Your job contains 1 sequence.
>035394
MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035394
(51 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006541 - symbol:AT4G31985 species:3702 "Ara... 271 1.4e-23 1
TAIR|locus:2076527 - symbol:AT3G02190 species:3702 "Arabi... 258 3.4e-22 1
TAIR|locus:2059541 - symbol:AT2G25210 species:3702 "Arabi... 235 9.2e-20 1
ASPGD|ASPL0000049335 - symbol:AN2301 species:162425 "Emer... 219 4.6e-18 1
DICTYBASE|DDB_G0302511 - symbol:rpl39 "60S ribosomal prot... 219 4.6e-18 1
UNIPROTKB|Q98TF5 - symbol:RPL39 "60S ribosomal protein L3... 216 9.5e-18 1
UNIPROTKB|Q3T051 - symbol:RPL39 "60S ribosomal protein L3... 216 9.5e-18 1
UNIPROTKB|J9NZS7 - symbol:RPL39 "Uncharacterized protein"... 216 9.5e-18 1
UNIPROTKB|P62891 - symbol:RPL39 "60S ribosomal protein L3... 216 9.5e-18 1
UNIPROTKB|K7GP63 - symbol:LOC100736568 "Uncharacterized p... 216 9.5e-18 1
MGI|MGI:1914498 - symbol:Rpl39 "ribosomal protein L39" sp... 216 9.5e-18 1
RGD|3593 - symbol:Rpl39 "ribosomal protein L39" species:1... 216 9.5e-18 1
ZFIN|ZDB-GENE-040625-51 - symbol:rpl39 "ribosomal protein... 216 9.5e-18 1
UNIPROTKB|F1NLU2 - symbol:RPL39 "60S ribosomal protein L3... 212 2.5e-17 1
UNIPROTKB|Q59GN2 - symbol:RPL39P5 "Putative 60S ribosomal... 212 2.5e-17 1
UNIPROTKB|K7GN10 - symbol:LOC100736568 "Uncharacterized p... 212 2.5e-17 1
FB|FBgn0023170 - symbol:RpL39 "Ribosomal protein L39" spe... 211 3.2e-17 1
POMBASE|SPCC663.04 - symbol:rpl39 "60S ribosomal protein ... 210 4.1e-17 1
RGD|1561345 - symbol:Rpl39l "ribosomal protein L39-like" ... 206 1.1e-16 1
UNIPROTKB|Q96EH5 - symbol:RPL39L "60S ribosomal protein L... 201 3.7e-16 1
SGD|S000003725 - symbol:RPL39 "Ribosomal 60S subunit prot... 193 2.6e-15 1
WB|WBGene00004453 - symbol:rpl-39 species:6239 "Caenorhab... 190 5.4e-15 1
UNIPROTKB|F1LXJ8 - symbol:F1LXJ8 "Uncharacterized protein... 182 3.8e-14 1
UNIPROTKB|K7GT08 - symbol:LOC100736568 "Uncharacterized p... 109 2.1e-06 1
>TAIR|locus:505006541 [details] [associations]
symbol:AT4G31985 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
InterPro:IPR000077 InterPro:IPR020083 Pfam:PF00832 PROSITE:PS00051
EMBL:CP002687 GenomeReviews:CT486007_GR GenomeReviews:CT485783_GR
GO:GO:0006412 GO:GO:0003735 EMBL:AL021636 EMBL:AC007070
UniGene:At.64384 GO:GO:0022625 UniGene:At.22311 EMBL:AL049607
eggNOG:COG2167 Gene3D:1.10.1620.10 InterPro:IPR023626
PANTHER:PTHR19970 SUPFAM:SSF48662 EMBL:AK118235 EMBL:AF372908
EMBL:AY057730 EMBL:BT010475 IPI:IPI00528335 PIR:F84645
RefSeq:NP_180093.1 RefSeq:NP_567886.1 UniGene:At.19137
UniGene:At.44753 ProteinModelPortal:P51424 SMR:P51424 IntAct:P51424
STRING:P51424 EnsemblPlants:AT4G31985.1 GeneID:817059 GeneID:829329
KEGG:ath:AT2G25210 KEGG:ath:AT4G31985 GeneFarm:373 GeneFarm:376
TAIR:At2g25210 TAIR:At4g31985 HOGENOM:HOG000230627
InParanoid:P51424 KO:K02924 OMA:MPSQKSF PhylomeDB:P51424
ProtClustDB:CLSN2683149 Genevestigator:P51424 GermOnline:AT2G25210
Uniprot:P51424
Length = 51
