Query 035417
Match_columns 61
No_of_seqs 145 out of 1131
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 02:51:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035417.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035417hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13857 Ank_5: Ankyrin repeat 99.6 1.9E-15 4.1E-20 73.1 3.5 51 1-51 1-52 (56)
2 PF13606 Ank_3: Ankyrin repeat 99.3 6.3E-12 1.4E-16 54.1 3.9 29 14-42 1-29 (30)
3 PF12796 Ank_2: Ankyrin repeat 99.3 3.1E-12 6.7E-17 65.8 3.5 45 1-45 45-89 (89)
4 PF00023 Ank: Ankyrin repeat H 99.3 1.1E-11 2.3E-16 54.1 4.1 32 14-45 1-32 (33)
5 PHA02946 ankyin-like protein; 99.2 3.1E-11 6.8E-16 77.6 4.4 48 1-48 58-105 (446)
6 PF13637 Ank_4: Ankyrin repeat 99.2 2.7E-11 5.8E-16 57.8 2.8 35 1-35 20-54 (54)
7 KOG0509 Ankyrin repeat and DHH 99.2 2.4E-11 5.1E-16 80.3 2.9 58 1-58 97-159 (600)
8 PHA02795 ankyrin-like protein; 99.1 9.1E-11 2E-15 75.7 4.4 56 1-56 207-266 (437)
9 KOG4412 26S proteasome regulat 99.1 9.1E-11 2E-15 68.9 3.4 49 1-49 125-173 (226)
10 KOG4177 Ankyrin [Cell wall/mem 99.1 2.2E-10 4.7E-15 80.0 4.5 45 1-45 559-603 (1143)
11 PHA02791 ankyrin-like protein; 99.0 3.3E-10 7.1E-15 69.7 4.4 56 1-56 80-140 (284)
12 PHA03095 ankyrin-like protein; 99.0 3.8E-10 8.2E-15 71.7 4.3 48 1-48 243-290 (471)
13 PHA02736 Viral ankyrin protein 99.0 7.3E-10 1.6E-14 62.0 4.2 48 1-48 77-126 (154)
14 PHA02989 ankyrin repeat protei 99.0 5.7E-10 1.2E-14 72.0 4.1 47 2-48 243-289 (494)
15 PHA03100 ankyrin repeat protei 99.0 7.8E-10 1.7E-14 70.5 4.4 48 1-48 236-283 (480)
16 PHA02876 ankyrin repeat protei 99.0 8.2E-10 1.8E-14 73.5 4.6 45 1-45 164-208 (682)
17 PHA02741 hypothetical protein; 99.0 1E-09 2.2E-14 62.5 4.3 46 1-46 83-130 (169)
18 PHA02743 Viral ankyrin protein 99.0 1.1E-09 2.4E-14 62.4 4.2 45 1-45 79-125 (166)
19 PHA02791 ankyrin-like protein; 99.0 9.9E-10 2.1E-14 67.6 4.1 46 1-46 179-225 (284)
20 PHA02859 ankyrin repeat protei 99.0 1.2E-09 2.6E-14 64.2 4.3 46 1-46 109-156 (209)
21 PHA02884 ankyrin repeat protei 99.0 1.2E-09 2.6E-14 67.7 4.5 44 1-44 52-99 (300)
22 KOG0514 Ankyrin repeat protein 98.9 6.7E-10 1.5E-14 70.6 3.2 45 1-45 359-404 (452)
23 KOG4412 26S proteasome regulat 98.9 6.4E-10 1.4E-14 65.4 2.7 41 5-45 96-136 (226)
24 PHA02716 CPXV016; CPX019; EVM0 98.9 1.3E-09 2.7E-14 74.2 4.4 50 1-50 198-249 (764)
25 PHA02798 ankyrin-like protein; 98.9 1.2E-09 2.5E-14 70.5 4.1 47 1-47 95-144 (489)
26 PTZ00322 6-phosphofructo-2-kin 98.9 1.4E-09 3.1E-14 72.8 4.4 47 1-47 101-147 (664)
27 PHA02859 ankyrin repeat protei 98.9 1.8E-09 3.9E-14 63.5 4.4 46 1-46 72-121 (209)
28 PLN03192 Voltage-dependent pot 98.9 1.4E-09 2.9E-14 74.1 4.3 48 1-48 544-591 (823)
29 PHA02798 ankyrin-like protein; 98.9 1.1E-09 2.5E-14 70.6 3.8 46 3-48 246-291 (489)
30 PHA02875 ankyrin repeat protei 98.9 1.8E-09 3.8E-14 68.0 4.4 43 2-44 155-197 (413)
31 KOG4214 Myotrophin and similar 98.9 1.2E-09 2.7E-14 58.5 3.1 44 1-44 53-96 (117)
32 PLN03192 Voltage-dependent pot 98.9 1.7E-09 3.7E-14 73.6 4.3 48 1-48 641-688 (823)
33 PHA02884 ankyrin repeat protei 98.9 2.2E-09 4.8E-14 66.6 4.4 48 1-48 89-137 (300)
34 PHA02875 ankyrin repeat protei 98.9 2.6E-09 5.6E-14 67.3 4.5 47 1-47 121-167 (413)
35 PHA02878 ankyrin repeat protei 98.9 2.5E-09 5.3E-14 68.7 4.3 43 2-44 154-197 (477)
36 PHA03095 ankyrin-like protein; 98.9 2.7E-09 5.8E-14 67.8 4.4 46 1-46 69-115 (471)
37 PHA02730 ankyrin-like protein; 98.9 2.2E-09 4.8E-14 72.2 4.0 46 1-46 448-493 (672)
38 PHA02730 ankyrin-like protein; 98.9 1.4E-09 3.1E-14 73.1 3.1 40 1-40 63-104 (672)
39 PHA02878 ankyrin repeat protei 98.9 3.1E-09 6.6E-14 68.3 4.4 46 1-46 187-232 (477)
40 PHA02876 ankyrin repeat protei 98.9 2.9E-09 6.3E-14 70.9 4.3 51 1-51 428-479 (682)
41 KOG0512 Fetal globin-inducing 98.9 1.3E-09 2.9E-14 63.9 2.1 44 1-44 116-159 (228)
42 PHA02917 ankyrin-like protein; 98.8 4E-09 8.7E-14 70.8 4.4 47 1-47 438-484 (661)
43 PF12796 Ank_2: Ankyrin repeat 98.8 5.9E-09 1.3E-13 53.4 4.1 50 2-55 17-70 (89)
44 PHA02792 ankyrin-like protein; 98.8 3.5E-09 7.6E-14 70.8 4.0 48 1-48 396-443 (631)
45 PHA02874 ankyrin repeat protei 98.8 6E-09 1.3E-13 66.2 4.4 41 2-42 144-184 (434)
46 PHA02989 ankyrin repeat protei 98.8 6.3E-09 1.4E-13 67.2 4.1 45 1-45 94-142 (494)
47 PHA02946 ankyin-like protein; 98.8 8E-09 1.7E-13 66.6 4.1 46 1-47 194-241 (446)
48 PHA02874 ankyrin repeat protei 98.8 1E-08 2.2E-13 65.2 4.5 46 1-46 110-155 (434)
49 PHA02736 Viral ankyrin protein 98.8 1.5E-08 3.2E-13 56.7 4.3 42 1-42 111-153 (154)
50 KOG0502 Integral membrane anky 98.8 3.7E-09 8.1E-14 63.9 2.0 51 5-55 150-200 (296)
51 PHA02716 CPXV016; CPX019; EVM0 98.7 1.2E-08 2.7E-13 69.5 3.9 44 1-44 521-569 (764)
52 PHA02743 Viral ankyrin protein 98.7 2.5E-08 5.4E-13 56.8 4.6 44 3-46 116-159 (166)
53 KOG0195 Integrin-linked kinase 98.7 3.7E-09 8E-14 66.1 0.9 53 1-53 86-138 (448)
54 PHA02795 ankyrin-like protein; 98.7 1.9E-08 4.1E-13 65.1 3.9 44 1-44 240-291 (437)
55 KOG0509 Ankyrin repeat and DHH 98.7 1.5E-08 3.2E-13 67.3 3.4 47 1-47 131-177 (600)
56 PF13637 Ank_4: Ankyrin repeat 98.7 4.1E-08 8.9E-13 46.6 3.6 33 15-47 1-33 (54)
57 PHA03100 ankyrin repeat protei 98.7 2.9E-08 6.3E-13 63.3 3.7 41 2-42 93-135 (480)
58 COG0666 Arp FOG: Ankyrin repea 98.7 4.4E-08 9.5E-13 55.5 4.1 53 1-53 130-185 (235)
59 PHA02917 ankyrin-like protein; 98.6 2.8E-08 6E-13 66.8 3.7 45 1-45 122-168 (661)
60 KOG0515 p53-interacting protei 98.6 1.9E-08 4.1E-13 66.6 2.4 38 2-39 603-640 (752)
61 KOG4177 Ankyrin [Cell wall/mem 98.6 2.7E-08 5.8E-13 69.9 2.6 46 1-46 526-571 (1143)
62 PHA02741 hypothetical protein; 98.6 7.5E-08 1.6E-12 54.8 4.0 52 4-55 49-109 (169)
63 KOG0502 Integral membrane anky 98.6 1.5E-08 3.2E-13 61.4 1.1 48 1-48 212-259 (296)
64 KOG0508 Ankyrin repeat protein 98.6 1.4E-08 3.1E-13 66.4 0.5 40 3-42 138-177 (615)
65 KOG0512 Fetal globin-inducing 98.6 1E-07 2.2E-12 56.0 3.9 50 7-56 89-138 (228)
66 KOG4214 Myotrophin and similar 98.5 4.8E-08 1E-12 52.4 2.1 48 5-53 25-72 (117)
67 PTZ00322 6-phosphofructo-2-kin 98.5 1.4E-07 3.1E-12 63.4 4.5 45 1-45 134-185 (664)
68 COG0666 Arp FOG: Ankyrin repea 98.5 3.5E-07 7.6E-12 51.7 4.3 39 1-39 92-135 (235)
69 KOG0505 Myosin phosphatase, re 98.4 1.3E-07 2.8E-12 62.1 1.7 45 1-45 217-261 (527)
70 KOG0508 Ankyrin repeat protein 98.4 3.2E-07 6.9E-12 60.3 3.5 54 1-54 103-156 (615)
71 PHA02792 ankyrin-like protein; 98.4 1.2E-07 2.5E-12 63.7 1.2 49 1-49 91-140 (631)
72 KOG0515 p53-interacting protei 98.4 4.6E-07 9.9E-12 60.3 3.7 46 7-52 575-620 (752)
73 KOG0505 Myosin phosphatase, re 98.3 2.7E-07 5.9E-12 60.6 1.8 44 1-44 92-135 (527)
74 KOG0195 Integrin-linked kinase 98.2 8.9E-07 1.9E-11 55.7 2.7 42 2-43 54-95 (448)
75 KOG0510 Ankyrin repeat protein 98.2 1.4E-06 3.1E-11 59.9 3.6 46 1-46 140-185 (929)
76 KOG0514 Ankyrin repeat protein 98.2 1.1E-06 2.4E-11 56.3 2.6 51 6-56 330-381 (452)
77 smart00248 ANK ankyrin repeats 98.2 6.4E-06 1.4E-10 32.5 3.9 28 14-41 1-28 (30)
78 KOG0510 Ankyrin repeat protein 98.2 1.8E-06 3.8E-11 59.4 3.1 45 1-45 360-407 (929)
79 KOG0511 Ankyrin repeat protein 98.2 2.4E-06 5.1E-11 55.1 3.4 41 1-41 55-95 (516)
80 KOG1710 MYND Zn-finger and ank 98.1 1.5E-06 3.2E-11 54.5 1.9 53 7-59 37-94 (396)
81 cd00204 ANK ankyrin repeats; 98.1 7.3E-06 1.6E-10 42.7 4.3 38 3-40 61-98 (126)
82 KOG2384 Major histocompatibili 98.1 5.1E-06 1.1E-10 49.3 3.4 41 5-45 2-43 (223)
83 TIGR00870 trp transient-recept 98.1 3.7E-06 7.9E-11 56.9 2.9 54 1-54 147-218 (743)
84 PF13857 Ank_5: Ankyrin repeat 98.0 1.3E-06 2.9E-11 41.8 0.6 22 1-22 35-56 (56)
85 KOG1710 MYND Zn-finger and ank 98.0 4.8E-06 1E-10 52.3 2.9 44 1-44 64-108 (396)
86 cd00204 ANK ankyrin repeats; 98.0 1.4E-05 3.1E-10 41.5 4.2 42 2-43 27-68 (126)
87 KOG0818 GTPase-activating prot 98.0 6.2E-06 1.3E-10 54.6 3.0 53 1-53 152-205 (669)
88 TIGR00870 trp transient-recept 97.9 7.8E-06 1.7E-10 55.3 2.9 51 2-52 37-90 (743)
89 KOG0783 Uncharacterized conser 97.9 8.8E-06 1.9E-10 56.7 2.5 45 1-45 71-116 (1267)
90 KOG3676 Ca2+-permeable cation 97.8 1.7E-05 3.7E-10 54.4 2.8 35 14-48 239-273 (782)
91 KOG0520 Uncharacterized conser 97.7 2.4E-05 5.2E-10 54.8 2.7 40 3-42 629-668 (975)
