEEETTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEeCCCeeEEECCCHHHHHHHHH
Confidence 346667777788999875543 56555 5777766544
No 421
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=35.69 E-value=51 Score=17.38 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
.+.++++...|..++++-+-+.+++.++.+.++.
T Consensus 38 ~~~~~~W~~~g~~kivlk~~~e~~l~~l~~~a~~ 71 (115)
T 2zv3_A 38 PRAVDEWLREGQKKVVVKVNSEKELIDIYNKARS 71 (115)
T ss_dssp HHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 4567788888988887756677778777765544
No 422
>2c5q_A RRAA-like protein YER010C; structural genomics,unknown function, structural genomics, unknown function, pseudo-knot; HET: CME; 1.70A {Saccharomyces cerevisiae}
Probab=35.49 E-value=72 Score=19.06 Aligned_cols=41 Identities=17% Similarity=0.174 Sum_probs=27.6
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
+.+..+|+.+|+.++++-|. .+|..++.++- +| ..+.|++|
T Consensus 101 ~l~a~~a~~~G~aGiVidG~-vRD~~el~~l~--~P--V~a~g~~p 141 (240)
T 2c5q_A 101 GLMSTRAQYLKSNGTVVFGR-IRDVDEHRTLN--HP--VFAYGVGS 141 (240)
T ss_dssp HHHHHHHHHTTCCEEEEEEE-ECCHHHHHHHT--CC--EEEEEECS
T ss_pred HHHHHHHHHcCCeEEEecCC-cCCHHHHhcCC--Cc--EEEeecCC
Confidence 34667888999999988774 57777666542 54 24556654
No 423
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=35.49 E-value=82 Score=19.71 Aligned_cols=48 Identities=8% Similarity=0.055 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
++++ -+++|.++|.+.+++=..++++.+++.++.+..-.+..+=|+-|
T Consensus 215 ~tl~-e~~eAl~aGaDiImLDn~s~~~l~~av~~~~~~v~leaSGGIt~ 262 (300)
T 3l0g_A 215 DNIS-QVEESLSNNVDMILLDNMSISEIKKAVDIVNGKSVLEVSGCVNI 262 (300)
T ss_dssp SSHH-HHHHHHHTTCSEEEEESCCHHHHHHHHHHHTTSSEEEEESSCCT
T ss_pred CCHH-HHHHHHHcCCCEEEECCCCHHHHHHHHHhhcCceEEEEECCCCH
Confidence 3444 44556667888877767788888888887664333555555544
No 424
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=35.45 E-value=64 Score=18.48 Aligned_cols=17 Identities=6% Similarity=-0.019 Sum_probs=9.5
Q ss_pred CHHHHHHHHHhcCCcEE
Q 035377 18 KAPQLIATTVNSGVLHF 34 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~ 34 (66)
++++.++.+.+.|++.+
T Consensus 17 ~~~~~l~~~~~~G~~~v 33 (281)
T 3u0h_A 17 SLVLYLDLARETGYRYV 33 (281)
T ss_dssp CHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHcCCCEE
Confidence 45555555555555544
No 425
>3ge6_A Nitroreductase; structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2, oxidoreductase; HET: FMN; 1.85A {Exiguobacterium sibiricum 255-15} SCOP: d.90.1.0
Probab=35.25 E-value=20 Score=20.15 Aligned_cols=43 Identities=19% Similarity=0.271 Sum_probs=26.8
Q ss_pred HHHHHHHhcCCcEEEeeccChhhHHHHHHH-HHhC-CCeEeeeee
Q 035377 21 QLIATTVNSGVLHFAVNGVSEEDWNLVKDM-SERH-PSVIPCFGV 63 (66)
Q Consensus 21 ~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l-~~~~-~~i~~~~Gi 63 (66)
.++-.|.+.|+..+..-|.+.+...+.+.+ -+.+ +-...++|+
T Consensus 148 nl~LaA~~~Glgsc~i~~~~~~~v~~~L~l~p~~~~~~~~ialGy 192 (212)
T 3ge6_A 148 QLMLVARAHGYDTNPIGGYEKDQIAEAFGMEKDRYVPVMLLSIGK 192 (212)
T ss_dssp HHHHHHHHTTCEEEEECCSCHHHHHHHTTCCSSSEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCeeeecccCHHHHHHHhCCCCCCceEEEEEEEeC
Confidence 455577889999888777766656555555 3322 223456774
No 426
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=35.19 E-value=78 Score=20.11 Aligned_cols=35 Identities=11% Similarity=0.096 Sum_probs=19.4
Q ss_pred HHHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
..+++.+|.++|. .+++ ++.++++.+++.+++++.
T Consensus 104 h~~~~~~al~aGk-hV~~EKP~a~~~~ea~~l~~~a~~~ 141 (444)
T 2ixa_A 104 HHEHGVAAMKAGK-IVGMEVSGAITLEECWDYVKVSEQT 141 (444)
T ss_dssp HHHHHHHHHHTTC-EEEECCCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCC-eEEEeCCCcCCHHHHHHHHHHHHHh
Confidence 3445555666664 2333 345666666666666654
No 427
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=35.14 E-value=37 Score=18.23 Aligned_cols=11 Identities=9% Similarity=-0.049 Sum_probs=4.8
Q ss_pred HHHHHHhcCCc
Q 035377 22 LIATTVNSGVL 32 (66)
Q Consensus 22 ~~~~~~~~gv~ 32 (66)
..+++++.|+.
T Consensus 126 ~~~~~~~~~i~ 136 (182)
T 1shu_X 126 EAKISRSLGAS 136 (182)
T ss_dssp HHHHHHHTTCE
T ss_pred HHHHHHhCCCE
Confidence 33444444543
No 428
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=35.12 E-value=55 Score=17.79 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=22.6
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChh-----hHHHHHHHHHh
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEE-----DWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~-----~~~~~~~l~~~ 53 (66)
+..+.++++++.||. +.++|.... +...+.+++..
T Consensus 128 ~~~~~~~~~~~~gi~-i~~igvG~~~~~~~~~~~L~~iA~~ 167 (198)
T 1n3y_A 128 DYKDVIPMADAAGII-RYAIGVGLAFQNRNSWKELNDIASK 167 (198)
T ss_dssp CHHHHHHHHHHTTCE-EEEEEESGGGGSSTTHHHHHHHSCS
T ss_pred cHHHHHHHHHHCCCE-EEEEEccccccccccHHHHHHHHcC
Confidence 457788888888985 445555433 25666667665
No 429
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} SCOP: c.6.2.5
Probab=35.08 E-value=45 Score=20.40 Aligned_cols=56 Identities=13% Similarity=0.189 Sum_probs=33.9
Q ss_pred EeeccCCCC--C-cCCCCHHHHHHHHHhcCCcEEEeecc---ChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 4 FDAHCHLQD--P-RIFHKAPQLIATTVNSGVLHFAVNGV---SEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 4 iDsH~Hl~~--~-~~~~~~~~~~~~~~~~gv~~~~~~~~---~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
||.=|=|.. . +-.++-++++.-...++| .+|. ++....+..++++++. -++|-||.