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 48/51 (94%), Positives = 50/51 (98%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
MPSHK+FMIKKKL KKMRQNRPIPHWIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51
>TAIR|locus:2076527 [details] [associations]
symbol:AT3G02190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0006626 "protein targeting to mitochondrion"
evidence=RCA] InterPro:IPR000077 InterPro:IPR020083 Pfam:PF00832
PROSITE:PS00051 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006412 GO:GO:0003735 EMBL:AC009755 EMBL:AC011664
GO:GO:0022625 eggNOG:COG2167 Gene3D:1.10.1620.10 InterPro:IPR023626
PANTHER:PTHR19970 SUPFAM:SSF48662 HOGENOM:HOG000230627 KO:K02924
ProtClustDB:CLSN2683149 EMBL:AK118748 EMBL:BT004930 EMBL:AY088763
IPI:IPI00536774 RefSeq:NP_566167.1 UniGene:At.41173
ProteinModelPortal:Q8L8W6 SMR:Q8L8W6 IntAct:Q8L8W6 STRING:Q8L8W6
EnsemblPlants:AT3G02190.1 GeneID:820350 KEGG:ath:AT3G02190
GeneFarm:375 TAIR:At3g02190 InParanoid:Q8L8W6 OMA:PNWIRLR
PhylomeDB:Q8L8W6 Genevestigator:Q8L8W6 GermOnline:AT3G02190
Uniprot:Q8L8W6
Length = 51
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
MPSHK+FMIKKKL KKMRQNRPIP+WIR+RTDN IRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF 51
>TAIR|locus:2059541 [details] [associations]
symbol:AT2G25210 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
InterPro:IPR000077 InterPro:IPR020083 Pfam:PF00832 PROSITE:PS00051
EMBL:CP002685 GO:GO:0006412 GO:GO:0003735 EMBL:AC007070
UniGene:At.64384 GO:GO:0022625 UniGene:At.22311 Gene3D:1.10.1620.10
InterPro:IPR023626 PANTHER:PTHR19970 SUPFAM:SSF48662
RefSeq:NP_180093.1 UniGene:At.44753 GeneID:817059
KEGG:ath:AT2G25210 HOGENOM:HOG000230627 KO:K02924
ProtClustDB:CLSN2683149 IPI:IPI00537984 ProteinModelPortal:A0NAA9
SMR:A0NAA9 STRING:A0NAA9 EnsemblPlants:AT2G25210.1
Genevestigator:A0NAA9 Uniprot:A0NAA9
Length = 44
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 42/44 (95%), Positives = 43/44 (97%)
Query: 8 MIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
MIKKKL KKMRQNRPIPHWIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 44
>ASPGD|ASPL0000049335 [details] [associations]
symbol:AN2301 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000077 Pfam:PF00832 GO:GO:0006412
EMBL:BN001307 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.1620.10
InterPro:IPR023626 PANTHER:PTHR19970 SUPFAM:SSF48662
HOGENOM:HOG000230627 OMA:MPSQKSF ProteinModelPortal:C8VN49
SMR:C8VN49 EnsemblFungi:CADANIAT00008994 Uniprot:C8VN49
Length = 51
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
MPSHK+F K+KLAK +QNRPIP WIR+RT NTIRYNAKRRHWR+T+LG
Sbjct: 1 MPSHKSFRTKQKLAKAQKQNRPIPQWIRLRTGNTIRYNAKRRHWRKTRLG 50
>DICTYBASE|DDB_G0302511 [details] [associations]
symbol:rpl39 "60S ribosomal protein L39"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] InterPro:IPR000077 InterPro:IPR020083
Pfam:PF00832 PROSITE:PS00051 dictyBase:DDB_G0302511 GO:GO:0006412
