Query 035417
Match_columns 61
No_of_seqs 145 out of 1131
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 03:58:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.4 1.6E-13 5.5E-18 77.2 4.5 46 1-46 89-134 (169)
2 1n0q_A 3ANK, 3 ankyrin repeats 99.4 2.1E-13 7.2E-18 69.3 4.5 47 1-47 21-67 (93)
3 4gpm_A Engineered protein OR26 99.3 1.1E-12 3.7E-17 73.8 4.5 47 1-47 56-102 (169)
4 4b93_B Ankyrin repeat domain-c 99.3 1.7E-12 5.8E-17 77.0 5.0 49 1-49 171-219 (269)
5 3aaa_C Myotrophin, protein V-1 99.3 1.8E-12 6.1E-17 68.5 4.5 45 2-46 60-104 (123)
6 2zgd_A 3 repeat synthetic anky 99.3 3.3E-12 1.1E-16 66.8 4.5 47 1-47 43-89 (110)
7 3t8k_A Uncharacterized protein 99.3 2.9E-12 9.8E-17 72.9 4.4 49 1-49 61-115 (186)
8 1dcq_A PYK2-associated protein 99.3 2.2E-12 7.5E-17 77.0 3.9 48 1-48 191-238 (278)
9 3aaa_C Myotrophin, protein V-1 99.2 8E-12 2.7E-16 65.9 4.4 47 1-47 26-72 (123)
10 1d9s_A Cyclin-dependent kinase 99.2 6.1E-12 2.1E-16 67.5 3.4 47 1-47 63-110 (136)
11 1n0q_A 3ANK, 3 ankyrin repeats 99.2 1E-11 3.5E-16 62.9 4.1 40 1-40 54-93 (93)
12 3c5r_A BARD-1, BRCA1-associate 99.2 9.4E-12 3.2E-16 66.6 4.0 43 3-45 64-106 (137)
13 2jab_A H10-2-G3; HER2, darpin, 99.2 1.1E-11 3.9E-16 66.4 4.3 43 2-44 67-109 (136)
14 3lvq_E ARF-GAP with SH3 domain 99.2 4.9E-12 1.7E-16 80.2 3.0 48 1-48 193-240 (497)
15 4g8k_A 2-5A-dependent ribonucl 99.2 9.4E-12 3.2E-16 74.6 3.9 46 1-46 44-90 (337)
16 1bd8_A P19INK4D CDK4/6 inhibit 99.2 1.6E-11 5.6E-16 66.5 4.5 46 1-46 54-99 (156)
17 1bi7_B P16INK4A, MTS1, multipl 99.2 1.2E-11 4E-16 67.7 3.9 46 1-46 63-109 (156)
18 1awc_B Protein (GA binding pro 99.2 2E-11 6.7E-16 66.4 4.7 44 2-45 87-130 (153)
19 1sw6_A Regulatory protein SWI6 99.2 2.8E-11 9.6E-16 73.1 5.8 47 1-47 116-163 (327)
20 3twr_A Tankyrase-2; ankyrin re 99.2 2.3E-11 8E-16 66.5 4.9 45 2-46 95-139 (165)
21 4b93_B Ankyrin repeat domain-c 99.2 9.1E-12 3.1E-16 73.9 3.4 55 1-55 138-196 (269)
22 1oy3_D Transcription factor in 99.2 1.4E-11 4.7E-16 71.6 4.0 47 1-47 211-257 (282)
23 3f6q_A Integrin-linked protein 99.2 2.6E-11 9E-16 67.3 5.0 45 2-46 92-136 (179)
24 1s70_B 130 kDa myosin-binding 99.2 2.3E-11 8E-16 71.5 5.1 50 1-50 218-267 (299)
25 2b0o_E UPLC1; arfgap, structur 99.2 1.3E-11 4.3E-16 74.5 3.9 48 1-48 212-259 (301)
26 2l6b_A NR1C; ankyrin, consensu 99.2 1.2E-11 4.2E-16 64.4 3.4 45 1-45 28-72 (115)
27 2jab_A H10-2-G3; HER2, darpin, 99.2 2.1E-11 7E-16 65.4 4.3 47 1-47 33-79 (136)
28 3c5r_A BARD-1, BRCA1-associate 99.2 2.8E-11 9.6E-16 64.7 4.6 46 1-46 29-74 (137)
29 3deo_A Signal recognition part 99.2 1.8E-11 6.2E-16 68.5 3.7 44 2-45 96-140 (183)
30 1ycs_B 53BP2, P53BP2; ankyrin 99.2 2.1E-11 7.1E-16 70.7 4.0 44 2-45 90-133 (239)
31 1ycs_B 53BP2, P53BP2; ankyrin 99.2 2E-11 6.8E-16 70.8 3.9 47 1-47 56-102 (239)
32 4hbd_A KN motif and ankyrin re 99.2 2.2E-11 7.7E-16 72.1 4.2 48 1-48 202-250 (276)
33 4g8k_A 2-5A-dependent ribonucl 99.2 1.2E-11 4.2E-16 74.1 3.0 51 4-55 262-312 (337)
34 2l6b_A NR1C; ankyrin, consensu 99.2 9.9E-12 3.4E-16 64.8 2.2 48 1-48 61-108 (115)
35 3v30_A DNA-binding protein rfx 99.2 3.9E-11 1.3E-15 66.0 4.7 46 1-46 88-133 (172)
36 3twr_A Tankyrase-2; ankyrin re 99.2 3.7E-11 1.3E-15 65.8 4.5 46 1-46 61-106 (165)
37 3ui2_A Signal recognition part 99.2 3.3E-11 1.1E-15 70.3 4.5 44 2-45 97-141 (244)
38 1k1a_A B-cell lymphoma 3-encod 99.1 4.7E-11 1.6E-15 68.1 4.7 48 1-48 169-216 (241)
39 2vge_A RELA-associated inhibit 99.1 2.9E-11 9.7E-16 70.3 3.8 45 1-45 73-117 (229)
40 3utm_A Tankyrase-1; tankyrase, 99.1 3.5E-11 1.2E-15 71.5 4.3 48 1-48 266-313 (351)
41 3f6q_A Integrin-linked protein 99.1 5.1E-11 1.7E-15 66.1 4.5 46 1-46 58-103 (179)
42 3ehr_A Osteoclast-stimulating 99.1 3.7E-11 1.3E-15 68.6 4.0 45 2-46 126-171 (222)
43 1bi7_B P16INK4A, MTS1, multipl 99.1 1.6E-11 5.6E-16 67.0 2.4 49 1-49 97-145 (156)
44 2rfm_A Putative ankyrin repeat 99.1 5.3E-11 1.8E-15 66.6 4.5 45 1-45 120-164 (192)
45 1awc_B Protein (GA binding pro 99.1 5.9E-11 2E-15 64.4 4.5 46 1-46 53-98 (153)
46 2vge_A RELA-associated inhibit 99.1 6.3E-11 2.2E-15 68.8 4.8 47 1-47 40-86 (229)
47 3deo_A Signal recognition part 99.1 2.5E-11 8.4E-16 67.9 2.7 54 1-55 63-121 (183)
48 1ikn_D Protein (I-kappa-B-alph 99.1 6.5E-11 2.2E-15 67.9 4.3 47 1-47 136-183 (236)
49 2y1l_E Darpin-8.4; hydrolase-i 99.1 8E-11 2.7E-15 64.9 4.5 44 2-45 100-143 (169)
50 3v31_A Ankyrin repeat family A 99.1 5.9E-11 2E-15 65.0 3.9 44 2-45 89-132 (167)
51 1n0r_A 4ANK, 4 ankyrin repeats 99.1 9.3E-11 3.2E-15 61.1 4.5 44 2-45 55-98 (126)
52 1ihb_A P18-INK4C(INK6), cyclin 99.1 7.6E-11 2.6E-15 64.1 4.3 42 3-44 58-99 (162)
53 1yyh_A HN1;, notch 1, ankyrin 99.1 7.2E-11 2.5E-15 68.6 4.3 44 2-45 177-220 (253)
54 3ui2_A Signal recognition part 99.1 1.6E-10 5.3E-15 67.4 5.3 44 1-45 64-107 (244)
55 3aji_A 26S proteasome non-ATPa 99.1 1.1E-10 3.8E-15 66.4 4.5 47 1-47 158-204 (231)
56 3ehr_A Osteoclast-stimulating 99.1 9E-11 3.1E-15 67.0 4.1 47 1-47 92-139 (222)
57 1bd8_A P19INK4D CDK4/6 inhibit 99.1 9.8E-11 3.4E-15 63.4 4.0 46 1-47 87-132 (156)
58 1ihb_A P18-INK4C(INK6), cyclin 99.1 8.5E-11 2.9E-15 63.9 3.8 45 1-45 89-134 (162)
