Query 035416
Match_columns 62
No_of_seqs 120 out of 1021
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 03:57:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035416.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035416hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hyv_A Annexin A2; calcium-bin 99.9 3.6E-22 1.2E-26 127.7 7.9 61 1-61 87-147 (308)
2 1hm6_A Annexin 1; phospholipid 99.9 5.2E-22 1.8E-26 128.7 7.2 61 1-61 127-187 (346)
3 1n00_A Annexin GH1; membrane-b 99.9 7.6E-22 2.6E-26 126.7 7.0 60 1-60 29-88 (321)
4 1axn_A Annexin III; annexin fa 99.9 7.6E-22 2.6E-26 126.8 6.9 61 1-61 103-163 (323)
5 1w3w_A Annexin A8; coagulation 99.9 9.4E-22 3.2E-26 126.7 6.8 61 1-61 34-94 (327)
6 1dm5_A Annexin XII E105K mutan 99.9 8.7E-22 3E-26 126.1 6.3 60 1-60 25-84 (315)
7 1yii_A Annexin A5, annexin V, 99.8 1.1E-21 3.6E-26 125.9 6.3 61 1-61 27-87 (320)
8 1w3w_A Annexin A8; coagulation 99.8 5.4E-22 1.9E-26 127.8 4.7 61 1-61 266-326 (327)
9 1dm5_A Annexin XII E105K mutan 99.8 1E-21 3.4E-26 125.8 4.5 60 1-60 256-315 (315)
10 2zhj_A Annexin A4; zynogen gra 99.8 3.6E-21 1.2E-25 123.6 6.2 60 1-60 102-161 (322)
11 2zhj_A Annexin A4; zynogen gra 99.8 4.6E-21 1.6E-25 123.0 6.2 61 1-61 30-90 (322)
12 1n00_A Annexin GH1; membrane-b 99.8 1.4E-21 4.9E-26 125.4 3.5 61 1-61 259-319 (321)
13 1yii_A Annexin A5, annexin V, 99.8 9.4E-21 3.2E-25 121.5 7.0 60 1-60 99-158 (320)
14 1hm6_A Annexin 1; phospholipid 99.8 7.2E-21 2.5E-25 123.4 5.2 61 1-61 286-346 (346)
15 2hyv_A Annexin A2; calcium-bin 99.8 7.6E-21 2.6E-25 121.5 4.7 61 1-61 247-307 (308)
16 1axn_A Annexin III; annexin fa 99.8 1.9E-20 6.5E-25 120.3 6.2 61 1-61 31-91 (323)
17 3chj_A Alpha-14 giardin; calci 99.8 8.8E-21 3E-25 122.6 4.1 60 1-60 94-155 (337)
18 1m9i_A Annexin VI; calcium-bin 99.8 3.3E-20 1.1E-24 128.0 7.1 61 1-61 447-507 (672)
19 1m9i_A Annexin VI; calcium-bin 99.8 2.2E-20 7.7E-25 128.9 6.2 61 1-61 611-671 (672)
20 2ii2_A Alpha-11 giardin; helix 99.8 2.5E-19 8.4E-24 114.6 5.2 59 1-60 88-148 (310)
21 4evf_A Alpha-1 giardin, giardi 99.8 4.1E-19 1.4E-23 112.8 5.3 59 1-61 15-74 (295)
22 4evf_A Alpha-1 giardin, giardi 99.8 4.7E-19 1.6E-23 112.5 4.6 59 1-60 86-146 (295)
23 3chj_A Alpha-14 giardin; calci 99.7 4.1E-18 1.4E-22 110.1 4.2 58 1-61 255-314 (337)
24 2ii2_A Alpha-11 giardin; helix 99.7 3.4E-17 1.2E-21 104.7 6.6 57 3-59 170-227 (310)
25 1wj7_A Hypothetical protein (R 67.3 13 0.00044 20.2 4.5 53 9-61 25-79 (104)
26 1iur_A KIAA0730 protein; DNAJ 51.2 7.6 0.00026 20.1 1.5 31 3-33 10-40 (88)
27 3frr_A Uncharacterized protein 50.4 12 0.0004 22.4 2.4 28 21-48 117-144 (191)
28 1j2j_B ADP-ribosylation factor 50.3 18 0.00062 16.8 2.6 27 9-35 11-37 (45)
29 2kwp_A Transcription elongatio 48.5 21 0.00072 19.8 3.2 26 5-37 17-42 (129)
30 2jak_A Serine/threonine-protei 47.0 23 0.00079 23.3 3.6 42 10-51 178-221 (392)
31 3t57_A UDP-N-acetylglucosamine 46.5 15 0.00052 22.6 2.6 26 18-43 231-262 (305)
32 3ggy_A Increased sodium tolera 44.1 12 0.00042 22.3 1.8 28 21-48 123-150 (193)
33 1j2z_A Acyl-[acyl-carrier-prot 41.8 32 0.0011 20.8 3.5 26 18-43 202-229 (270)
34 3l34_A Sensor protein; two-com 40.9 25 0.00086 19.8 2.7 47 11-57 29-83 (130)
35 3ju1_A Enoyl-COA hydratase/iso 39.3 71 0.0024 20.8 5.0 46 13-58 312-365 (407)
36 3r0s_A Acyl-[acyl-carrier-prot 39.2 61 0.0021 19.4 4.5 36 5-43 196-232 (266)
37 4e6u_A Acyl-[acyl-carrier-prot 39.1 34 0.0012 20.4 3.3 25 19-43 210-236 (265)
38 3ks4_A Polymerase cofactor VP3 38.8 14 0.00049 21.7 1.5 42 2-43 77-122 (184)
39 2rhf_A DNA helicase RECQ; HRDC 37.6 11 0.00039 18.6 0.8 39 7-45 31-74 (77)
40 2npp_B PP2A, B subunit, serine 35.4 37 0.0013 22.7 3.2 42 10-51 166-209 (449)
41 3fke_A Polymerase cofactor VP3 31.8 16 0.00056 20.3 0.9 41 2-42 22-66 (129)
42 3hsq_A Acyl-[acyl-carrier-prot 31.7 54 0.0018 19.4 3.3 25 19-43 203-229 (259)
43 3fys_A Protein DEGV; fatty aci 31.7 10 0.00034 24.1 0.0 39 19-57 99-137 (315)
44 2dt8_A DEGV family protein; fa 31.0 12 0.00041 23.1 0.3 39 19-57 65-103 (280)
45 3nyi_A FAT acid-binding protei 29.7 15 0.00052 22.9 0.6 39 19-57 69-107 (297)
46 4eqy_A Acyl-[acyl-carrier-prot 29.7 59 0.002 19.6 3.3 25 19-43 225-251 (283)
47 3pl5_A SMU_165, putative uncha 28.7 18 0.00061 23.0 0.8 39 19-57 100-138 (320)
48 1dd4_C 50S ribosomal protein L 28.4 47 0.0016 14.8 3.8 29 9-37 4-32 (40)
49 4afi_A AP-3 complex subunit de 27.9 27 0.00093 20.2 1.5 37 21-57 130-166 (173)
50 2ctp_A DNAJ homolog subfamily 26.3 13 0.00044 18.3 -0.2 22 12-33 10-31 (78)
51 1zav_U 50S ribosomal protein L 26.2 45 0.0016 13.9 3.8 28 8-35 3-30 (30)
52 3bpt_A 3-hydroxyisobutyryl-COA 26.2 1.3E+02 0.0044 19.1 5.9 49 10-58 264-320 (363)
53 3oao_A Uncharacterized protein 25.4 66 0.0022 18.2 2.8 33 10-42 71-104 (147)
54 3fga_B Serine/threonine-protei 25.4 45 0.0015 22.1 2.3 37 10-46 133-171 (403)
55 4aj5_1 SKA3, spindle and kinet 24.8 45 0.0015 18.0 1.8 20 12-31 79-98 (101)
56 3osj_A Phycobilisome LCM core- 24.4 14 0.00047 21.3 -0.3 20 19-38 21-41 (147)
57 1r4t_A Exoenzyme S; EXOS, GAP, 23.9 67 0.0023 18.6 2.6 46 3-48 91-138 (153)
58 1u14_A Hypothetical UPF0244 pr 23.6 28 0.00095 20.3 0.9 22 15-36 7-28 (172)
59 3k6g_A Telomeric repeat-bindin 23.5 78 0.0027 17.3 2.7 31 29-59 19-51 (111)
60 2lwd_A Probable ATP-dependent 23.4 48 0.0016 17.5 1.8 43 19-61 42-89 (100)
61 1pzx_A Hypothetical protein AP 23.3 24 0.00083 21.8 0.7 39 19-57 66-104 (289)
62 3ot6_A Enoyl-COA hydratase/iso 23.0 1.1E+02 0.0037 18.0 3.5 36 10-45 192-227 (232)
63 2g7z_A Conserved hypothetical 22.1 26 0.0009 21.6 0.7 38 19-56 69-107 (282)
64 2dn9_A DNAJ homolog subfamily 22.0 17 0.00059 17.8 -0.1 22 12-33 10-31 (79)
65 2ctr_A DNAJ homolog subfamily 22.0 28 0.00096 17.5 0.7 22 12-33 10-31 (88)
66 1zwy_A Hypothetical UPF0244 pr 21.6 34 0.0012 20.2 1.1 21 15-35 17-37 (185)
67 3kj0_B BCL-2-like protein 11; 21.2 57 0.002 13.2 2.1 16 20-35 11-26 (27)
68 2ky4_A Phycobilisome linker po 21.1 68 0.0023 18.4 2.2 20 19-38 12-32 (149)
69 1hdj_A Human HSP40, HDJ-1; mol 21.0 31 0.001 16.7 0.7 14 20-33 14-27 (77)
70 2vx8_A Nucleoporin-like protei 20.8 41 0.0014 19.4 1.3 18 21-38 120-137 (169)
71 1faf_A Large T antigen; J doma 20.8 40 0.0014 16.7 1.1 24 10-33 12-37 (79)
72 2o8i_A AGR_C_4230P, hypothetic 20.7 57 0.002 18.7 1.9 26 21-46 98-123 (165)
73 4b93_A Vesicle-associated memb 20.5 46 0.0016 19.3 1.5 35 21-55 78-112 (189)
74 1he1_A Exoenzyme S, EXOS; sign 20.0 83 0.0028 17.8 2.4 33 4-36 90-122 (135)
No 1
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=99.87 E-value=3.6e-22 Score=127.68 Aligned_cols=61 Identities=38% Similarity=0.701 Sum_probs=59.2
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|||+||||.+||+|||+|||.|++.|+++|+++||++|+++|++++||+|+++|++|+.++
T Consensus 87 mkG~Gtde~~LieIL~~Rs~~q~~~Ik~aY~~~y~~~L~~di~se~sG~f~~ll~~l~~~~ 147 (308)
T 2hyv_A 87 MKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGR 147 (308)
T ss_dssp TSTTCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHSSCHHHHHHHTCCHHHHHHHHHHHTCC
T ss_pred hhcCCCCHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCHHHHHhhccCccHHHHHHHHHccc
Confidence 7999999999999999999999999999999999999999999999999999999999753
No 2
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=99.86 E-value=5.2e-22 Score=128.70 Aligned_cols=61 Identities=39% Similarity=0.647 Sum_probs=59.1
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|||+||||.+||+|||+|||.|++.|+++|+++||++|+++|++++||+|+++|++|+.++
T Consensus 127 mkG~GTde~~LieIL~~Rsn~q~~~Ik~aY~~~y~~~Le~di~se~sG~f~~ll~~L~~~~ 187 (346)