T Consensus 3 idLN~DlGEsfG~w~~G~D~~lm~~VtSANI----ACGfHAGDp~~M~~tv~lA~~~g---V~IGAHPg 64 (250)
T 2dfa_A 3 VDLNADAGESYGAFAYGHDREIFPLVSSANL----ACGFHGGSPGRILEAVRLAKAHG---VAVGAHPG 64 (250)
T ss_dssp EEEEEEECCCBTTBCCSCHHHHTTTCSEEEE----ECSSSSCCHHHHHHHHHHHHHTT---CEEEEECC
T ss_pred eeeeccCCCCCCCCCCCCHHHHHHhhhhhhh----hccccCCCHHHHHHHHHHHHHcC---CeEecCCC
Confidence 555555532 1 112454566664444433 3443 7888999999999975 46788883
No 430
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=35.04 E-value=35 Score=20.71 Aligned_cols=21 Identities=19% Similarity=0.357 Sum_probs=18.3
Q ss_pred HHHHHhcCCcEEEeeccChhh
Q 035377 23 IATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~~~~~ 43 (66)
++.|.++|+.-++|+|-++++
T Consensus 112 v~~Al~~GL~pI~CvGEtlee 132 (252)
T 2btm_A 112 VLAAFTRGLIPIICCGESLEE 132 (252)
T ss_dssp HHHHHHHTCEEEEEECCCHHH
T ss_pred HHHHHHCCCEEEEEcCCcHHH
Confidence 678899999999999988774
No 431
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=34.98 E-value=37 Score=21.28 Aligned_cols=36 Identities=14% Similarity=0.092 Sum_probs=27.3
Q ss_pred HHHHHHHHHhcCCcEEEeec-cChhhHHHHHHHHHhCCCeE
Q 035377 19 APQLIATTVNSGVLHFAVNG-VSEEDWNLVKDMSERHPSVI 58 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~-~~~~~~~~~~~l~~~~~~i~ 58 (66)
=.++++++...|+ ++.++ ++.+.+..++++++. | |+
T Consensus 156 G~~vV~eMnrlGm--ivDlSH~s~~t~~dvl~~s~~-P-ia 192 (318)
T 3neh_A 156 GKDIIHLLNERKV--FTDVSHLSVKAFWETLEQAEF-V-IA 192 (318)
T ss_dssp HHHHHHHHHHHTC--EEECTTBCHHHHHHHHHHCSS-E-EE
T ss_pred hHHHHHHHHHcCC--eEEcCCCCHHHHHHHHHhcCC-C-cc
Confidence 4689999999998 77766 567778888888753 6 54
No 432
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=34.75 E-value=34 Score=21.21 Aligned_cols=35 Identities=9% Similarity=0.020 Sum_probs=24.8
Q ss_pred CCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHH
Q 035377 11 QDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLV 47 (66)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~ 47 (66)
...+|.+.++.+.+.+++.|++.+++ ++++++..+
T Consensus 11 ~~~Ey~~Rl~rlr~~m~~~glDalli--~~~~ni~YL 45 (377)
T 4fkc_A 11 GSMDYKRRIHKFQAHFGKKGFEGALV--APGSNFYYL 45 (377)
T ss_dssp SSSCHHHHHHHHHHHHHHTTCCEEEE--CSSHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHCCCCEEEE--CCChhheee
Confidence 34556666788889999999998875 355665543
No 433
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=34.74 E-value=71 Score=18.78 Aligned_cols=47 Identities=11% Similarity=0.149 Sum_probs=28.6
Q ss_pred CHHHHHHHHHh--cCCcEEEeecc-----ChhhHHHHHHHHHh----CC-CeEeeeeec
Q 035377 18 KAPQLIATTVN--SGVLHFAVNGV-----SEEDWNLVKDMSER----HP-SVIPCFGVH 64 (66)
Q Consensus 18 ~~~~~~~~~~~--~gv~~~~~~~~-----~~~~~~~~~~l~~~----~~-~i~~~~GiH 64 (66)
.++++++.+.+ .+++.++..|- ..++++.+.++.++ .+ .++...|=|
T Consensus 52 ~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~~v~GNH 110 (330)
T 3ib7_A 52 RLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH 110 (330)
T ss_dssp HHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEECCCTT
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEeCCCC
Confidence 36667777776 68888877773 13445555544432 12 277777766
No 434
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=34.69 E-value=73 Score=19.37 Aligned_cols=34 Identities=9% Similarity=-0.001 Sum_probs=23.1
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
..+...+++++.++.|+.-.++.+......+..+
T Consensus 180 l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l 213 (317)
T 4eze_A 180 LSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLK 213 (317)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred ECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHH
Confidence 3567889999999999886666554443333333
No 435
>2x5e_A UPF0271 protein PA4511; unknown function; HET: CIT; 2.30A {Pseudomonas aeruginosa} PDB: 2xu2_A*
Probab=34.64 E-value=46 Score=20.40 Aligned_cols=43 Identities=14% Similarity=0.205 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHhcCCcEEEeecc---ChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGV---SEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~---~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
++-++++.-...++| .+|. ++....+..++++++. -++|-||.
T Consensus 25 G~D~~lm~~VtSANI----ACGfHAGDp~~M~~Tv~lA~~~g---V~IGAHPg 70 (252)
T 2x5e_A 25 GDDVHSMPLVDQANL----ACGFHAGDPLTMRRAVELAVRHG---VSIGAHPA 70 (252)
T ss_dssp SCHHHHGGGCSEEEE----ECSSSSCCHHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CCHHHHHHhhhhhhh----hccccCCCHHHHHHHHHHHHHcC---CeeecCCC
Confidence 454566665444443 3443 7888999999999975 46788883
No 436
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=34.60 E-value=36 Score=20.70 Aligned_cols=21 Identities=19% Similarity=0.202 Sum_probs=18.5
Q ss_pred HHHHHhcCCcEEEeeccChhh
Q 035377 23 IATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 23 ~~~~~~~gv~~~~~~~~~~~~ 43 (66)
++.|.++|+.-++|+|-++++
T Consensus 115 v~~Al~~GL~pI~CvGEtlee 135 (256)
T 1aw2_A 115 FAFLKENGLTPVLCIGESDAQ 135 (256)
T ss_dssp HHHHHHHTCEEEEEECCCHHH
T ss_pred HHHHHHCCCEEEEEcCCcHHH
Confidence 678899999999999988776
No 437
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii} SCOP: c.6.2.5
Probab=34.58 E-value=46 Score=20.42 Aligned_cols=56 Identities=13% Similarity=0.134 Sum_probs=33.9
Q ss_pred EeeccCCCC--C-cCCCCHHHHHHHHHhcCCcEEEeecc---ChhhHHHHHHHHHhCCCeEeeeeecCC
Q 035377 4 FDAHCHLQD--P-RIFHKAPQLIATTVNSGVLHFAVNGV---SEEDWNLVKDMSERHPSVIPCFGVHPW 66 (66)
Q Consensus 4 iDsH~Hl~~--~-~~~~~~~~~~~~~~~~gv~~~~~~~~---~~~~~~~~~~l~~~~~~i~~~~GiHP~ 66 (66)
||.=|=|.. . +-.++-++++.-...++| .+|. ++....+..++++++. -++|-||.
T Consensus 3 iDLN~DlGEsfG~w~~G~D~~lm~~VtSANI----ACGfHAGDp~~M~~tv~lA~~~g---V~IGAHPg 64 (255)
T 1v6t_A 3 VDLNSDLGESFGRYKLGLDEEVMKYITSANV----ACGWHAGDPLVMRKTVRLAKEND---VQVGAHPG 64 (255)
T ss_dssp EEEEEEECCCBTTBCCSCHHHHTTTCSEEEE----ECSSSSCCHHHHHHHHHHHHHTT---CEEEEECC
T ss_pred eeeeccCCCCCCCCCCCCHHHHHHHhhhhhh----hccccCCCHHHHHHHHHHHHHcC---CeEecCCC
Confidence 555555532 1 112454566664444433 3443 7888999999999975 46788883
No 438
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=34.41 E-value=95 Score=20.57 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCcEEEeecc--ChhhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFAVNGV--SEEDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~--~~~~~~~~~~l~~~~~ 55 (66)
..+.++++-+.|++ +++++. ..++-+++.++++++.
