BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035393
(57 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224145008|ref|XP_002325493.1| predicted protein [Populus trichocarpa]
gi|118482907|gb|ABK93367.1| unknown [Populus trichocarpa]
gi|118483491|gb|ABK93644.1| unknown [Populus trichocarpa]
gi|118487244|gb|ABK95450.1| unknown [Populus trichocarpa]
gi|118488463|gb|ABK96046.1| unknown [Populus trichocarpa]
gi|222862368|gb|EEE99874.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 1 MAGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEK--SEEK 57
MAGE +M KFL P+ RLQ D+Q AAFWGVAA + AL+L+QPFDW+KKTF EK +EEK
Sbjct: 1 MAGENAMFKFLSPRLRLQSTDIQTAAFWGVAAGTTALWLVQPFDWIKKTFFEKANTEEK 59
>gi|356516225|ref|XP_003526796.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa
protein-like [Glycine max]
Length = 52
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 36/45 (80%)
Query: 11 LKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSE 55
L + RLQP DV+AAA WGV A +GALYLIQP+ WLKKTFLEK E
Sbjct: 4 LPARLRLQPTDVKAAALWGVTAATGALYLIQPWGWLKKTFLEKPE 48
>gi|356509088|ref|XP_003523284.1| PREDICTED: uncharacterized protein LOC100811454 [Glycine max]
Length = 52
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 11 LKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSE 55
L + RLQP DV+AAA WGV AV+GALYL+QP+ WLKKTFLEK +
Sbjct: 4 LPARIRLQPTDVKAAALWGVTAVTGALYLVQPWGWLKKTFLEKPD 48
>gi|242051302|ref|XP_002463395.1| hypothetical protein SORBIDRAFT_02g043020 [Sorghum bicolor]
gi|241926772|gb|EER99916.1| hypothetical protein SORBIDRAFT_02g043020 [Sorghum bicolor]
Length = 61
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 2 AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSEEK 57
A + + +F+ P+SR Q D+ AAA WGV A + LYL+QPFDW+KKTF EK E +
Sbjct: 5 ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQPFDWIKKTFFEKPEPE 60
>gi|326518062|dbj|BAK07283.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 60
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 2 AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSE 55
A +++ +FL + R+QP DV A A WGVAA S A+YL+QPFDW+KKTF EK E
Sbjct: 5 ASSSTLSRFLSSR-RIQPADVTALATWGVAAGSAAIYLVQPFDWIKKTFFEKPE 57
>gi|115474091|ref|NP_001060644.1| Os07g0680300 [Oryza sativa Japonica Group]
gi|113612180|dbj|BAF22558.1| Os07g0680300 [Oryza sativa Japonica Group]
gi|218200264|gb|EEC82691.1| hypothetical protein OsI_27348 [Oryza sativa Indica Group]
gi|222637693|gb|EEE67825.1| hypothetical protein OsJ_25595 [Oryza sativa Japonica Group]
Length = 61
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 2 AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSE 55
A + + +F+ P+ R Q D+ AAA WGV A + A+YL+QPFDW+KKTF EK E
Sbjct: 5 ASSSGLFRFISPRRRPQSTDIAAAATWGVFAGTAAIYLVQPFDWIKKTFFEKPE 58
>gi|195619556|gb|ACG31608.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
mays]
gi|195620534|gb|ACG32097.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
mays]
gi|195626768|gb|ACG35214.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
mays]
Length = 61
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 2 AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSEEK 57
A + + +F+ P+SR Q D+ AAA WGV A + LYL+QPFDW+KKTF +K E +
Sbjct: 5 ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQPFDWIKKTFFDKPEPE 60
>gi|195609334|gb|ACG26497.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
mays]
gi|195659251|gb|ACG49093.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
mays]
gi|414888122|tpg|DAA64136.1| TPA: ubiquinol-cytochrome c reductase complex protein [Zea mays]
Length = 61
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 2 AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSEEK 57
A + + +F+ P+SR Q D+ AAA WGV A + LYL+QPFDW+KKTF +K E +
Sbjct: 5 ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQPFDWIKKTFFQKPEPE 60
>gi|194692718|gb|ACF80443.1| unknown [Zea mays]
gi|195638680|gb|ACG38808.1| ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Zea
mays]
gi|414591193|tpg|DAA41764.1| TPA: Ubiquinol-cytochrome c reductase complex protein [Zea mays]
Length = 62
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 2 AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSEE 56
A + + +F+ P+SR Q D+ AAA WGV A + LYL+QPFDW+KKTF EK +
Sbjct: 5 ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQPFDWIKKTFFEKPPQ 59
>gi|225448725|ref|XP_002280954.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa
protein [Vitis vinifera]
Length = 59
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 45/55 (81%)
Query: 1 MAGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSE 55
M+ ++M KFLKP R QPVD+QAAA WGVA V+ ALYL+QPFDWLKKTFLEK +
Sbjct: 1 MSSGSAMFKFLKPSVRPQPVDIQAAAAWGVAGVTTALYLVQPFDWLKKTFLEKPD 55
>gi|218196556|gb|EEC78983.1| hypothetical protein OsI_19470 [Oryza sativa Indica Group]
Length = 66
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 7 MLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSE 55
+ +FL P R Q DV AAA W VA V+ A++L+QPFDW+KKTFLEK E