T 1hm6_A 127 MKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDLAKDITSDTSGDYQKALLSLAKGD 187 (346)
T ss_dssp HSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHTSCCCHHHHHHHHCCHHHHHHHHHHHTTC
T ss_pred hhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhchhHHHHHhhccCCcHHHHHHHHhhcc
Confidence 6999999999999999999999999999999999999999999999999999999999853
No 3
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=99.86 E-value=7.6e-22 Score=126.66 Aligned_cols=60 Identities=20% Similarity=0.403 Sum_probs=58.4
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGP 60 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~ 60 (62)
|||+||||++||+||++|||.|++.|+++|++.||++|+++|++++||+|+++|++|+.+
T Consensus 29 ~kG~Gtde~~lieIL~~rs~~q~~~I~~aY~~~y~~~L~~dl~se~sG~f~~ll~~l~~~ 88 (321)
T 1n00_A 29 FSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALDKELSNDFERLVLLWALD 88 (321)
T ss_dssp TSSSSCCHHHHHHHHTTCCHHHHHHHHHHHHHHHSSCHHHHHHHHSCHHHHHHHHHHHSC
T ss_pred hCCCCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhhHHHHHHHHhcCchHHHHHHHHcCC
Confidence 799999999999999999999999999999999999999999999999999999999865
No 4
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=99.86 E-value=7.6e-22 Score=126.81 Aligned_cols=61 Identities=43% Similarity=0.690 Sum_probs=58.9
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|||+||||.+||+|||+|||.|+++|+++|+++||++|+++|++++||+|+++|++|+.++
T Consensus 103 ~kG~Gtde~~lieIL~~Rs~~q~~~I~~aY~~~y~~~Le~di~se~sG~~~~ll~~l~~~~ 163 (323)
T 1axn_A 103 MKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLADGR 163 (323)
T ss_dssp HCSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHTTC
T ss_pred hccCCCCHHHHhHHhcCCCHHHHHHHHHHHHHhhCcCHHHHHHHhcCcHHHHHHHHHHhcc
Confidence 6899999999999999999999999999999999999999999999999999999998753
No 5
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=99.85 E-value=9.4e-22 Score=126.67 Aligned_cols=61 Identities=30% Similarity=0.633 Sum_probs=58.9
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|||+||||++||+||++|||.|++.|+++|++.||++|+++|++++||+|++++++|+.++
T Consensus 34 ~kG~GtdE~~lieIL~~Rs~~q~~~I~~aY~~~yg~~L~~dlkse~sG~f~~ll~~l~~~~ 94 (327)
T 1w3w_A 34 MKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIVALMYPP 94 (327)
T ss_dssp HSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHSCT
T ss_pred hcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHHHHcCCcHHHHHHHhcCCH
Confidence 6999999999999999999999999999999999999999999999999999999998754
No 6
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=99.85 E-value=8.7e-22 Score=126.12 Aligned_cols=60 Identities=42% Similarity=0.694 Sum_probs=58.5
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGP 60 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~ 60 (62)
|||+||||++||+||++|||.|++.|+++|+++||++|+++|++++||+|+++|++|+.+
T Consensus 25 ~kG~Gtde~~lieIL~~rs~~q~~~I~~~Y~~~yg~~L~~dl~se~sG~f~~ll~~l~~~ 84 (315)
T 1dm5_A 25 MKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRK 84 (315)
T ss_dssp HSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHSC
T ss_pred hcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCCCHHHHHHhhcCccHHHHHHHHccC
Confidence 699999999999999999999999999999999999999999999999999999999875
No 7
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=99.85 E-value=1.1e-21 Score=125.86 Aligned_cols=61 Identities=30% Similarity=0.665 Sum_probs=58.9
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|||+||||++||+||++|||.|++.|+++|++.||++|+++|++++||+|++++++|+.++
T Consensus 27 ~kG~Gtde~~lieIL~~rs~~q~~~I~~~Y~~~~g~~L~~dl~~e~sG~f~~ll~~l~~~~ 87 (320)
T 1yii_A 27 MKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVDDLKSELTGKFETLMVSLMRPA 87 (320)
T ss_dssp HSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSCCHHHHHHHHCCHHHHHHHHHHHSCH
T ss_pred hcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHhhhcCchHHHHHHHHccCh
Confidence 6999999999999999999999999999999999999999999999999999999998753
No 8
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=99.85 E-value=5.4e-22 Score=127.77 Aligned_cols=61 Identities=51% Similarity=0.823 Sum_probs=59.7
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|||+|||+++||+|+++|++.+|..|+++|+++||++|.++|+++|||||+++|++||+++
T Consensus 266 mkg~GTdd~~LiriivsR~e~dl~~Ik~~y~~~yg~sL~~~I~~~tsGdy~~~LlaL~~~~ 326 (327)
T 1w3w_A 266 MKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKTLSSMIMEDTSGDYKNALLSLVGSD 326 (327)
T ss_dssp HSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHCCC
T ss_pred ccCCCCChhHeeeeeeECCHHHHHHHHHHHHHHhCCcHHHHHhhhCChHHHHHHHHHhCCC
Confidence 7999999999999999999999999999999999999999999999999999999999976
No 9
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=99.84 E-value=1e-21 Score=125.85 Aligned_cols=60 Identities=43% Similarity=0.806 Sum_probs=58.5
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGP 60 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~ 60 (62)
|+|+|||++.||+|+++|++.+|..|+++|+++||++|.++|+++|||||+++|++||++
T Consensus 256 m~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~~yg~~L~~~I~~etsGdy~~~Llal~~~ 315 (315)
T 1dm5_A 256 MKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH 315 (315)
T ss_dssp HCTTCCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHCC
T ss_pred hhcCCCCHHHHhHHHHhcCHHHHHHHHHHHHHHhCCcHHHHHhhhCcHHHHHHHHHHhCC
Confidence 689999999999999999999999999999999999999999999999999999999975
No 10
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=99.84 E-value=3.6e-21 Score=123.57 Aligned_cols=60 Identities=30% Similarity=0.568 Sum_probs=58.0
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGP 60 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~ 60 (62)
|+|+||||.+||+|||+|||.|+++|+++|++.||++|+++|++++||+|+++|++|+.+
T Consensus 102 ~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~~e~sG~~~~~l~~ll~~ 161 (322)
T 2zhj_A 102 MKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEEDICSDTSFMFQRVLVSLTAG 161 (322)
T ss_dssp HSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHHC
T ss_pred hhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHHHHHhhcCchHHHHHHHHHhh
Confidence 589999999999999999999999999999999999999999999999999999999864
No 11
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=99.83 E-value=4.6e-21 Score=123.04 Aligned_cols=61 Identities=31% Similarity=0.596 Sum_probs=58.7
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|||+||||++||+||++|||.|++.|+++|++.||++|.++|++++||+|++++++|+.++
T Consensus 30 ~kG~GtdE~~li~IL~~rs~~qr~~I~~~Y~~~~g~~L~~~lkselsG~fe~~l~~l~~~~ 90 (322)
T 2zhj_A 30 MKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQVILGMMTPT 90 (322)
T ss_dssp HSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHCSCHHHHHHHHCCHHHHHHHHHHHSCH
T ss_pred hcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCchHHHHHHhhcCccHHHHHHHHcCCc
Confidence 6999999999999999999999999999999999999999999999999999999998653
No 12
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=99.83 E-value=1.4e-21 Score=125.38 Aligned_cols=61 Identities=38% Similarity=0.646 Sum_probs=59.4
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|+|+|||+.+||+|+++|++.+|..|+++|+++||++|.++|+++|||||+++|++|++++
T Consensus 259 m~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~~yg~sL~~~I~~etsGdy~~~Llal~~~~ 319 (321)
T 1n00_A 259 INRRGTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIVKDTHGDYEKLLLVLAGHV 319 (321)
T ss_dssp HTTCCSCTTHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHTTTTCCHHHHHHHHHHTTCC