92 KOG0522 Ankyrin repeat protein 97.6 7.7E-05 1.7E-09 49.6 3.8 48 5-52 45-92 (560)
93 KOG0506 Glutaminase (contains 97.5 3.9E-05 8.4E-10 50.8 1.1 43 3-45 527-570 (622)
94 KOG0507 CASK-interacting adapt 97.5 8.5E-05 1.8E-09 51.2 2.4 45 1-45 101-145 (854)
95 KOG0705 GTPase-activating prot 97.4 0.00016 3.5E-09 48.8 3.1 40 3-42 682-721 (749)
96 KOG3676 Ca2+-permeable cation 97.3 0.00026 5.6E-09 48.9 2.9 45 1-45 259-305 (782)
97 KOG0521 Putative GTPase activa 97.2 0.00013 2.8E-09 50.5 1.0 45 1-45 675-719 (785)
98 KOG0705 GTPase-activating prot 97.0 0.0005 1.1E-08 46.6 2.5 52 1-52 643-698 (749)
99 KOG0522 Ankyrin repeat protein 96.9 0.0011 2.5E-08 44.2 3.0 37 1-37 74-110 (560)
100 KOG0818 GTPase-activating prot 96.9 0.0015 3.2E-08 43.8 3.4 36 1-36 186-221 (669)
101 KOG0507 CASK-interacting adapt 96.8 0.00042 9.1E-09 47.9 0.8 33 7-39 41-73 (854)
102 KOG4369 RTK signaling protein 96.4 0.0016 3.4E-08 47.5 1.3 41 1-41 776-816 (2131)
103 KOG0783 Uncharacterized conser 96.2 0.001 2.2E-08 46.9 -0.3 40 8-47 45-84 (1267)
104 KOG4369 RTK signaling protein 96.1 0.0032 6.9E-08 46.0 1.5 41 2-42 844-884 (2131)
105 KOG2505 Ankyrin repeat protein 95.5 0.023 4.9E-07 38.2 3.5 39 10-48 425-463 (591)
106 KOG0506 Glutaminase (contains 94.8 0.027 5.7E-07 37.9 2.5 35 4-38 562-596 (622)
107 KOG3609 Receptor-activated Ca2 94.7 0.046 1E-06 38.4 3.3 30 12-41 128-157 (822)
108 KOG0521 Putative GTPase activa 94.5 0.035 7.5E-07 38.9 2.6 43 4-46 643-687 (785)
109 KOG2384 Major histocompatibili 94.4 0.066 1.4E-06 32.2 3.3 39 1-39 31-70 (223)
110 KOG0782 Predicted diacylglycer 93.1 0.11 2.5E-06 35.9 3.0 35 5-39 889-923 (1004)
111 PF06128 Shigella_OspC: Shigel 91.3 0.33 7.2E-06 30.1 3.2 39 2-40 237-279 (284)
112 KOG0782 Predicted diacylglycer 90.0 0.23 4.9E-06 34.5 1.8 36 8-43 927-962 (1004)
113 KOG3609 Receptor-activated Ca2 87.7 0.19 4E-06 35.6 0.3 34 6-39 53-86 (822)
114 KOG0511 Ankyrin repeat protein 87.2 0.44 9.6E-06 31.5 1.7 42 18-59 39-84 (516)
115 KOG3836 HLH transcription fact 82.3 0.47 1E-05 32.6 0.3 38 1-38 415-452 (605)
116 KOG1709 Guanidinoacetate methy 77.7 4.4 9.6E-05 25.2 3.3 40 1-40 1-40 (271)
117 KOG2505 Ankyrin repeat protein 71.2 1.1 2.4E-05 30.5 -0.3 32 1-35 449-480 (591)
118 PF11929 DUF3447: Domain of un 69.9 6.5 0.00014 19.5 2.4 22 17-38 8-29 (76)
119 COG3970 Fumarylacetoacetate (F 46.5 4.8 0.0001 26.1 -0.6 23 5-27 218-240 (379)
120 PF03158 DUF249: Multigene fam 43.7 24 0.00052 21.2 2.1 24 19-42 147-170 (192)
121 COG0223 Fmt Methionyl-tRNA for 33.8 26 0.00057 22.4 1.2 23 12-34 114-136 (307)
122 PF09722 DUF2384: Protein of u 31.2 51 0.0011 15.0 1.8 23 12-34 24-47 (54)
123 PF12514 DUF3718: Protein of u 29.0 83 0.0018 15.5 2.6 23 12-34 32-54 (68)
124 KOG0498 K+-channel ERG and rel 28.8 13 0.00027 26.6 -0.8 42 4-45 598-639 (727)
125 PF10273 WGG: Pre-rRNA-process 21.8 69 0.0015 16.3 1.3 13 14-26 11-23 (82)
126 PF04964 Flp_Fap: Flp/Fap pili 21.2 70 0.0015 14.4 1.2 16 10-25 2-17 (46)
127 TIGR02293 TAS_TIGR02293 putati 21.1 94 0.002 17.1 1.9 23 12-34 101-124 (133)
No 1
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.58 E-value=1.9e-15 Score=73.14 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=29.0
Q ss_pred CccCC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccc
Q 035417 1 MLKNG-SAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFS 51 (61)
Q Consensus 1 Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 51 (61)
||++| ++++.+|..|.||||+|+.+|+.+++++|++.|++.+.++..+..+
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tp 52 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTP 52 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--H
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCH
Confidence 68888 9999999999999999999999999999999999999998666443
No 2
>PF13606 Ank_3: Ankyrin repeat
Probab=99.30 E-value=6.3e-12 Score=54.10 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=27.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 035417 14 DRKTPIDVAKLNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 14 ~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~ 42 (61)
+|+||||+|+..|+.+++++|+++|+++|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 59999999999999999999999999876
No 3
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.29 E-value=3.1e-12 Score=65.77 Aligned_cols=45 Identities=22% Similarity=0.348 Sum_probs=33.7
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+++|++++.+|..|+||||+|+.+++.+++++|+++|++.+.++
T Consensus 45 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 45 LLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred HHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 456788888888888888888888888888888888888776653
No 4
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.27 E-value=1.1e-11 Score=54.07 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=30.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 14 DRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 14 ~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+|+||||+|+..++.+++++|+++|++++.++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 59999999999999999999999999988765
No 5
>PHA02946 ankyin-like protein; Provisional
Probab=99.18 E-value=3.1e-11 Score=77.56 Aligned_cols=48 Identities=13% Similarity=0.152 Sum_probs=43.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|+++|+++|.+|.+|+||||+|+..|+.+++++|+++|++++.++..+
T Consensus 58 Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g 105 (446)
T PHA02946 58 LLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQH 105 (446)
T ss_pred HHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCC
Confidence 568999999999999999999999999999999999999988776543
No 6
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.16 E-value=2.7e-11 Score=57.80 Aligned_cols=35 Identities=29% Similarity=0.513 Sum_probs=23.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPA 35 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll 35 (61)
|+++|++++.+|.+|+||||+|+..|+.+++++|+
T Consensus 20 Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 20 LLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp HHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 35677788888888888888888888888887775
No 7
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.15 E-value=2.4e-11 Score=80.26 Aligned_cols=58 Identities=16% Similarity=0.182 Sum_probs=48.2
Q ss_pred CccCCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc----cccccccCCCc
Q 035417 1 MLKNGSAVTLQN-MDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY----RHFSVLDESTP 58 (61)
Q Consensus 1 Ll~~ga~~~~~d-~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~----~~~~~~~~~~~ 58 (61)
|+++||++|+.. .-+.||||||+.+|+..++++|+++|++++..|.. .|+|+..++++
T Consensus 97 li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~ 159 (600)
T KOG0509|consen 97 LISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTA 159 (600)
T ss_pred HHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchH
Confidence 578899999887 78899999999999999999999999998888765 37776666654
No 8
>PHA02795 ankyrin-like protein; Provisional
Probab=99.12 E-value=9.1e-11 Score=75.69 Aligned_cols=56 Identities=11% Similarity=-0.079 Sum_probs=48.3
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc----cccccccCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY----RHFSVLDES 56 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~----~~~~~~~~~ 56 (61)
|+++||++|.+|..|+||||+|+..|+.+++++|+++|++.+.++.. .|+|+..++
T Consensus 207 LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 207 CIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred HHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 57899999999999999999999999999999999999998877654 455555543
No 9
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=9.1e-11 Score=68.95 Aligned_cols=49 Identities=12% Similarity=0.242 Sum_probs=40.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRH 49 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 49 (61)
|+++|+.++.+|..|.||||-|+.-|..+++++|+..|+..|++|.++.