GenomeReviews:CM000154_GR EMBL:AAFI02000104 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.1620.10 InterPro:IPR023626
PANTHER:PTHR19970 SUPFAM:SSF48662 KO:K02924 OMA:MPSQKSF
RefSeq:XP_002649122.1 EnsemblProtists:DDB0302512 GeneID:8626285
KEGG:ddi:DDB_G0302511 ProtClustDB:CLSZ2848867 Uniprot:C7G051
Length = 51
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
MPS+KT IKK L KK +QNRP+P WIR+RTDNTIRYN KRRHWRRTKLG
Sbjct: 1 MPSNKTLKIKKILGKKQKQNRPVPQWIRLRTDNTIRYNNKRRHWRRTKLG 50
>UNIPROTKB|Q98TF5 [details] [associations]
symbol:RPL39 "60S ribosomal protein L39" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000077 InterPro:IPR020083
Pfam:PF00832 PROSITE:PS00051 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG2167 HOVERGEN:HBG001245 Gene3D:1.10.1620.10
InterPro:IPR023626 PANTHER:PTHR19970 SUPFAM:SSF48662 KO:K02924
OMA:MPSQKSF CTD:6170 GeneTree:ENSGT00390000014814 OrthoDB:EOG4W3SPS
EMBL:AB046397 IPI:IPI00592436 RefSeq:NP_989603.1 UniGene:Gga.1372
ProteinModelPortal:Q98TF5 SMR:Q98TF5 STRING:Q98TF5 PRIDE:Q98TF5
Ensembl:ENSGALT00000039072 GeneID:374132 KEGG:gga:374132
InParanoid:Q98TF5 NextBio:20813647 ArrayExpress:Q98TF5
Uniprot:Q98TF5
Length = 51
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1 MSSHKTFKIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>UNIPROTKB|Q3T051 [details] [associations]
symbol:RPL39 "60S ribosomal protein L39" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000077 InterPro:IPR020083
Pfam:PF00832 PROSITE:PS00051 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG2167 HOVERGEN:HBG001245 Gene3D:1.10.1620.10
InterPro:IPR023626 PANTHER:PTHR19970 SUPFAM:SSF48662 KO:K02924
OMA:MPSQKSF EMBL:BC102562 EMBL:BC151476 IPI:IPI00868589
RefSeq:NP_001098925.1 UniGene:Bt.67135 UniGene:Bt.9548
ProteinModelPortal:Q3T051 SMR:Q3T051 PRIDE:Q3T051
Ensembl:ENSBTAT00000049315 Ensembl:ENSBTAT00000057287
Ensembl:ENSBTAT00000062986 Ensembl:ENSBTAT00000064702 GeneID:767908
KEGG:bta:767908 CTD:6170 GeneTree:ENSGT00390000014814
InParanoid:Q3T051 OrthoDB:EOG4W3SPS NextBio:20918265 Uniprot:Q3T051
Length = 51
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>UNIPROTKB|J9NZS7 [details] [associations]
symbol:RPL39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000077
InterPro:IPR020083 Pfam:PF00832 PROSITE:PS00051 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.1620.10 InterPro:IPR023626
PANTHER:PTHR19970 SUPFAM:SSF48662 KO:K02924 OMA:MPSQKSF
GeneTree:ENSGT00390000014814 EMBL:AAEX03005652 EMBL:AAEX03017475
EMBL:AAEX03003500 EMBL:AAEX03007502 EMBL:AAEX03016414
RefSeq:XP_003431579.1 RefSeq:XP_003434034.1 RefSeq:XP_003434633.1
RefSeq:XP_003435166.1 Ensembl:ENSCAFT00000046102
Ensembl:ENSCAFT00000047239 Ensembl:ENSCAFT00000047528
Ensembl:ENSCAFT00000047637 Ensembl:ENSCAFT00000047989
GeneID:100682542 GeneID:100685611 GeneID:100685924 GeneID:100686103
KEGG:cfa:100682542 KEGG:cfa:100685611 KEGG:cfa:100685924
KEGG:cfa:100686103 Uniprot:J9NZS7
Length = 51
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>UNIPROTKB|P62891 [details] [associations]