T ss_pred hccCCCCHHHHHHHHHHcCHHHHHHHHHHHHHHhCCChHHHHhhhCCHHHHHHHHHHhCcc
Confidence 6899999999999999999999999999999999999999999999999999999999875
No 13
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=99.83 E-value=9.4e-21 Score=121.48 Aligned_cols=60 Identities=35% Similarity=0.664 Sum_probs=58.1
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGP 60 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~ 60 (62)
|+|+||||.+||+||++|||.|+.+|+++|++.||++|+++|++++||+|+++|++|+.+
T Consensus 99 ~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~di~~e~sG~~~~~l~~l~~~ 158 (320)
T 1yii_A 99 IKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLLQA 158 (320)
T ss_dssp HSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHTT
T ss_pred hccCCCchHHHhHHHhcCCHHHHHHHHHHHHHhhCcCHHHHHHhhcCCcHHHHHHHHHhh
Confidence 589999999999999999999999999999999999999999999999999999999874
No 14
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=99.82 E-value=7.2e-21 Score=123.37 Aligned_cols=61 Identities=48% Similarity=0.769 Sum_probs=58.0
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|+|+||||.+||+||++||+.||..|+++|+++||++|+++|++++||||+++|++||+++
T Consensus 286 ~~g~GTde~~lirIlvsRs~~dL~~I~~~Y~~~yg~sL~~~I~~etsGdy~~~Llal~~~~ 346 (346)
T 1hm6_A 286 MKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLYGISLCQAILDETKGDYEKILVALCGGD 346 (346)
T ss_dssp HSSSSCCHHHHHHHHHHTTTTTHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHC--
T ss_pred hcCCCCCHHHHhHHHhhCCHHHHHHHHHHHHHHhCCCHHHHHHhhCChHHHHHHHHHhCCC
Confidence 5899999999999999999999999999999999999999999999999999999999875
No 15
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=99.82 E-value=7.6e-21 Score=121.52 Aligned_cols=61 Identities=43% Similarity=0.745 Sum_probs=59.4
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|+|.|||+.+||+|+++||+.||..|+++|+++||++|+++|++++||||+++|++||+++
T Consensus 247 ~~g~GTde~~lirilv~Rs~~~l~~I~~~Y~~~yg~~L~~~I~~e~sGdy~~~Llal~~~~ 307 (308)
T 2hyv_A 247 MKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGD 307 (308)
T ss_dssp HSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHHTSC
T ss_pred hccCCCCHHHHHHHHHhcCHHHHHHHHHHHHHHhCCcHHHHHHhhCChHHHHHHHHHhCCC
Confidence 6899999999999999999999999999999999999999999999999999999999986
No 16
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=99.82 E-value=1.9e-20 Score=120.30 Aligned_cols=61 Identities=30% Similarity=0.660 Sum_probs=58.6
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|||+||||++||+||++||+.|++.|+++|++.||++|.++|++++||+|++++++++.++
T Consensus 31 ~kG~Gtde~~li~IL~~rs~~qr~~I~~~Y~~~~g~dL~~~lk~elsG~fe~~l~~l~~~p 91 (323)
T 1axn_A 31 IRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVALVTPP 91 (323)
T ss_dssp HSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSCCHHHHHHHHCCHHHHHHHHHHHSCH
T ss_pred hcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHCcCHHHHHhhhcCccHHHHHHHHhcCc
Confidence 6899999999999999999999999999999999999999999999999999999988653
No 17
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=99.81 E-value=8.8e-21 Score=122.63 Aligned_cols=60 Identities=27% Similarity=0.459 Sum_probs=57.8
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHH--HHHHHHhcCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNY--RAFLLSLLGP 60 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~--~~~ll~l~~~ 60 (62)
|||+||||++||+|||+|||.|+..|+++|+++||++|+++|++++||+| +++|++|+.+
T Consensus 94 mkG~GTde~~LieIl~tRs~~~l~~Ik~~Y~~~y~~sL~~di~~~tsG~~~w~~lLl~ll~~ 155 (337)
T 3chj_A 94 TKGAGTDEKCLVDVLLTIETHEVREIRQLYYQLYNDSLGDVVRKDCGDKYMWAKLINAVATG 155 (337)
T ss_dssp HSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHHHHHHHHCSSSHHHHHHHHHHHC
T ss_pred ccCCCCChHHhhhhhhcCCHHHHHHHHHHHHHHHhHHHHHHHHhhcCCCchHHHHHHHHHhc
Confidence 68999999999999999999999999999999999999999999999999 9999997654
No 18
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=99.81 E-value=3.3e-20 Score=128.05 Aligned_cols=61 Identities=39% Similarity=0.729 Sum_probs=59.0
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|||.||||.+||+|||+|||.|+.+|+++|++.|+++|++||.+++||+|+++|++|+++.
T Consensus 447 ~kg~gTde~~LiEIL~tRsn~ei~~ik~aY~~~y~~sLe~di~~dtsG~~~~llv~L~~~~ 507 (672)
T 1m9i_A 447 MEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKSLEDALSSDTSGHFRRILISLATGH 507 (672)
T ss_dssp HSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHTTCC
T ss_pred HhccCCCHHHHHHhhhcCCHHHHHHHHHHHHHHHCcCHHHHHHhccchHHHHHHHHHHhcc
Confidence 6899999999999999999999999999999999999999999999999999999999763
No 19
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=99.81 E-value=2.2e-20 Score=128.88 Aligned_cols=61 Identities=48% Similarity=0.803 Sum_probs=59.9
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|||+|||+.+||+|+++|++.+|..|+.+|+++||++|.++|+++|||||+++|++||+++
T Consensus 611 mkG~GT~d~~LiRiiVsR~eiDl~~Ik~~y~~~ygksL~~~I~~etsGdY~~~LlaL~g~~ 671 (672)
T 1m9i_A 611 MKGAGTDDKTLTRIMVSRSEIDLLNIRREFIEKYDKSLHQAIEGDTSGDFLKALLALCGGE 671 (672)
T ss_dssp TSSSSCCHHHHHHHHHHSTTTTHHHHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHSCSC
T ss_pred hccCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhCCCHHHHHhhcCchHHHHHHHHHhCCC
Confidence 8999999999999999999999999999999999999999999999999999999999986
No 20
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=99.77 E-value=2.5e-19 Score=114.56 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=56.8
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcccH--HHHHHHHHhcCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSETSG--NYRAFLLSLLGP 60 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG--~~~~~ll~l~~~ 60 (62)
|||+ |||.+||+|||+|||.|+.+|+++|++.||++|+++|.+++|| +|+++|++|+.+
T Consensus 88 ~kg~-tde~~lieIL~~Rs~~~l~~I~~aY~~~y~~~Le~di~~e~sg~~~~~~ll~~ll~~ 148 (310)
T 2ii2_A 88 MKNV-NDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLLQDFVDQIPLTSAASYLCHLAIRE 148 (310)
T ss_dssp HHSS-CCHHHHHHHHHSCCHHHHHHHHHHHHHHHSSCHHHHHHHHCCSCSHHHHHHHHHHHC
T ss_pred hhCC-CcHHHHHHHHHcCCHHHHHHHHHHHHHHHCcCHHHHHHhhcCCchHHHHHHHHHHhc
Confidence 5788 9999999999999999999999999999999999999999999 999999999865
No 21
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=99.77 E-value=4.1e-19 Score=112.80 Aligned_cols=59 Identities=17% Similarity=0.353 Sum_probs=55.7
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcc-cHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSET-SGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~-sG~~~~~ll~l~~~~ 61 (62)
||| |||++||+||++|||.|++.|+++|++.||++|+++|++++ ||+|++++++++.++
T Consensus 15 ~kG--tde~~li~IL~~rs~~qr~~I~~~Y~~~yg~~L~~~lk~el~sG~f~~~l~~l~~~~ 74 (295)
T 4evf_A 15 IDA--KDEVQIAFIASEYSAESREKIAKAYVASYGKELPDDIKKALKGGSEESLLMDLFSDR 74 (295)
T ss_dssp HHT--TCHHHHHHHHHTSCHHHHHHHHHHHHHHHSSCHHHHHHHHSCCSHHHHHHHHHTSCH
T ss_pred HcC--CCHHHHHHHHhCCCHHHHHHHHHHHHHHHCcCHHHHHHhhccCCCHHHHHHHHccCc
Confidence 464 99999999999999999999999999999999999999999 899999999998763
No 22
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=99.76 E-value=4.7e-19 Score=112.50 Aligned_cols=59 Identities=15% Similarity=0.312 Sum_probs=56.5
Q ss_pred CCcccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcc--cHHHHHHHHHhcCC
Q 035416 1 MKGLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSET--SGNYRAFLLSLLGP 60 (62)
Q Consensus 1 mkg~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~--sG~~~~~ll~l~~~ 60 (62)
|+|. |||.+||+||++|||.|+.+|+++|++.||++|+++|++++ ||+|+++|++++.+
T Consensus 86 ~kg~-tde~~lieIL~~Rs~~~l~~I~~~Y~~~y~~~Le~di~~e~~~sG~~~~~L~~ll~~ 146 (295)