T Consensus 125 Lle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~ 173 (226)
T KOG4412|consen 125 LLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGF 173 (226)
T ss_pred HHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCc
Confidence 5678888888888888888888888888888888888888887776653
No 10
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.06 E-value=2.2e-10 Score=80.02 Aligned_cols=45 Identities=18% Similarity=0.233 Sum_probs=41.7
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
||++|+|++++|+.|+||||.||..|+.+++.+|+++|+++|..+
T Consensus 559 LLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d 603 (1143)
T KOG4177|consen 559 LLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAAD 603 (1143)
T ss_pred hhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCccc
Confidence 689999999999999999999999999999999999999988776
No 11
>PHA02791 ankyrin-like protein; Provisional
Probab=99.04 E-value=3.3e-10 Score=69.65 Aligned_cols=56 Identities=14% Similarity=-0.024 Sum_probs=45.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc-----ccccccccCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF-----YRHFSVLDES 56 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~-----~~~~~~~~~~ 56 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.+.++. +.|+++..++
T Consensus 80 LL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~ 140 (284)
T PHA02791 80 LLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 140 (284)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCC
Confidence 4678999999999999999999999999999999999998766543 3355554433
No 12
>PHA03095 ankyrin-like protein; Provisional
Probab=99.02 E-value=3.8e-10 Score=71.67 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=42.4
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|++.|+++|.+|..|+||||+|+..|+.+++++|++.|++++..+..+
T Consensus 243 ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g 290 (471)
T PHA03095 243 LLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDG 290 (471)
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 357899999999999999999999999999999999999988776543
No 13
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.99 E-value=7.3e-10 Score=61.99 Aligned_cols=48 Identities=13% Similarity=0.187 Sum_probs=41.0
Q ss_pred CccCCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCcccccc
Q 035417 1 MLKNGSAVTLQN-MDRKTPIDVAKLNSQHDMLKLPAT-LHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d-~~g~tpl~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~ 48 (61)
|++.|++++.+| ..|+||||+|+..++.+++++|+. .|++.+.++..+
T Consensus 77 Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g 126 (154)
T PHA02736 77 LMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAF 126 (154)
T ss_pred HHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCC
Confidence 467899999998 599999999999999999999997 488877666443
No 14
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.99 E-value=5.7e-10 Score=72.01 Aligned_cols=47 Identities=4% Similarity=-0.109 Sum_probs=41.7
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
+..|+++|.+|..|+||||+|+..++.+++++|++.|++++.++..+
T Consensus 243 l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G 289 (494)
T PHA02989 243 ILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDG 289 (494)
T ss_pred HHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCC
Confidence 34578999999999999999999999999999999999988876443
No 15
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.98 E-value=7.8e-10 Score=70.46 Aligned_cols=48 Identities=21% Similarity=0.344 Sum_probs=43.3
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|+++|++++.+|..|.||||+|+..++.+++++|++.|++.+.++..+
T Consensus 236 Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g 283 (480)
T PHA03100 236 LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYG 283 (480)
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Confidence 568899999999999999999999999999999999999988776544
No 16
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.97 E-value=8.2e-10 Score=73.46 Aligned_cols=45 Identities=20% Similarity=0.276 Sum_probs=41.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|++.|++++.+|..|+||||+|+..|+.+++++|+++|++.+..+
T Consensus 164 Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~ 208 (682)
T PHA02876 164 LLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIA 208 (682)
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccC
Confidence 578999999999999999999999999999999999999877654
No 17
>PHA02741 hypothetical protein; Provisional
Probab=98.97 E-value=1e-09 Score=62.49 Aligned_cols=46 Identities=17% Similarity=0.309 Sum_probs=34.7
Q ss_pred CccCCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHh-CCCCCCcccc
Q 035417 1 MLKNGSAVTLQNM-DRKTPIDVAKLNSQHDMLKLPAT-LHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~v~~Ll~-~~~~~~~~~~ 46 (61)
|++.|++++.++. +|+||||+|+..++.+++++|+. .+++.+..+.
T Consensus 83 Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~ 130 (169)
T PHA02741 83 LIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNA 130 (169)
T ss_pred HHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC
Confidence 3567888888774 78888888888888888888886 4777666554
No 18
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.96 E-value=1.1e-09 Score=62.36 Aligned_cols=45 Identities=16% Similarity=0.212 Sum_probs=30.8
Q ss_pred CccCCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCccc
Q 035417 1 MLKNGSAVTLQN-MDRKTPIDVAKLNSQHDMLKLPAT-LHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d-~~g~tpl~~A~~~~~~~~v~~Ll~-~~~~~~~~~ 45 (61)
|+++|++++.+| ..|+||||+|+..++.+++++|+. .|++.+.++
T Consensus 79 Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d 125 (166)
T PHA02743 79 LVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAIN 125 (166)
T ss_pred HHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcC
Confidence 356677777776 467777777777777777777774 566655544
No 19
>PHA02791 ankyrin-like protein; Provisional
Probab=98.95 E-value=9.9e-10 Score=67.55 Aligned_cols=46 Identities=20% Similarity=0.107 Sum_probs=34.3
Q ss_pred CccCCCCccccCCCCCcH-HHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTP-IDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tp-l~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
||++|++++.+|..|.|| ||+|+..|+.+++++|+++|++.+..+.
T Consensus 179 LL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~ 225 (284)
T PHA02791 179 LLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNL 225 (284)
T ss_pred HHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcc
Confidence 466777777777777766 7777777777777777777777766654
No 20
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.95 E-value=1.2e-09 Score=64.23 Aligned_cols=46 Identities=22% Similarity=0.281 Sum_probs=29.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKL--NSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~--~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|.+|+||||+|+. .++.+++++|++.|++.+.++.
T Consensus 109 Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~ 156 (209)
T PHA02859 109 LIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDF 156 (209)
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccC
Confidence 356677777777777777776654 3466677777777766655543
No 21
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.95 E-value=1.2e-09 Score=67.74 Aligned_cols=44 Identities=18% Similarity=0.116 Sum_probs=32.5
Q ss_pred CccCCCCcccc----CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q 035417 1 MLKNGSAVTLQ----NMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 1 Ll~~ga~~~~~----d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~ 44 (61)
|+++|++++.+ +..|.||||+|+..++.+++++|+++|++.+..
T Consensus 52 LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~ 99 (300)
T PHA02884 52 ILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRY 99 (300)
T ss_pred HHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcc
Confidence 46777777776 357788888887777888888888877777653
No 22
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.95 E-value=6.7e-10 Score=70.59 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=38.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATL-HVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-~~~~~~~~ 45 (61)
||..|||+|.+|.+|.|+|+.||+.||.|++++|+.. +++....|
T Consensus 359 LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD 404 (452)
T KOG0514|consen 359 LLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTD 404 (452)
T ss_pred HHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeec
Confidence 5788999999999999999999999999999999976 44444333
No 23
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=98.94 E-value=6.4e-10 Score=65.42 Aligned_cols=41 Identities=12% Similarity=0.069 Sum_probs=25.0
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 5 GSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 5 ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+|+|..+..|+|+||||+.+|..+++++|+++|+.+++.|
T Consensus 96 ~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD 136 (226)
T KOG4412|consen 96 GADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKD 136 (226)
T ss_pred CCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccc
Confidence 56666666666666666666666666666666666555554
No 24
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.93 E-value=1.3e-09 Score=74.19 Aligned_cols=50 Identities=20% Similarity=0.193 Sum_probs=43.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCC--HHHHHHHHhCCCCCCcccccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQ--HDMLKLPATLHVNDGFRQFYRHF 50 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~--~~~v~~Ll~~~~~~~~~~~~~~~ 50 (61)
|+++|++++.+|..|+||||+|+..|+ .+++++|+++|++++.++..+..
T Consensus 198 LLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~T 249 (764)
T PHA02716 198 LCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMS 249 (764)
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 568999999999999999999999885 58999999999998887655443
No 25
>PHA02798 ankyrin-like protein; Provisional
Probab=98.93 E-value=1.2e-09 Score=70.51 Aligned_cols=47 Identities=17% Similarity=0.237 Sum_probs=34.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcC---CHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNS---QHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~---~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|+|+|.+|.+|+||||+|+.++ +.+++++|+++|++.+..+..
T Consensus 95 Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~ 144 (489)
T PHA02798 95 LIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKD 144 (489)
T ss_pred HHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCC
Confidence 45677777777777888888777764 567777777777777666543
No 26
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.93 E-value=1.4e-09 Score=72.80 Aligned_cols=47 Identities=15% Similarity=0.292 Sum_probs=42.4
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|++.|+++|.+|..|+||||+|+.+|+.+++++|++.|++.+.++..
T Consensus 101 LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~ 147 (664)
T PTZ00322 101 LLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKD 147 (664)
T ss_pred HHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Confidence 56789999999999999999999999999999999999998877644
No 27
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.93 E-value=1.8e-09 Score=63.48 Aligned_cols=46 Identities=11% Similarity=0.100 Sum_probs=24.5
Q ss_pred CccCCCCccccC-CCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQN-MDRKTPIDVAKLN---SQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d-~~g~tpl~~A~~~---~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.++ ..|+||||+|+.. +..+++++|+++|++.+.++.