symbol:RPL39 "60S ribosomal protein L39" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS;TAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA;TAS] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000077 InterPro:IPR020083 Pfam:PF00832 PROSITE:PS00051
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003723
GO:GO:0003735 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 HPA:HPA047105
eggNOG:COG2167 HOVERGEN:HBG001245 Gene3D:1.10.1620.10
InterPro:IPR023626 PANTHER:PTHR19970 SUPFAM:SSF48662 KO:K02924
OMA:MPSQKSF CTD:6170 OrthoDB:EOG4W3SPS EMBL:U57846 EMBL:D79205
EMBL:AB061835 EMBL:BC001019 EMBL:BC070205 EMBL:AB046411
IPI:IPI00219162 PIR:G02654 RefSeq:NP_000991.1 UniGene:Hs.300141
UniGene:Hs.558387 ProteinModelPortal:P62891 SMR:P62891
STRING:P62891 PhosphoSite:P62891 DMDM:51702812 PRIDE:P62891
DNASU:6170 Ensembl:ENST00000361575 GeneID:6170 KEGG:hsa:6170
UCSC:uc004erx.1 GeneCards:GC0XM118920 HGNC:HGNC:10350 MIM:601904
neXtProt:NX_P62891 PharmGKB:PA34743 InParanoid:P62891
PhylomeDB:P62891 GenomeRNAi:6170 NextBio:23971 ArrayExpress:P62891
Bgee:P62891 CleanEx:HS_RPL39 Genevestigator:P62891
GermOnline:ENSG00000188890 GermOnline:ENSG00000198918
Uniprot:P62891
Length = 51
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>UNIPROTKB|K7GP63 [details] [associations]
symbol:LOC100736568 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000077 InterPro:IPR020083
Pfam:PF00832 PROSITE:PS00051 Gene3D:1.10.1620.10 InterPro:IPR023626
PANTHER:PTHR19970 SUPFAM:SSF48662 EMBL:CU929805 GeneID:100515520
RefSeq:XP_003122846.1 RefSeq:XP_003135390.1 RefSeq:XP_003354632.1
RefSeq:XP_003360477.1 Ensembl:ENSSSCT00000035556 GeneID:100525679
GeneID:100623540 Uniprot:K7GP63
Length = 51
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>MGI|MGI:1914498 [details] [associations]
symbol:Rpl39 "ribosomal protein L39" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000077
InterPro:IPR020083 Pfam:PF00832 PROSITE:PS00051 MGI:MGI:1914498
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 eggNOG:COG2167
HOVERGEN:HBG001245 Gene3D:1.10.1620.10 InterPro:IPR023626
PANTHER:PTHR19970 SUPFAM:SSF48662 KO:K02924 CTD:6170
OrthoDB:EOG4W3SPS EMBL:AK002591 EMBL:AK005511 EMBL:AK007821
EMBL:AK008853 EMBL:AK013381 EMBL:AK028139 EMBL:AK088761
EMBL:BC039092 IPI:IPI00273974 RefSeq:NP_080331.1 UniGene:Mm.30478
ProteinModelPortal:P62892 SMR:P62892 STRING:P62892
PhosphoSite:P62892 PaxDb:P62892 PRIDE:P62892
Ensembl:ENSMUST00000115231 GeneID:67248 KEGG:mmu:67248
InParanoid:P62892 NextBio:324006 Bgee:P62892 CleanEx:MM_RPL39
Genevestigator:P62892 GermOnline:ENSMUSG00000036305 Uniprot:P62892
Length = 51
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>RGD|3593 [details] [associations]
symbol:Rpl39 "ribosomal protein L39" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000077 InterPro:IPR020083
Pfam:PF00832 PROSITE:PS00051 RGD:3593 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG2167 HOVERGEN:HBG001245 Gene3D:1.10.1620.10
