BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035410
(65 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93X17|SNAK2_SOLTU Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1
Length = 104
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 1 MQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGN 60
+ IDCGG C RC L SRP LCNRACGTCC RC CVPPGT+GN E C CY +TTHGN
Sbjct: 41 YKKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETC-PCYASLTTHGN 99
Query: 61 RTKCP 65
+ KCP
Sbjct: 100 KRKCP 104
>sp|Q9LFR3|GASAE_ARATH Gibberellin-regulated protein 14 OS=Arabidopsis thaliana GN=GASA14
PE=1 SV=1
Length = 275
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 46/62 (74%)
Query: 4 IDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTK 63
IDC LC RC HSR N+C RAC TCC RCKCVPPGT GN+E CGSCY +M T G ++K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273
Query: 64 CP 65
CP
Sbjct: 274 CP 275
>sp|P46687|GASA3_ARATH Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3
PE=2 SV=1
Length = 99
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 1 MQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGN 60
+ IDCGG CK RCS SRPNLC RAC +CC RC CVPPGTAGN LC CY +TT G
Sbjct: 36 VVKIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGG 94
Query: 61 RTKCP 65
R KCP
Sbjct: 95 RLKCP 99
>sp|F4IQJ4|GASAB_ARATH Gibberellin-regulated protein 11 OS=Arabidopsis thaliana
GN=GASA11 PE=3 SV=1
Length = 94
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 4 IDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTK 63
IDC C++RCSL SRPNLC+RACGTCC RC CV PGT+GN + C CY +TTHG R K
Sbjct: 34 IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKC-PCYGSLTTHGGRRK 92
Query: 64 CP 65
CP
Sbjct: 93 CP 94
>sp|P46689|GASA1_ARATH Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1
PE=2 SV=2
Length = 98
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 2 QDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNR 61
+ IDCG C RC L RP LC+RACGTCC RC CVPPGT GN + C CY +TTHG R
Sbjct: 36 KKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKC-QCYASLTTHGGR 94
Query: 62 TKCP 65
KCP
Sbjct: 95 RKCP 98
>sp|Q8GWK5|GASA9_ARATH Gibberellin-regulated protein 9 OS=Arabidopsis thaliana GN=GASA9
PE=2 SV=1
Length = 119
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 4 IDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTK 63
I+CG C +RCS SR +C+RACG+CC +C+CVPPGT+GN C CY + THGN+ K
Sbjct: 59 INCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASC-PCYASIRTHGNKLK 117
Query: 64 CP 65
CP
Sbjct: 118 CP 119
>sp|P46688|GASA2_ARATH Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2
PE=2 SV=1
Length = 99
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 1 MQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGN 60
+ IDCGG CK RCS SR LC RAC +CC RC CVPPGT+GN LC CY +TTHG
Sbjct: 36 VVKIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGG 94
Query: 61 RTKCP 65
R KCP
Sbjct: 95 RLKCP 99
>sp|Q6NMQ7|GASA6_ARATH Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6
PE=3 SV=1
Length = 101
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGN 60
++ CGG C +RCS C C CC +C CVPPGT GN+++C CY + T
Sbjct: 38 LKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVC-PCYNNWKTQQG 96
Query: 61 RTKCP 65
KCP
Sbjct: 97 GPKCP 101
>sp|O80641|GASA8_ARATH Gibberellin-regulated protein 8 OS=Arabidopsis thaliana
GN=At2g39540 PE=2 SV=1
Length = 87
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 3 DIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRT 62
D CGG C RCS + C + C CC +C CVP GT G+++ C CY DM +
Sbjct: 26 DSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDEC-PCYRDMKNSKGGS 84
Query: 63 KCP 65
KCP
Sbjct: 85 KCP 87
>sp|Q948Z4|SNAK1_SOLTU Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1
Length = 88
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 6 CGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 65
C CK RCS + C + CG CC CKCVP GT GN+ C CY D ++KCP
Sbjct: 30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHEC-PCYRDKKNSKGKSKCP 88
>sp|Q8LFM2|GASAA_ARATH Gibberellin-regulated protein 10 OS=Arabidopsis thaliana
GN=GASA10 PE=2 SV=1
Length = 89
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 6 CGGLCKQRCSLHSRPNLCNRACGTCCVRCK-CVPPGTAGNRELCGSCYTDMTTHGNRTKC 64
CGG C RCS R + C + C CC +C CVP GT GN++ C CY DM +KC
Sbjct: 30 CGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDEC-PCYRDMKNSKGTSKC 88
Query: 65 P 65
P
Sbjct: 89 P 89