T 4evf_A 86 LSGR-NDHMAFFDTVILCTPEDWHETVAAYTRMFKKPLVEDFMKDVGRKEDWCLLMEKWMAH 146 (295)
T ss_dssp HHSS-CCHHHHHHHHTSCCHHHHHHHHHHHHHHHSSCHHHHHHHHHCSSSHHHHHHHHHHHT
T ss_pred hhCC-CCHHHHHHHHHcCCHHHHHHHHHHHHHhccccHHHHHHhhcccCCcHHHHHHHHHhc
Confidence 5787 99999999999999999999999999999999999999999 99999999999864
No 23
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=99.71 E-value=4.1e-18 Score=110.15 Aligned_cols=58 Identities=24% Similarity=0.335 Sum_probs=55.7
Q ss_pred CCcccCCHHHHHHHHhh--CCHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHhcCCC
Q 035416 1 MKGLGTDDTTLVRVIVT--RTEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 1 mkg~gtde~~Li~il~~--rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l~~~~ 61 (62)
|+|+|| +..||+|+++ |++ |..|+++|+++||++|.++|+++|||||+++|++||+++
T Consensus 255 m~g~GT-d~~Liriivs~~r~e--l~~Ik~~Y~~~yg~sL~~~I~~etsGdy~~~LlaL~~~~ 314 (337)
T 3chj_A 255 FAGSGS-DSNRLNRITAMHFRE--CKGCKYYYKKVYGQAFDERCATELKGVYGDAIKLLWEPV 314 (337)
T ss_dssp TCSSSC-CHHHHHHHHHHHTTT--CTTHHHHHHHHHSSCHHHHHHHHCCHHHHHHHHHHTSCC
T ss_pred hcCCCc-hhhHhhhhhccchhh--HHHHHHHHHHHhCCcHHHHHHhhCChHHHHHHHHHhCCC
Confidence 799999 9999999999 888 999999999999999999999999999999999999875
No 24
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=99.70 E-value=3.4e-17 Score=104.68 Aligned_cols=57 Identities=18% Similarity=0.158 Sum_probs=54.8
Q ss_pred cccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcc-cHHHHHHHHHhcC
Q 035416 3 GLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSET-SGNYRAFLLSLLG 59 (62)
Q Consensus 3 g~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~-sG~~~~~ll~l~~ 59 (62)
++||||.++|+||++||+.|+.+|+++|++.||++|+++|++++ ||+|+++|++++.
T Consensus 170 ~~Gtde~~~i~Il~~Rs~~~L~~i~~~Y~~~~g~~l~~~I~~e~~sG~~~~~Ll~iv~ 227 (310)
T 2ii2_A 170 ADEPDHEAVVRLIITSTADEYKEINHRFEVLTGKSVQEAIETRYADKENARGLCIAHY 227 (310)
T ss_dssp SSSCCHHHHHHHHHHCCHHHHHHHHHHHHHHHSSCHHHHHHHHCCSHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCccHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999 9999999999863
No 25
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=67.32 E-value=13 Score=20.22 Aligned_cols=53 Identities=15% Similarity=0.181 Sum_probs=37.7
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHh--hcccHHHHHHHHHhcCCC
Q 035416 9 TTLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVH--SETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 9 ~~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~--~~~sG~~~~~ll~l~~~~ 61 (62)
-.|-+++...++.++..--+.-.++.|.+-++++. .++.||...++..|+.+.
T Consensus 25 ~rLAq~i~~~~d~d~eekVk~L~EmtG~seeeAr~AL~~~ngDl~~AI~~Lleg~ 79 (104)
T 1wj7_A 25 IRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGN 79 (104)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred HHHHHHHhcCCcccHHHHHHHHHHhhCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 34556776666666554446667778888777776 588899999999888653
No 26
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=51.20 E-value=7.6 Score=20.08 Aligned_cols=31 Identities=10% Similarity=-0.053 Sum_probs=23.0
Q ss_pred cccCCHHHHHHHHhhCCHHHHHHHHHHHHhc
Q 035416 3 GLGTDDTTLVRVIVTRTEIDMQYIKAEYSKK 33 (62)
Q Consensus 3 g~gtde~~Li~il~~rs~~~l~~i~~~Y~~~ 33 (62)
+.+.+...+.+||.-...+....|+.+|+++
T Consensus 10 ~~~~~~~~~y~vLgv~~~as~~eIKkaYrkl 40 (88)
T 1iur_A 10 PRGSILKEVTSVVEQAWKLPESERKKIIRRL 40 (88)
T ss_dssp CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHH
T ss_pred CCCccHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 3445567777888877677778899999865
No 27
>3frr_A Uncharacterized protein KIAA0174; ESCRT, ESCRT-III, CHMP, IST1, alternative splicing, phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3frs_A
Probab=50.44 E-value=12 Score=22.36 Aligned_cols=28 Identities=14% Similarity=0.353 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhccCccHHHHHhhcccH
Q 035416 21 IDMQYIKAEYSKKYKKTLTDAVHSETSG 48 (62)
Q Consensus 21 ~~l~~i~~~Y~~~y~~~L~~~i~~~~sG 48 (62)
.++..|++.|..+||++......+...|
T Consensus 117 pEL~~ir~~l~~KyGkeF~~~a~e~~~~ 144 (191)
T 3frr_A 117 AELKIVADQLCAKYSKEYGKLCRTNQIG 144 (191)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHTTTTS
T ss_pred hHHHHHHHHHHHHhCHHHHHHHHHcCCC
Confidence 6999999999999999999887654333
No 28
>1j2j_B ADP-ribosylation factor binding protein GGA1, ADP-ribosylation factor 1; protein transport; HET: GTP; 1.60A {Homo sapiens} SCOP: a.7.8.1
Probab=50.31 E-value=18 Score=16.76 Aligned_cols=27 Identities=11% Similarity=0.153 Sum_probs=21.0
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHhccC
Q 035416 9 TTLVRVIVTRTEIDMQYIKAEYSKKYK 35 (62)
Q Consensus 9 ~~Li~il~~rs~~~l~~i~~~Y~~~y~ 35 (62)
+.|-++|.+..|.+++.-..-.+.+.+
T Consensus 11 k~L~~Ll~s~~P~Dlq~AN~LiK~mv~ 37 (45)
T 1j2j_B 11 KMLARLLKSSHPEDLRAANKLIKEMVQ 37 (45)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCChhhHHHHHHHHHHHhh
Confidence 456688888899999888777776664
No 29
>2kwp_A Transcription elongation protein NUSA; NMR {Escherichia coli}
Probab=48.51 E-value=21 Score=19.76 Aligned_cols=26 Identities=12% Similarity=0.239 Sum_probs=18.5
Q ss_pred cCCHHHHHHHHhhCCHHHHHHHHHHHHhccCcc
Q 035416 5 GTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKKT 37 (62)
Q Consensus 5 gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~~ 37 (62)
|.+...|++.|- .++..+|++.||.+
T Consensus 17 gI~~e~v~eaie-------~AL~~A~kk~~g~~ 42 (129)
T 2kwp_A 17 ALPREKIFEALE-------SALATATKKKYEQE 42 (129)
T ss_dssp CCCHHHHHHHHH-------HHHHHHHHHHHCSC
T ss_pred CcCHHHHHHHHH-------HHHHHHHHHhcCCc
Confidence 456667777664 37888999999854
No 30
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20
Probab=47.03 E-value=23 Score=23.34 Aligned_cols=42 Identities=12% Similarity=0.286 Sum_probs=31.0
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHhccCc--cHHHHHhhcccHHHH
Q 035416 10 TLVRVIVTRTEIDMQYIKAEYSKKYKK--TLTDAVHSETSGNYR 51 (62)
Q Consensus 10 ~Li~il~~rs~~~l~~i~~~Y~~~y~~--~L~~~i~~~~sG~~~ 51 (62)
.|++.+-+.++.|+..++....+.||+ .+...|+.....-|-
T Consensus 178 ~Ll~lfdSeDpRERd~LktiLhrIY~Kf~~~R~~Irk~i~nif~ 221 (392)
T 2jak_A 178 QLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFY 221 (392)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467778888999999999999999996 555555554443333
No 31
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=46.49 E-value=15 Score=22.62 Aligned_cols=26 Identities=19% Similarity=0.351 Sum_probs=20.9
Q ss_pred CCHHHHHHHHHHHHhccC------ccHHHHHh
Q 035416 18 RTEIDMQYIKAEYSKKYK------KTLTDAVH 43 (62)
Q Consensus 18 rs~~~l~~i~~~Y~~~y~------~~L~~~i~ 43 (62)
.++.++.+++++|+.+|. .+|.+.++
T Consensus 231 ~~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~ 262 (305)
T 3t57_A 231 FTMSEMKSLRAAYRKIFMSTETVSLSFEERLT 262 (305)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTSSTTCSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcccccCCCHHHHHH
Confidence 488999999999999997 45666653
No 32
>3ggy_A Increased sodium tolerance protein 1; ESCRT-III like, phosphoprotein, protein transport, endocytosis; 1.70A {Saccharomyces cerevisiae} PDB: 3ggz_A
Probab=44.08 E-value=12 Score=22.30 Aligned_cols=28 Identities=11% Similarity=0.138 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhccCccHHHHHhhcccH
Q 035416 21 IDMQYIKAEYSKKYKKTLTDAVHSETSG 48 (62)
Q Consensus 21 ~~l~~i~~~Y~~~y~~~L~~~i~~~~sG 48 (62)
.++..|++.+..+||++......+...|
T Consensus 123 pEL~~ir~~l~~KyGkeF~~~a~en~~g 150 (193)
T 3ggy_A 123 KELSQLKDLMAWKINVEFVNGVIADHID 150 (193)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHHhCHHHHHHHHhcCCC
