BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035434
         (48 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359492270|ref|XP_003634392.1| PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera]
          Length = 221

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/32 (84%), Positives = 31/32 (96%), Gaps = 1/32 (3%)

Query: 16  EFALRPKLISCNAEAAGVDAGATDNLRRLLRL 47
           +F+LRPKL SCNAEAAG+DAGAT+NLRRLLRL
Sbjct: 190 KFSLRPKL-SCNAEAAGIDAGATNNLRRLLRL 220


>gi|224065789|ref|XP_002301962.1| predicted protein [Populus trichocarpa]
 gi|222843688|gb|EEE81235.1| predicted protein [Populus trichocarpa]
          Length = 253

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/33 (72%), Positives = 30/33 (90%), Gaps = 1/33 (3%)

Query: 16  EFALRPKLISCNAEAAGVDAGATDNLRRLLRLR 48
           +F+++PK  SC AEA+GVDAGATDNLRRLLR+R
Sbjct: 222 KFSMKPKR-SCTAEASGVDAGATDNLRRLLRIR 253


>gi|224083083|ref|XP_002306943.1| predicted protein [Populus trichocarpa]
 gi|222856392|gb|EEE93939.1| predicted protein [Populus trichocarpa]
          Length = 256

 Score = 43.9 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/25 (76%), Positives = 24/25 (96%), Gaps = 1/25 (4%)

Query: 16  EFALRPKLISCNAEAAGVDAGATDN 40
           +F++RPKL SC+AEAAG+DAGATDN
Sbjct: 225 KFSMRPKL-SCSAEAAGIDAGATDN 248


>gi|255538990|ref|XP_002510560.1| hypothetical protein RCOM_1598450 [Ricinus communis]
 gi|223551261|gb|EEF52747.1| hypothetical protein RCOM_1598450 [Ricinus communis]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/25 (76%), Positives = 23/25 (92%), Gaps = 1/25 (4%)

Query: 16  EFALRPKLISCNAEAAGVDAGATDN 40
           +F++RPKL SC AEAAG+DAGATDN
Sbjct: 214 KFSVRPKL-SCTAEAAGIDAGATDN 237


>gi|15223762|ref|NP_173435.1| uncharacterized protein [Arabidopsis thaliana]
 gi|8778991|gb|AAF79906.1|AC022472_15 Contains similarity to nuclear protein ZAP from Mus musculus
           gb|AB033168. ESTs gb|AV521697, gb|AV440130 come from
           this gene [Arabidopsis thaliana]
 gi|26450344|dbj|BAC42288.1| unknown protein [Arabidopsis thaliana]
 gi|29824311|gb|AAP04116.1| unknown protein [Arabidopsis thaliana]
 gi|332191811|gb|AEE29932.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 193

 Score = 39.3 bits (90), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/32 (56%), Positives = 25/32 (78%), Gaps = 1/32 (3%)

Query: 17  FALRPKLISCNAEAAGVDAGATDNLRRLLRLR 48
           F+++PKL  CN EAAG    AT+N+RR+L+LR
Sbjct: 163 FSIKPKL-RCNVEAAGKSDVATNNIRRVLQLR 193


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.139    0.406 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 681,494,558
Number of Sequences: 23463169
Number of extensions: 17094090
Number of successful extensions: 51683
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 51679
Number of HSP's gapped (non-prelim): 8
length of query: 48
length of database: 8,064,228,071
effective HSP length: 21
effective length of query: 27
effective length of database: 7,571,501,522
effective search space: 204430541094
effective search space used: 204430541094
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 69 (31.2 bits)