>sp|O82328|GASA7_ARATH Gibberellin-regulated protein 7 OS=Arabidopsis thaliana GN=GASA7
PE=3 SV=1
Length = 108
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 6 CGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 65
CG C+ RC + C + CG CC C+CVP GT GN+ C +CY D + KCP
Sbjct: 50 CGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHEC-ACYRDKLSSKGTPKCP 108
>sp|P47926|RSI1_SOLLC Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1
Length = 96
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 1 MQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGN 60
++ DC C RCS S C C CC C CVP G GN++ C CY + T
Sbjct: 33 LRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSC-PCYNNWKTQEG 91
Query: 61 RTKCP 65
+ KCP
Sbjct: 92 KPKCP 96
>sp|P46690|GASA4_ARATH Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4
PE=1 SV=2
Length = 106
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1 MQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGN 60
++ C C +RC C C CC +C CVPPG GN+++C SCY + T
Sbjct: 43 LKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVC-SCYNNWKTQEG 101
Query: 61 RTKCP 65
KCP
Sbjct: 102 GPKCP 106
>sp|P86888|PMLN_PRUPE Peamaclein OS=Prunus persica PE=1 SV=1
Length = 63
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 6 CGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 65
C C RCS C + CG CC +C CVP GT GN++ C CY D+ KCP
Sbjct: 5 CDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDEC-PCYRDLKNSKGNPKCP 63
>sp|P27057|GAST1_SOLLC Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1
Length = 112
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 5 DCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKC 64
DC C RCS S C C CC +C CVP GT GN++ C CY + T KC
Sbjct: 53 DCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSC-PCYNNWKTKRGGPKC 111
Query: 65 P 65
P
Sbjct: 112 P 112
>sp|Q84J95|GASA5_ARATH Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5
PE=2 SV=1
Length = 97
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGN 60
++ C C RCS S C C CC +C CVPPGT GN++ C CY + T
Sbjct: 34 LKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTC-PCYNNWKTKEG 92
Query: 61 RTKCP 65
R KCP
Sbjct: 93 RPKCP 97
>sp|A8MR46|GASAD_ARATH Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13
PE=3 SV=1
Length = 103
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 4 IDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTK 63
++CG C RCS C C CC +C CVPPGT GN+++C CY + T K
Sbjct: 43 LECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVC-PCYNNWKTKSGGPK 101
Query: 64 CP 65
CP
Sbjct: 102 CP 103
>sp|Q925I4|TS1R2_MOUSE Taste receptor type 1 member 2 OS=Mus musculus GN=Tas1r2 PE=2 SV=1
Length = 843
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 14 CSLHSRPNLCNRACG--TCCVRCKCVPPGTAGNREL----CGSCYTDMTTHGNRTKC 64
CS +P + G CC C PPGT NR + C SC M ++ N C
Sbjct: 499 CSKSCQPGQMKKPIGLHPCCFECVDCPPGTYLNRSVDEFNCLSCPGSMWSYKNNIAC 555
>sp|A3QP08|TS1R2_SAISC Taste receptor type 1 member 2 OS=Saimiri sciureus GN=TAS1R2 PE=3
SV=1
Length = 834
Score = 32.3 bits (72), Expect = 0.79, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 9 LCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGT----AGNRELCGSCYTDMTTHGNRTKC 64
+C +RC + TCC C PPGT N C +C ++ +H + T C
Sbjct: 489 MCSKRCQSGQKKKPV--GIHTCCFECIDCPPGTFLNQTANEYDCQACPSNEWSHQSETSC 546
>sp|Q5WHS8|OBG_BACSK GTPase obg OS=Bacillus clausii (strain KSM-K16) GN=obg PE=3 SV=1
Length = 428
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 37 VPPGTAGNRELCGSCYTDMTTHGNR 61
VPPGT E G+ D+TTHG R
Sbjct: 89 VPPGTMVTDEETGALLADLTTHGQR 113
>sp|Q6GKX7|GASAC_ARATH Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12
PE=3 SV=1
Length = 106
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGN 60
++ +C C+ RCS S C C CC +C CVP GT G++E C CY + TT
Sbjct: 43 LKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEEC-PCYNNWTTKEG 101
Query: 61 RTKCP 65
KCP
Sbjct: 102 GPKCP 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.525
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,369,841
Number of Sequences: 539616
Number of extensions: 884322
Number of successful extensions: 3110
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 3053
Number of HSP's gapped (non-prelim): 92
length of query: 65
length of database: 191,569,459
effective HSP length: 37
effective length of query: 28
effective length of database: 171,603,667
effective search space: 4804902676
effective search space used: 4804902676
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)