T Consensus 72 Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~ 121 (209)
T PHA02859 72 LIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDE 121 (209)
T ss_pred HHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCC
Confidence 345556665554 3556666655432 245566666666655555443
No 28
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.93 E-value=1.4e-09 Score=74.06 Aligned_cols=48 Identities=17% Similarity=0.182 Sum_probs=43.7
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|++.|+++|.+|..|+||||+|+.+|+.+++++|+++|++.+.++..+
T Consensus 544 Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G 591 (823)
T PLN03192 544 LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANG 591 (823)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCC
Confidence 468899999999999999999999999999999999999988876544
No 29
>PHA02798 ankyrin-like protein; Provisional
Probab=98.92 E-value=1.1e-09 Score=70.55 Aligned_cols=46 Identities=4% Similarity=-0.098 Sum_probs=40.6
Q ss_pred cCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 3 KNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 3 ~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
..++|+|.+|..|+||||+|+..++.+++++|++.|++++..+..+
T Consensus 246 ~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G 291 (489)
T PHA02798 246 FSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELG 291 (489)
T ss_pred HhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCC
Confidence 3468999999999999999999999999999999999988776443
No 30
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.92 E-value=1.8e-09 Score=68.02 Aligned_cols=43 Identities=12% Similarity=0.152 Sum_probs=23.7
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~ 44 (61)
+++|++++.+|..|+||||+|+..|+.+++++|++.|++++..
T Consensus 155 l~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~ 197 (413)
T PHA02875 155 IDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYF 197 (413)
T ss_pred HhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcC
Confidence 3455555555555555555555555555555555555555443
No 31
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.92 E-value=1.2e-09 Score=58.45 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=37.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~ 44 (61)
|+..||+++.+|++|.|||..|+-.||..+|++|++.|++-..+
T Consensus 53 li~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~ 96 (117)
T KOG4214|consen 53 LISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIH 96 (117)
T ss_pred HHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCccccee
Confidence 45678999999999999999999999999999999999875443
No 32
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.91 E-value=1.7e-09 Score=73.56 Aligned_cols=48 Identities=21% Similarity=0.203 Sum_probs=44.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|+++|+++|.+|.+|+||||+|+..|+.+++++|+++|++.+..+..+
T Consensus 641 Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g 688 (823)
T PLN03192 641 LLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDD 688 (823)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCC
Confidence 578999999999999999999999999999999999999988776554
No 33
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.90 E-value=2.2e-09 Score=66.58 Aligned_cols=48 Identities=13% Similarity=0.178 Sum_probs=42.9
Q ss_pred CccCCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQ-NMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~-d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|+++||+++.+ +..|.||||+|+..++.+++++|+..|++.+..+..+
T Consensus 89 LL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G 137 (300)
T PHA02884 89 LIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDM 137 (300)
T ss_pred HHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 57899999986 4689999999999999999999999999988876554
No 34
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.89 E-value=2.6e-09 Score=67.28 Aligned_cols=47 Identities=13% Similarity=0.225 Sum_probs=40.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.++..|.||||+|+..|+.+++++|+++|++.+.++..
T Consensus 121 Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~ 167 (413)
T PHA02875 121 LIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCC 167 (413)
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Confidence 56789999999999999999999999999999999999887766543
No 35
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.89 E-value=2.5e-09 Score=68.73 Aligned_cols=43 Identities=16% Similarity=0.264 Sum_probs=21.9
Q ss_pred ccCCCCccccCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q 035417 2 LKNGSAVTLQNMD-RKTPIDVAKLNSQHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 2 l~~ga~~~~~d~~-g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~ 44 (61)
+++|++++.+|.. |+||||+|+.+|+.+++++|++.|++.+..
T Consensus 154 l~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~ 197 (477)
T PHA02878 154 LSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIP 197 (477)
T ss_pred HHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCc
Confidence 3445555555544 555555555555555555555555544433
No 36
>PHA03095 ankyrin-like protein; Provisional
Probab=98.88 E-value=2.7e-09 Score=67.83 Aligned_cols=46 Identities=20% Similarity=0.231 Sum_probs=31.9
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNS-QHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~-~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|+++|.+|..|+||||+|+..+ ..+++++|+++|++.+.++.
T Consensus 69 Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~ 115 (471)
T PHA03095 69 LLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDK 115 (471)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCC
Confidence 45667777777777777777777777 47777777777776665543
No 37
>PHA02730 ankyrin-like protein; Provisional
Probab=98.88 E-value=2.2e-09 Score=72.22 Aligned_cols=46 Identities=9% Similarity=-0.053 Sum_probs=43.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|+++|++|..|+||||+|+..++.+++++|+++|++.+..+.
T Consensus 448 LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~ 493 (672)
T PHA02730 448 LSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSR 493 (672)
T ss_pred HHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCC
Confidence 5689999999999999999999999999999999999999887774
No 38
>PHA02730 ankyrin-like protein; Provisional
Probab=98.88 E-value=1.4e-09 Score=73.08 Aligned_cols=40 Identities=20% Similarity=0.263 Sum_probs=33.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHhCCCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNS--QHDMLKLPATLHVN 40 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~--~~~~v~~Ll~~~~~ 40 (61)
||++||+++++|..|+||||+|+..+ +.+++++|++.|++
T Consensus 63 LLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~ 104 (672)
T PHA02730 63 LLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSN 104 (672)
T ss_pred HHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCC
Confidence 57888888888888888888888866 68888888888663
No 39
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.87 E-value=3.1e-09 Score=68.31 Aligned_cols=46 Identities=13% Similarity=0.226 Sum_probs=31.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+.++.
T Consensus 187 Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~ 232 (477)
T PHA02878 187 LLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDK 232 (477)
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCC
Confidence 3566677777777777777777777777777777777766665543
No 40
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.87 E-value=2.9e-09 Score=70.88 Aligned_cols=51 Identities=16% Similarity=0.266 Sum_probs=43.7
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCCCccccccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNS-QHDMLKLPATLHVNDGFRQFYRHFS 51 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~-~~~~v~~Ll~~~~~~~~~~~~~~~~ 51 (61)
|+++|+++|.+|.+|+||||+|+..+ +.+++++|++.|++.+..+..+.++
T Consensus 428 Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tp 479 (682)
T PHA02876 428 LIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYP 479 (682)
T ss_pred HHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 46789999999999999999999876 6899999999999988887555443
No 41
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.86 E-value=1.3e-09 Score=63.87 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=31.4
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~ 44 (61)
|+..||+++++...||||||.||..++.+++.+|+++|+++++.
T Consensus 116 ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~ 159 (228)
T KOG0512|consen 116 LLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQ 159 (228)
T ss_pred HHHccCCcccccccCccchhhhhcccchhHHHHHHhccCccccc
Confidence 34567777777777777777777777777777777777776654
No 42
>PHA02917 ankyrin-like protein; Provisional
Probab=98.85 E-value=4e-09 Score=70.79 Aligned_cols=47 Identities=11% Similarity=0.047 Sum_probs=43.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++||+++.+|..|+||||+|+..++.+++++|++.|++.+..+..
T Consensus 438 Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~ 484 (661)
T PHA02917 438 CLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNN 484 (661)
T ss_pred HHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCC
Confidence 56899999999999999999999999999999999999998877644
No 43
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.84 E-value=5.9e-09 Score=53.39 Aligned_cols=50 Identities=18% Similarity=0.240 Sum_probs=38.5
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc----ccccccccC
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF----YRHFSVLDE 55 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~----~~~~~~~~~ 55 (61)
++.+.+++. |+||||+|+..|+.+++++|++.|++.+.++. +.|+++..+
T Consensus 17 l~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 70 (89)
T PF12796_consen 17 LEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENG 70 (89)
T ss_dssp HHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTT
T ss_pred HHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcC
Confidence 456666665 99999999999999999999999999888753 345554433
No 44
>PHA02792 ankyrin-like protein; Provisional
Probab=98.84 E-value=3.5e-09 Score=70.85 Aligned_cols=48 Identities=2% Similarity=-0.089 Sum_probs=43.3
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|+++||++|.+|..|+||||+|+..++.+++++|+++|++.+..+..+
T Consensus 396 LIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G 443 (631)
T PHA02792 396 CKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYG 443 (631)
T ss_pred HHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 357899999999999999999999999999999999999988776544
No 45
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.82 E-value=6e-09 Score=66.25 Aligned_cols=41 Identities=20% Similarity=0.285 Sum_probs=19.9
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~ 42 (61)
+++|++++.+|..|.||||+|+..++.+++++|++.|++.+
T Consensus 144 l~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n 184 (434)
T PHA02874 144 FEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN 184 (434)
T ss_pred HhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC
Confidence 34444444444455555555555555555555555444433
No 46
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.80 E-value=6.3e-09 Score=67.23 Aligned_cols=45 Identities=24% Similarity=0.406 Sum_probs=29.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCC-Cccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLN---SQHDMLKLPATLHVND-GFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~---~~~~~v~~Ll~~~~~~-~~~~ 45 (61)
|+++|||+|.+|..|+||||.|+.. ++.+++++|+++|++. +..+
T Consensus 94 Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d 142 (494)
T PHA02989 94 LLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKN 142 (494)
T ss_pred HHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccC
Confidence 4566777777777777777766543 4567777777777766 4443
No 47
>PHA02946 ankyin-like protein; Provisional
Probab=98.78 E-value=8e-09 Score=66.55 Aligned_cols=46 Identities=17% Similarity=0.293 Sum_probs=33.9
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNS--QHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|.+|+||||+|+.++ +.+++++|+. |++.+.++..
T Consensus 194 Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~ 241 (446)
T PHA02946 194 MMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKF 241 (446)
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCC
Confidence 45678888888888888888888765 6778888774 6776666543
No 48
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.78 E-value=1e-08 Score=65.24 Aligned_cols=46 Identities=15% Similarity=0.175 Sum_probs=41.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|++.|++++.+|..|.||||+|+..|+.+++++|++.|++.+.++.
T Consensus 110 ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~ 155 (434)
T PHA02874 110 ILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDD 155 (434)
T ss_pred HHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCC
Confidence 3577899999999999999999999999999999999999877654
No 49
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.76 E-value=1.5e-08 Score=56.67 Aligned_cols=42 Identities=19% Similarity=0.172 Sum_probs=37.9
Q ss_pred Ccc-CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 035417 1 MLK-NGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 1 Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~ 42 (61)
|++ .|++++.+|..|+||||+|+..++.+++++|+..|++.+
T Consensus 111 Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 111 LCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 344 489999999999999999999999999999999998764
No 50
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.76 E-value=3.7e-09 Score=63.90 Aligned_cols=51 Identities=12% Similarity=-0.000 Sum_probs=43.1
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccccccC
Q 035417 5 GSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVLDE 55 (61)
Q Consensus 5 ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 55 (61)
...+|..|+.|.|||.||+..|+..+|++|+..|++++..-.++-.+....