59 1s70_B 130 kDa myosin-binding 99.1 1.1E-10 3.7E-15 68.6 4.1 44 2-45 60-103 (299)
60 1n11_A Ankyrin; clathrin, BAND 99.1 1.3E-10 4.4E-15 71.6 4.5 46 1-46 330-375 (437)
61 2y1l_E Darpin-8.4; hydrolase-i 99.1 1.6E-10 5.5E-15 63.7 4.5 43 2-44 34-76 (169)
62 3jue_A Arfgap with coiled-coil 99.1 1.1E-10 3.9E-15 72.4 4.3 46 1-46 254-299 (368)
63 1yyh_A HN1;, notch 1, ankyrin 99.1 1.4E-10 4.9E-15 67.3 4.4 47 1-47 143-189 (253)
64 3v30_A DNA-binding protein rfx 99.1 1.3E-10 4.5E-15 63.9 3.9 45 1-45 55-99 (172)
65 3jxi_A Vanilloid receptor-rela 99.1 1.8E-10 6E-15 66.8 4.5 47 1-47 112-175 (260)
66 2xai_A ASB-9, ankyrin repeat a 99.1 1.6E-10 5.4E-15 67.5 4.3 46 1-46 22-67 (261)
67 2f8y_A Notch homolog 1, transl 99.1 1.7E-10 5.8E-15 65.3 4.3 44 2-45 145-188 (223)
68 1oy3_D Transcription factor in 99.1 1.3E-10 4.6E-15 67.4 3.9 47 1-47 177-224 (282)
69 3b7b_A Euchromatic histone-lys 99.1 2.2E-10 7.4E-15 65.4 4.7 47 1-47 163-209 (237)
70 2etb_A Transient receptor pote 99.0 2.1E-10 7.3E-15 66.4 4.5 47 1-47 109-171 (256)
71 3utm_A Tankyrase-1; tankyrase, 99.0 2E-10 7E-15 68.1 4.5 47 1-47 233-279 (351)
72 2dzn_A Probable 26S proteasome 99.0 2.4E-10 8.1E-15 64.8 4.6 44 2-45 160-205 (228)
73 2rfm_A Putative ankyrin repeat 99.0 1.6E-10 5.5E-15 64.6 3.7 45 1-45 87-131 (192)
74 2dzn_A Probable 26S proteasome 99.0 2.6E-10 8.9E-15 64.6 4.5 45 1-45 126-171 (228)
75 2fo1_E LIN-12 protein; beta-ba 99.0 2.5E-10 8.4E-15 69.9 4.3 46 2-47 153-198 (373)
76 3d9h_A CDNA FLJ77766, highly s 99.0 3.1E-10 1E-14 67.3 4.5 47 1-47 78-124 (285)
77 2pnn_A Transient receptor pote 99.0 3E-10 1E-14 66.4 4.3 47 1-47 120-183 (273)
78 2f8y_A Notch homolog 1, transl 99.0 3.9E-10 1.3E-14 63.9 4.6 46 1-46 111-156 (223)
79 3v31_A Ankyrin repeat family A 99.0 2.4E-10 8.4E-15 62.5 3.6 41 3-43 57-97 (167)
80 3kea_A K1L; tropism, ANK repea 99.0 1.7E-10 5.9E-15 68.4 2.8 46 1-46 81-126 (285)
81 2rfa_A Transient receptor pote 99.0 4.5E-10 1.5E-14 64.0 4.3 46 1-46 94-152 (232)
82 1n0r_A 4ANK, 4 ankyrin repeats 99.0 3.9E-10 1.3E-14 58.6 3.7 46 1-46 21-66 (126)
83 1sw6_A Regulatory protein SWI6 99.0 3.3E-10 1.1E-14 68.4 3.8 45 7-51 275-319 (327)
84 2rfa_A Transient receptor pote 99.0 5E-10 1.7E-14 63.8 3.9 41 1-41 140-184 (232)
85 1wdy_A 2-5A-dependent ribonucl 99.0 4.4E-10 1.5E-14 64.9 3.6 46 1-46 205-251 (285)
86 1wdy_A 2-5A-dependent ribonucl 99.0 7E-10 2.4E-14 64.1 4.4 42 4-45 242-283 (285)
87 3lvq_E ARF-GAP with SH3 domain 99.0 5.4E-10 1.9E-14 70.8 4.0 45 1-45 226-270 (497)
88 1d9s_A Cyclin-dependent kinase 99.0 3E-09 1E-13 56.8 6.3 41 5-45 2-42 (136)
89 2fo1_E LIN-12 protein; beta-ba 98.9 5.7E-10 1.9E-14 68.3 3.7 47 1-47 298-345 (373)
90 3ljn_A Hypothetical protein; a 98.9 3E-10 1E-14 68.6 2.5 35 8-42 204-238 (364)
91 2xai_A ASB-9, ankyrin repeat a 98.9 6.1E-10 2.1E-14 65.0 3.6 44 2-46 154-197 (261)
92 3aji_A 26S proteasome non-ATPa 98.9 9.7E-10 3.3E-14 62.5 4.3 44 2-45 60-103 (231)
93 1k1a_A B-cell lymphoma 3-encod 98.9 1.2E-09 4.2E-14 62.2 4.7 46 1-46 135-181 (241)
94 3hra_A Ankyrin repeat family p 98.9 8.7E-10 3E-14 61.5 3.9 45 2-46 126-176 (201)
95 3hra_A Ankyrin repeat family p 98.9 1.3E-09 4.5E-14 60.8 4.5 40 6-45 30-69 (201)
96 1n11_A Ankyrin; clathrin, BAND 98.9 6.1E-10 2.1E-14 68.5 3.2 46 1-46 297-342 (437)
97 3t8k_A Uncharacterized protein 98.9 6.6E-11 2.3E-15 67.2 -1.1 48 1-48 100-154 (186)
98 4hbd_A KN motif and ankyrin re 98.9 9.8E-10 3.4E-14 65.0 3.9 47 2-48 170-216 (276)
99 3b7b_A Euchromatic histone-lys 98.9 1.2E-09 4.2E-14 62.2 4.2 45 1-45 130-174 (237)
100 3jue_A Arfgap with coiled-coil 98.9 1.3E-09 4.3E-14 67.7 4.5 54 1-54 219-278 (368)
101 3ljn_A Hypothetical protein; a 98.9 8.3E-10 2.9E-14 66.7 3.5 55 1-55 159-222 (364)
102 3d9h_A CDNA FLJ77766, highly s 98.9 1.9E-09 6.4E-14 63.8 4.4 43 2-45 210-252 (285)
103 2etb_A Transient receptor pote 98.9 3.9E-10 1.3E-14 65.3 1.0 38 4-41 161-207 (256)
104 1dcq_A PYK2-associated protein 98.9 1.4E-09 4.8E-14 64.8 3.3 41 1-41 224-264 (278)
105 2b0o_E UPLC1; arfgap, structur 98.9 5.4E-10 1.8E-14 67.3 1.3 53 1-55 245-297 (301)
106 3eu9_A Huntingtin-interacting 98.8 3.4E-09 1.2E-13 60.0 3.7 47 1-47 162-209 (240)
107 1ikn_D Protein (I-kappa-B-alph 98.8 7.6E-09 2.6E-13 59.2 5.1 40 1-40 64-103 (236)
108 3eu9_A Huntingtin-interacting 98.8 6.8E-09 2.3E-13 58.7 4.5 45 1-45 95-139 (240)
109 3jxi_A Vanilloid receptor-rela 98.8 9.4E-10 3.2E-14 63.7 0.8 38 4-41 165-211 (260)
110 3kea_A K1L; tropism, ANK repea 98.8 8.8E-10 3E-14 65.4 0.3 45 1-45 180-225 (285)
111 2pnn_A Transient receptor pote 98.7 2E-09 6.9E-14 62.8 1.0 42 1-42 167-220 (273)
112 2zgd_A 3 repeat synthetic anky 98.7 9.8E-09 3.3E-13 53.3 3.1 34 1-34 76-109 (110)
113 2aja_A Ankyrin repeat family p 98.4 4.9E-09 1.7E-13 65.2 -3.8 27 16-42 164-190 (376)
114 2aja_A Ankyrin repeat family p 98.2 4.3E-08 1.5E-12 60.9 -2.4 28 12-39 125-152 (376)
115 1gp8_A Protein (scaffolding pr 55.8 12 0.0004 16.2 2.2 18 19-36 17-34 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.42 E-value=1.6e-13 Score=77.16 Aligned_cols=46 Identities=20% Similarity=0.331 Sum_probs=30.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|+++|.+|.+|+||||+|+..|+.+++++|+++|++.+.++.