T Consensus 49 v~~~v~e~~~~Gv~-~viis~Gf~~~~~~~l~~~A~~~g 86 (480)
T 3dmy_A 49 AAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKG 86 (480)
T ss_dssp HHHHHHHHHHTTCE-EEECCCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCC-EEEECCCCCHHHHHHHHHHHHHcC
Confidence 56788899999998 666543 3556677888898873
No 439
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=34.39 E-value=84 Score=19.56 Aligned_cols=48 Identities=13% Similarity=0.090 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
+++++ +++|.+.|++.+++=..++++.+++.+.....-.+..+=|+-|
T Consensus 217 dtlde-~~eAl~aGaD~I~LDn~~~~~l~~av~~i~~~v~ieaSGGI~~ 264 (298)
T 3gnn_A 217 ETLDQ-LRTALAHGARSVLLDNFTLDMMRDAVRVTEGRAVLEVSGGVNF 264 (298)
T ss_dssp SSHHH-HHHHHHTTCEEEEEESCCHHHHHHHHHHHTTSEEEEEESSCST
T ss_pred CCHHH-HHHHHHcCCCEEEECCCCHHHHHHHHHHhCCCCeEEEEcCCCH
Confidence 35554 4556667888777666788888887776532222555666654
No 440
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=34.38 E-value=70 Score=18.65 Aligned_cols=31 Identities=6% Similarity=0.060 Sum_probs=21.9
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHH
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLV 47 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~ 47 (66)
+...+.++++++.|+.-+++.|-.+......
T Consensus 29 ~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~ 59 (275)
T 1xvi_A 29 QPAAPWLTRLREANVPVILCSSKTSAEMLYL 59 (275)
T ss_dssp CTTHHHHHHHHHTTCCEEEECSSCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence 3457889999999998777777555554443
No 441
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=34.32 E-value=70 Score=18.57 Aligned_cols=40 Identities=8% Similarity=-0.017 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHhcCCcEEEeecc-----ChhhHHHHHHHHHhCCC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGV-----SEEDWNLVKDMSERHPS 56 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~-----~~~~~~~~~~l~~~~~~ 56 (66)
.++++.++.+++.|++.+=+... +.++.+++.++.+++.-
T Consensus 21 ~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl 65 (290)
T 3tva_A 21 AGLGVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGI 65 (290)
T ss_dssp SSSSBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCC
Confidence 45677889999999987654432 24557777888888753
No 442
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=34.24 E-value=66 Score=23.12 Aligned_cols=29 Identities=14% Similarity=0.140 Sum_probs=22.3
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhh
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~ 43 (66)
..++..+.+++++++|++-+++.|-++..
T Consensus 605 ~r~~~~~aI~~l~~aGI~vvmiTGd~~~t 633 (1034)
T 3ixz_A 605 PRATVPDAVLKCRTAGIRVIMVTGDHPIT 633 (1034)
T ss_pred CchhHHHHHHHHHHcCCeEEEEeCCCHHH
Confidence 34567889999999999987777755443
No 443
>3gag_A Putative NADH dehydrogenase, NADPH nitroreductase; FMN-dependent nitroreductase-like fold, structural genomics; HET: MSE FMN; 1.70A {Streptococcus mutans} SCOP: d.90.1.0
Probab=34.06 E-value=14 Score=20.67 Aligned_cols=44 Identities=18% Similarity=0.182 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC-CCeEeeeee
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH-PSVIPCFGV 63 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~-~~i~~~~Gi 63 (66)
..++-.|.+.|+..+..-|.+.+...+.+.+-+.+ +-...++|+
T Consensus 141 ~nl~LaA~~~Glgsc~~~~~~~~~v~~~L~lp~~~~~~~~i~lGy 185 (206)
T 3gag_A 141 MNLMQVVRVYGYDSVPMRGVDFDAIKTYLDMPNGWEPILMLPVGK 185 (206)
T ss_dssp HHHHHHHHHTTCEECCBCCSCHHHHHHHTTCCTTEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCeeeecccCHHHHHHHhCcCCCcceEEEEEeec
Confidence 35566788899988877676666666665553322 223456674
No 444
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=33.98 E-value=65 Score=18.11 Aligned_cols=28 Identities=7% Similarity=0.194 Sum_probs=19.6
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChh
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEE 42 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~ 42 (66)
..+...+++++.++.|+.-.++.+...+
T Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~ 142 (243)
T 2hsz_A 115 LYPNVKETLEALKAQGYILAVVTNKPTK 142 (243)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEECCcHH
Confidence 3466889999999999876555444433
No 445
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=33.98 E-value=22 Score=22.36 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHhcCCcEEEee
Q 035377 17 HKAPQLIATTVNSGVLHFAVN 37 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~ 37 (66)
+++.+++++|.+.||+-++.+
T Consensus 77 ~df~~lv~~aH~~Gi~VilD~ 97 (496)
T 4gqr_A 77 DEFRNMVTRCNNVGVRIYVDA 97 (496)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEE
Confidence 368899999999999877754
No 446
>1xhk_A Putative protease LA homolog; LON protease, ATP dependent, catalytic DYAD, hydrolase; HET: MES; 1.90A {Methanocaldococcus jannaschii} SCOP: d.14.1.10
Probab=33.94 E-value=64 Score=18.26 Aligned_cols=26 Identities=12% Similarity=0.086 Sum_probs=19.9
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhh
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~ 43 (66)
.+.+-+..|++.|+++++++-.+.++
T Consensus 136 Gi~~ki~~A~~~G~~~viiP~~N~~e 161 (187)
T 1xhk_A 136 GVNEKIEAAKRYGFKRVIIPEANMID 161 (187)
T ss_dssp CHHHHHHHHHHTTCSEEEEEGGGGGG
T ss_pred CHHHHHHHHHHcCCCEEEeccchhhh
Confidence 47777888999999998888655444
No 447
>3ge5_A Putative NAD(P)H:FMN oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: FMN UNL; 1.70A {Porphyromonas gingivalis W83}
Probab=33.90 E-value=26 Score=19.94 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC-CCeEeeeee
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH-PSVIPCFGV 63 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~-~~i~~~~Gi 63 (66)
...++-.|.+.|+..+..-+.+.+...+.+.+-+.+ +-...++|.
T Consensus 128 ~~nl~LaA~~lGLgsc~~~~~~~~~v~~~L~lp~~~~~~~~i~iGy 173 (198)
T 3ge5_A 128 MTYMMLEAHSLGLGCTWVCAFDQALCSEIFDIPSHMTPVSILALGY 173 (198)
T ss_dssp HHHHHHHHHHTTCEEEEECCSCHHHHHHHTTCCTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHCCCCEEEECccCHHHHHHHhCcCCCceEEEEEEEeC
Confidence 455677889999998887676665555555543322 123446674
No 448
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=33.90 E-value=71 Score=18.54 Aligned_cols=39 Identities=13% Similarity=0.079 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHhcCCcEEEeec-----cChhhHHHHHHHHHhCC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNG-----VSEEDWNLVKDMSERHP 55 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~-----~~~~~~~~~~~l~~~~~ 55 (66)
.++++.++.+.+.|++.+=+.. .+.++.+++.++.+++.
