BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035414
MPFRKIVEVEPPSPLRYLMGAVIMMIGVVLPVGYMMFRNKRVPSTSSYSKQTNKVLI

High Scoring Gene Products

Symbol, full name Information P value
AT4G16695 protein from Arabidopsis thaliana 8.0e-21

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035414
        (57 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1005716316 - symbol:AT4G16695 "AT4G16695" spec...   245  8.0e-21   1


>TAIR|locus:1005716316 [details] [associations]
            symbol:AT4G16695 "AT4G16695" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
            evidence=IDA] GO:GO:0005794 EMBL:CP002687 EMBL:AK118126
            IPI:IPI00527387 RefSeq:NP_849396.1 UniGene:At.47049
            EnsemblPlants:AT4G16695.1 GeneID:827372 KEGG:ath:AT4G16695
            TAIR:At4g16695 eggNOG:NOG318916 HOGENOM:HOG000131676
            InParanoid:Q8GXP2 OMA:YSKQTNK PhylomeDB:Q8GXP2
            ProtClustDB:CLSN2690960 Genevestigator:Q8GXP2 Uniprot:Q8GXP2
        Length = 57

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 46/57 (80%), Positives = 53/57 (92%)

Query:     1 MPFRKIVEVEPPSPLRYLMGAVIMMIGVVLPVGYMMFRNKRVPSTSSYSKQTNKVLI 57
             MPF+ ++EVEPPS LRYL+G+ +MMIGVVLPVGYMMFRNKRVP +SSYSKQTNKVLI
Sbjct:     1 MPFKTVIEVEPPSLLRYLIGSAVMMIGVVLPVGYMMFRNKRVPFSSSYSKQTNKVLI 57


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       57        57   0.00091  102 3  11 22  0.42    27
                                                     29  0.44    27


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  334 (36 KB)
  Total size of DFA:  56 KB (2058 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.81u 0.20s 7.01t   Elapsed:  00:00:00
  Total cpu time:  6.81u 0.20s 7.01t   Elapsed:  00:00:00
  Start:  Thu May  9 15:22:07 2013   End:  Thu May  9 15:22:07 2013

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