InterPro:IPR023626 PANTHER:PTHR19970 SUPFAM:SSF48662 KO:K02924
OMA:MPSQKSF CTD:6170 GeneTree:ENSGT00390000014814 OrthoDB:EOG4W3SPS
EMBL:X82551 EMBL:BC058489 IPI:IPI00231607 PIR:JC4229
RefSeq:NP_037007.1 RefSeq:XP_002725360.2 RefSeq:XP_002728571.2
RefSeq:XP_003752088.1 RefSeq:XP_003753508.1 RefSeq:XP_003754806.1
UniGene:Rn.129577 UniGene:Rn.6172 ProteinModelPortal:P62893
SMR:P62893 STRING:P62893 PRIDE:P62893 Ensembl:ENSRNOT00000040815
Ensembl:ENSRNOT00000043244 Ensembl:ENSRNOT00000046536
Ensembl:ENSRNOT00000047542 Ensembl:ENSRNOT00000050345
Ensembl:ENSRNOT00000059010 Ensembl:ENSRNOT00000064521
GeneID:100361661 GeneID:100363391 GeneID:100364645 GeneID:25347
KEGG:rno:100361661 KEGG:rno:100363391 KEGG:rno:100364645
KEGG:rno:25347 UCSC:RGD:3593 InParanoid:P62893 NextBio:606279
Genevestigator:P62893 GermOnline:ENSRNOG00000029267
GermOnline:ENSRNOG00000029751 GermOnline:ENSRNOG00000032622
GermOnline:ENSRNOG00000032835 GermOnline:ENSRNOG00000034237
Uniprot:P62893
Length = 51
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>ZFIN|ZDB-GENE-040625-51 [details] [associations]
symbol:rpl39 "ribosomal protein L39" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000077 InterPro:IPR020083 Pfam:PF00832 PROSITE:PS00051
ZFIN:ZDB-GENE-040625-51 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG2167 HOVERGEN:HBG001245 Gene3D:1.10.1620.10
InterPro:IPR023626 PANTHER:PTHR19970 SUPFAM:SSF48662 KO:K02924
CTD:6170 GeneTree:ENSGT00390000014814 OrthoDB:EOG4W3SPS
EMBL:BX571981 EMBL:BC072550 IPI:IPI00481546 RefSeq:NP_001002078.1
UniGene:Dr.76062 SMR:Q6IMW8 STRING:Q6IMW8
Ensembl:ENSDART00000052761 GeneID:415168 KEGG:dre:415168
InParanoid:Q6IMW8 NextBio:20818840 Uniprot:Q6IMW8
Length = 51
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 1 MASHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>UNIPROTKB|F1NLU2 [details] [associations]
symbol:RPL39 "60S ribosomal protein L39" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000077 InterPro:IPR020083
Pfam:PF00832 PROSITE:PS00051 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.1620.10 InterPro:IPR023626
PANTHER:PTHR19970 SUPFAM:SSF48662 OMA:MPSQKSF
GeneTree:ENSGT00390000014814 UniGene:Gga.1372 NextBio:20813647
EMBL:AADN02013623 IPI:IPI00820791 Ensembl:ENSGALT00000014045
ArrayExpress:F1NLU2 Uniprot:F1NLU2
Length = 50
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 38/48 (79%), Positives = 42/48 (87%)
Query: 3 SHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 2 SHKTFKIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 49
>UNIPROTKB|Q59GN2 [details] [associations]
symbol:RPL39P5 "Putative 60S ribosomal protein L39-like 5"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR000077
Pfam:PF00832 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
HPA:HPA047105 EMBL:AB209077 IPI:IPI00037619 UniGene:Hs.611241
ProteinModelPortal:Q59GN2 SMR:Q59GN2 STRING:Q59GN2 DMDM:205829460
PRIDE:Q59GN2 GeneCards:GC03M134070 HGNC:HGNC:26015