T Consensus 89 Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~ 134 (169)
T 4gpm_A 89 LISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDS 134 (169)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 3566677777777777777777777777777777777666665543
No 2
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.42 E-value=2.1e-13 Score=69.28 Aligned_cols=47 Identities=19% Similarity=0.327 Sum_probs=43.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+.++..
T Consensus 21 Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 67 (93)
T 1n0q_A 21 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN 67 (93)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence 46889999999999999999999999999999999999998877643
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.34 E-value=1.1e-12 Score=73.76 Aligned_cols=47 Identities=19% Similarity=0.324 Sum_probs=38.4
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|.+|+||||+|+..|+.+++++|+++|++++.++..
T Consensus 56 ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~ 102 (169)
T 4gpm_A 56 LISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD 102 (169)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCC
Confidence 45678888888888888888888888888888888888887776543
No 4
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.33 E-value=1.7e-12 Score=77.01 Aligned_cols=49 Identities=12% Similarity=0.133 Sum_probs=41.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRH 49 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 49 (61)
|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.++..+.
T Consensus 171 Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~ 219 (269)
T 4b93_B 171 LLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQR 219 (269)
T ss_dssp HHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred HHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 5678999999999999999999999999999999999998887765543
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.32 E-value=1.8e-12 Score=68.46 Aligned_cols=45 Identities=16% Similarity=0.179 Sum_probs=26.5
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++.
T Consensus 60 l~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 104 (123)
T 3aaa_C 60 LLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGP 104 (123)
T ss_dssp HTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 455566666666666666666666666666666666655554443
No 6
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.30 E-value=3.3e-12 Score=66.75 Aligned_cols=47 Identities=19% Similarity=0.347 Sum_probs=42.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++.+..+..
T Consensus 43 Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 89 (110)
T 2zgd_A 43 LMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKF 89 (110)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccC
Confidence 46789999999999999999999999999999999999998877644
No 7
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.29 E-value=2.9e-12 Score=72.85 Aligned_cols=49 Identities=6% Similarity=-0.056 Sum_probs=43.3
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCC------HHHHHHHHhCCCCCCccccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQ------HDMLKLPATLHVNDGFRQFYRH 49 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~------~~~v~~Ll~~~~~~~~~~~~~~ 49 (61)
||++|+++|.+|.+|+||||+|+..++ .+++++|+++|++++.++..+.
T Consensus 61 Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ 115 (186)
T 3t8k_A 61 LINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115 (186)
T ss_dssp HHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred HHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence 578999999999999999999999887 6889999999999988765443
No 8
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.29 E-value=2.2e-12 Score=77.01 Aligned_cols=48 Identities=15% Similarity=0.093 Sum_probs=43.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++.+.++..+
T Consensus 191 Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g 238 (278)
T 1dcq_A 191 LVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESG 238 (278)
T ss_dssp HHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCC
Confidence 567899999999999999999999999999999999999988776543
No 9
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.25 E-value=8e-12 Score=65.92 Aligned_cols=47 Identities=13% Similarity=0.069 Sum_probs=42.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+.++..
T Consensus 26 ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~ 72 (123)
T 3aaa_C 26 YVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH 72 (123)
T ss_dssp HHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred HHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC
Confidence 46789999999999999999999999999999999999998777643
No 10
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.23 E-value=6.1e-12 Score=67.47 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=41.0
Q ss_pred CccCCCCccccCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMD-RKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~-g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|.. |+||||+|+..++.+++++|+++|++.+.++..
T Consensus 63 Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 110 (136)
T 1d9s_A 63 LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAW 110 (136)
T ss_dssp HHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSS
T ss_pred HHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence 46788999999998 999999999999999999999999988777643
No 11
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.23 E-value=1e-11 Score=62.92 Aligned_cols=40 Identities=23% Similarity=0.403 Sum_probs=37.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVN 40 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~ 40 (61)
|+++|++++.+|.+|+||||+|+..++.+++++|++.|++
T Consensus 54 Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5688999999999999999999999999999999999874
No 12
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.23 E-value=9.4e-12 Score=66.58 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=21.6
Q ss_pred cCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 3 KNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 3 ~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
++|++++.+|..|+||||+|+..++.+++++|++.|++.+.++
T Consensus 64 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 106 (137)
T 3c5r_A 64 QHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVN 106 (137)
T ss_dssp HTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 4445555555555555555555555555555555555444443
No 13
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.23 E-value=1.1e-11 Score=66.40 Aligned_cols=43 Identities=19% Similarity=0.221 Sum_probs=22.5
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~ 44 (61)
+++|++++.+|..|+||||+|+..++.+++++|+++|++.+..
T Consensus 67 l~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 109 (136)
T 2jab_A 67 LKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQ 109 (136)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCc
Confidence 3445555555555555555555555555555555555544433
No 14
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.22 E-value=4.9e-12 Score=80.20 Aligned_cols=48 Identities=25% Similarity=0.227 Sum_probs=40.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
||++|+++|.+|.+|+||||+|+..|+.+++++|+++|++.+.++..+
T Consensus 193 Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 240 (497)
T 3lvq_E 193 IIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG 240 (497)
T ss_dssp HHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTC
T ss_pred HHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 467888898888899999999999999999999999988887776543
No 15
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.21 E-value=9.4e-12 Score=74.62 Aligned_cols=46 Identities=24% Similarity=0.302 Sum_probs=41.0
Q ss_pred CccCCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNM-DRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
||++|+++|.++. .|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 44 LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~ 90 (337)
T 4g8k_A 44 LLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKK 90 (337)
T ss_dssp HHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhcc
Confidence 5789999999875 599999999999999999999999998776654
No 16
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.21 E-value=1.6e-11 Score=66.54 Aligned_cols=46 Identities=20% Similarity=0.234 Sum_probs=36.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|++.|++.+.++.
T Consensus 54 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 99 (156)
T 1bd8_A 54 LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG 99 (156)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC
Confidence 4567888888888888888888888888888888888887766553
No 17
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.21 E-value=1.2e-11 Score=67.65 Aligned_cols=46 Identities=17% Similarity=0.127 Sum_probs=35.1
Q ss_pred CccCCCCccccCCCCCc-HHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKT-PIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~t-pl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+| |||+|+..++.+++++|+++|++.+.++.
T Consensus 63 Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 109 (156)
T 1bi7_B 63 LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDA 109 (156)
T ss_dssp HHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCC
Confidence 45677888888888887 88888888888888888888777766553
No 18
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.21 E-value=2e-11 Score=66.36 Aligned_cols=44 Identities=18% Similarity=0.273 Sum_probs=27.8
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++
T Consensus 87 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 130 (153)
T 1awc_B 87 LKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQS 130 (153)
T ss_dssp HTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC
Confidence 45566666666666666666666666666666666666655444
No 19
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.20 E-value=2.8e-11 Score=73.06 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=43.1
Q ss_pred CccCCCCccc-cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTL-QNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|++.|+++|. +|.+|+||||+|+..|+.+++++|+++|++++.++..
T Consensus 116 l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~ 163 (327)
T 1sw6_A 116 FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNM 163 (327)
T ss_dssp CTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTT
T ss_pred HHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 5678999999 8999999999999999999999999999998877644
No 20
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.20 E-value=2.3e-11 Score=66.55 Aligned_cols=45 Identities=18% Similarity=0.245 Sum_probs=27.3
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++.