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~g 60 (294)
T 3vni_A 17 ADYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNG 60 (294)
T ss_dssp CCHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcC
Confidence 4799999999999999865442 24566778888888875
No 449
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=33.86 E-value=40 Score=20.75 Aligned_cols=44 Identities=16% Similarity=0.263 Sum_probs=29.0
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC-CeEeeeee
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP-SVIPCFGV 63 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~-~i~~~~Gi 63 (66)
..++-.|.+.|+..+..-|.+.+...+++.+-+.+. -...++|+
T Consensus 246 ~nl~LaA~~~GLgs~~~~~~~~~~v~~~L~lP~~~~~~~~ialGy 290 (322)
T 4eo3_A 246 GNLLVQATQMGLVAHPVAGYDPVKVKEILKIPEDHVLITLIAVGY 290 (322)
T ss_dssp HHHHHHHHHTTCEEEEECCSCHHHHHHHHTCCTTSEEEEEEEEEC
T ss_pred HHHHHHHHHcCcCEEEcCccCHHHHHHHcCcCCCCEEEEEEEEeC
Confidence 456678889999988777777766666666544331 23346774
No 450
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=33.70 E-value=56 Score=17.27 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=25.1
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
.+.++++...|..++++-+-+.+++.++.+.+++
T Consensus 40 ~~~~~~W~~~g~~kiVlk~~~e~~l~~l~~~a~~ 73 (117)
T 1rlk_A 40 RDVFNEWYDEGQRKIVVKVNDLDEIMEIKRMADS 73 (117)
T ss_dssp HHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 4567788888988887766677888877766553
No 451
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=33.63 E-value=38 Score=22.08 Aligned_cols=21 Identities=10% Similarity=0.069 Sum_probs=18.8
Q ss_pred CHHHHHHHHHhcCCcEEEeec
Q 035377 18 KAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~ 38 (66)
|.+++++.++++|.+.++.++
T Consensus 79 Dp~~Wa~~~k~AGakyvvlTa 99 (450)
T 2wvv_A 79 DAKKWAKMAKEMGTKYVKITT 99 (450)
T ss_dssp CHHHHHHHHHHHTCSEEEEEE
T ss_pred CHHHHHHHHHHcCCcEEEEEE
Confidence 789999999999999988764
No 452
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=33.61 E-value=72 Score=18.52 Aligned_cols=45 Identities=9% Similarity=0.091 Sum_probs=24.7
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeecc-ChhhHHHHHHHHHhC
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGV-SEEDWNLVKDMSERH 54 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~-~~~~~~~~~~l~~~~ 54 (66)
+.|.|.| |. ...+.+.+.+.|+..+.+-+. ..+..+.+.+.++++
T Consensus 62 flDlKl~-Di------p~t~~~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~ 107 (221)
T 3exr_A 62 VADTKCA-DA------GGTVAKNNAVRGADWMTCICSATIPTMKAARKAIEDI 107 (221)
T ss_dssp EEEEEEC-SC------HHHHHHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHH
T ss_pred EEEEEee-cc------HHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHhc
Confidence 5788877 53 344445566677765443332 334455555555543
No 453
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=33.47 E-value=1.1e+02 Score=22.37 Aligned_cols=46 Identities=11% Similarity=0.065 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh---CCC-eEeeeee
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER---HPS-VIPCFGV 63 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~---~~~-i~~~~Gi 63 (66)
++.+++++..++.||+.++++|.+ .++..+.+|++. ||. -.+.+|+
T Consensus 675 ~~~~~i~~~l~~~~Id~LvvIGGd-gS~~~a~~L~~~~~~y~~~~I~vVGI 724 (989)
T 3opy_A 675 DDMGTVAYYFQQYKFDGLIIIGGF-EAFTALYELDAARAQYPIFNIPMCCL 724 (989)
T ss_dssp GGHHHHHHHHHHHTCSEEEEEESH-HHHHHHHHHHHHTTTCGGGCSCEEEE
T ss_pred hhHHHHHHHHHHcCCCEEEEeCCc-hHHHHHHHHHHHHhhCCCcCCcEEec
Confidence 367788889999999999999964 566666777653 442 2345554
No 454
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=33.42 E-value=57 Score=22.67 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=24.0
Q ss_pred eeccCCCCCcC-------CCCHHHHHHHHHhcCCcEEEeec
Q 035377 5 DAHCHLQDPRI-------FHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 5 DsH~Hl~~~~~-------~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
|-+|||+...+ ++.+.++.+.+.+++|.-++++.
T Consensus 261 dg~Chl~~~~y~~s~~~DyPS~~ql~~~l~~~~I~~ifavt 301 (687)
T 3k6s_B 261 DGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVT 301 (687)
T ss_dssp CSCCCCSSSBCSSGGGSCCCCGGGHHHHHHHTTCBCCEEEC
T ss_pred CCccccCCCccccccccCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 66789863222 23478888999999998776664
No 455
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=33.38 E-value=60 Score=17.58 Aligned_cols=34 Identities=6% Similarity=0.060 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
..+...++++..++.|+.-.++.+...+..+..+
T Consensus 87 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l 120 (226)
T 3mc1_A 87 VYDGIEALLSSLKDYGFHLVVATSKPTVFSKQIL 120 (226)
T ss_dssp BCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH
Confidence 4567889999999999876665554444444333
No 456
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=33.31 E-value=49 Score=23.71 Aligned_cols=33 Identities=9% Similarity=-0.069 Sum_probs=24.8
Q ss_pred cCCCCHHHHHHHHHhcCCcEEEeeccChhhHHH
Q 035377 14 RIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNL 46 (66)
Q Consensus 14 ~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~ 46 (66)
+..++..+.+++++++||+-.++.|-++.....
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~a 567 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARE 567 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHH
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHH
Confidence 345678899999999999877777766554443
No 457
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=33.19 E-value=83 Score=21.87 Aligned_cols=29 Identities=24% Similarity=0.289 Sum_probs=22.0
Q ss_pred cCCCCHHHHHHHHHhcCCcEEEeeccChh
Q 035377 14 RIFHKAPQLIATTVNSGVLHFAVNGVSEE 42 (66)
Q Consensus 14 ~~~~~~~~~~~~~~~~gv~~~~~~~~~~~ 42 (66)
+..++..+.++++++.|++-.++.|-+..
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~ 582 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKR 582 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHH
Confidence 35678899999999999987766664443
No 458
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=33.13 E-value=72 Score=18.35 Aligned_cols=39 Identities=10% Similarity=0.028 Sum_probs=28.0
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccC----------hhhHHHHHHHHHhCC
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVS----------EEDWNLVKDMSERHP 55 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~----------~~~~~~~~~l~~~~~ 55 (66)
.++++.++.+.+.|++.+=+...+ .++.+++.++.+++.
T Consensus 12 ~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 60 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH 60 (285)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcC
Confidence 579999999999999876542212 246667777777764
No 459
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=33.08 E-value=54 Score=19.76 Aligned_cols=13 Identities=8% Similarity=0.054 Sum_probs=5.6
Q ss_pred HHhcCCcEEEeec
Q 035377 26 TVNSGVLHFAVNG 38 (66)
Q Consensus 26 ~~~~gv~~~~~~~ 38 (66)
++..|-+.+++++
T Consensus 119 a~~~GAD~ilLi~ 131 (251)
T 1i4n_A 119 ASSVGADAILIIA 131 (251)
T ss_dssp HHHTTCSEEEEEG
T ss_pred HHHcCCCEEEEec
Confidence 4444444433333
No 460
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=32.95 E-value=41 Score=23.89 Aligned_cols=29 Identities=21% Similarity=0.137 Sum_probs=22.6
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhh
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEED 43 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~ 43 (66)
..++..+.+++++++||+-.++.|-+...