neXtProt:NX_Q59GN2 eggNOG:COG2167 HOVERGEN:HBG001245
InParanoid:Q59GN2 PhylomeDB:Q59GN2 Genevestigator:Q59GN2
Gene3D:1.10.1620.10 InterPro:IPR023626 PANTHER:PTHR19970
SUPFAM:SSF48662 Uniprot:Q59GN2
Length = 51
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 38/50 (76%), Positives = 43/50 (86%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHW+RTKLG
Sbjct: 1 MSSHKTFKIKQFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWKRTKLG 50
>UNIPROTKB|K7GN10 [details] [associations]
symbol:LOC100736568 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000077 InterPro:IPR020083
Pfam:PF00832 PROSITE:PS00051 Gene3D:1.10.1620.10 InterPro:IPR023626
PANTHER:PTHR19970 SUPFAM:SSF48662 EMBL:CU929805
RefSeq:XP_003360478.1 Ensembl:ENSSSCT00000034774 GeneID:100515520
Uniprot:K7GN10
Length = 60
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 38/48 (79%), Positives = 42/48 (87%)
Query: 3 SHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG
Sbjct: 12 SHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 59
>FB|FBgn0023170 [details] [associations]
symbol:RpL39 "Ribosomal protein L39" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;NAS] [GO:0005840
"ribosome" evidence=NAS] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR000077 InterPro:IPR020083 Pfam:PF00832
PROSITE:PS00051 EMBL:AE013599 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0000022 eggNOG:COG2167 Gene3D:1.10.1620.10
InterPro:IPR023626 PANTHER:PTHR19970 SUPFAM:SSF48662 KO:K02924
OMA:MPSQKSF CTD:6170 GeneTree:ENSGT00390000014814 EMBL:AF012422
EMBL:AY071712 RefSeq:NP_477314.1 UniGene:Dm.14062
ProteinModelPortal:O16130 SMR:O16130 DIP:DIP-19057N
MINT:MINT-790104 STRING:O16130 EnsemblMetazoa:FBtr0072185
GeneID:37849 KEGG:dme:Dmel_CG3997 FlyBase:FBgn0023170
InParanoid:O16130 OrthoDB:EOG4SBCFT PhylomeDB:O16130 ChiTaRS:RPL39
GenomeRNAi:37849 NextBio:805677 Bgee:O16130 GermOnline:CG3997
Uniprot:O16130
Length = 51
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 49
M +HK+F IK+KLAKK++QNR +P W+R+RT NTIRYNAKRRHWRRTKL
Sbjct: 1 MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKL 49
>POMBASE|SPCC663.04 [details] [associations]
symbol:rpl39 "60S ribosomal protein L39" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0006412 "translation" evidence=ISO] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR000077 InterPro:IPR020083 Pfam:PF00832 PROSITE:PS00051
PomBase:SPCC663.04 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0022625 eggNOG:COG2167
Gene3D:1.10.1620.10 InterPro:IPR023626 PANTHER:PTHR19970
SUPFAM:SSF48662 HOGENOM:HOG000230627 KO:K02924 OMA:MPSQKSF
PIR:S10053 PIR:T41535 RefSeq:NP_588266.1 ProteinModelPortal:P05767
SMR:P05767 IntAct:P05767 STRING:P05767 PRIDE:P05767
EnsemblFungi:SPCC663.04.1 GeneID:2539277 KEGG:spo:SPCC663.04
OrthoDB:EOG41ZJMS NextBio:20800445 Uniprot:P05767
Length = 51
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 49
MPSHK+F K+KLAK RQNRPIP WIR+RT NT+ YN KRRHWRRTKL