T Consensus 95 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 95 VKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 455666666666666666666666666666666666665555543
No 21
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.20 E-value=9.1e-12 Score=73.87 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=46.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc----cccccccC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY----RHFSVLDE 55 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~----~~~~~~~~ 55 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++.. .|+|+..+
T Consensus 138 Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g 196 (269)
T 4b93_B 138 LLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEK 196 (269)
T ss_dssp HHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC
Confidence 46789999999999999999999999999999999999998877644 34544433
No 22
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.20 E-value=1.4e-11 Score=71.60 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=31.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++..
T Consensus 211 Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 257 (282)
T 1oy3_D 211 LLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGD 257 (282)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC--
T ss_pred HHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCc
Confidence 45667777777777777777777777777777777777776665543
No 23
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.20 E-value=2.6e-11 Score=67.28 Aligned_cols=45 Identities=11% Similarity=0.011 Sum_probs=26.4
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++.
T Consensus 92 l~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 136 (179)
T 3f6q_A 92 LQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNK 136 (179)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCT
T ss_pred HHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhcc
Confidence 455566666666666666666666666666666666655555443
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.20 E-value=2.3e-11 Score=71.45 Aligned_cols=50 Identities=10% Similarity=0.092 Sum_probs=44.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHF 50 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 50 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|++.|++.+.++..+..
T Consensus 218 Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t 267 (299)
T 1s70_B 218 LIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQT 267 (299)
T ss_dssp HHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 57899999999999999999999999999999999999998887755443
No 25
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.19 E-value=1.3e-11 Score=74.47 Aligned_cols=48 Identities=25% Similarity=0.227 Sum_probs=43.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|+++|++++.+|.+|+||||+|+..|+.+++++|+++|++.+.++..+
T Consensus 212 Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G 259 (301)
T 2b0o_E 212 IIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG 259 (301)
T ss_dssp HHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTS
T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 467899999999999999999999999999999999999988776543
No 26
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.19 E-value=1.2e-11 Score=64.42 Aligned_cols=45 Identities=24% Similarity=0.395 Sum_probs=34.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+..+
T Consensus 28 Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d 72 (115)
T 2l6b_A 28 LLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72 (115)
T ss_dssp HTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCC
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccC
Confidence 456777787778888888888888888888888888777766554
No 27
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.19 E-value=2.1e-11 Score=65.37 Aligned_cols=47 Identities=13% Similarity=0.176 Sum_probs=42.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+..+..
T Consensus 33 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~ 79 (136)
T 2jab_A 33 LMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAI 79 (136)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC
Confidence 46889999999999999999999999999999999999988766543
No 28
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.19 E-value=2.8e-11 Score=64.71 Aligned_cols=46 Identities=17% Similarity=0.206 Sum_probs=41.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+..+.
T Consensus 29 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 74 (137)
T 3c5r_A 29 LLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGY 74 (137)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCG
T ss_pred HHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCC
Confidence 4678999999999999999999999999999999999998776654
No 29
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.18 E-value=1.8e-11 Score=68.45 Aligned_cols=44 Identities=9% Similarity=0.114 Sum_probs=21.3
Q ss_pred ccCCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQN-MDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d-~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+| ..|+||||+|+..++.+++++|+++|++.+.++
T Consensus 96 l~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d 140 (183)
T 3deo_A 96 AEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVED 140 (183)
T ss_dssp HHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred HHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCC
Confidence 34444554444 445555555555555555555555544444333
No 30
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.17 E-value=2.1e-11 Score=70.70 Aligned_cols=44 Identities=16% Similarity=0.064 Sum_probs=27.3
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+|..|+||||+|+..|+.+++++|+++|++.+..+
T Consensus 90 l~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 133 (239)
T 1ycs_B 90 VQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133 (239)
T ss_dssp HHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceec
Confidence 45566666666666666666666666666666666666655444
No 31
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.17 E-value=2e-11 Score=70.78 Aligned_cols=47 Identities=15% Similarity=0.120 Sum_probs=43.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|++.|++++.+|..|+||||+|+..|+.+++++|+++|++.+.++..
T Consensus 56 Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~ 102 (239)
T 1ycs_B 56 IIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSD 102 (239)
T ss_dssp HTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence 57889999999999999999999999999999999999998877644
No 32
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.17 E-value=2.2e-11 Score=72.07 Aligned_cols=48 Identities=15% Similarity=0.105 Sum_probs=40.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPAT-LHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~ 48 (61)
|+++|++++.+|.+|+||||+|+..|+.+++++|++ .|++.+.++..+
T Consensus 202 Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g 250 (276)
T 4hbd_A 202 LLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDG 250 (276)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTS
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCC
Confidence 467899999999999999999999999999999998 788877776443
No 33
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.17 E-value=1.2e-11 Score=74.11 Aligned_cols=51 Identities=10% Similarity=-0.029 Sum_probs=42.1
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccccccC
Q 035417 4 NGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVLDE 55 (61)
Q Consensus 4 ~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 55 (61)
.|++++.+|.+|+||||+|+..|+.+++++|+++|++++.++ ..++++..+
T Consensus 262 ~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~-~L~~A~~~~ 312 (337)
T 4g8k_A 262 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD-LVMTARRNY 312 (337)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC-HHHHHHHTT
T ss_pred cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-HHHHHHHcC
Confidence 478999999999999999999999999999999999888765 455554433
No 34
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.17 E-value=9.9e-12 Score=64.80 Aligned_cols=48 Identities=27% Similarity=0.403 Sum_probs=43.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|+++|++++.+|..|+|||++|+..++.+++++|+++|++.+..+..+
T Consensus 61 Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~ 108 (115)
T 2l6b_A 61 LLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGS 108 (115)
T ss_dssp HTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCC
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccc
Confidence 578899999999999999999999999999999999999988776443
No 35
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.17 E-value=3.9e-11 Score=66.01 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=31.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+.++.
T Consensus 88 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 133 (172)
T 3v30_A 88 LLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133 (172)
T ss_dssp HHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 3466677777777777777777777777777777777766655543
No 36
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.16 E-value=3.7e-11 Score=65.75 Aligned_cols=46 Identities=13% Similarity=0.168 Sum_probs=40.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+..+.
T Consensus 61 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 106 (165)
T 3twr_A 61 LLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADL 106 (165)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCC
Confidence 4678899999999999999999999999999999999988776653
No 37
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.16 E-value=3.3e-11 Score=70.27 Aligned_cols=44 Identities=9% Similarity=0.114 Sum_probs=21.3
Q ss_pred ccCCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQN-MDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d-~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+| ..|+||||+|+..|+.+++++|+++|++.+.++
T Consensus 97 l~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d 141 (244)
T 3ui2_A 97 AEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVED 141 (244)
T ss_dssp HHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 34445554444 445555555555555555555555554444333
No 38
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.15 E-value=4.7e-11 Score=68.09 Aligned_cols=48 Identities=10% Similarity=0.169 Sum_probs=39.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++..+
T Consensus 169 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 216 (241)
T 1k1a_A 169 LLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHN 216 (241)
T ss_dssp HHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCC
Confidence 467788888888888888888888888888888888888877766443
No 39
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.15 E-value=2.9e-11 Score=70.25 Aligned_cols=45 Identities=11% Similarity=0.020 Sum_probs=30.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|++.|++.+..+
T Consensus 73 Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 73 LITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117 (229)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 355666777677777777777777777777777777766655543
No 40
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.15 E-value=3.5e-11 Score=71.45 Aligned_cols=48 Identities=13% Similarity=0.139 Sum_probs=30.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++++..+..+
T Consensus 266 Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g 313 (351)
T 3utm_A 266 LHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQG 313 (351)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCC
Confidence 345666666666666666666666666666666666666666555443
No 41
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.14 E-value=5.1e-11 Score=66.12 Aligned_cols=46 Identities=13% Similarity=0.246 Sum_probs=36.7
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+..+.
T Consensus 58 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 103 (179)
T 3f6q_A 58 LIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNE 103 (179)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 4567888888888888888888888888888888888887766653
No 42
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.14 E-value=3.7e-11 Score=68.61 Aligned_cols=45 Identities=16% Similarity=0.193 Sum_probs=27.2
Q ss_pred ccC-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 2 LKN-GSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 2 l~~-ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
+++ |++++.+|..|+||||+|+..|+.+++++|+++|++.+.++.