Confidence 7999999999999999998877654444
No 33
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=41.80 E-value=32 Score=20.80 Aligned_cols=26 Identities=19% Similarity=0.401 Sum_probs=21.5
Q ss_pred CCHHHHHHHHHHHHhcc--CccHHHHHh
Q 035416 18 RTEIDMQYIKAEYSKKY--KKTLTDAVH 43 (62)
Q Consensus 18 rs~~~l~~i~~~Y~~~y--~~~L~~~i~ 43 (62)
-++.++..++++|+..| +.+|.+.++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 229 (270)
T 1j2z_A 202 LESKDIDFIYALYKRLFRPIPSLRESAK 229 (270)
T ss_dssp SCHHHHHHHHHHHHHHTCSSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 37889999999999998 667777764
No 34
>3l34_A Sensor protein; two-component sensor,structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 1.70A {Pseudomonas aeruginosa} PDB: 3kkb_A 3n24_A
Probab=40.91 E-value=25 Score=19.85 Aligned_cols=47 Identities=9% Similarity=0.167 Sum_probs=29.1
Q ss_pred HHHHHhh-CCHHHHHHHHHHHHhccCccHHHHHh-------hcccHHHHHHHHHh
Q 035416 11 LVRVIVT-RTEIDMQYIKAEYSKKYKKTLTDAVH-------SETSGNYRAFLLSL 57 (62)
Q Consensus 11 Li~il~~-rs~~~l~~i~~~Y~~~y~~~L~~~i~-------~~~sG~~~~~ll~l 57 (62)
||-+|.. +++..+..+++.|.+.....+..... +..+++|+.++-++
T Consensus 29 LilML~~~pd~~aL~~~qq~f~~lL~qG~a~~~~~~~~~gf~~a~~~Y~~f~~~~ 83 (130)
T 3l34_A 29 LVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHT 83 (130)
T ss_dssp HHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 4444444 58899999999999874444443322 23456677665443
No 35
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=39.31 E-value=71 Score=20.80 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=38.3
Q ss_pred HHHhhCCHHHHHHHHHHHHhccCccHHHHHhhcc--------cHHHHHHHHHhc
Q 035416 13 RVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSET--------SGNYRAFLLSLL 58 (62)
Q Consensus 13 ~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~~--------sG~~~~~ll~l~ 58 (62)
+.|..+++.-+..+++..++-...+|.+.++.|. ++||+..+-+.+
T Consensus 312 ~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGvrAfl 365 (407)
T 3ju1_A 312 ATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAKGDFCEGVRALL 365 (407)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHSSHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5678899999999999999999999998887653 567888887776
No 36
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=39.24 E-value=61 Score=19.37 Aligned_cols=36 Identities=6% Similarity=0.157 Sum_probs=24.3
Q ss_pred cCCHHHHHHHHhhCCHHHHHHHHHHHHhccC-ccHHHHHh
Q 035416 5 GTDDTTLVRVIVTRTEIDMQYIKAEYSKKYK-KTLTDAVH 43 (62)
Q Consensus 5 gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~-~~L~~~i~ 43 (62)
|.+...+.+- -++.++..++++|+..|. .++.+.+.
T Consensus 196 ~~n~~g~~r~---~~~~~~~~l~~~~~~l~~~~~~~~~~~ 232 (266)
T 3r0s_A 196 SLNLVGIRRR---FDKDEVDRLSRAFKTLFRQGDLKENAK 232 (266)
T ss_dssp EECHHHHHHH---SCHHHHHHHHHHHHHHHSSSCHHHHHH
T ss_pred ecchhheeec---CCHHHHHHHHHHHHHHHccCcHHHHHH
Confidence 3444445544 478999999999999886 34555543
No 37
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=39.05 E-value=34 Score=20.37 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=20.4
Q ss_pred CHHHHHHHHHHHHhccCc--cHHHHHh
Q 035416 19 TEIDMQYIKAEYSKKYKK--TLTDAVH 43 (62)
Q Consensus 19 s~~~l~~i~~~Y~~~y~~--~L~~~i~ 43 (62)
++.++..++++|+..|.. +|.+.++
T Consensus 210 ~~~~~~~l~~~~~~~~~~~~~~~~~~~ 236 (265)
T 4e6u_A 210 SKNTIQGLREAYKLIFKSGLTSVQAID 236 (265)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 789999999999999854 5776664
No 38
>3ks4_A Polymerase cofactor VP35; RNA-binding protein, protein-RNA complex, interferon, HOST cytoplasm, interferon antiviral system evasion; 2.40A {Reston ebolavirus} PDB: 3ks8_A
Probab=38.81 E-value=14 Score=21.71 Aligned_cols=42 Identities=26% Similarity=0.319 Sum_probs=31.4
Q ss_pred CcccCCHHHHHHHHhh--CCHHHHHHHHHHHHhcc--CccHHHHHh
Q 035416 2 KGLGTDDTTLVRVIVT--RTEIDMQYIKAEYSKKY--KKTLTDAVH 43 (62)
Q Consensus 2 kg~gtde~~Li~il~~--rs~~~l~~i~~~Y~~~y--~~~L~~~i~ 43 (62)
-|.||.-..|+.++|. +++..++.+-+.|++.. |.+-.-+|-
T Consensus 77 pG~~TaFHqLvqvI~kvgkD~~~Ldi~h~eFqa~LaeGdS~q~AlI 122 (184)
T 3ks4_A 77 PGFGTAFHQLVQVICKIGKDNNLLDTIHAEFQASLADGDSPQCALI 122 (184)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCCCchHHHHHHHHHHHccchhHHHHHHHHHHHHHhcCCCcchhHH
Confidence 5889999999988775 78888988888887653 555544444
No 39
>2rhf_A DNA helicase RECQ; HRDC, D. radiodurans, ATP-binding, hydrolase nucleotide-binding; HET: DNA; 1.10A {Deinococcus radiodurans}
Probab=37.60 E-value=11 Score=18.59 Aligned_cols=39 Identities=18% Similarity=0.301 Sum_probs=24.2
Q ss_pred CHHHHHHHHhh--CCHHHHHHHH---HHHHhccCccHHHHHhhc
Q 035416 7 DDTTLVRVIVT--RTEIDMQYIK---AEYSKKYKKTLTDAVHSE 45 (62)
Q Consensus 7 de~~Li~il~~--rs~~~l~~i~---~~Y~~~y~~~L~~~i~~~ 45 (62)
.+.+|.++... ++..+|..|. ..-.++||..+.+.|+.-
T Consensus 31 ~d~~L~~iA~~~P~t~~eL~~i~Gvg~~k~~~yG~~~l~~i~~~ 74 (77)
T 2rhf_A 31 TNATLEALAARQPRTLAELAEVPGLGEKRIEAYGERILDAINTV 74 (77)
T ss_dssp CHHHHHHHHHHCCCSHHHHTTSTTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCHHHHhhCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45666666555 3667776653 344466787777777643
No 40
>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20
Probab=35.37 E-value=37 Score=22.73 Aligned_cols=42 Identities=12% Similarity=0.286 Sum_probs=30.4
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHhccCc--cHHHHHhhcccHHHH
Q 035416 10 TLVRVIVTRTEIDMQYIKAEYSKKYKK--TLTDAVHSETSGNYR 51 (62)
Q Consensus 10 ~Li~il~~rs~~~l~~i~~~Y~~~y~~--~L~~~i~~~~sG~~~ 51 (62)
.|++.+-+.++.++..++...++.||+ .+...|+.....-|-
T Consensus 166 ~Ll~lfdSeDpRERd~LktiLhrIY~Kf~~~R~~Irk~i~nif~ 209 (449)
T 2npp_B 166 QLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFY 209 (449)
T ss_dssp HHHHTTTSSTHHHHHHHHHHHHHHHHSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777778999999999999999997 455555554443333
No 41
>3fke_A Polymerase cofactor VP35; RNA binding domain, coiled coil, interferon antiviral system evasion, RNA replication, RNA-binding; 1.40A {Zaire ebolavirus - mayinga} PDB: 3l25_A 3l26_A 3l28_A 3l27_A 3l29_A 3l2a_A
Probab=31.78 E-value=16 Score=20.33 Aligned_cols=41 Identities=27% Similarity=0.385 Sum_probs=28.1
Q ss_pred CcccCCHHHHHHHHhh--CCHHHHHHHHHHHHhcc--CccHHHHH
Q 035416 2 KGLGTDDTTLVRVIVT--RTEIDMQYIKAEYSKKY--KKTLTDAV 42 (62)
Q Consensus 2 kg~gtde~~Li~il~~--rs~~~l~~i~~~Y~~~y--~~~L~~~i 42 (62)
-|.||.-..|+.++|. +++..++.+-..|++.. |.+-.-+|
T Consensus 22 pG~~TaFH~Lvqvi~kvgkd~~~Ld~~h~~F~~~L~eG~s~q~Al 66 (129)
T 3fke_A 22 PGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQASLAEGDSPQCAL 66 (129)
T ss_dssp SSSSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred CCCCchHHHHHHHHHHHccchhHHHHHHHHHHHHHhcCCCcchhH
Confidence 4788888888888765 77788887777776543 44443333
No 42
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=31.68 E-value=54 Score=19.45 Aligned_cols=25 Identities=20% Similarity=0.219 Sum_probs=20.4
Q ss_pred CHHHHHHHHHHHHhccCc--cHHHHHh
Q 035416 19 TEIDMQYIKAEYSKKYKK--TLTDAVH 43 (62)
Q Consensus 19 s~~~l~~i~~~Y~~~y~~--~L~~~i~ 43 (62)
++.++..++++|+..|.. ++.+.++
T Consensus 203 ~~~~~~~l~~~~~~~~~~~~~~~~~~~ 229 (259)
T 3hsq_A 203 SPEVRNAIKHAYKVIYHSGISTRKALD 229 (259)
T ss_dssp CHHHHHHHHHHHHHHHSSSSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 789999999999999854 4776664
No 43
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=31.67 E-value=10 Score=24.07 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHh
Q 035416 19 TEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSL 57 (62)
Q Consensus 19 s~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l 57 (62)
++.++.++.+.+.+.|..=+.=.|.+.+||.|+.+..+.