Sbjct: 1 MPSHKSFRTKQKLAKAARQNRPIPQWIRLRTGNTVHYNMKRRHWRRTKL 49
>RGD|1561345 [details] [associations]
symbol:Rpl39l "ribosomal protein L39-like" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] InterPro:IPR000077 InterPro:IPR020083
Pfam:PF00832 PROSITE:PS00051 RGD:1561345 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG2167 HOVERGEN:HBG001245
Gene3D:1.10.1620.10 InterPro:IPR023626 PANTHER:PTHR19970
SUPFAM:SSF48662 HOGENOM:HOG000230627 KO:K02924 OMA:PNWIRLR
GeneTree:ENSGT00390000014814 EMBL:CH474017 EMBL:BC103490
IPI:IPI00198967 RefSeq:NP_001182400.1 UniGene:Rn.26687 SMR:Q3ZB89
STRING:Q3ZB89 Ensembl:ENSRNOT00000051564 GeneID:497860
KEGG:rno:497860 UCSC:RGD:1561345 InParanoid:Q3ZB89
OrthoDB:EOG40VVRC NextBio:697839 Genevestigator:Q3ZB89
Uniprot:Q3ZB89
Length = 51
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WI+M+T N I YN+KRRHWRRTKLG
Sbjct: 1 MASHKTFRIKRFLAKKQKQNRPIPQWIQMKTGNKIMYNSKRRHWRRTKLG 50
>UNIPROTKB|Q96EH5 [details] [associations]
symbol:RPL39L "60S ribosomal protein L39-like" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=NAS] [GO:0007283
"spermatogenesis" evidence=IEP] InterPro:IPR000077
InterPro:IPR020083 Pfam:PF00832 PROSITE:PS00051 GO:GO:0006412
GO:GO:0007283 GO:GO:0003735 GO:GO:0022625 HPA:HPA047105
eggNOG:COG2167 HOVERGEN:HBG001245 Gene3D:1.10.1620.10
InterPro:IPR023626 PANTHER:PTHR19970 SUPFAM:SSF48662
HOGENOM:HOG000230627 EMBL:L05096 EMBL:AF548529 EMBL:AB063607
EMBL:AB063610 EMBL:BC012328 IPI:IPI00215843 RefSeq:NP_443201.1
UniGene:Hs.647900 ProteinModelPortal:Q96EH5 SMR:Q96EH5
STRING:Q96EH5 DMDM:29427944 PRIDE:Q96EH5 DNASU:116832
Ensembl:ENST00000296277 Ensembl:ENST00000433055
Ensembl:ENST00000455270 GeneID:116832 KEGG:hsa:116832
UCSC:uc003fre.1 CTD:116832 GeneCards:GC03M186839 HGNC:HGNC:17094
HPA:CAB004658 MIM:607547 neXtProt:NX_Q96EH5 PharmGKB:PA34744
InParanoid:Q96EH5 OMA:MKPGSKI OrthoDB:EOG4SBF0Q PhylomeDB:Q96EH5
GenomeRNAi:116832 NextBio:79992 Bgee:Q96EH5 CleanEx:HS_RPL39L
Genevestigator:Q96EH5 GermOnline:ENSG00000163923 Uniprot:Q96EH5
Length = 51
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 36/50 (72%), Positives = 42/50 (84%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
M SHKTF IK+ LAKK +QNRPIP WI+M+ + IRYN+KRRHWRRTKLG
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLG 50
>SGD|S000003725 [details] [associations]
symbol:RPL39 "Ribosomal 60S subunit protein L39" species:4932
"Saccharomyces cerevisiae" [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000077 InterPro:IPR020083
Pfam:PF00832 PROSITE:PS00051 SGD:S000003725 EMBL:BK006943
GO:GO:0003735 GO:GO:0002181 PDB:4B6A PDBsum:4B6A GO:GO:0022625
eggNOG:COG2167 Gene3D:1.10.1620.10 InterPro:IPR023626
PANTHER:PTHR19970 SUPFAM:SSF48662 PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
PDBsum:3U5I PDB:2WW9 PDB:2WWA PDBsum:2WW9 PDBsum:2WWA
HOGENOM:HOG000230627 KO:K02924 GeneTree:ENSGT00390000014814
OrthoDB:EOG41ZJMS EMBL:X01963 EMBL:Z49464 PIR:B23082
RefSeq:NP_012346.1 ProteinModelPortal:P04650 SMR:P04650
