BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035417
         (61 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9SAR5|AKR2_ARATH Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana
           GN=AKR2 PE=1 SV=2
          Length = 342

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/33 (72%), Positives = 31/33 (93%)

Query: 1   MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKL 33
           +L+NG+AVTLQN+D KTPIDVAKLNSQ +++KL
Sbjct: 303 LLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKL 335


>sp|Q4R690|ZDH13_MACFA Palmitoyltransferase ZDHHC13 OS=Macaca fascicularis GN=ZDHHC13 PE=2
           SV=1
          Length = 622

 Score = 33.9 bits (76), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 1   MLKNGSAVTLQNMDRKTPIDVAKLNSQH---DMLKLPATLHVNDGFR 44
           +L+ GS++ +QN+  +TP+D+A  N       MLK  A +  N  FR
Sbjct: 236 LLEAGSSLDIQNVKGETPLDMALQNKNQLIIHMLKTEAKMRTNQKFR 282


>sp|Q5NVB9|ZDH13_PONAB Palmitoyltransferase ZDHHC13 OS=Pongo abelii GN=ZDHHC13 PE=2 SV=1
          Length = 622

 Score = 33.5 bits (75), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 1   MLKNGSAVTLQNMDRKTPIDVAKLNSQH---DMLKLPATLHVNDGFR 44
           +L+ GS++ +QN+  +TP+D+A  N       MLK  A +  N  FR
Sbjct: 236 LLEAGSSLDIQNVKGETPLDMALQNKNQLIIHMLKTEAKMRANQKFR 282


>sp|Q8IUH4|ZDH13_HUMAN Palmitoyltransferase ZDHHC13 OS=Homo sapiens GN=ZDHHC13 PE=2 SV=3
          Length = 622

 Score = 33.5 bits (75), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 1   MLKNGSAVTLQNMDRKTPIDVAKLNSQH---DMLKLPATLHVNDGFR 44
           +L+ GS++ +QN+  +TP+D+A  N       MLK  A +  N  FR
Sbjct: 236 LLEAGSSLDIQNVKGETPLDMALQNKNQLIIHMLKTEAKMRANQKFR 282


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.133    0.389 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,874,386
Number of Sequences: 539616
Number of extensions: 648516
Number of successful extensions: 1423
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1420
Number of HSP's gapped (non-prelim): 7
length of query: 61
length of database: 191,569,459
effective HSP length: 34
effective length of query: 27
effective length of database: 173,222,515
effective search space: 4677007905
effective search space used: 4677007905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)