T Consensus 126 l~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 171 (222)
T 3ehr_A 126 FTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNI 171 (222)
T ss_dssp TTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCT
T ss_pred HcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC
Confidence 344 566666666666666666666666666666666666555543
No 43
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.14 E-value=1.6e-11 Score=67.05 Aligned_cols=49 Identities=12% Similarity=0.169 Sum_probs=36.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRH 49 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 49 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++..+.
T Consensus 97 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 145 (156)
T 1bi7_B 97 LHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARI 145 (156)
T ss_dssp HHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcC
Confidence 5678999999999999999999999999999999999999887765443
No 44
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.14 E-value=5.3e-11 Score=66.55 Aligned_cols=45 Identities=24% Similarity=0.372 Sum_probs=32.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+.++
T Consensus 120 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 164 (192)
T 2rfm_A 120 LLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARD 164 (192)
T ss_dssp HHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 356677777777777777777777777777777777777766554
No 45
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.13 E-value=5.9e-11 Score=64.43 Aligned_cols=46 Identities=11% Similarity=0.254 Sum_probs=40.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++.+..+.
T Consensus 53 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 98 (153)
T 1awc_B 53 LLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM 98 (153)
T ss_dssp HHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCC
Confidence 4678899999999999999999999999999999999988776654
No 46
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.13 E-value=6.3e-11 Score=68.78 Aligned_cols=47 Identities=13% Similarity=0.016 Sum_probs=42.7
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|++.|++.+.++..
T Consensus 40 Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~ 86 (229)
T 2vge_A 40 AVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSH 86 (229)
T ss_dssp HHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 46789999999999999999999999999999999999998877643
No 47
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.13 E-value=2.5e-11 Score=67.91 Aligned_cols=54 Identities=13% Similarity=0.063 Sum_probs=44.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc-----cccccccccC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ-----FYRHFSVLDE 55 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~-----~~~~~~~~~~ 55 (61)
|++ |++++.+|..|+||||+|+..|+.+++++|+++|++.+.++ .+.|+++..+
T Consensus 63 Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 63 LLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred HHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence 356 89999999999999999999999999999999999987665 2345555443
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.12 E-value=6.5e-11 Score=67.90 Aligned_cols=47 Identities=15% Similarity=0.167 Sum_probs=41.2
Q ss_pred CccCCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNM-DRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.++. .|+||||+|+..++.+++++|+++|++.+.++..
T Consensus 136 Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 183 (236)
T 1ikn_D 136 LVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ 183 (236)
T ss_dssp HHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTT
T ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCC
Confidence 4678999999987 9999999999999999999999999988777643
No 49
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.12 E-value=8e-11 Score=64.91 Aligned_cols=44 Identities=20% Similarity=0.374 Sum_probs=24.2
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++
T Consensus 100 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 143 (169)
T 2y1l_E 100 LKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQD 143 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 34555555555555555555555555555555555555544443
No 50
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.11 E-value=5.9e-11 Score=65.02 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=28.7
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++
T Consensus 89 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 132 (167)
T 3v31_A 89 LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIET 132 (167)
T ss_dssp HHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 45566666666666666666666666666666666666655544
No 51
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.11 E-value=9.3e-11 Score=61.05 Aligned_cols=44 Identities=20% Similarity=0.363 Sum_probs=31.1
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++
T Consensus 55 l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 98 (126)
T 1n0r_A 55 LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 98 (126)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccC
Confidence 45677777777777777777777777777777777777665554
No 52
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.11 E-value=7.6e-11 Score=64.12 Aligned_cols=42 Identities=14% Similarity=0.084 Sum_probs=20.9
Q ss_pred cCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q 035417 3 KNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 3 ~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~ 44 (61)
++|++++.+|..|+||||+|+..++.+++++|+++|++.+.+
T Consensus 58 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 99 (162)
T 1ihb_A 58 LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIE 99 (162)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 444555555555555555555555555555555555444433
No 53
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.11 E-value=7.2e-11 Score=68.60 Aligned_cols=44 Identities=25% Similarity=0.306 Sum_probs=25.8
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++
T Consensus 177 l~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d 220 (253)
T 1yyh_A 177 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 220 (253)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccc
Confidence 45556666666666666666666666666666666665555443
No 54
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.10 E-value=1.6e-10 Score=67.41 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=40.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|++ |++++.+|..|+||||+|+..|+.+++++|+++|++.+.++
T Consensus 64 Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 107 (244)
T 3ui2_A 64 LLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRD 107 (244)
T ss_dssp TTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCC
Confidence 466 89999999999999999999999999999999999987766
No 55
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.09 E-value=1.1e-10 Score=66.43 Aligned_cols=47 Identities=15% Similarity=0.115 Sum_probs=35.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++..
T Consensus 158 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 204 (231)
T 3aji_A 158 LLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKE 204 (231)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred HHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Confidence 35677777777788888888888888888888888887777666543
No 56
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.09 E-value=9e-11 Score=66.98 Aligned_cols=47 Identities=15% Similarity=0.081 Sum_probs=42.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATL-HVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~ 47 (61)
|++.|++++.+|..|+||||+|+..|+.+++++|++. |++.+.++..
T Consensus 92 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~ 139 (222)
T 3ehr_A 92 CLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKL 139 (222)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTT
T ss_pred HHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCC
Confidence 4678999999999999999999999999999999998 8888777644
No 57
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.09 E-value=9.8e-11 Score=63.43 Aligned_cols=46 Identities=15% Similarity=0.206 Sum_probs=41.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|++. ++.+.++..
T Consensus 87 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~ 132 (156)
T 1bd8_A 87 LVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDAR 132 (156)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTT
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCC
Confidence 4688999999999999999999999999999999998 777766543
No 58
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.09 E-value=8.5e-11 Score=63.91 Aligned_cols=45 Identities=13% Similarity=0.331 Sum_probs=40.4
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-Cccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVND-GFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~-~~~~ 45 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++. +..+
T Consensus 89 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 134 (162)
T 1ihb_A 89 LLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRN 134 (162)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcC
Confidence 46889999999999999999999999999999999999873 5554
No 59
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.08 E-value=1.1e-10 Score=68.59 Aligned_cols=44 Identities=23% Similarity=0.296 Sum_probs=26.5
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+|..|+||||+|+..|+.+++++|++.|++.+..+
T Consensus 60 l~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 103 (299)
T 1s70_B 60 LERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPD 103 (299)
T ss_dssp HHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 45566666666666666666666666666666666666555443
No 60
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.07 E-value=1.3e-10 Score=71.58 Aligned_cols=46 Identities=13% Similarity=0.119 Sum_probs=37.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++.++.
T Consensus 330 Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~ 375 (437)
T 1n11_A 330 LLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS 375 (437)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCS
T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCC
Confidence 4677888888888888888888888888888888888888776653
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.07 E-value=1.6e-10 Score=63.67 Aligned_cols=43 Identities=16% Similarity=0.279 Sum_probs=24.4
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFR 44 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~ 44 (61)
+++|++++.+|..|+||||+|+..++.+++++|++.|++.+..
T Consensus 34 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 76 (169)
T 2y1l_E 34 MANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAV 76 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 4455555555555566666655555555555555555554443
No 62
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.07 E-value=1.1e-10 Score=72.41 Aligned_cols=46 Identities=20% Similarity=0.255 Sum_probs=32.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++.+..+.
T Consensus 254 LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~ 299 (368)
T 3jue_A 254 LLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDS 299 (368)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCC
Confidence 4566777777777777777777777777777777777777665543
No 63
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.07 E-value=1.4e-10 Score=67.33 Aligned_cols=47 Identities=11% Similarity=0.034 Sum_probs=41.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+.++..
T Consensus 143 Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 189 (253)
T 1yyh_A 143 LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR 189 (253)
T ss_dssp HHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 46789999999999999999999999999999999999988776543
No 64
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.06 E-value=1.3e-10 Score=63.89 Aligned_cols=45 Identities=16% Similarity=0.250 Sum_probs=33.4
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++
T Consensus 55 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 99 (172)
T 3v30_A 55 LLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYD 99 (172)
T ss_dssp HHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred HHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCC
Confidence 356677777777777777777777777777777777777766554
No 65
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.06 E-value=1.8e-10 Score=66.77 Aligned_cols=47 Identities=13% Similarity=0.166 Sum_probs=42.2
Q ss_pred CccCCCCccccC--------------CCCCcHHHHHHHcCCHHHHHHHHh---CCCCCCccccc
Q 035417 1 MLKNGSAVTLQN--------------MDRKTPIDVAKLNSQHDMLKLPAT---LHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d--------------~~g~tpl~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~ 47 (61)
|+++|++++.+| ..|+||||+|+..|+.+++++|++ .|++.+.++..