T Consensus 150 ~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLA 200 (296)
T KOG0502|consen 150 NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLA 200 (296)
T ss_pred hccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHH
Confidence 456888999999999999999999999999999999887776665555433
No 51
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.73 E-value=1.2e-08 Score=69.45 Aligned_cols=44 Identities=14% Similarity=0.103 Sum_probs=34.4
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCH-----HHHHHHHhCCCCCCcc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQH-----DMLKLPATLHVNDGFR 44 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----~~v~~Ll~~~~~~~~~ 44 (61)
|++.|+++|.+|.+|+||||+|+.+|+. +++++|+++|++.+..
T Consensus 521 LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~ 569 (764)
T PHA02716 521 LLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV 569 (764)
T ss_pred HHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH
Confidence 4677888888888888888888887765 7888888888776544
No 52
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.73 E-value=2.5e-08 Score=56.81 Aligned_cols=44 Identities=11% Similarity=0.000 Sum_probs=40.2
Q ss_pred cCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 3 KNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 3 ~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
+.|++++.+|..|+||||+|+..++.+++++|+++|++.+..+.
T Consensus 116 ~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~ 159 (166)
T PHA02743 116 QLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLS 159 (166)
T ss_pred ccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccc
Confidence 47999999999999999999999999999999999998876653
No 53
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.71 E-value=3.7e-09 Score=66.13 Aligned_cols=53 Identities=11% Similarity=-0.001 Sum_probs=41.4
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVL 53 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 53 (61)
||+..+|+|+.++.|.|||||||..|+..+.+-|+..|+..++.+.+++..+-
T Consensus 86 ll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpld 138 (448)
T KOG0195|consen 86 LLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLD 138 (448)
T ss_pred HHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchh
Confidence 45667788888888888888888888888888888888888887777766543
No 54
>PHA02795 ankyrin-like protein; Provisional
Probab=98.70 E-value=1.9e-08 Score=65.12 Aligned_cols=44 Identities=20% Similarity=0.169 Sum_probs=39.3
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcC--------CHHHHHHHHhCCCCCCcc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNS--------QHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~--------~~~~v~~Ll~~~~~~~~~ 44 (61)
|+++|++++.+|..|+||||+|+.+| +.+++++|+++|++.+..
T Consensus 240 LL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~ 291 (437)
T PHA02795 240 LLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCI 291 (437)
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCch
Confidence 57899999999999999999999988 469999999999976543
No 55
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=98.70 E-value=1.5e-08 Score=67.32 Aligned_cols=47 Identities=17% Similarity=0.253 Sum_probs=31.3
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|||++.+|.+|.+|+|.|++.++.-++-+|+.++++.+.+|..
T Consensus 131 LlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~ 177 (600)
T KOG0509|consen 131 LLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNN 177 (600)
T ss_pred HHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCC
Confidence 45667777777777777777777777766666777666666655543
No 56
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.66 E-value=4.1e-08 Score=46.58 Aligned_cols=33 Identities=15% Similarity=0.122 Sum_probs=27.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 15 RKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 15 g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+||||+|+..|+.+++++|++.|.+.+.++..
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~ 33 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDED 33 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TT
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCC
Confidence 789999999999999999999999998877643
No 57
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.66 E-value=2.9e-08 Score=63.33 Aligned_cols=41 Identities=17% Similarity=0.149 Sum_probs=20.9
Q ss_pred ccCCCCccccCCCCCcHHHHHH--HcCCHHHHHHHHhCCCCCC
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAK--LNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~--~~~~~~~v~~Ll~~~~~~~ 42 (61)
+++|++++..|..|.||||+|+ ..++.+++++|++.|++.+
T Consensus 93 l~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~ 135 (480)
T PHA03100 93 LEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVN 135 (480)
T ss_pred HHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCC
Confidence 3445555555555555555555 5555555555555554443
No 58
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.65 E-value=4.4e-08 Score=55.47 Aligned_cols=53 Identities=25% Similarity=0.355 Sum_probs=44.0
Q ss_pred CccCCC---CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccccc
Q 035417 1 MLKNGS---AVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVL 53 (61)
Q Consensus 1 Ll~~ga---~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 53 (61)
|++.|+ ..+.+|..|+||||+|+..|+.+++++|++.+++.+.++.++..+..
T Consensus 130 ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~ 185 (235)
T COG0666 130 LLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALD 185 (235)
T ss_pred HHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchh
Confidence 467788 55566999999999999999999999999999998887666554443
No 59
>PHA02917 ankyrin-like protein; Provisional
Probab=98.65 E-value=2.8e-08 Score=66.83 Aligned_cols=45 Identities=7% Similarity=0.152 Sum_probs=39.4
Q ss_pred CccCCCCccccCCCCCcHHHHH--HHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVA--KLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A--~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+++|+|+|.+|.+|+|||+++ +.+++.+++++|+++|++.+..+
T Consensus 122 Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d 168 (661)
T PHA02917 122 LVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYED 168 (661)
T ss_pred HHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccc
Confidence 5789999999999999999964 45789999999999999987553
No 60
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.63 E-value=1.9e-08 Score=66.60 Aligned_cols=38 Identities=21% Similarity=0.185 Sum_probs=20.7
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHV 39 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~ 39 (61)
|+.|+++|+.|.+||||||.|+.-++.-+++.|.+.|+
T Consensus 603 i~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~Ga 640 (752)
T KOG0515|consen 603 IEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGA 640 (752)
T ss_pred HhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccc
Confidence 44555555555555555555555555555555555554
No 61
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.60 E-value=2.7e-08 Score=69.91 Aligned_cols=46 Identities=22% Similarity=0.275 Sum_probs=42.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
++++|++++.++.+|.||||.||..|+..+|++|+++|++.+.++.
T Consensus 526 l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~ 571 (1143)
T KOG4177|consen 526 LLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDK 571 (1143)
T ss_pred HhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCC
Confidence 4678999999999999999999999999999999999999888773
No 62
>PHA02741 hypothetical protein; Provisional
Probab=98.60 E-value=7.5e-08 Score=54.80 Aligned_cols=52 Identities=10% Similarity=0.110 Sum_probs=42.1
Q ss_pred CCCCccccCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCCCccc-----cccccccccC
Q 035417 4 NGSAVTLQNMDRKTPIDVAKLNSQ----HDMLKLPATLHVNDGFRQ-----FYRHFSVLDE 55 (61)
Q Consensus 4 ~ga~~~~~d~~g~tpl~~A~~~~~----~~~v~~Ll~~~~~~~~~~-----~~~~~~~~~~ 55 (61)
.|++++.+|..|+||||+|+..++ .+++++|++.|++.+.++ .+.|+++...
T Consensus 49 ~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~ 109 (169)
T PHA02741 49 HAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRR 109 (169)
T ss_pred hhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcC
Confidence 468899999999999999999998 589999999999877654 2346555433
No 63
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.59 E-value=1.5e-08 Score=61.36 Aligned_cols=48 Identities=10% Similarity=0.008 Sum_probs=41.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
||.++.|+|..|.+|-|||.+|+..|+.++++.|+..|++.+..+.++
T Consensus 212 LL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsG 259 (296)
T KOG0502|consen 212 LLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSG 259 (296)
T ss_pred HHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccC
Confidence 567889999999999999999999999999999999999877666444
No 64
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.57 E-value=1.4e-08 Score=66.43 Aligned_cols=40 Identities=13% Similarity=0.132 Sum_probs=16.9
Q ss_pred cCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 035417 3 KNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 3 ~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~ 42 (61)
++|+|++..|..|.|.||+||.+|+.+++++|++.|+++|
T Consensus 138 E~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn 177 (615)
T KOG0508|consen 138 EHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVN 177 (615)
T ss_pred HcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcc
Confidence 3444444444444444444444444444444444444433
No 65
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.56 E-value=1e-07 Score=56.04 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=42.6
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccccccCC
Q 035417 7 AVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVLDES 56 (61)
Q Consensus 7 ~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 56 (61)
-+|.+|.+|.||||-|+.+|+..+++.|+..|++.+.+-.-+|.++...|
T Consensus 89 ~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAc 138 (228)
T KOG0512|consen 89 HVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSAC 138 (228)
T ss_pred cccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhh
Confidence 57899999999999999999999999999999998877656665554443
No 66
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.55 E-value=4.8e-08 Score=52.38 Aligned_cols=48 Identities=21% Similarity=0.200 Sum_probs=40.8
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccccc
Q 035417 5 GSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVL 53 (61)
Q Consensus 5 ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 53 (61)
|.++|.. ..|++|||+|+..|+.+++++|+..|++.+..+.|+..+.+
T Consensus 25 g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLL 72 (117)
T KOG4214|consen 25 GLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLL 72 (117)
T ss_pred cccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHH
Confidence 4455533 48999999999999999999999999999999988876654
No 67
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.53 E-value=1.4e-07 Score=63.35 Aligned_cols=45 Identities=27% Similarity=0.364 Sum_probs=39.7
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC-------CCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATL-------HVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-------~~~~~~~~ 45 (61)
|+++|++++.+|.+|+||||+|+..++.+++++|+.+ +++.+..+
T Consensus 134 LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~ 185 (664)
T PTZ00322 134 LLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDS 185 (664)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccc
Confidence 5789999999999999999999999999999999998 66554444
No 68
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.46 E-value=3.5e-07 Score=51.74 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=36.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCC-----HHHHHHHHhCCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQ-----HDMLKLPATLHV 39 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~-----~~~v~~Ll~~~~ 39 (61)
|+..|++++.+|.+|.||||+|+.+++ .+++++|++.|+
T Consensus 92 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~ 135 (235)
T COG0666 92 LLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGA 135 (235)
T ss_pred HHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCC
Confidence 356789999999999999999999999 999999999999
No 69
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.40 E-value=1.3e-07 Score=62.10 Aligned_cols=45 Identities=22% Similarity=0.294 Sum_probs=40.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
||..|.+++.+|.+||||||.|+..++.+++++|+.+|++.+...
T Consensus 217 Ll~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t 261 (527)
T KOG0505|consen 217 LLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKT 261 (527)
T ss_pred HHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhh
Confidence 567899999999999999999999999999999999999876554
No 70
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.40 E-value=3.2e-07 Score=60.28 Aligned_cols=54 Identities=15% Similarity=0.241 Sum_probs=48.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccccccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVLD 54 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 54 (61)
|+++||++|.......|||--||..|+.+++|+|+++|+++++.+.++|.-.+-
T Consensus 103 L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmI 156 (615)
T KOG0508|consen 103 LLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMI 156 (615)
T ss_pred HHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEe
Confidence 578899999988899999999999999999999999999999999888766553
No 71
>PHA02792 ankyrin-like protein; Provisional
Probab=98.38 E-value=1.2e-07 Score=63.75 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=40.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHH-cCCHHHHHHHHhCCCCCCccccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKL-NSQHDMLKLPATLHVNDGFRQFYRH 49 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~~ 49 (61)
|+++|||+|.++..|.||+++|+. +++.+++++|++.|++......++.