T Consensus 489 ~R~~a~~aI~~l~~aGI~v~MiTGD~~~t 517 (885)
T 3b8c_A 489 PRHDSAETIRRALNLGVNVKMITGDQLAI 517 (885)
T ss_dssp CCHHHHHHHHHHHHTTCCCEEEESSCHHH
T ss_pred cchhHHHHHHHHHHcCCcEEEEcCCChHH
Confidence 45678899999999999877777755543
No 461
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=32.95 E-value=61 Score=17.47 Aligned_cols=46 Identities=13% Similarity=0.086 Sum_probs=28.4
Q ss_pred HHHHHHHHHhcCC--cEEEeeccChhhHHHHHHHHHhCCC-eEeeeeecC
Q 035377 19 APQLIATTVNSGV--LHFAVNGVSEEDWNLVKDMSERHPS-VIPCFGVHP 65 (66)
Q Consensus 19 ~~~~~~~~~~~gv--~~~~~~~~~~~~~~~~~~l~~~~~~-i~~~~GiHP 65 (66)
+.++++...+.++ ++++++|.+..-.- ++.++.++|. +...+.+-|
T Consensus 98 ~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~-a~~~a~~~~~~v~~~i~~~~ 146 (232)
T 1fj2_A 98 IKALIDQEVKNGIPSNRIILGGFSQGGAL-SLYTALTTQQKLAGVTALSC 146 (232)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHH-HHHHHTTCSSCCSEEEEESC
T ss_pred HHHHHHHHhcCCCCcCCEEEEEECHHHHH-HHHHHHhCCCceeEEEEeec
Confidence 3444555544577 67889998877654 4556666764 555555544
No 462
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=32.81 E-value=77 Score=19.27 Aligned_cols=33 Identities=6% Similarity=0.137 Sum_probs=16.3
Q ss_pred HHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 21 QLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 21 ~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
+++.+|.++|.. +++ ++.+.++.+++.+++++.
T Consensus 96 ~~~~~al~aGkh-Vl~EKP~a~~~~e~~~l~~~a~~~ 131 (330)
T 4ew6_A 96 EAAYKALVAGKH-VFLEKPPGATLSEVADLEALANKQ 131 (330)
T ss_dssp HHHHHHHHTTCE-EEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCc-EEEeCCCCCCHHHHHHHHHHHHhc
Confidence 344445555532 222 244556666666666654
No 463
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=32.68 E-value=72 Score=18.25 Aligned_cols=38 Identities=11% Similarity=0.158 Sum_probs=24.1
Q ss_pred CHHHHHHHHHhcCCcEEEeecc------ChhhHHHHHHHHHhCC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGV------SEEDWNLVKDMSERHP 55 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~------~~~~~~~~~~l~~~~~ 55 (66)
++++.++.+++.|++++=+... +.++.+++.++.+++.
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~g 74 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHK 74 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcC
Confidence 6777888888888776543322 3445566666666664
No 464
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=32.63 E-value=69 Score=18.54 Aligned_cols=32 Identities=16% Similarity=0.014 Sum_probs=23.1
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
+...+.++++++.|+.-+++.|-.+....+.+
T Consensus 24 ~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l 55 (246)
T 3f9r_A 24 DEMRALIKRARGAGFCVGTVGGSDFAKQVEQL 55 (246)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHh
Confidence 44667899999999987777776666544433
No 465
>4gop_A Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis}
Probab=32.61 E-value=11 Score=20.07 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=17.1
Q ss_pred cChhhHHHHHHHHHhCCCeEe
Q 035377 39 VSEEDWNLVKDMSERHPSVIP 59 (66)
Q Consensus 39 ~~~~~~~~~~~l~~~~~~i~~ 59 (66)
.+.+.+.++.+++.++|.+|.
T Consensus 91 ~D~~~yn~lv~l~~~f~~lF~ 111 (114)
T 4gop_A 91 VDLTLVENVVQISAAFPNLFS 111 (114)
T ss_dssp CCHHHHHHHHHHHHHCHHHHC
T ss_pred cCHHHHHHHHHHHhcCchhcc
Confidence 367788899999999987764
No 466
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=32.60 E-value=84 Score=19.02 Aligned_cols=17 Identities=6% Similarity=-0.035 Sum_probs=9.2
Q ss_pred ccChhhHHHHHHHHHhC
Q 035377 38 GVSEEDWNLVKDMSERH 54 (66)
Q Consensus 38 ~~~~~~~~~~~~l~~~~ 54 (66)
+.++++.+++.+++++.
T Consensus 107 a~~~~ea~~l~~~a~~~ 123 (318)
T 3oa2_A 107 VPTPEMLDQLAVIERET 123 (318)
T ss_dssp CSCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh
Confidence 34455555555555554
No 467
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=32.48 E-value=32 Score=21.29 Aligned_cols=37 Identities=14% Similarity=0.029 Sum_probs=22.5
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHH-HHHHHHHhC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWN-LVKDMSERH 54 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~-~~~~l~~~~ 54 (66)
...++-++|+++|+..+..+|.+|.-.. .+..+.++.
T Consensus 113 ~~~~l~~~a~~~g~~~i~~~G~~PG~~~~~a~~~~~~~ 150 (365)
T 3abi_A 113 NPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQEL 150 (365)
T ss_dssp CGGGGHHHHHHTTCEEECCCBTTTBHHHHHHHHHHHHS
T ss_pred hhhhhhhhhccCCceeeecCCCCCchHHHHHHHHHHhc
Confidence 4556667778888776666677665433 233445554
No 468
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=32.37 E-value=76 Score=18.43 Aligned_cols=16 Identities=6% Similarity=0.096 Sum_probs=12.0
Q ss_pred CHHHHHHHHHhcCCcE
Q 035377 18 KAPQLIATTVNSGVLH 33 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~ 33 (66)
+.++.++.+++.|+..