T Consensus 112 Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~ 175 (260)
T 3jxi_A 112 LVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSR 175 (260)
T ss_dssp HHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTT
T ss_pred HHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCC
Confidence 578899999988 689999999999999999999999 89998877654
No 66
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.06 E-value=1.6e-10 Score=67.49 Aligned_cols=46 Identities=17% Similarity=0.175 Sum_probs=34.4
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|.+|+||||+|+..|+.+++++|++.|++.+..+.
T Consensus 22 Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 67 (261)
T 2xai_A 22 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA 67 (261)
T ss_dssp HHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 3567777777777888888888888888888888887777665543
No 67
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.06 E-value=1.7e-10 Score=65.35 Aligned_cols=44 Identities=25% Similarity=0.306 Sum_probs=24.9
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+|..|.||||+|+..++.+++++|+++|++.+.++
T Consensus 145 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 188 (223)
T 2f8y_A 145 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 188 (223)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 34555555555555555555555555555555555555554443
No 68
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.06 E-value=1.3e-10 Score=67.39 Aligned_cols=47 Identities=15% Similarity=0.182 Sum_probs=39.2
Q ss_pred CccCCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNM-DRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.++. .|+||||+|+..++.+++++|+++|++.+.++..
T Consensus 177 Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 224 (282)
T 1oy3_D 177 LRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYG 224 (282)
T ss_dssp HHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Confidence 4678889988875 4999999999999999999999999988777543
No 69
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.06 E-value=2.2e-10 Score=65.42 Aligned_cols=47 Identities=13% Similarity=0.181 Sum_probs=34.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++..
T Consensus 163 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 209 (237)
T 3b7b_A 163 LLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKE 209 (237)
T ss_dssp HHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCC
Confidence 45677777777777777777777777777777777777776666543
No 70
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.05 E-value=2.1e-10 Score=66.39 Aligned_cols=47 Identities=17% Similarity=0.234 Sum_probs=42.1
Q ss_pred CccCCCCccccCCC-------------CCcHHHHHHHcCCHHHHHHHHh---CCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMD-------------RKTPIDVAKLNSQHDMLKLPAT---LHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~-------------g~tpl~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~ 47 (61)
|+++|++++.+|.. |+||||+|+..|+.+++++|++ .|++.+.++..
T Consensus 109 Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~ 171 (256)
T 2etb_A 109 LVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSL 171 (256)
T ss_dssp HHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTT
T ss_pred HHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCC
Confidence 56889999999876 9999999999999999999999 99998877644
No 71
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.05 E-value=2e-10 Score=68.11 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=42.9
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|..|+||||+|+..++.+++++|+++|++.+.++..
T Consensus 233 Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~ 279 (351)
T 3utm_A 233 LLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSL 279 (351)
T ss_dssp HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 46789999999999999999999999999999999999998877643
No 72
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.05 E-value=2.4e-10 Score=64.82 Aligned_cols=44 Identities=23% Similarity=0.124 Sum_probs=24.9
Q ss_pred ccCC-CCccccCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCCccc
Q 035417 2 LKNG-SAVTLQNMDRKTPIDVAKLNSQHDMLKLPA-TLHVNDGFRQ 45 (61)
Q Consensus 2 l~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll-~~~~~~~~~~ 45 (61)
+++| ++++.+|..|+||||+|+..++.+++++|+ +.|++.+.++
T Consensus 160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~ 205 (228)
T 2dzn_A 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205 (228)
T ss_dssp HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBC
T ss_pred HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccC
Confidence 3445 555555555666666665555556555555 5555555444
No 73
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.04 E-value=1.6e-10 Score=64.60 Aligned_cols=45 Identities=22% Similarity=0.235 Sum_probs=32.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+.++
T Consensus 87 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 131 (192)
T 2rfm_A 87 LLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRN 131 (192)
T ss_dssp HHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC
T ss_pred HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 345677777777777777777777777777777777777766554
No 74
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.04 E-value=2.6e-10 Score=64.65 Aligned_cols=45 Identities=16% Similarity=0.318 Sum_probs=32.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLH-VNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~-~~~~~~~ 45 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.| ++.+.++
T Consensus 126 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d 171 (228)
T 2dzn_A 126 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQD 171 (228)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCC
T ss_pred HHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcC
Confidence 35667777777777777777777777777777777777 6655544
No 75
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.02 E-value=2.5e-10 Score=69.86 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=41.6
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
++.|+++|.+|.+|+||||+|+..|+.+++++|++.|++.+..+..
T Consensus 153 l~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~ 198 (373)
T 2fo1_E 153 IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS 198 (373)
T ss_dssp HHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT
T ss_pred HhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCC
Confidence 4789999999999999999999999999999999999988776543
No 76
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.02 E-value=3.1e-10 Score=67.25 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=37.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|+++|++++.+|.+|+||||+|+..|+.+++++|++.|++.+.++..
T Consensus 78 Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 124 (285)
T 3d9h_A 78 LISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTAD 124 (285)
T ss_dssp HHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTT
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCC
Confidence 45678888888888888888888888888888888888877666533
No 77
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.02 E-value=3e-10 Score=66.39 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=42.1
Q ss_pred CccCCCCccccCC--------------CCCcHHHHHHHcCCHHHHHHHHh---CCCCCCccccc
Q 035417 1 MLKNGSAVTLQNM--------------DRKTPIDVAKLNSQHDMLKLPAT---LHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~--------------~g~tpl~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~ 47 (61)
|+++|++++.++. .|+||||+|+..|+.+++++|++ .|++.+.++..
T Consensus 120 Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~ 183 (273)
T 2pnn_A 120 LVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSV 183 (273)
T ss_dssp HHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTT
T ss_pred HHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCC
Confidence 5788999999887 89999999999999999999999 89998877643
No 78
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.01 E-value=3.9e-10 Score=63.86 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=39.1
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.|++.+.++.
T Consensus 111 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 156 (223)
T 2f8y_A 111 LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 156 (223)
T ss_dssp HHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 4678889998899999999999999999999999999888776653
No 79
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.01 E-value=2.4e-10 Score=62.53 Aligned_cols=41 Identities=20% Similarity=0.243 Sum_probs=19.6
Q ss_pred cCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q 035417 3 KNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGF 43 (61)
Q Consensus 3 ~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~ 43 (61)
++|++++.+|..|.||||+|+..++.+++++|++.|++.+.
T Consensus 57 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 97 (167)
T 3v31_A 57 QNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 97 (167)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence 34444444444444444444444444444444444444433
No 80
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.00 E-value=1.7e-10 Score=68.42 Aligned_cols=46 Identities=15% Similarity=-0.016 Sum_probs=37.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.+..+.
T Consensus 81 Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 126 (285)
T 3kea_A 81 LLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGK 126 (285)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSS
T ss_pred HHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCC
Confidence 4678888888888888888888888888888888888887766543
No 81
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.99 E-value=4.5e-10 Score=64.02 Aligned_cols=46 Identities=13% Similarity=0.213 Sum_probs=35.9
Q ss_pred CccCCCCccccCC-------------CCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNM-------------DRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~-------------~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.++. .|+||||+|+..|+.+++++|+++|++.+.++.
T Consensus 94 Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 152 (232)
T 2rfa_A 94 LLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDS 152 (232)
T ss_dssp HHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 4567777777654 788888888888888888888888888776653
No 82
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=98.99 E-value=3.9e-10 Score=58.65 Aligned_cols=46 Identities=20% Similarity=0.344 Sum_probs=41.5
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|.||||+|+..++.+++++|++.|++.+.++.