T Consensus 91 LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~ 140 (631)
T PHA02792 91 LISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGY 140 (631)
T ss_pred HHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCc
Confidence 578999999999999999999965 7999999999999997544433333
No 72
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.37 E-value=4.6e-07 Score=60.28 Aligned_cols=46 Identities=11% Similarity=0.012 Sum_probs=40.8
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccccccc
Q 035417 7 AVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSV 52 (61)
Q Consensus 7 ~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 52 (61)
|+...+..|.|+||-|+..||.+||+||++.|+++|..|..+|..+
T Consensus 575 DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPL 620 (752)
T KOG0515|consen 575 DPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPL 620 (752)
T ss_pred CCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchh
Confidence 5666789999999999999999999999999999999987766544
No 73
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.32 E-value=2.7e-07 Score=60.62 Aligned_cols=44 Identities=18% Similarity=0.164 Sum_probs=33.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~ 44 (61)
|+++|++||.+|..||||||.|+.-++..++++|+.+|++....
T Consensus 92 l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~av 135 (527)
T KOG0505|consen 92 LVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAV 135 (527)
T ss_pred HHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhc
Confidence 45778888888888888888888888888888888887764433
No 74
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.24 E-value=8.9e-07 Score=55.67 Aligned_cols=42 Identities=21% Similarity=0.345 Sum_probs=21.0
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGF 43 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~ 43 (61)
|++|+.+|..+.-..||||+|+..|+..+|+.|+++.++.|+
T Consensus 54 l~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna 95 (448)
T KOG0195|consen 54 LSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA 95 (448)
T ss_pred HhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch
Confidence 344555555555455555555555555555555555444443
No 75
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.22 E-value=1.4e-06 Score=59.89 Aligned_cols=46 Identities=17% Similarity=0.214 Sum_probs=40.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|+|+|..|..|.||||.||..++.|..+.|++.|+++.-.+.
T Consensus 140 Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~ 185 (929)
T KOG0510|consen 140 LLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDI 185 (929)
T ss_pred HHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccC
Confidence 5678999999999999999999999999988999999988654443
No 76
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.20 E-value=1.1e-06 Score=56.30 Aligned_cols=51 Identities=12% Similarity=0.083 Sum_probs=45.2
Q ss_pred CCcccc-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccccccCC
Q 035417 6 SAVTLQ-NMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVLDES 56 (61)
Q Consensus 6 a~~~~~-d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 56 (61)
.|||++ ...|+|+|++|+..|...+++.|+..|+++|++|..+..++|+.+
T Consensus 330 gnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~ 381 (452)
T KOG0514|consen 330 GDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAA 381 (452)
T ss_pred cCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhh
Confidence 377876 578999999999999999999999999999999988888887654
No 77
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=98.18 E-value=6.4e-06 Score=32.49 Aligned_cols=28 Identities=25% Similarity=0.341 Sum_probs=25.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 035417 14 DRKTPIDVAKLNSQHDMLKLPATLHVND 41 (61)
Q Consensus 14 ~g~tpl~~A~~~~~~~~v~~Ll~~~~~~ 41 (61)
.|.||+++|+..+..++++.|++.+.+.
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 4789999999999999999999988754
No 78
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.16 E-value=1.8e-06 Score=59.44 Aligned_cols=45 Identities=13% Similarity=0.208 Sum_probs=34.2
Q ss_pred CccCCCCcc---ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVT---LQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~---~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
||..||+.. ..|.+|.||||.|+..|+..+|++|+.+|++.+.++
T Consensus 360 Ll~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n 407 (929)
T KOG0510|consen 360 LLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKN 407 (929)
T ss_pred HHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeecc
Confidence 456777665 458888888888888888888888888888775544
No 79
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.15 E-value=2.4e-06 Score=55.13 Aligned_cols=41 Identities=20% Similarity=0.226 Sum_probs=38.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVND 41 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~ 41 (61)
|++.|+++|++|....+||.+|+.-||..++++|++.|+-.
T Consensus 55 LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC 95 (516)
T KOG0511|consen 55 LVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC 95 (516)
T ss_pred HHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc
Confidence 56789999999999999999999999999999999999753
No 80
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.12 E-value=1.5e-06 Score=54.54 Aligned_cols=53 Identities=13% Similarity=0.100 Sum_probs=40.4
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc-----ccccccccccCCCcc
Q 035417 7 AVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFR-----QFYRHFSVLDESTPV 59 (61)
Q Consensus 7 ~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~-----~~~~~~~~~~~~~~~ 59 (61)
++|.+|..|.|+|..|+.+|+.+.+++|++.|+++|-. ..+.+|+.+.+-+.|
T Consensus 37 ~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dv 94 (396)
T KOG1710|consen 37 QVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDV 94 (396)
T ss_pred hhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchH
Confidence 47778888888888888888888888888888886533 345677777766543
No 81
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.11 E-value=7.3e-06 Score=42.66 Aligned_cols=38 Identities=26% Similarity=0.420 Sum_probs=21.8
Q ss_pred cCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 035417 3 KNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVN 40 (61)
Q Consensus 3 ~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~ 40 (61)
+.|++++..+..|.||+|+|+..++.+++++|++.+.+
T Consensus 61 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~ 98 (126)
T cd00204 61 EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGAD 98 (126)
T ss_pred HcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 44445555555666666666666666666666665533
No 82
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.07 E-value=5.1e-06 Score=49.34 Aligned_cols=41 Identities=7% Similarity=0.027 Sum_probs=36.0
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCccc
Q 035417 5 GSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLH-VNDGFRQ 45 (61)
Q Consensus 5 ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~-~~~~~~~ 45 (61)
+.++|++|..||||++.|+..|..+.+.+|+.+| +.+...+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d 43 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTD 43 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccc
Confidence 4689999999999999999999999999999999 5555444
No 83
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.05 E-value=3.7e-06 Score=56.86 Aligned_cols=54 Identities=15% Similarity=0.225 Sum_probs=43.2
Q ss_pred CccCCCCccccC--------------CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc----ccccccc
Q 035417 1 MLKNGSAVTLQN--------------MDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY----RHFSVLD 54 (61)
Q Consensus 1 Ll~~ga~~~~~d--------------~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~----~~~~~~~ 54 (61)
|+++|++++.++ ..|.|||++|+..++.+++++|++.|++.+.++.. .|+++..
T Consensus 147 LL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~ 218 (743)
T TIGR00870 147 LLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVME 218 (743)
T ss_pred HHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhh
Confidence 578899998653 36999999999999999999999999987766543 4555443
No 84
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.04 E-value=1.3e-06 Score=41.81 Aligned_cols=22 Identities=32% Similarity=0.593 Sum_probs=12.5
Q ss_pred CccCCCCccccCCCCCcHHHHH
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVA 22 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A 22 (61)
|++.|++++.+|.+|+|||++|
T Consensus 35 Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 35 LLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp HHHCT--TT---TTS--HHHH-
T ss_pred HHHCcCCCCCCcCCCCCHHHhC
Confidence 4678999999999999999987
No 85
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.03 E-value=4.8e-06 Score=52.29 Aligned_cols=44 Identities=23% Similarity=0.202 Sum_probs=38.9
Q ss_pred CccCCCCccc-cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q 035417 1 MLKNGSAVTL-QNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 1 Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~ 44 (61)
||+.|+|+|. ++..+.||||+|+..|+..+..+|++.|+.....
T Consensus 64 ll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~v 108 (396)
T KOG1710|consen 64 LLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLV 108 (396)
T ss_pred HHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccc
Confidence 5789999986 5889999999999999999999999999875543
No 86
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.01 E-value=1.4e-05 Score=41.53 Aligned_cols=42 Identities=26% Similarity=0.399 Sum_probs=28.1
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGF 43 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~ 43 (61)
++.|++.+.++..|.||+++|+..+..+++++|++.+.+.+.
T Consensus 27 i~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 68 (126)
T cd00204 27 LENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA 68 (126)
T ss_pred HHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 345555566677777777777777777777777777654443
No 87
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.99 E-value=6.2e-06 Score=54.62 Aligned_cols=53 Identities=21% Similarity=0.157 Sum_probs=45.9
Q ss_pred CccCCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccccc
Q 035417 1 MLKNGSAVTLQN-MDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVL 53 (61)
Q Consensus 1 Ll~~ga~~~~~d-~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 53 (61)
||..||++|..+ ..|.||||.|+..|+..-+++|+-+|++++..+..+...+.
T Consensus 152 ll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~ 205 (669)
T KOG0818|consen 152 LLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVD 205 (669)
T ss_pred HHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHH
Confidence 567899999876 78999999999999999999999999999988866655544
No 88
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=97.93 E-value=7.8e-06 Score=55.29 Aligned_cols=51 Identities=12% Similarity=0.073 Sum_probs=40.3
Q ss_pred ccC--CCCccccCCCCCcHHH-HHHHcCCHHHHHHHHhCCCCCCcccccccccc
Q 035417 2 LKN--GSAVTLQNMDRKTPID-VAKLNSQHDMLKLPATLHVNDGFRQFYRHFSV 52 (61)
Q Consensus 2 l~~--ga~~~~~d~~g~tpl~-~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 52 (61)
++. +.++|..|..|+|||| .|+.+++.+++++|++.|+.+...+...|.+.
T Consensus 37 L~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~ 90 (743)
T TIGR00870 37 LEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLHAIS 90 (743)
T ss_pred hccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHH
Confidence 455 7899999999999999 88899999999999999964444444445443
No 89
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.89 E-value=8.8e-06 Score=56.67 Aligned_cols=45 Identities=18% Similarity=0.141 Sum_probs=39.9
Q ss_pred CccCCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQN-MDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d-~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
||.+|+|++.+| +.|+||||-|...|+.+++-+|+++|++.-+.|
T Consensus 71 LlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~D 116 (1267)
T KOG0783|consen 71 LLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKD 116 (1267)
T ss_pred HHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEec
Confidence 578999999998 689999999999999999999999998755444
No 90
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.81 E-value=1.7e-05 Score=54.39 Aligned_cols=35 Identities=11% Similarity=0.123 Sum_probs=28.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 14 DRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 14 ~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
.|..||.+|+.-++.+++++|+++|+|++++|..+
T Consensus 239 fGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~G 273 (782)
T KOG3676|consen 239 FGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNG 273 (782)
T ss_pred eccCchHHHHHcCCHHHHHHHHhcCCCCCccccCC
Confidence 35678888888888999999998888888887654
No 91
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.74 E-value=2.4e-05 Score=54.75 Aligned_cols=40 Identities=18% Similarity=0.359 Sum_probs=36.0
Q ss_pred cCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 035417 3 KNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 3 ~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~ 42 (61)
-.|..++.+|..||||||||+..|+.+++..|++-|++..