T Consensus 38 ~~~~~l~~~~~~G~N~ 53 (387)
T 4awe_A 38 DIEKGMTAARAAGLTV 53 (387)
T ss_dssp HHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHhCCCCE
Confidence 5677788888888764
No 469
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=32.36 E-value=77 Score=18.48 Aligned_cols=48 Identities=15% Similarity=0.150 Sum_probs=27.3
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeecc-ChhhHHHHHHHHHhC
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGV-SEEDWNLVKDMSERH 54 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~-~~~~~~~~~~l~~~~ 54 (66)
+.|.|.| |.+. .....++.+.+.|.+.+-+-.. ..+..+.+++.++++
T Consensus 58 ~lD~kl~-Dip~---t~~~~~~~~~~~Gad~vtvH~~~g~~~l~~~~~~~~~~ 106 (239)
T 1dbt_A 58 FLDLKLH-DIPT---TVNKAMKRLASLGVDLVNVHAAGGKKMMQAALEGLEEG 106 (239)
T ss_dssp EEEEEEC-SCHH---HHHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHH
T ss_pred EEEeccc-cchH---HHHHHHHHHHhcCCCEEEEeCcCCHHHHHHHHHHHHhh
Confidence 5788887 5322 1334667777888876544332 223345666666554
No 470
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=32.34 E-value=12 Score=26.04 Aligned_cols=11 Identities=27% Similarity=0.323 Sum_probs=9.1
Q ss_pred EeeccCCCCCc
Q 035377 4 FDAHCHLQDPR 14 (66)
Q Consensus 4 iDsH~Hl~~~~ 14 (66)
||+|+|++..-
T Consensus 250 VDlHvHLsg~m 260 (701)
T 2a3l_A 250 VDTHVHHSACM 260 (701)
T ss_dssp EEEEEETTTCS
T ss_pred cceeecccCCC
Confidence 89999998644
No 471
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=32.19 E-value=85 Score=18.91 Aligned_cols=11 Identities=9% Similarity=0.184 Sum_probs=4.9
Q ss_pred HHHHHHHhcCC
Q 035377 21 QLIATTVNSGV 31 (66)
Q Consensus 21 ~~~~~~~~~gv 31 (66)
++++.+++.|+
T Consensus 108 ~l~~~a~~~g~ 118 (336)
T 2p2s_A 108 AVQRRVAETGR 118 (336)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHcCC
Confidence 34444444444
No 472
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=32.19 E-value=1.1e+02 Score=20.01 Aligned_cols=43 Identities=12% Similarity=-0.005 Sum_probs=22.1
Q ss_pred HHHHHHHhcCCcEEEeec----cChhhHHHHHHHHHhCCCeEeeeeecC
Q 035377 21 QLIATTVNSGVLHFAVNG----VSEEDWNLVKDMSERHPSVIPCFGVHP 65 (66)
Q Consensus 21 ~~~~~~~~~gv~~~~~~~----~~~~~~~~~~~l~~~~~~i~~~~GiHP 65 (66)
++++++.+.|...+.+.- ..|.+..++++..++...+ -+|+|+
T Consensus 184 ~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~~--~i~~H~ 230 (423)
T 3ivs_A 184 SLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVSC--DIECHF 230 (423)
T ss_dssp HHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCSS--EEEEEE
T ss_pred HHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcCC--eEEEEE
Confidence 455666667776654332 2456665555443333333 356664
No 473
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=31.87 E-value=66 Score=20.86 Aligned_cols=36 Identities=6% Similarity=0.037 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCcEEEeeccCh---h-----hHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSE---E-----DWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~---~-----~~~~~~~l~~~~ 54 (66)
..++++++.+.|++.+++++... . ..+++.+.++++
T Consensus 77 ~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~ 120 (457)
T 2csu_A 77 VKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKY 120 (457)
T ss_dssp HHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHc
Confidence 66788999999999887765322 1 156677778775
No 474
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=31.87 E-value=84 Score=18.77 Aligned_cols=43 Identities=16% Similarity=0.178 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcCCcEEEe--eccChhhHHHHHHHHHhCCCeEeeee
Q 035377 19 APQLIATTVNSGVLHFAV--NGVSEEDWNLVKDMSERHPSVIPCFG 62 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~--~~~~~~~~~~~~~l~~~~~~i~~~~G 62 (66)
..+++.++.++|..-++- ++.+.++.+++.+++++.+ +...+|
T Consensus 78 h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g-~~~~~~ 122 (319)
T 1tlt_A 78 HFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKK-LTLMVG 122 (319)
T ss_dssp HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTT-CCEEEE
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC-CeEEEe
Confidence 345666777777532322 3457888888888888764 334444
No 475
>1vfr_A NAD(P)H\:FMN oxidoreductase; bioluminescence; HET: FMN; 1.80A {Aliivibrio fischeri} SCOP: d.90.1.1 PDB: 1v5y_A* 1v5z_A*
Probab=31.84 E-value=33 Score=19.16 Aligned_cols=45 Identities=11% Similarity=0.031 Sum_probs=27.6
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHH-HhC-CCeEeeeee
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMS-ERH-PSVIPCFGV 63 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~-~~~-~~i~~~~Gi 63 (66)
...++-.|.+.|+..+..-|.+.+...+.+.+- +.+ +-...++|+
T Consensus 147 ~~nl~LaA~~~Glgs~~~~~~~~~~v~~~l~lp~~~~~~~~~i~lGy 193 (218)
T 1vfr_A 147 LGNALHTLARLNIDSTTMEGIDPELLSEIFADELKGYECHVALAIGY 193 (218)
T ss_dssp HHHHHHHHHHHTCEEEEECCSCHHHHHHHTTTTTTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcccccccCHHHHHHHhCCCcccceEEEEEEeec
Confidence 345666788899998877666665555555554 322 223346674
No 476
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=31.84 E-value=46 Score=18.62 Aligned_cols=45 Identities=16% Similarity=0.126 Sum_probs=26.9
Q ss_pred CHHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC-CeEeeeeec
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP-SVIPCFGVH 64 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~-~i~~~~GiH 64 (66)
.++++++.+.+.+++.++..| +.-+. +.++..++.+ .++...|=|
T Consensus 40 ~l~~~l~~~~~~~~D~ii~~G-Dl~~~-~~~~~l~~l~~~~~~V~GNh 85 (190)
T 1s3l_A 40 NIRKAIEIFNDENVETVIHCG-DFVSL-FVIKEFENLNANIIATYGNN 85 (190)
T ss_dssp HHHHHHHHHHHSCCSEEEECS-CCCST-HHHHHGGGCSSEEEEECCTT
T ss_pred HHHHHHHHHhhcCCCEEEECC-CCCCH-HHHHHHHhcCCCEEEEeCCC
Confidence 366777877777888888777 33222 2344444333 366676655
No 477
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=31.81 E-value=75 Score=18.19 Aligned_cols=32 Identities=6% Similarity=0.059 Sum_probs=22.8
Q ss_pred CCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 17 HKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
+...+.++++++.|+.-+++.|-.........
T Consensus 25 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~ 56 (279)
T 4dw8_A 25 SRNRETLIRIQEQGIRLVLASGRPTYGIVPLA 56 (279)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 34667889999999987777776665554433
No 478
>2vo9_A EAD500, L-alanyl-D-glutamate peptidase; cell WALL biogenesis/degradation, secreted, cell WALL, hydro; 1.8A {Bacteriophage A500} SCOP: d.65.1.5
Probab=31.72 E-value=74 Score=18.07 Aligned_cols=22 Identities=18% Similarity=0.350 Sum_probs=16.8
Q ss_pred CHHHHHHHHHhcCCcEEEeecc
Q 035377 18 KAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
.+.+++++|++.|+.-.+.-|.
T Consensus 40 al~~m~~~a~~~Gi~l~i~sgy 61 (179)
T 2vo9_A 40 KTRNVIKKMAKEGIYLCVAQGY 61 (179)
T ss_dssp HHHHHHHHHHTTTCCEEEEECC
T ss_pred HHHHHHHHHHHCCCeEEEEEEE
Confidence 4678889999999986655554
No 479
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=31.71 E-value=65 Score=17.46 Aligned_cols=24 Identities=4% Similarity=-0.049 Sum_probs=18.1
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeec
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNG 38 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~ 38 (66)
..+...++++++++.|+.-.++.+
T Consensus 43 ~~pg~~e~L~~L~~~G~~l~i~Tn 66 (176)
T 2fpr_A 43 FEPGVIPQLLKLQKAGYKLVMITN 66 (176)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEE
T ss_pred CCccHHHHHHHHHHCCCEEEEEEC
Confidence 346788999999999987555444
No 480
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=31.64 E-value=69 Score=17.71 Aligned_cols=33 Identities=9% Similarity=0.138 Sum_probs=21.7
Q ss_pred CCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 16 FHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 16 ~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
.+...+++++.++.|+.-.++.+......+..+
T Consensus 107 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l 139 (240)
T 2no4_A 107 YPDAAETLEKLKSAGYIVAILSNGNDEMLQAAL 139 (240)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 467888999999999876655554443333333
No 481
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=31.64 E-value=95 Score=19.31 Aligned_cols=36 Identities=3% Similarity=0.076 Sum_probs=17.1
Q ss_pred HHHHHHHHhcCCc-EEEeeccChhhHHHHHHHHHhCC
Q 035377 20 PQLIATTVNSGVL-HFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 20 ~~~~~~~~~~gv~-~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
.++++++.++|.. +.++...+.+.++.+.+++.+|.