Sbjct: 10 LFRFLPPHRRPQGTDVAAAAGWTVAGVATAVWLVQPFDWIKKTFLEKQE 58
>gi|449441246|ref|XP_004138393.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa
protein-like [Cucumis sativus]
gi|449529780|ref|XP_004171876.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa
protein-like [Cucumis sativus]
Length = 57
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 45/57 (78%)
Query: 1 MAGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSEEK 57
MAGE+S+ KFL P R Q D+QAAA WGVAA + AL++IQPFDW+KKTF EK +EK
Sbjct: 1 MAGESSLFKFLSPGRRFQSTDIQAAAGWGVAAATTALWVIQPFDWIKKTFFEKPQEK 57
>gi|297736472|emb|CBI25343.3| unnamed protein product [Vitis vinifera]
Length = 53
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 7 MLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSE 55
M KFLKP R QPVD+QAAA WGVA V+ ALYL+QPFDWLKKTFLEK +
Sbjct: 1 MFKFLKPSVRPQPVDIQAAAAWGVAGVTTALYLVQPFDWLKKTFLEKPD 49
>gi|116780845|gb|ABK21843.1| unknown [Picea sitchensis]
Length = 63
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 3 GEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSEE 56
G +S+LKF+ + R QP D A A WGVAA + AL++IQPFDW+K+ F K E+
Sbjct: 6 GGSSLLKFVPIRIRPQPSDFTAVATWGVAAGTVALWMIQPFDWIKEQFTAKPED 59
>gi|168049305|ref|XP_001777104.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671547|gb|EDQ58097.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 61
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 6 SMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSEE 56
S+LKF+ R Q DV +A WG A GAL+L+QPFDW+K+ EE
Sbjct: 9 SLLKFIPKVIRPQTSDVSSAVLWGTTAACGALWLVQPFDWIKEQITGPKEE 59
>gi|1351365|sp|P48505.2|UCR11_SOLTU RecName: Full=Ubiquinol-cytochrome c reductase complex 6.7 kDa
protein; Short=CR6
gi|633683|emb|CAA57768.1| cytochrome c reductase subunit [Solanum tuberosum]
Length = 62
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 2 AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSEEK 57
A + KFL+PK R Q D+QAAA WGVAAV+GAL++IQP+D+L+KTF+EK EE+
Sbjct: 6 AAGNGLFKFLRPKLRPQSTDIQAAAGWGVAAVTGALWVIQPWDFLRKTFIEKQEEE 61
>gi|449018661|dbj|BAM82063.1| cytochrome c reductase subunit 10(XI) [Cyanidioschyzon merolae
strain 10D]
Length = 138
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 16 RLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTF 50
RL+PVDV AAA WG+ A + I+P+DW++ TF
Sbjct: 91 RLRPVDVGAAARWGLLVGLTAFWFIEPYDWIRSTF 125
>gi|414591194|tpg|DAA41765.1| TPA: hypothetical protein ZEAMMB73_771050 [Zea mays]
Length = 81
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 2 AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQ 41
A + + +F+ P+SR Q D+ AAA WGV A + LYL+Q
Sbjct: 5 ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQ 44
>gi|293336024|ref|NP_001169741.1| uncharacterized protein LOC100383622 [Zea mays]
gi|224031345|gb|ACN34748.1| unknown [Zea mays]
gi|414591192|tpg|DAA41763.1| TPA: hypothetical protein ZEAMMB73_771050 [Zea mays]
Length = 103
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 2 AGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQ 41
A + + +F+ P+SR Q D+ AAA WGV A + LYL+Q
Sbjct: 5 ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQ 44
>gi|168021391|ref|XP_001763225.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685708|gb|EDQ72102.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 107
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
Query: 11 LKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKK 48
L+P+ R D+++ A WGVA+V G +LIQP+DWL +
Sbjct: 18 LQPQHR----DMESIALWGVASVVGIFWLIQPWDWLSE 51
>gi|18405497|ref|NP_565941.1| uncharacterized protein [Arabidopsis thaliana]
gi|297824015|ref|XP_002879890.1| hypothetical protein ARALYDRAFT_483134 [Arabidopsis lyrata subsp.
lyrata]
gi|13877903|gb|AAK44029.1|AF370214_1 unknown protein [Arabidopsis thaliana]
gi|21553793|gb|AAM62886.1| ubiquinol--cytochrome-c reductase [Arabidopsis thaliana]
gi|23296543|gb|AAN13123.1| unknown protein [Arabidopsis thaliana]
gi|297325729|gb|EFH56149.1| hypothetical protein ARALYDRAFT_483134 [Arabidopsis lyrata subsp.
lyrata]
gi|330254781|gb|AEC09875.1| uncharacterized protein [Arabidopsis thaliana]
Length = 57
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%), Gaps = 4/59 (6%)
Query: 1 MAGEASMLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLE--KSEEK 57
MAG + +L +KPK +Q +D+QAAA WG+AA +GA++++QPF W+KKTF++ +EEK
Sbjct: 1 MAGTSGLLNAVKPK--IQTIDIQAAAGWGIAAAAGAIWVVQPFGWIKKTFIDPPPTEEK 57
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 800,895,440
Number of Sequences: 23463169
Number of extensions: 21053525
Number of successful extensions: 51263
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51241
Number of HSP's gapped (non-prelim): 22
length of query: 57
length of database: 8,064,228,071
effective HSP length: 30
effective length of query: 27
effective length of database: 7,360,333,001
effective search space: 198728991027
effective search space used: 198728991027
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)