T Consensus 99 s~~~~~~~fe~l~~~~~~Ii~I~iSS~LSGTy~sA~~Aa 137 (315)
T 3fys_A 99 PIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAAD 137 (315)
T ss_dssp CHHHHHHHHHHHTTTCSEEEEEESCTTTCSHHHHHHHGG
T ss_pred CHHHHHHHHHHHHhcCCcEEEEeCCCcHhHHHHHHHHHH
Confidence 556666666666666666666677899999999987653
No 44
>2dt8_A DEGV family protein; fatty acid binding, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: PLM; 1.48A {Thermus thermophilus}
Probab=31.02 E-value=12 Score=23.11 Aligned_cols=39 Identities=15% Similarity=0.148 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHh
Q 035416 19 TEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSL 57 (62)
Q Consensus 19 s~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l 57 (62)
|+.++.++.+.+.+.|..=+.=.|.+.+||.|+.+..+.
T Consensus 65 s~~~~~~~f~~l~~~~~~ii~i~lSs~LSGTy~sA~~aa 103 (280)
T 2dt8_A 65 SPEDFARVYREALEEADHVLSLHISGKLSGTVQSAELAA 103 (280)
T ss_dssp CHHHHHHHHHHHTTSCSEEEEEESCTTTCTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCeEEEEECCCcHhHHHHHHHHHH
Confidence 455666665555455544455567889999999987764
No 45
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=29.72 E-value=15 Score=22.86 Aligned_cols=39 Identities=8% Similarity=0.042 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHh
Q 035416 19 TEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSL 57 (62)
Q Consensus 19 s~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l 57 (62)
|+.++..+.+.+.+.+..=+.=.|.+.+||.|+.+..+.
T Consensus 69 s~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa 107 (297)
T 3nyi_A 69 SVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAK 107 (297)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEESCTTTCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCeEEEEECCCcHhHHHHHHHHHH
Confidence 556666666666555544455567899999999987764
No 46
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=29.67 E-value=59 Score=19.61 Aligned_cols=25 Identities=20% Similarity=0.348 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHhccCc--cHHHHHh
Q 035416 19 TEIDMQYIKAEYSKKYKK--TLTDAVH 43 (62)
Q Consensus 19 s~~~l~~i~~~Y~~~y~~--~L~~~i~ 43 (62)
++.++..++++|+..|.. +|.+.++
T Consensus 225 ~~~~~~~l~~~~~~~~~~~~~~~~~~~ 251 (283)
T 4eqy_A 225 SPDAISALRSAYRILYKNSLSLEEAKV 251 (283)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 788999999999999864 4666654
No 47
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=28.73 E-value=18 Score=22.97 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHh
Q 035416 19 TEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSL 57 (62)
Q Consensus 19 s~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l 57 (62)
++.++.++.+.+.+.+..-+.=.|.+.+||.|+.+.++.
T Consensus 100 s~~~~~~~f~~l~~~g~~Ii~I~iSS~LSGTy~sA~~Aa 138 (320)
T 3pl5_A 100 NVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMAR 138 (320)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTTCTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCeEEEEecCchHhHHHHHHHHHH
Confidence 566776666666666654555566799999999987653
No 48
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=28.42 E-value=47 Score=14.77 Aligned_cols=29 Identities=14% Similarity=0.212 Sum_probs=24.8
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHhccCcc
Q 035416 9 TTLVRVIVTRTEIDMQYIKAEYSKKYKKT 37 (62)
Q Consensus 9 ~~Li~il~~rs~~~l~~i~~~Y~~~y~~~ 37 (62)
+.|++-+.+-+=-++..+-+..++.||.+
T Consensus 4 ~~iie~i~~lTvlE~~eLvk~leekfGVs 32 (40)
T 1dd4_C 4 DEIIEAIEKLTVSELAELVKKLEDKFGVT 32 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHCCC
Confidence 56778888888889999999999999976
No 49
>4afi_A AP-3 complex subunit delta-1, vesicle-associated protein 7; endocytosis, exocytosis, clathrin adaptor, chimera, fusion P; 2.80A {Homo sapiens}
Probab=27.92 E-value=27 Score=20.23 Aligned_cols=37 Identities=11% Similarity=0.208 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHh
Q 035416 21 IDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSL 57 (62)
Q Consensus 21 ~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l 57 (62)
.-|..|++.|...||.....+..-....+|...|-.+
T Consensus 130 ~FLedI~~eF~~~yg~~~~ta~pya~~~eF~~~L~~~ 166 (173)
T 4afi_A 130 SFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQ 166 (173)
T ss_dssp HHHHHHHHHHHHHHGGGGGTCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhchhhhhccCcchhHHHHHHHHHH
Confidence 4578899999999986433222223335666665443
No 50
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.28 E-value=13 Score=18.26 Aligned_cols=22 Identities=9% Similarity=0.155 Sum_probs=13.4
Q ss_pred HHHHhhCCHHHHHHHHHHHHhc
Q 035416 12 VRVIVTRTEIDMQYIKAEYSKK 33 (62)
Q Consensus 12 i~il~~rs~~~l~~i~~~Y~~~ 33 (62)
-+||.-...+....|+++|+++
T Consensus 10 y~iLgv~~~as~~eIk~ayr~l 31 (78)
T 2ctp_A 10 YEILGVSRGASDEDLKKAYRRL 31 (78)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHH
T ss_pred HHHcCCCCCCCHHHHHHHHHHH
Confidence 4455544445667778888755
No 51
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=26.20 E-value=45 Score=13.87 Aligned_cols=28 Identities=11% Similarity=0.165 Sum_probs=21.1
Q ss_pred HHHHHHHHhhCCHHHHHHHHHHHHhccC
Q 035416 8 DTTLVRVIVTRTEIDMQYIKAEYSKKYK 35 (62)
Q Consensus 8 e~~Li~il~~rs~~~l~~i~~~Y~~~y~ 35 (62)
.+.+++-+.+-+=-++..+-.+.++.||
T Consensus 3 ~~~iie~i~~lTvlEl~eLvk~lEe~fG 30 (30)
T 1zav_U 3 IDEIIEAIEKLTVSELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHSBHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHhC
Confidence 3567777777777888888888877776
No 52
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=26.17 E-value=1.3e+02 Score=19.09 Aligned_cols=49 Identities=14% Similarity=0.209 Sum_probs=38.5
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhc--------ccHHHHHHHHHhc
Q 035416 10 TLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSE--------TSGNYRAFLLSLL 58 (62)
Q Consensus 10 ~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~--------~sG~~~~~ll~l~ 58 (62)
.+.+.|..+++.-+..+++..++....++.+.+..+ .+.||+..+-+.+
T Consensus 264 ~~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGv~Afl 320 (363)
T 3bpt_A 264 EQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVL 320 (363)
T ss_dssp HHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSSHHHHHHHHHT
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCccHHhhhhhee
Confidence 356778889999999999999988888888877544 3578888877765
No 53
>3oao_A Uncharacterized protein from DUF2059 family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.72A {Pseudomonas aeruginosa} PDB: 2x3o_A
Probab=25.45 E-value=66 Score=18.23 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=23.6
Q ss_pred HHHHHHhhC-CHHHHHHHHHHHHhccCccHHHHH
Q 035416 10 TLVRVIVTR-TEIDMQYIKAEYSKKYKKTLTDAV 42 (62)
Q Consensus 10 ~Li~il~~r-s~~~l~~i~~~Y~~~y~~~L~~~i 42 (62)
.++.|-..+ +..++..+...|+.-.|+.+.+..