T Consensus 137 ~~V~eaal~aga~~k~iINdvs~~~~~~~~~~aa~~g 173 (310)
T 2h9a_B 137 AEIFPVIGEALSGRNCLLSSATKDNYKPIVATCMVHG 173 (310)
T ss_dssp HHHHHHHHHHTTTSCCEEEEECTTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCEEEECCCCccHHHHHHHHHhC
Confidence 3455555555543 22222333334555566655553
No 482
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=31.63 E-value=71 Score=18.73 Aligned_cols=15 Identities=13% Similarity=0.195 Sum_probs=10.5
Q ss_pred HHHHHHHhcCCcEEE
Q 035377 21 QLIATTVNSGVLHFA 35 (66)
Q Consensus 21 ~~~~~~~~~gv~~~~ 35 (66)
..+++|++.||....
T Consensus 51 ~~~~~A~~~gIp~~~ 65 (215)
T 3da8_A 51 RAAEIAAEASVPVFT 65 (215)
T ss_dssp HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHcCCCEEE
Confidence 457788888887543
No 483
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=31.57 E-value=49 Score=16.42 Aligned_cols=37 Identities=3% Similarity=-0.064 Sum_probs=15.4
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
...+++.+++.|+..+.+...+.+++..+..+.++..
T Consensus 102 l~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~G 138 (150)
T 3t9y_A 102 LADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNG 138 (150)
T ss_dssp HHHHHHHHHHTTCSCEEECCCCCC------------C
T ss_pred HHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHcC
Confidence 5566777888898877554321155555666666543
No 484
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=31.46 E-value=90 Score=19.00 Aligned_cols=47 Identities=9% Similarity=0.166 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcCCcEEEeecc----ChhhHHHHHH-HHHhCCCeE-eeeeecC
Q 035377 19 APQLIATTVNSGVLHFAVNGV----SEEDWNLVKD-MSERHPSVI-PCFGVHP 65 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~----~~~~~~~~~~-l~~~~~~i~-~~~GiHP 65 (66)
+.++++++.+.|+..+.+.-| .|.+..++++ +.+..|++- .-+|+|.
T Consensus 152 ~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~ 204 (293)
T 3ewb_X 152 LIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHC 204 (293)
T ss_dssp HHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEe
Confidence 345667778888876554322 5666666554 445566542 3467775
No 485
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=31.43 E-value=75 Score=18.06 Aligned_cols=21 Identities=5% Similarity=-0.023 Sum_probs=16.4
Q ss_pred CCHHHHHHHHHhcCCcEEEee
Q 035377 17 HKAPQLIATTVNSGVLHFAVN 37 (66)
Q Consensus 17 ~~~~~~~~~~~~~gv~~~~~~ 37 (66)
+...+.++++++.|+.-+++.
T Consensus 36 ~~~~~~l~~l~~~G~~~~~aT 56 (271)
T 1vjr_A 36 PGSLEFLETLKEKNKRFVFFT 56 (271)
T ss_dssp TTHHHHHHHHHHTTCEEEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEE
Confidence 456678899999999876665
No 486
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=31.37 E-value=68 Score=17.59 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=21.7
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
..+...+++++.++.|+.-.++.+...+.....+
T Consensus 109 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l 142 (247)
T 3dv9_A 109 RMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRL 142 (247)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSCC---CHHHH
T ss_pred CCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHH
Confidence 3567889999999999886665554444344333
No 487
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=31.21 E-value=70 Score=17.64 Aligned_cols=34 Identities=6% Similarity=0.131 Sum_probs=22.4
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 15 IFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
..+...+++++.++.|+.-.++.+...+..+..+
T Consensus 111 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l 144 (240)
T 3sd7_A 111 IYENMKEILEMLYKNGKILLVATSKPTVFAETIL 144 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 3467889999999999876655554444333333
No 488
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=31.21 E-value=96 Score=20.35 Aligned_cols=27 Identities=15% Similarity=0.224 Sum_probs=14.4
Q ss_pred CCcEEEeeccChhhHHHHHHHHHhCCC
Q 035377 30 GVLHFAVNGVSEEDWNLVKDMSERHPS 56 (66)
Q Consensus 30 gv~~~~~~~~~~~~~~~~~~l~~~~~~ 56 (66)
|++++.+.|.+-.-=...+++.+++|+
T Consensus 8 ~~k~i~ILGSTGSIGtqtLdVi~~~pd 34 (406)
T 1q0q_A 8 GMKQLTILGSTGSIGCSTLDVVRHNPE 34 (406)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHCTT
T ss_pred CceeEEEEccCcHHHHHHHHHHHhCCC
Confidence 555555555554444555555555554
No 489
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=31.20 E-value=86 Score=18.70 Aligned_cols=34 Identities=12% Similarity=0.084 Sum_probs=18.9
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
.++..++.++|.. +++ ++.++++.+++.+++++.
T Consensus 79 ~~~~~~al~aGkh-Vl~EKPla~~~~ea~~l~~~a~~~ 115 (294)
T 1lc0_A 79 EDYIRQFLQAGKH-VLVEYPMTLSFAAAQELWELAAQK 115 (294)
T ss_dssp HHHHHHHHHTTCE-EEEESCSCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCc-EEEeCCCCCCHHHHHHHHHHHHHh
Confidence 3445555666642 222 344666677777776664
No 490
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=31.06 E-value=67 Score=17.39 Aligned_cols=33 Identities=9% Similarity=-0.003 Sum_probs=22.4
Q ss_pred CCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 16 FHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 16 ~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
.++..+++++.++.|+.-.++.+...+..+..+
T Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l 125 (233)
T 3s6j_A 93 LPGAVELLETLDKENLKWCIATSGGIDTATINL 125 (233)
T ss_dssp CTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHH
Confidence 467889999999999886665554444444333
No 491
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=31.06 E-value=1.6e+02 Score=21.69 Aligned_cols=35 Identities=14% Similarity=0.066 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhC
Q 035377 19 APQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~ 54 (66)
.++.++..++.||+.++++|.+ .++.-+..|++++
T Consensus 293 ~~~~~~~L~~~gId~LvvIGGD-GS~~gA~~L~~e~ 327 (989)
T 3opy_A 293 RLQACYNMVSNGIDALVVCGGD-GSLTGADLFRKEW 327 (989)
T ss_dssp HHHHHHHHHHTTCCEEEEEECH-HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEeCCC-hhhHHHHHHHHHh
Confidence 4567788899999999999964 5666665555433
No 492
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=31.05 E-value=78 Score=18.35 Aligned_cols=15 Identities=27% Similarity=0.326 Sum_probs=7.0
Q ss_pred HHHHHHHHHhcCCcE
Q 035377 19 APQLIATTVNSGVLH 33 (66)
Q Consensus 19 ~~~~~~~~~~~gv~~ 33 (66)
+++.++.+++.|++.