T Consensus 629 ~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~ 668 (975)
T KOG0520|consen 629 ADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPG 668 (975)
T ss_pred ecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccc
Confidence 3577899999999999999999999999999998887654
No 92
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.64 E-value=7.7e-05 Score=49.56 Aligned_cols=48 Identities=6% Similarity=0.068 Sum_probs=41.9
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccccccc
Q 035417 5 GSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSV 52 (61)
Q Consensus 5 ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 52 (61)
+..++.+|..|.||||.|+.-|+.+.+++|+..|++...++..++.++
T Consensus 45 ~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L 92 (560)
T KOG0522|consen 45 SLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPL 92 (560)
T ss_pred hceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHH
Confidence 456788999999999999999999999999999999888887666554
No 93
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.50 E-value=3.9e-05 Score=50.76 Aligned_cols=43 Identities=16% Similarity=0.294 Sum_probs=36.3
Q ss_pred cCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCccc
Q 035417 3 KNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATL-HVNDGFRQ 45 (61)
Q Consensus 3 ~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-~~~~~~~~ 45 (61)
-.|.|++.+|.+.+|+||.|+..|+.+++++|+.. +.+++.+|
T Consensus 527 l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kD 570 (622)
T KOG0506|consen 527 LQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKD 570 (622)
T ss_pred HhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhh
Confidence 46889999999999999999999999999999976 34455444
No 94
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=97.47 E-value=8.5e-05 Score=51.17 Aligned_cols=45 Identities=13% Similarity=0.237 Sum_probs=36.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
||.++..+|+.+..|-||||.|++.++.+++.+|+++|+++-.++
T Consensus 101 ll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~n 145 (854)
T KOG0507|consen 101 LLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRN 145 (854)
T ss_pred HHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccC
Confidence 355667788888889999999999999999999999888754443
No 95
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.41 E-value=0.00016 Score=48.83 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=28.4
Q ss_pred cCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 035417 3 KNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 3 ~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~ 42 (61)
=+|+|+-++|..|+|+|.||-+.|..+++.+|+.+|+.+.
T Consensus 682 Wyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 682 WYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred HhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 3567777777777777777777777777777777776543
No 96
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.27 E-value=0.00026 Score=48.85 Aligned_cols=45 Identities=20% Similarity=0.326 Sum_probs=36.9
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--CCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVN--DGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~--~~~~~ 45 (61)
|+++|||++++|..|+|-||.-+..-..++-+++++.|++ ...++
T Consensus 259 Ll~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N 305 (782)
T KOG3676|consen 259 LLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRN 305 (782)
T ss_pred HHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccc
Confidence 5678999999999999999988888888888888888887 44444
No 97
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.20 E-value=0.00013 Score=50.47 Aligned_cols=45 Identities=18% Similarity=0.237 Sum_probs=40.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+.+|+++|.+|..|++|+|.+...|+...+..|+++|++.++.+
T Consensus 675 ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~ 719 (785)
T KOG0521|consen 675 LLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFD 719 (785)
T ss_pred HHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccC
Confidence 578899999999999999999999999999999999998877654
No 98
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.05 E-value=0.0005 Score=46.55 Aligned_cols=52 Identities=19% Similarity=0.149 Sum_probs=40.3
Q ss_pred CccCCCC--cc--ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccccccc
Q 035417 1 MLKNGSA--VT--LQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSV 52 (61)
Q Consensus 1 Ll~~ga~--~~--~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 52 (61)
||.+|.. +| .-+.+|+|+||+||..|+..+.++|+=+|++...+|..+-.++
T Consensus 643 LLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l 698 (749)
T KOG0705|consen 643 LLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTAL 698 (749)
T ss_pred HHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhh
Confidence 3556643 22 3467889999999999999999999999999888876654433
No 99
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.87 E-value=0.0011 Score=44.21 Aligned_cols=37 Identities=16% Similarity=0.294 Sum_probs=31.9
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATL 37 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ 37 (61)
|+..||++..+|..||+|||-|+..|...++..++.+
T Consensus 74 Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 74 LLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred HHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 5788999999999999999999999998777666654
No 100
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=96.85 E-value=0.0015 Score=43.79 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=32.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPAT 36 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~ 36 (61)
|+-+|||+.++|.+|.||+.+|-..||-++.+-|++
T Consensus 186 L~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 186 LAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred HhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 346899999999999999999999999998888765
No 101
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=96.82 E-value=0.00042 Score=47.90 Aligned_cols=33 Identities=27% Similarity=0.246 Sum_probs=18.5
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 035417 7 AVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHV 39 (61)
Q Consensus 7 ~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~ 39 (61)
++|.+|.+|.|+||.|+.+|+.+++++|++..+
T Consensus 41 s~n~qd~~gfTalhha~Lng~~~is~llle~ea 73 (854)
T KOG0507|consen 41 SHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEA 73 (854)
T ss_pred cccccCccchhHHHHHHhcCchHHHHHHhcchh
Confidence 344555555555555555555555555555544
No 102
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=96.39 E-value=0.0016 Score=47.47 Aligned_cols=41 Identities=10% Similarity=0.164 Sum_probs=29.7
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVND 41 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~ 41 (61)
|+.+|++++.+|+.|.+||..|+..|+..+|+.|+++.++.
T Consensus 776 lv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~v 816 (2131)
T KOG4369|consen 776 LVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADV 816 (2131)
T ss_pred HHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhh
Confidence 34567777777777777777777777777777777766553
No 103
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=96.24 E-value=0.001 Score=46.95 Aligned_cols=40 Identities=8% Similarity=0.093 Sum_probs=35.9
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 8 VTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 8 ~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
.|.+|..|+|+||.|+..+..++++.|+++|.+...+|.-
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~E 84 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEE 84 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeecccc
Confidence 4678999999999999999999999999999998777643
No 104
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=96.06 E-value=0.0032 Score=45.97 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=20.0
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~ 42 (61)
|..|++-..++-...|||.+|...|+.++|++|+..|+.++
T Consensus 844 l~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseIn 884 (2131)
T KOG4369|consen 844 LNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEIN 884 (2131)
T ss_pred HHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccc
Confidence 34444444444445555555555555555555555554443
No 105
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.46 E-value=0.023 Score=38.23 Aligned_cols=39 Identities=8% Similarity=-0.077 Sum_probs=32.4
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 10 LQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 10 ~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
+.+.--.|+||+|+.+|..+++.+|++.|+++...+..+
T Consensus 425 ~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~G 463 (591)
T KOG2505|consen 425 ANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAG 463 (591)
T ss_pred ccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCC
Confidence 445557899999999999999999999999877666443
No 106
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=94.83 E-value=0.027 Score=37.86 Aligned_cols=35 Identities=20% Similarity=0.176 Sum_probs=31.5
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 035417 4 NGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLH 38 (61)
Q Consensus 4 ~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~ 38 (61)
.+++++.+|.+|+|||.-|..-++.+++++|.+.-
T Consensus 562 ~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 562 CKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred HcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHh
Confidence 46788999999999999999999999999997753
No 107
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.65 E-value=0.046 Score=38.44 Aligned_cols=30 Identities=17% Similarity=0.008 Sum_probs=26.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 035417 12 NMDRKTPIDVAKLNSQHDMLKLPATLHVND 41 (61)
Q Consensus 12 d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~ 41 (61)
-.-+.||+.+|+..++.||+++|+.+|+..
T Consensus 128 ft~ditPliLAAh~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 128 FTPDITPLMLAAHLNNFEILQCLLTRGHCI 157 (822)
T ss_pred CCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence 356899999999999999999999999763
No 108
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=94.53 E-value=0.035 Score=38.92 Aligned_cols=43 Identities=9% Similarity=-0.083 Sum_probs=35.1
Q ss_pred CCCCccc--cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 4 NGSAVTL--QNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 4 ~ga~~~~--~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
+++++|. +-..|.|+||.|+..+...++++|++.|++.|..+.
T Consensus 643 ~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~ 687 (785)
T KOG0521|consen 643 HGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDS 687 (785)
T ss_pred chhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhc
Confidence 3445553 346789999999999999999999999999887763
No 109
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=94.44 E-value=0.066 Score=32.19 Aligned_cols=39 Identities=10% Similarity=0.102 Sum_probs=35.3
Q ss_pred CccCC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 035417 1 MLKNG-SAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHV 39 (61)
Q Consensus 1 Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~ 39 (61)
|+.+| +.+...|..|.+++.+|..+|...+++.|.+.-.
T Consensus 31 llgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ 70 (223)
T KOG2384|consen 31 LLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDR 70 (223)
T ss_pred HhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence 57788 8999999999999999999999999999988643
No 110
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=93.15 E-value=0.11 Score=35.89 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=19.0
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 035417 5 GSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHV 39 (61)
Q Consensus 5 ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~ 39 (61)
|.++=.++.+..|.||+|+..|+.++|++++.+|.
T Consensus 889 gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p 923 (1004)
T KOG0782|consen 889 GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGP 923 (1004)
T ss_pred CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCC
Confidence 33444445555555566555555566665555553
No 111
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=91.31 E-value=0.33 Score=30.06 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=32.2
Q ss_pred ccCC-CCccc---cCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 035417 2 LKNG-SAVTL---QNMDRKTPIDVAKLNSQHDMLKLPATLHVN 40 (61)
Q Consensus 2 l~~g-a~~~~---~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~ 40 (61)
|++| +++|. +-..|.|-|.-|...+..+++.+|+++|+-
T Consensus 237 i~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 237 INRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 3455 56664 357899999999999999999999999984
No 112
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=89.97 E-value=0.23 Score=34.50 Aligned_cols=36 Identities=8% Similarity=0.045 Sum_probs=31.3
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q 035417 8 VTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGF 43 (61)
Q Consensus 8 ~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~ 43 (61)
++..|..|.|+||.|+..++..+.++|.+.|++..-
T Consensus 927 ld~~de~get~lhkaa~~~~r~vc~~lvdagasl~k 962 (1004)
T KOG0782|consen 927 LDMADETGETALHKAACQRNRAVCQLLVDAGASLRK 962 (1004)
T ss_pred HHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhhee
Confidence 466789999999999999999999999999987443
No 113
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=87.71 E-value=0.19 Score=35.58 Aligned_cols=34 Identities=9% Similarity=0.063 Sum_probs=31.2
Q ss_pred CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 035417 6 SAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHV 39 (61)
Q Consensus 6 a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~ 39 (61)
.++|.+|.-|+++|+.|..+.+.+++++|++++.