T Consensus 71 ~~~~iY~~~fT~~El~~l~~FY~sp~Gkk~~~~~ 104 (147)
T 3oao_A 71 ELIKLYTTNFTESELKDLNAFYQSPLGKKVLEKM 104 (147)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHh
Confidence 344554443 788999999999888888776643
No 54
>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B*
Probab=25.39 E-value=45 Score=22.07 Aligned_cols=37 Identities=14% Similarity=0.257 Sum_probs=28.6
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHhccCccHHH--HHhhcc
Q 035416 10 TLVRVIVTRTEIDMQYIKAEYSKKYKKTLTD--AVHSET 46 (62)
Q Consensus 10 ~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~--~i~~~~ 46 (62)
.|++.+-|.++.++..++..+.+.||+-+.. .|+...
T Consensus 133 ~Ll~lfdSeDprER~~LktiLhrIY~kf~~~R~~Irk~i 171 (403)
T 3fga_B 133 QLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQI 171 (403)
T ss_dssp HHHHGGGCSCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 3567777789999999999999999988753 344433
No 55
>4aj5_1 SKA3, spindle and kinetochore-associated protein 3; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=24.80 E-value=45 Score=18.03 Aligned_cols=20 Identities=15% Similarity=0.496 Sum_probs=15.1
Q ss_pred HHHHhhCCHHHHHHHHHHHH
Q 035416 12 VRVIVTRTEIDMQYIKAEYS 31 (62)
Q Consensus 12 i~il~~rs~~~l~~i~~~Y~ 31 (62)
..+|..|+..++..|+..|+
T Consensus 79 ~kvL~~rns~DI~~ire~fq 98 (101)
T 4aj5_1 79 TKVLMEKNSMDIMKIREYFQ 98 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHH
Confidence 46777788888888887664
No 56
>3osj_A Phycobilisome LCM core-membrane linker polypeptid; structural genomics, PSI-biology; 2.30A {Synechocystis SP} PDB: 2l06_A
Probab=24.35 E-value=14 Score=21.34 Aligned_cols=20 Identities=20% Similarity=0.561 Sum_probs=13.8
Q ss_pred CHHHHH-HHHHHHHhccCccH
Q 035416 19 TEIDMQ-YIKAEYSKKYKKTL 38 (62)
Q Consensus 19 s~~~l~-~i~~~Y~~~y~~~L 38 (62)
|..+++ .|+.+|++-||++.
T Consensus 21 s~~e~~~vI~AaYRQVf~~~~ 41 (147)
T 3osj_A 21 SALEKNAVIKAAYRQIFERDI 41 (147)
T ss_dssp CHHHHHHHHHHHHHHHHSSCC
T ss_pred CHHHHHHHHHHHHHHHhcCcc
Confidence 444544 46779999999743
No 57
>1r4t_A Exoenzyme S; EXOS, GAP, toxin, virulence factor, signal transduction; NMR {Pseudomonas aeruginosa}
Probab=23.88 E-value=67 Score=18.55 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=32.1
Q ss_pred cccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCc--cHHHHHhhcccH
Q 035416 3 GLGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKK--TLTDAVHSETSG 48 (62)
Q Consensus 3 g~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~--~L~~~i~~~~sG 48 (62)
=|||-.-...+.+.+-|+.++..+...-+...++ .|...++++..|
T Consensus 91 QWGT~GG~~~~~v~~AS~e~L~ea~~~lh~vm~eva~l~~ave~evag 138 (153)
T 1r4t_A 91 QWGTTGGAASQLVLDASPELRREITDQLHQVMSEVALLRQAVESEVSR 138 (153)
T ss_dssp GTTSSSSHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccccHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3777777888888889999998888766655543 344555555554
No 58
>1u14_A Hypothetical UPF0244 protein YJJX; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; 1.68A {Salmonella typhimurium} SCOP: c.51.4.3 PDB: 1u5w_A
Probab=23.55 E-value=28 Score=20.34 Aligned_cols=22 Identities=14% Similarity=0.223 Sum_probs=18.7
Q ss_pred HhhCCHHHHHHHHHHHHhccCc
Q 035416 15 IVTRTEIDMQYIKAEYSKKYKK 36 (62)
Q Consensus 15 l~~rs~~~l~~i~~~Y~~~y~~ 36 (62)
+.|++|.-+.+++++|++.|+.
T Consensus 7 VgS~Np~Ki~Av~~af~~~f~~ 28 (172)
T 1u14_A 7 SATTNPAKIQAILQAFEEIFGE 28 (172)
T ss_dssp ESCCCHHHHHHHHHHHHHHHCT
T ss_pred EeCCCHHHHHHHHHHHHHhcCC
Confidence 4578999999999999988863
No 59
>3k6g_A Telomeric repeat-binding factor 2-interacting Pro; helix, chromosomal protein, nucleus, phosphoprotein, telomer cycle, DNA-binding, protein binding; 1.95A {Homo sapiens}
Probab=23.54 E-value=78 Score=17.26 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=20.9
Q ss_pred HHHhccCccHHHHHh--hcccHHHHHHHHHhcC
Q 035416 29 EYSKKYKKTLTDAVH--SETSGNYRAFLLSLLG 59 (62)
Q Consensus 29 ~Y~~~y~~~L~~~i~--~~~sG~~~~~ll~l~~ 59 (62)
..-+.|+.+|...-+ -++||+|..+..-|..
T Consensus 19 ~lMeef~~DL~sVTqAlLK~SGel~at~~fL~~ 51 (111)
T 3k6g_A 19 QLMEKFNLDLSTVTQAFLKNSGELEATSAFLAS 51 (111)
T ss_dssp HHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHccccHHHHHHHHhC
Confidence 345567778876554 3789999987666553
No 60
>2lwd_A Probable ATP-dependent RNA helicase DDX58; RIG-I, CARD, sensor, viral RNA, signaling protein; NMR {Homo sapiens} PDB: 2lwe_A
Probab=23.39 E-value=48 Score=17.55 Aligned_cols=43 Identities=16% Similarity=0.151 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHhcc----CccHHHHH-hhcccHHHHHHHHHhcCCC
Q 035416 19 TEIDMQYIKAEYSKKY----KKTLTDAV-HSETSGNYRAFLLSLLGPK 61 (62)
Q Consensus 19 s~~~l~~i~~~Y~~~y----~~~L~~~i-~~~~sG~~~~~ll~l~~~~ 61 (62)
++.+...|.+...+.= =..|.+.+ +.+..|.|+.++.||-.++
T Consensus 42 ~~~d~E~I~a~~~~~G~~~aa~~LL~~L~r~~~~gWf~~fl~AL~~~g 89 (100)
T 2lwd_A 42 INQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKER 89 (100)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCTHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHccChHHHHHHHHHHHHhcCcCCcHHHHHHHHHHcC
Confidence 5667777776655321 12344444 5567899999999986443
No 61
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=23.31 E-value=24 Score=21.83 Aligned_cols=39 Identities=23% Similarity=0.308 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHHHh
Q 035416 19 TEIDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLLSL 57 (62)
Q Consensus 19 s~~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll~l 57 (62)
|+.++..+.+.+.+.+..=+.=.|.+.+||.|+.+..+.