T Consensus 33 ~~~~l~~~~~~G~~~ 47 (301)
T 3cny_A 33 LQQLLSDIVVAGFQG 47 (301)
T ss_dssp HHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHhCCCE
Confidence 444444444444443
No 493
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=31.02 E-value=73 Score=17.78 Aligned_cols=35 Identities=20% Similarity=0.063 Sum_probs=24.5
Q ss_pred HHHHHHHHhcCCcEEEeeccChhhHHHHHHHHHhCC
Q 035377 20 PQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHP 55 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~~~ 55 (66)
.++++..++.|+++++++|.+..-.- ++.++.++|
T Consensus 74 ~~~~~~l~~~~~~~~~lvG~SmGG~i-a~~~a~~~p 108 (247)
T 1tqh_A 74 MNGYEFLKNKGYEKIAVAGLSLGGVF-SLKLGYTVP 108 (247)
T ss_dssp HHHHHHHHHHTCCCEEEEEETHHHHH-HHHHHTTSC
T ss_pred HHHHHHHHHcCCCeEEEEEeCHHHHH-HHHHHHhCC
Confidence 34445556678888999998887665 345677777
No 494
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=30.95 E-value=72 Score=19.05 Aligned_cols=42 Identities=21% Similarity=0.253 Sum_probs=26.0
Q ss_pred eEeeccCCCCCcCCCCHHHHHHHHHhcCCcEEEeeccChhhHHHHH
Q 035377 3 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK 48 (66)
Q Consensus 3 ~iDsH~Hl~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~ 48 (66)
+|| |+=|....-.++++++++++.+.|+..+. +++.-...+.
T Consensus 16 ~ID-hTlL~p~~t~~~i~~lc~eA~~~~~~aVc---V~p~~v~~a~ 57 (231)
T 3ndo_A 16 LVD-HTLLKPEATPSDVTALVDEAADLGVFAVC---VSPPLVSVAA 57 (231)
T ss_dssp TEE-EECCCTTCCHHHHHHHHHHHHHHTCSEEE---ECGGGHHHHH
T ss_pred hcC-cccCCCCCCHHHHHHHHHHHHHhCCcEEE---ECHHHHHHHH
Confidence 445 23354433345788999999999987653 3555555544
No 495
>3ky8_A Putative riboflavin biosynthesis protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE UNL; 2.12A {Shewanella loihica}
Probab=30.95 E-value=65 Score=18.37 Aligned_cols=24 Identities=21% Similarity=0.202 Sum_probs=20.2
Q ss_pred CCCHHHHHHHHHhcCCcEEEeecc
Q 035377 16 FHKAPQLIATTVNSGVLHFAVNGV 39 (66)
Q Consensus 16 ~~~~~~~~~~~~~~gv~~~~~~~~ 39 (66)
..+++++++++++.|+..+++.|.
T Consensus 112 ~~~l~~~l~~L~~~~~~~i~v~GG 135 (197)
T 3ky8_A 112 KGKLVDIIADLNAKGFNELYIDGG 135 (197)
T ss_dssp CSCHHHHHHHHHHTTCCEEEEESH
T ss_pred eCCHHHHHHHHHhCCCCeEEEEeh
Confidence 368999999999999988887774
No 496
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=30.91 E-value=94 Score=19.04 Aligned_cols=45 Identities=4% Similarity=0.012 Sum_probs=29.9
Q ss_pred HHHHHHHhcCCcEEEeeccChhhHHHHHHHHHh-CCC--eEeeeeecC
Q 035377 21 QLIATTVNSGVLHFAVNGVSEEDWNLVKDMSER-HPS--VIPCFGVHP 65 (66)
Q Consensus 21 ~~~~~~~~~gv~~~~~~~~~~~~~~~~~~l~~~-~~~--i~~~~GiHP 65 (66)
+-++++.+.|.+.+++=..++++.+++.+..+. +|+ +..+=|+-|
T Consensus 205 eea~eal~aGaD~I~LDn~~~~~~~~~v~~l~~~~~~v~ieaSGGIt~ 252 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSL 252 (284)
T ss_dssp HHHHHHGGGCCSEEEEETCCHHHHHHHHHHHHHHCTTCEEEEESSCCT
T ss_pred HHHHHHHHcCCCEEEECCCCHHHHHHHHHHhhccCCCeEEEEECCCCH
Confidence 445566668888776666788888887776554 444 555656654
No 497
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=30.90 E-value=92 Score=18.92 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=18.1
Q ss_pred HHHHHHHHhcCCcEEEe---eccChhhHHHHHHHHHhC
Q 035377 20 PQLIATTVNSGVLHFAV---NGVSEEDWNLVKDMSERH 54 (66)
Q Consensus 20 ~~~~~~~~~~gv~~~~~---~~~~~~~~~~~~~l~~~~ 54 (66)
.+++.+|.++|. .+++ ++.+.++.+++.+++++.
T Consensus 96 ~~~~~~al~aGk-hVl~EKPla~~~~ea~~l~~~a~~~ 132 (340)
T 1zh8_A 96 LPFIEKALRKGV-HVICEKPISTDVETGKKVVELSEKS 132 (340)
T ss_dssp HHHHHHHHHTTC-EEEEESSSSSSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCC-cEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 344555555553 2322 244666666666666654
No 498
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=30.87 E-value=26 Score=18.67 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=14.1
Q ss_pred CHHHHHHHHHh-cCCcEEEeeccChhhHHHHHHHHHh
Q 035377 18 KAPQLIATTVN-SGVLHFAVNGVSEEDWNLVKDMSER 53 (66)
Q Consensus 18 ~~~~~~~~~~~-~gv~~~~~~~~~~~~~~~~~~l~~~ 53 (66)
+.++....+.+ .++..++++| +.+-.+.+++++++
T Consensus 61 ~r~~~~l~a~~~~~~~~iIlt~-g~~~~~~i~~~A~~ 96 (139)
T 2ioj_A 61 DRSDLLLTALEMPNVRCLILTG-NLEPVQLVLTKAEE 96 (139)
T ss_dssp TCHHHHHHHTTCTTEEEEEEET-TCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCcEEEEcC-CCCCCHHHHHHHHH
Confidence 33444444443 4444444333 22333334444444
No 499
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=30.86 E-value=91 Score=18.85 Aligned_cols=48 Identities=10% Similarity=-0.032 Sum_probs=30.2
Q ss_pred CHHHHHHHHHhcCCcEEEeecc---ChhhHHHHHHHHHhCCC-eEeeeeecC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGV---SEEDWNLVKDMSERHPS-VIPCFGVHP 65 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~---~~~~~~~~~~l~~~~~~-i~~~~GiHP 65 (66)
.+++...+..++|+.-++.... +.+-.+++.+.+++... +|..-|.-|
T Consensus 72 av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSGAi~ 123 (253)
T 1j5p_A 72 AVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSGAIG 123 (253)
T ss_dssp HHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTTCC
T ss_pred HHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCCccc
Confidence 3666778888899875433221 44445677788888764 766555443
No 500
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=30.83 E-value=22 Score=22.73 Aligned_cols=22 Identities=9% Similarity=0.225 Sum_probs=17.7
Q ss_pred CHHHHHHHHHhcCCcEEEeeccC
Q 035377 18 KAPQLIATTVNSGVLHFAVNGVS 40 (66)
Q Consensus 18 ~~~~~~~~~~~~gv~~~~~~~~~ 40 (66)
+..+.++++++.| .++++|||+
T Consensus 238 ~ta~~in~aka~G-~RViAVGTT 259 (345)
T 1wdi_A 238 EVAEAVNRAKAEG-RRVVAVGTT 259 (345)
T ss_dssp HHHHHHHHHHHTT-CCEEEESHH
T ss_pred HHHHHHHHHHHcC-CeEEEEecc
Confidence 4567888999888 679999974
Done!