T Consensus 53 lninc~d~lGr~al~iai~nenle~~eLLl~~~~ 86 (822)
T KOG3609|consen 53 LNINCRDPLGRLALHIAIDNENLELQELLLDTSS 86 (822)
T ss_pred cchhccChHhhhceecccccccHHHHHHHhcCcc
Confidence 5788999999999999999999999999999864
No 114
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=87.21 E-value=0.44 Score=31.54 Aligned_cols=42 Identities=14% Similarity=-0.067 Sum_probs=33.1
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCcccc----ccccccccCCCcc
Q 035417 18 PIDVAKLNSQHDMLKLPATLHVNDGFRQF----YRHFSVLDESTPV 59 (61)
Q Consensus 18 pl~~A~~~~~~~~v~~Ll~~~~~~~~~~~----~~~~~~~~~~~~~ 59 (61)
-|-.||..|..+.++.|++.|.++|.++. +..++-++++-|+
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~v 84 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDV 84 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHH
Confidence 36789999999999999999999887763 3566666666543
No 115
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=82.34 E-value=0.47 Score=32.60 Aligned_cols=38 Identities=13% Similarity=0.289 Sum_probs=33.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLH 38 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~ 38 (61)
|++.|+.++.+|..|.+|+|+++..|..++++.++...
T Consensus 415 lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~ 452 (605)
T KOG3836|consen 415 LIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCK 452 (605)
T ss_pred eecccCccchhcccccccccccCCCCCHHHhhhhhhhh
Confidence 35677888999999999999999999999999887643
No 116
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=77.69 E-value=4.4 Score=25.17 Aligned_cols=40 Identities=20% Similarity=0.214 Sum_probs=36.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVN 40 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~ 40 (61)
|++.|+--|..|....|+=.+|-++|+.++-+.|++.|+.
T Consensus 1 lle~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 1 LLEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred CcccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 6889999999999999999999999999999999988764
No 117
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=71.19 E-value=1.1 Score=30.51 Aligned_cols=32 Identities=16% Similarity=0.317 Sum_probs=24.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPA 35 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll 35 (61)
||+.|+|+..+|..|+||..++. +.++-...+
T Consensus 449 ~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F~ 480 (591)
T KOG2505|consen 449 FLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIFI 480 (591)
T ss_pred HHHhcCCchhcccCCCCcccccc---cHHHHHHHH
Confidence 47889999999999999999876 444433333
No 118
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=69.89 E-value=6.5 Score=19.49 Aligned_cols=22 Identities=5% Similarity=0.238 Sum_probs=18.7
Q ss_pred cHHHHHHHcCCHHHHHHHHhCC
Q 035417 17 TPIDVAKLNSQHDMLKLPATLH 38 (61)
Q Consensus 17 tpl~~A~~~~~~~~v~~Ll~~~ 38 (61)
.-+..|+.+|+.++++.+++.+
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~ 29 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN 29 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh
Confidence 4578899999999999998765
No 119
>COG3970 Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only]
Probab=46.48 E-value=4.8 Score=26.06 Aligned_cols=23 Identities=17% Similarity=0.469 Sum_probs=18.2
Q ss_pred CCCccccCCCCCcHHHHHHHcCC
Q 035417 5 GSAVTLQNMDRKTPIDVAKLNSQ 27 (61)
Q Consensus 5 ga~~~~~d~~g~tpl~~A~~~~~ 27 (61)
|-|+|.+|.+|++||.+...+.+
T Consensus 218 gnDVnlRD~EgrsaLlL~kaKdn 240 (379)
T COG3970 218 GNDVNLRDFEGRSALLLSKAKDN 240 (379)
T ss_pred cCcccccccccccchhccccccc
Confidence 55899999999999988654433
No 120
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=43.70 E-value=24 Score=21.17 Aligned_cols=24 Identities=8% Similarity=-0.061 Sum_probs=17.8
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCC
Q 035417 19 IDVAKLNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 19 l~~A~~~~~~~~v~~Ll~~~~~~~ 42 (61)
|.+|+..|-...+.-.+++|.+.+
T Consensus 147 l~~a~~kgll~F~letlkygg~~~ 170 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVD 170 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCccc
Confidence 557777888877777777777655
No 121
>COG0223 Fmt Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]
Probab=33.78 E-value=26 Score=22.41 Aligned_cols=23 Identities=22% Similarity=0.148 Sum_probs=18.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHH
Q 035417 12 NMDRKTPIDVAKLNSQHDMLKLP 34 (61)
Q Consensus 12 d~~g~tpl~~A~~~~~~~~v~~L 34 (61)
-..|..|++||..+|..++---+
T Consensus 114 r~RGaAPIq~aI~~Gd~~TGvTi 136 (307)
T COG0223 114 RYRGAAPIQWAILNGDTETGVTI 136 (307)
T ss_pred cccCccHHHHHHHcCCcccceEE
Confidence 46899999999999987754333
No 122
>PF09722 DUF2384: Protein of unknown function (DUF2384); InterPro: IPR024467 This domain is found predominantly in proteobacterial proteins. Its function in unknown.
Probab=31.24 E-value=51 Score=15.02 Aligned_cols=23 Identities=13% Similarity=0.352 Sum_probs=15.2
Q ss_pred CCCCCcHHHHHH-HcCCHHHHHHH
Q 035417 12 NMDRKTPIDVAK-LNSQHDMLKLP 34 (61)
Q Consensus 12 d~~g~tpl~~A~-~~~~~~~v~~L 34 (61)
-..|+||+.... ..|...+.++|
T Consensus 24 ~l~g~~Plel~~t~~G~~~V~~~L 47 (54)
T PF09722_consen 24 ALGGRTPLELLRTEAGAERVLDYL 47 (54)
T ss_pred HhCCCCHHHHHcChHHHHHHHHHH
Confidence 357899999877 34445555555
No 123
>PF12514 DUF3718: Protein of unknown function (DUF3718); InterPro: IPR022193 This entry is represented by Bacteriophage Aaphi23, Orf19. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This domain family is found in bacteria and viruses, and is approximately 70 amino acids in length. There is a single completely conserved residue C that may be functionally important.
Probab=28.99 E-value=83 Score=15.50 Aligned_cols=23 Identities=4% Similarity=0.011 Sum_probs=20.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHH
Q 035417 12 NMDRKTPIDVAKLNSQHDMLKLP 34 (61)
Q Consensus 12 d~~g~tpl~~A~~~~~~~~v~~L 34 (61)
-.+|.+.+.+|..+|-.++.++|
T Consensus 32 ~CNG~sl~~FA~~~~A~kt~~~l 54 (68)
T PF12514_consen 32 VCNGESLLRFAASYGANKTAEFL 54 (68)
T ss_pred eECCcCHHHHHHHcCHHHHHHHH
Confidence 35799999999999999999998
No 124
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=28.81 E-value=13 Score=26.57 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=33.9
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 4 NGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 4 ~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
.+...+..+.+|++|+|.++..+...+...++.+.+++++.+
T Consensus 598 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~f~~ 639 (727)
T KOG0498|consen 598 AGILASRFAANGRPPLHTAASRGSSDCALLLLQKPADPDFSD 639 (727)
T ss_pred cccccccccccCCCccccccccCccccccccCCCCCCCCccc
Confidence 344556678899999999988888888888888888888775
No 125
>PF10273 WGG: Pre-rRNA-processing protein TSR2; InterPro: IPR019398 The pre-rRNA-processing protein TSR2 is required for 20S pre-rRNA processing []. This family contains a distinctive WGG motif.
Probab=21.81 E-value=69 Score=16.29 Aligned_cols=13 Identities=31% Similarity=0.355 Sum_probs=10.8
Q ss_pred CCCcHHHHHHHcC
Q 035417 14 DRKTPIDVAKLNS 26 (61)
Q Consensus 14 ~g~tpl~~A~~~~ 26 (61)
..||+|..|+.++
T Consensus 11 ~~WtaL~lAVen~ 23 (82)
T PF10273_consen 11 NRWTALQLAVENG 23 (82)
T ss_pred hcCHHHHHHHHhc
Confidence 5789999999865
No 126
>PF04964 Flp_Fap: Flp/Fap pilin component; InterPro: IPR007047 This entry is for the fimbriae associated protein Flp/Fap pilin component.
Probab=21.19 E-value=70 Score=14.44 Aligned_cols=16 Identities=25% Similarity=0.318 Sum_probs=12.1
Q ss_pred ccCCCCCcHHHHHHHc
Q 035417 10 LQNMDRKTPIDVAKLN 25 (61)
Q Consensus 10 ~~d~~g~tpl~~A~~~ 25 (61)
.+|++|-|++-||..-
T Consensus 2 ~~de~GaTaiEYali~ 17 (46)
T PF04964_consen 2 LRDERGATAIEYALIA 17 (46)
T ss_pred CcccccchHHHHHHHH
Confidence 4688999998887543
No 127
>TIGR02293 TAS_TIGR02293 putative toxin-antitoxin system antitoxin component, TIGR02293 family. Proteins in this family are found almost exclusively in the Proteobacteria, but also in Gloeobacter violaceus PCC 7421, a cyanobacterium. This family was proposed by Makarova, et al. (2009) to be the antitoxin component of a new class of type 2 toxin-antitoxin system, or addiction module.
Probab=21.10 E-value=94 Score=17.08 Aligned_cols=23 Identities=17% Similarity=0.260 Sum_probs=15.8
Q ss_pred CCCCCcHHHHH-HHcCCHHHHHHH
Q 035417 12 NMDRKTPIDVA-KLNSQHDMLKLP 34 (61)
Q Consensus 12 d~~g~tpl~~A-~~~~~~~~v~~L 34 (61)
...|+||+... ...|-..+.++|
T Consensus 101 ~lgg~~Pldll~t~~G~~~V~~~L 124 (133)
T TIGR02293 101 GLGNRRPIDLLLTEAGAEIVEDLL 124 (133)
T ss_pred hhCCCCHHHHHcCHHHHHHHHHHH
Confidence 45789999986 445655666665
Done!