T Consensus 66 s~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa 104 (289)
T 1pzx_A 66 SPLAMKELFLPYAKENRPCLYIAFSSKLSGTYQTAMAVR 104 (289)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTTCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCeEEEEECCCchhHHHHHHHHHH
Confidence 555666655555444334444466789999999987753
No 62
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=22.99 E-value=1.1e+02 Score=18.02 Aligned_cols=36 Identities=14% Similarity=0.090 Sum_probs=29.0
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHhccCccHHHHHhhc
Q 035416 10 TLVRVIVTRTEIDMQYIKAEYSKKYKKTLTDAVHSE 45 (62)
Q Consensus 10 ~Li~il~~rs~~~l~~i~~~Y~~~y~~~L~~~i~~~ 45 (62)
.+.+-+...++.-+..+|+...+....+|.+.+..|
T Consensus 192 ~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~E 227 (232)
T 3ot6_A 192 AVAAQLKKINMNAHKKTKLKVRKGLLDTLDAAIEQD 227 (232)
T ss_dssp HHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhHhHHHHHHHHH
Confidence 355667788999999999999888888888877654
No 63
>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding protein, lipid binding protein, PSI, structural genomics; HET: MSE HXA; 2.05A {Streptococcus pyogenes}
Probab=22.06 E-value=26 Score=21.62 Aligned_cols=38 Identities=13% Similarity=-0.045 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhc-cCccHHHHHhhcccHHHHHHHHH
Q 035416 19 TEIDMQYIKAEYSKK-YKKTLTDAVHSETSGNYRAFLLS 56 (62)
Q Consensus 19 s~~~l~~i~~~Y~~~-y~~~L~~~i~~~~sG~~~~~ll~ 56 (62)
|+.++.++.+.+.+. |..=+.=.|.+.+||.|+.+..+
T Consensus 69 s~~~~~~~f~~l~~~gy~~ii~i~iSs~LSGTy~sA~~a 107 (282)
T 2g7z_A 69 PVGLFAETYENLVKKGVTDIVAIHLSPALSGTIEASRQG 107 (282)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECCTTTCTHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEECCCcHhHHHHHHHHH
Confidence 556666665555444 45556667789999999998765
No 64
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.04 E-value=17 Score=17.76 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=12.9
Q ss_pred HHHHhhCCHHHHHHHHHHHHhc
Q 035416 12 VRVIVTRTEIDMQYIKAEYSKK 33 (62)
Q Consensus 12 i~il~~rs~~~l~~i~~~Y~~~ 33 (62)
-+||.-........|+++|+++
T Consensus 10 y~iLgv~~~a~~~~Ik~ayr~l 31 (79)
T 2dn9_A 10 YQILGVPRNASQKEIKKAYYQL 31 (79)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHH
T ss_pred HHHcCCCCCCCHHHHHHHHHHH
Confidence 3444444445666777777654
No 65
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.01 E-value=28 Score=17.47 Aligned_cols=22 Identities=14% Similarity=0.167 Sum_probs=12.7
Q ss_pred HHHHhhCCHHHHHHHHHHHHhc
Q 035416 12 VRVIVTRTEIDMQYIKAEYSKK 33 (62)
Q Consensus 12 i~il~~rs~~~l~~i~~~Y~~~ 33 (62)
-+||.-...+....|+++|+++
T Consensus 10 y~iLgv~~~as~~eIk~ayr~l 31 (88)
T 2ctr_A 10 YDILGVPKSASERQIKKAFHKL 31 (88)
T ss_dssp HHHHTCCTTCCHHHHHHHHHHH
T ss_pred HHHcCcCCCCCHHHHHHHHHHH
Confidence 3455444445666777777654
No 66
>1zwy_A Hypothetical UPF0244 protein VC0702; hypothetical protein, structural genomics, PSI, protein STRU initiative; 1.90A {Vibrio cholerae} SCOP: c.51.4.3 PDB: 1zno_A
Probab=21.58 E-value=34 Score=20.18 Aligned_cols=21 Identities=10% Similarity=0.382 Sum_probs=18.4
Q ss_pred HhhCCHHHHHHHHHHHHhccC
Q 035416 15 IVTRTEIDMQYIKAEYSKKYK 35 (62)
Q Consensus 15 l~~rs~~~l~~i~~~Y~~~y~ 35 (62)
+.|++|.-+.+++++|++.|+
T Consensus 17 VgS~NPvKi~Av~~Af~~~f~ 37 (185)
T 1zwy_A 17 IASQNPAKVNAVRSAFSTVFP 37 (185)
T ss_dssp ESCCCHHHHHHHHHHHHHHCT
T ss_pred EeCCCHHHHHHHHHHHHHhcC
Confidence 456899999999999998886
No 67
>3kj0_B BCL-2-like protein 11; BH3, apoptosis, protein-peptide complex, alternative splicing, cytoplasm, developmental protein, differentiation; 1.70A {Homo sapiens} PDB: 2pqk_B
Probab=21.24 E-value=57 Score=13.23 Aligned_cols=16 Identities=19% Similarity=0.426 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHhccC
Q 035416 20 EIDMQYIKAEYSKKYK 35 (62)
Q Consensus 20 ~~~l~~i~~~Y~~~y~ 35 (62)
..++..|-+.|.+.|-
T Consensus 11 AqELRRIGDeFN~~y~ 26 (27)
T 3kj0_B 11 AQELRRIGDEFNAYYA 26 (27)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhcc
Confidence 3678888888877764
No 68
>2ky4_A Phycobilisome linker polypeptide; NESG, PSI, structural genomics, protein structure initiative northeast structural genomics consortium; NMR {Nostoc SP}
Probab=21.07 E-value=68 Score=18.42 Aligned_cols=20 Identities=15% Similarity=0.491 Sum_probs=14.2
Q ss_pred CHHHHH-HHHHHHHhccCccH
Q 035416 19 TEIDMQ-YIKAEYSKKYKKTL 38 (62)
Q Consensus 19 s~~~l~-~i~~~Y~~~y~~~L 38 (62)
+..+++ .|+.+|++-||.++
T Consensus 12 ~~~~~~~vI~AaYRQVf~~~~ 32 (149)
T 2ky4_A 12 DKAAIKTLISAAYRQIFERDI 32 (149)
T ss_dssp CHHHHHHHHHHHHHHHTCSCC
T ss_pred CHHHHHHHHHHHHHHHhcCcc
Confidence 344444 57789999999875
No 69
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=20.96 E-value=31 Score=16.74 Aligned_cols=14 Identities=21% Similarity=0.318 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHhc
Q 035416 20 EIDMQYIKAEYSKK 33 (62)
Q Consensus 20 ~~~l~~i~~~Y~~~ 33 (62)
.+....|+++|+++
T Consensus 14 ~as~~~Ik~ayr~l 27 (77)
T 1hdj_A 14 GASDEEIKRAYRRQ 27 (77)
T ss_dssp TCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 34555666677544
No 70
>2vx8_A Nucleoporin-like protein RIP, vesicle-associated membrane protein 7; endocytosis,exocytosis, endocytosis, exocytosis, acetylation, coiled coil; 2.2A {Homo sapiens} PDB: 2dmw_A
Probab=20.82 E-value=41 Score=19.37 Aligned_cols=18 Identities=11% Similarity=0.218 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhccCccH
Q 035416 21 IDMQYIKAEYSKKYKKTL 38 (62)
Q Consensus 21 ~~l~~i~~~Y~~~y~~~L 38 (62)
.-|..|++.|.+.|+...
T Consensus 120 ~fLedI~~eF~~~y~~~~ 137 (169)
T 2vx8_A 120 SFLNEVKKRFQTTYGSRA 137 (169)
T ss_dssp HHHHHHHHHHHHHHTTGG
T ss_pred HHHHHHHHHHHHHhhhhh
Confidence 467899999999998643
No 71
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=20.79 E-value=40 Score=16.68 Aligned_cols=24 Identities=13% Similarity=0.306 Sum_probs=15.4
Q ss_pred HHHHHHhhCCH--HHHHHHHHHHHhc
Q 035416 10 TLVRVIVTRTE--IDMQYIKAEYSKK 33 (62)
Q Consensus 10 ~Li~il~~rs~--~~l~~i~~~Y~~~ 33 (62)
...+||.-... .....|+.+|+++
T Consensus 12 ~~y~iLgl~~~~~a~~~eIk~aYr~l 37 (79)
T 1faf_A 12 RLLELLKLPRQLWGDFGRMQQAYKQQ 37 (79)
T ss_dssp HHHHHHTCCSSSTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 34566665444 5677888888754
No 72
>2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural GENO PSI-2, protein structure initiative; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1
Probab=20.66 E-value=57 Score=18.68 Aligned_cols=26 Identities=15% Similarity=0.259 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhccCccHHHHHhhcc
Q 035416 21 IDMQYIKAEYSKKYKKTLTDAVHSET 46 (62)
Q Consensus 21 ~~l~~i~~~Y~~~y~~~L~~~i~~~~ 46 (62)
..+..+..+|+++||-...-.++...
T Consensus 98 ~~l~~lN~~Ye~kFGfpFvi~v~g~~ 123 (165)
T 2o8i_A 98 ARFTQLNSAYTEKFGFPFIIAVKGLN 123 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCCCCCTTCC
T ss_pred HHHHHHHHHHHHHcCCeeEeeeCCCC
Confidence 46888889999999987665555433
No 73
>4b93_A Vesicle-associated membrane protein 7; endocytosis, exocytosis, snare; 2.00A {Mus musculus} PDB: 2dmw_A
Probab=20.52 E-value=46 Score=19.28 Aligned_cols=35 Identities=11% Similarity=0.225 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhccCccHHHHHhhcccHHHHHHHH
Q 035416 21 IDMQYIKAEYSKKYKKTLTDAVHSETSGNYRAFLL 55 (62)
Q Consensus 21 ~~l~~i~~~Y~~~y~~~L~~~i~~~~sG~~~~~ll 55 (62)
.-|..|++.|...||..............|...|-
T Consensus 78 ~fL~~i~~eF~~~~~~~~~~~~~~~~~~~f~~~l~ 112 (189)
T 4b93_A 78 SFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLA 112 (189)
T ss_dssp HHHHHHHHHHHHHHGGGGGTCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccccCCccccchhhHHHH
Confidence 45778899999888876443332233344555443
No 74
>1he1_A Exoenzyme S, EXOS; signaling protein, signalling complex, EXOS, RAC, pseudomonas aeruginosa, GAP, virulence factor; HET: GDP; 2.0A {Pseudomonas aeruginosa} SCOP: a.24.11.1 PDB: 1he9_A
Probab=20.04 E-value=83 Score=17.79 Aligned_cols=33 Identities=9% Similarity=0.113 Sum_probs=24.7
Q ss_pred ccCCHHHHHHHHhhCCHHHHHHHHHHHHhccCc
Q 035416 4 LGTDDTTLVRVIVTRTEIDMQYIKAEYSKKYKK 36 (62)
Q Consensus 4 ~gtde~~Li~il~~rs~~~l~~i~~~Y~~~y~~ 36 (62)
|||-.-...+.+.+-|+.++.++...-+...++
T Consensus 90 WGT~GG~~~~~v~~As~e~L~ea~~~lh~vm~e 122 (135)
T 1he1_A 90 WGTTGGAASQLVLDASPELRREITDQLHQVMSE 122 (135)
T ss_dssp HTCSSSHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred hhccccHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 567666777888888999998888776655543
Done!