T Consensus 21 Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 66 (126)
T 1n0r_A 21 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK 66 (126)
T ss_dssp HHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCC
Confidence 4678999999999999999999999999999999999998776653
No 83
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=98.99 E-value=3.3e-10 Score=68.35 Aligned_cols=45 Identities=7% Similarity=-0.037 Sum_probs=39.6
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccc
Q 035417 7 AVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFS 51 (61)
Q Consensus 7 ~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 51 (61)
+++.+|..|+||||+|+..|+.+++++|+++|++.+.++..+..+
T Consensus 275 ~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~Tp 319 (327)
T 1sw6_A 275 MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRP 319 (327)
T ss_dssp TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCG
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCH
Confidence 578899999999999999999999999999999998887554433
No 84
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.97 E-value=5e-10 Score=63.83 Aligned_cols=41 Identities=15% Similarity=0.261 Sum_probs=38.3
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHH----HHHHhCCCCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDML----KLPATLHVND 41 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v----~~Ll~~~~~~ 41 (61)
|+++|++++.+|..|+||||+|+..++.+++ ++|++.|++.
T Consensus 140 Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 140 LIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 5689999999999999999999999999988 9999999876
No 85
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.96 E-value=4.4e-10 Score=64.93 Aligned_cols=46 Identities=17% Similarity=0.219 Sum_probs=36.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPAT-LHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~-~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++ .|++.+.++.
T Consensus 205 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~ 251 (285)
T 1wdy_A 205 LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 251 (285)
T ss_dssp HHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCT
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCC
Confidence 456788888888888888888888888888888887 6777666653
No 86
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.96 E-value=7e-10 Score=64.08 Aligned_cols=42 Identities=12% Similarity=0.037 Sum_probs=26.8
Q ss_pred CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 4 NGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 4 ~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
.|++++.+|..|+||||+|+..++.+++++|+++|++.+.++
T Consensus 242 ~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 242 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp SSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred cCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 566666666666666666666666666666666666655544
No 87
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=98.95 E-value=5.4e-10 Score=70.84 Aligned_cols=45 Identities=18% Similarity=0.156 Sum_probs=37.9
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
||++||+++.+|.+|+||||+|+..|+.+++++|+++|++.+..+
T Consensus 226 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 226 LLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFP 270 (497)
T ss_dssp HHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCc
Confidence 578999999999999999999999999999999999999877654
No 88
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=98.95 E-value=3e-09 Score=56.81 Aligned_cols=41 Identities=5% Similarity=0.033 Sum_probs=30.9
Q ss_pred CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 5 GSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 5 ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++++.+|..|.||||+|+..|+.+++++|++.|++.+.++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 42 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALN 42 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcC
Confidence 46777777788888888888888888888887777766554
No 89
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.94 E-value=5.7e-10 Score=68.25 Aligned_cols=47 Identities=17% Similarity=0.097 Sum_probs=41.4
Q ss_pred CccCC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNG-SAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|++++ ++++.+|..|+||||+|+..|+.+++++|+++|++.+.++..
T Consensus 298 Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~ 345 (373)
T 2fo1_E 298 LVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDAT 345 (373)
T ss_dssp HHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSS
T ss_pred HHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCC
Confidence 34444 999999999999999999999999999999999998877644
No 90
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.94 E-value=3e-10 Score=68.62 Aligned_cols=35 Identities=11% Similarity=0.076 Sum_probs=14.8
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 035417 8 VTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 8 ~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~ 42 (61)
++.+|..|+||||+|+..|+.+++++|+++|++.+
T Consensus 204 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~ 238 (364)
T 3ljn_A 204 LDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVN 238 (364)
T ss_dssp TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTT
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 44444444444444444444444444444444433
No 91
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=98.94 E-value=6.1e-10 Score=65.00 Aligned_cols=44 Identities=11% Similarity=0.246 Sum_probs=27.2
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
+++|++++. |..|+||||+|+..++.+++++|++.|++.+.++.
T Consensus 154 l~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~ 197 (261)
T 2xai_A 154 LESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNA 197 (261)
T ss_dssp HHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 455666653 56666666666666666666666666666555543
No 92
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=98.94 E-value=9.7e-10 Score=62.47 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=26.2
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++.+|..|+||||+|+..++.+++++|++.|++.+..+
T Consensus 60 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 103 (231)
T 3aji_A 60 LQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVN 103 (231)
T ss_dssp HHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCC
Confidence 45556666666666666666666666666666666665554443
No 93
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.93 E-value=1.2e-09 Score=62.17 Aligned_cols=46 Identities=17% Similarity=0.263 Sum_probs=37.9
Q ss_pred CccCCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQN-MDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d-~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.++ ..|+||||+|+..++.+++++|++.|++.+..+.
T Consensus 135 Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 181 (241)
T 1k1a_A 135 LLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMY 181 (241)
T ss_dssp HHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCT
T ss_pred HHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 457788888887 7888999999888889999999988888776653
No 94
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.93 E-value=8.7e-10 Score=61.55 Aligned_cols=45 Identities=20% Similarity=0.184 Sum_probs=32.9
Q ss_pred ccCC-CCccccCCCCCcHHHHHHHcCC-----HHHHHHHHhCCCCCCcccc
Q 035417 2 LKNG-SAVTLQNMDRKTPIDVAKLNSQ-----HDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 2 l~~g-a~~~~~d~~g~tpl~~A~~~~~-----~~~v~~Ll~~~~~~~~~~~ 46 (61)
+++| ++++.+|..|+||||+|+..+. .+++++|++.|++.+.++.
T Consensus 126 l~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~ 176 (201)
T 3hra_A 126 LEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN 176 (201)
T ss_dssp HHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCT
T ss_pred HHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCC
Confidence 4556 7777777778888888777776 7777888777777766653
No 95
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.92 E-value=1.3e-09 Score=60.82 Aligned_cols=40 Identities=15% Similarity=0.201 Sum_probs=30.3
Q ss_pred CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 6 SAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 6 a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
.+++.+|.+|+||||+|+..|+.+++++|++.|++.+.++
T Consensus 30 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 69 (201)
T 3hra_A 30 YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN 69 (201)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 4777777778888888888788888888887777766554
No 96
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=98.92 E-value=6.1e-10 Score=68.54 Aligned_cols=46 Identities=17% Similarity=0.202 Sum_probs=36.9
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQF 46 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 46 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.+.++.
T Consensus 297 Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~ 342 (437)
T 1n11_A 297 LIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK 342 (437)
T ss_dssp HHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCT
T ss_pred HHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCC
Confidence 4567888888888888888888888888888888888888776653
No 97
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=98.92 E-value=6.6e-11 Score=67.18 Aligned_cols=48 Identities=13% Similarity=-0.000 Sum_probs=39.3
Q ss_pred CccCCCCccccCCCCC-cHHHHHHHcC-----CHHHHHHHHh-CCCCCCcccccc
Q 035417 1 MLKNGSAVTLQNMDRK-TPIDVAKLNS-----QHDMLKLPAT-LHVNDGFRQFYR 48 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~-tpl~~A~~~~-----~~~~v~~Ll~-~~~~~~~~~~~~ 48 (61)
|+++|+++|.+|..|+ ||||+|+..+ ..+++++|++ +|++.+.++..+
T Consensus 100 Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G 154 (186)
T 3t8k_A 100 FLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWG 154 (186)
T ss_dssp HHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTS
T ss_pred HHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCC
Confidence 5688999999999999 9999998844 3568899999 899988777544
No 98
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.92 E-value=9.8e-10 Score=64.98 Aligned_cols=47 Identities=11% Similarity=0.065 Sum_probs=41.1
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYR 48 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 48 (61)
++.|++++..|..|+||||+|+..|+.+++++|++.|++.+.++..+
T Consensus 170 l~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G 216 (276)
T 4hbd_A 170 FRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDG 216 (276)
T ss_dssp HHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Confidence 45677888888999999999999999999999999999988776543
No 99
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=98.92 E-value=1.2e-09 Score=62.25 Aligned_cols=45 Identities=11% Similarity=0.191 Sum_probs=33.2
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+++|++++.+|..|.||||+|+..++.+++++|++.|++.+..+
T Consensus 130 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 174 (237)
T 3b7b_A 130 LLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVN 174 (237)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCC
T ss_pred HHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcC
Confidence 356777777777777777777777777777777777777766554
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.91 E-value=1.3e-09 Score=67.73 Aligned_cols=54 Identities=19% Similarity=0.096 Sum_probs=45.8
Q ss_pred CccCCCCccccC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc----ccccccc
Q 035417 1 MLKNGSAVTLQN--MDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY----RHFSVLD 54 (61)
Q Consensus 1 Ll~~ga~~~~~d--~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~----~~~~~~~ 54 (61)
|+++|++++..+ ..|+||||+|+..++.+++++|++.|++.+..+.. .|+++..