DIP:DIP-4522N IntAct:P04650 MINT:MINT-491659 STRING:P04650
PeptideAtlas:P04650 EnsemblFungi:YJL189W GeneID:853250
KEGG:sce:YJL189W EvolutionaryTrace:P04650 NextBio:973493
Genevestigator:P04650 GermOnline:YJL189W Uniprot:P04650
Length = 51
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 33/49 (67%), Positives = 43/49 (87%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 49
M + K+F IK+K+AK +QNRP+P WIR+RT+NTIRYNAKRR+WRRTK+
Sbjct: 1 MAAQKSFRIKQKMAKAKKQNRPLPQWIRLRTNNTIRYNAKRRNWRRTKM 49
>WB|WBGene00004453 [details] [associations]
symbol:rpl-39 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000077 InterPro:IPR020083 Pfam:PF00832
PROSITE:PS00051 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0002119 GO:GO:0006412 GO:GO:0040018
GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 eggNOG:COG2167
Gene3D:1.10.1620.10 InterPro:IPR023626 PANTHER:PTHR19970
SUPFAM:SSF48662 HOGENOM:HOG000230627 KO:K02924 OMA:MPSQKSF
GeneTree:ENSGT00390000014814 EMBL:FO080683 EMBL:AF303271 PIR:T15641
RefSeq:NP_505006.1 UniGene:Cel.8759 ProteinModelPortal:P52814
SMR:P52814 STRING:P52814 PaxDb:P52814 EnsemblMetazoa:C26F1.9
GeneID:179153 KEGG:cel:CELE_C26F1.9 UCSC:C26F1.9.1 CTD:179153
WormBase:C26F1.9 InParanoid:P52814 NextBio:904142 Uniprot:P52814
Length = 51
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 49
M + K IK+KLAKK +QNRP+P W+RM+T NT++YNAKRRHWRRTKL
Sbjct: 1 MSALKKSFIKRKLAKKQKQNRPMPQWVRMKTGNTMKYNAKRRHWRRTKL 49
>UNIPROTKB|F1LXJ8 [details] [associations]
symbol:F1LXJ8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000077
InterPro:IPR020083 Pfam:PF00832 PROSITE:PS00051 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.1620.10 InterPro:IPR023626
PANTHER:PTHR19970 SUPFAM:SSF48662 IPI:IPI00568110
Ensembl:ENSRNOT00000051137 Uniprot:F1LXJ8
Length = 51
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 3 SHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 50
S KTF IK+ L+KK +QNRPIP WI+++ DN I+YN KRRHWRR KLG
Sbjct: 3 SPKTFRIKQFLSKKQKQNRPIPQWIQVKPDNVIKYNTKRRHWRRKKLG 50
>UNIPROTKB|K7GT08 [details] [associations]
symbol:LOC100736568 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000077 Pfam:PF00832
Gene3D:1.10.1620.10 InterPro:IPR023626 PANTHER:PTHR19970
SUPFAM:SSF48662 EMBL:CU929805 Ensembl:ENSSSCT00000035359
Uniprot:K7GT08
Length = 35
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 7 FMIKKKLAKKMRQNRPIPHWIRMRTDNTIRY 37
F IK+ LAKK +QNRPIP WIRM+T N I +
Sbjct: 2 FRIKRFLAKKQKQNRPIPQWIRMKTGNKISF 32
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.329 0.135 0.452 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 51 51 0.00091 102 3 11 22 0.47 26
29 0.44 26
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 398 (42 KB)
Total size of DFA: 77 KB (2065 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 6.89u 0.13s 7.02t Elapsed: 00:00:01
Total cpu time: 6.89u 0.13s 7.02t Elapsed: 00:00:01
Start: Mon May 20 18:03:17 2013 End: Mon May 20 18:03:18 2013