T Consensus 219 LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 219 ALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 468899999988 89999999999999999999999999998877643 4554443
No 101
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.91 E-value=8.3e-10 Score=66.69 Aligned_cols=55 Identities=16% Similarity=0.184 Sum_probs=44.6
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-----CCcccc----ccccccccC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVN-----DGFRQF----YRHFSVLDE 55 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~----~~~~~~~~~ 55 (61)
|+++|++++.+|..|+||||+|+..|+.+++++|++.|++ .+..+. +.|+++..+
T Consensus 159 Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g 222 (364)
T 3ljn_A 159 LVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN 222 (364)
T ss_dssp HHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcC
Confidence 5678999999999999999999999999999999998887 665543 345554433
No 102
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=98.88 E-value=1.9e-09 Score=63.84 Aligned_cols=43 Identities=14% Similarity=0.292 Sum_probs=23.0
Q ss_pred ccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 2 LKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 2 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
+++|++++ .|..|+||||+|+..++.+++++|+++|++.+.++
T Consensus 210 l~~ga~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d 252 (285)
T 3d9h_A 210 LESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKN 252 (285)
T ss_dssp HHTTCCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 34455555 25555555555555555555555555555555444
No 103
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.87 E-value=3.9e-10 Score=65.26 Aligned_cols=38 Identities=5% Similarity=0.019 Sum_probs=35.9
Q ss_pred CCCCccccCCCCCcHHHHHHH--cCCHH-------HHHHHHhCCCCC
Q 035417 4 NGSAVTLQNMDRKTPIDVAKL--NSQHD-------MLKLPATLHVND 41 (61)
Q Consensus 4 ~ga~~~~~d~~g~tpl~~A~~--~~~~~-------~v~~Ll~~~~~~ 41 (61)
+|++++.+|..|+||||+|+. .++.+ ++++|+++|++.
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 899999999999999999999 88888 999999998877
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.86 E-value=1.4e-09 Score=64.80 Aligned_cols=41 Identities=20% Similarity=0.311 Sum_probs=38.4
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVND 41 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~ 41 (61)
|+++|++++.+|.+|+||||+|+..|+.+++++|+++|+..
T Consensus 224 Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 224 LLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 57899999999999999999999999999999999998863
No 105
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=98.85 E-value=5.4e-10 Score=67.32 Aligned_cols=53 Identities=19% Similarity=0.155 Sum_probs=41.7
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccccccccccC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFYRHFSVLDE 55 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 55 (61)
|+++|++++.+|.+|+|||++|+..++.+++++|++.|++.+ ..+.|+++..+
T Consensus 245 Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g--~tpLh~A~~~g 297 (301)
T 2b0o_E 245 LLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF--AFPLHVDYSWV 297 (301)
T ss_dssp HHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHTT--SSCCC------
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC--CChhHHHHhcC
Confidence 578999999999999999999999999999999999987643 35667776544
No 106
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.82 E-value=3.4e-09 Score=59.99 Aligned_cols=47 Identities=17% Similarity=0.191 Sum_probs=38.8
Q ss_pred CccCCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCccccc
Q 035417 1 MLKNGSAVTLQNM-DRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQFY 47 (61)
Q Consensus 1 Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 47 (61)
|++.|++++.++. .|.||||+|+..++.+++++|+++|++.+..+..
T Consensus 162 L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 209 (240)
T 3eu9_A 162 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIK 209 (240)
T ss_dssp HHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTT
T ss_pred HHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 3567888888886 8999999999999999999999999887766543
No 107
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.81 E-value=7.6e-09 Score=59.20 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=25.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVN 40 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~ 40 (61)
|+++|++++.+|..|+||||+|+..++.+++++|++.+++
T Consensus 64 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 103 (236)
T 1ikn_D 64 LLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT 103 (236)
T ss_dssp CCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTT
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 4556666666666666666666666666666666666543
No 108
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.79 E-value=6.8e-09 Score=58.71 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=35.8
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+++|++++.+|..|.||||+|+..++.+++++|++.|++.+..+
T Consensus 95 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 139 (240)
T 3eu9_A 95 LMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD 139 (240)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccC
Confidence 456788888888888888888888888888888888887766554
No 109
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.79 E-value=9.4e-10 Score=63.67 Aligned_cols=38 Identities=11% Similarity=0.007 Sum_probs=35.2
Q ss_pred CCCCccccCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCC
Q 035417 4 NGSAVTLQNMDRKTPIDVAKLNSQ---------HDMLKLPATLHVND 41 (61)
Q Consensus 4 ~ga~~~~~d~~g~tpl~~A~~~~~---------~~~v~~Ll~~~~~~ 41 (61)
+|++++.+|..|+||||+|+..++ .+++++|+++|++.
T Consensus 165 ~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 165 KQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 899999999999999999998777 79999999998876
No 110
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.77 E-value=8.8e-10 Score=65.35 Aligned_cols=45 Identities=20% Similarity=0.103 Sum_probs=38.8
Q ss_pred CccCCCCccccCCCCCcH-HHHHHHcCCHHHHHHHHhCCCCCCccc
Q 035417 1 MLKNGSAVTLQNMDRKTP-IDVAKLNSQHDMLKLPATLHVNDGFRQ 45 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tp-l~~A~~~~~~~~v~~Ll~~~~~~~~~~ 45 (61)
|+++|++++.+|..|+|| ||+|+..++.+++++|+++|++.+..+
T Consensus 180 Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 180 LLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp HHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT
T ss_pred HHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 457788888899999997 999999999999999999998887776
No 111
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=98.73 E-value=2e-09 Score=62.84 Aligned_cols=42 Identities=10% Similarity=0.043 Sum_probs=37.7
Q ss_pred Ccc---CCCCccccCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCCC
Q 035417 1 MLK---NGSAVTLQNMDRKTPIDVAKLNSQ---------HDMLKLPATLHVNDG 42 (61)
Q Consensus 1 Ll~---~ga~~~~~d~~g~tpl~~A~~~~~---------~~~v~~Ll~~~~~~~ 42 (61)
|++ +|++++.+|..|+||||+|+..++ .+++++|++.|++.+
T Consensus 167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 456 899999999999999999999888 899999999988765
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.71 E-value=9.8e-09 Score=53.33 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=32.0
Q ss_pred CccCCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q 035417 1 MLKNGSAVTLQNMDRKTPIDVAKLNSQHDMLKLP 34 (61)
Q Consensus 1 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~L 34 (61)
|+++|++++.+|..|+||||+|+..++.+++++|
T Consensus 76 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 76 LLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 5688999999999999999999999999999987
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.40 E-value=4.9e-09 Score=65.20 Aligned_cols=27 Identities=15% Similarity=0.137 Sum_probs=18.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 035417 16 KTPIDVAKLNSQHDMLKLPATLHVNDG 42 (61)
Q Consensus 16 ~tpl~~A~~~~~~~~v~~Ll~~~~~~~ 42 (61)
+||||+|+.+|+.+++++|+++|++.+
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~~ 190 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTEA 190 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGGH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCccc
Confidence 667777777777777777776666543
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.23 E-value=4.3e-08 Score=60.95 Aligned_cols=28 Identities=14% Similarity=0.127 Sum_probs=18.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 035417 12 NMDRKTPIDVAKLNSQHDMLKLPATLHV 39 (61)
Q Consensus 12 d~~g~tpl~~A~~~~~~~~v~~Ll~~~~ 39 (61)
+..|.||||+|+.+|+.+++++|+++|+
T Consensus 125 ~~~~~tpL~~Aa~~G~~eiv~~Ll~~ga 152 (376)
T 2aja_A 125 QAENYQAFRLAAENGHLHVLNRLCELAP 152 (376)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHSCT
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 3455666666666666666666666664
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=55.79 E-value=12 Score=16.16 Aligned_cols=18 Identities=11% Similarity=0.148 Sum_probs=14.8
Q ss_pred HHHHHHcCCHHHHHHHHh
Q 035417 19 IDVAKLNSQHDMLKLPAT 36 (61)
Q Consensus 19 l~~A~~~~~~~~v~~Ll~ 36 (61)
+..||..|..+.+++|-.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 456899999999998853
Done!