BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035443
(65 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|25992541|gb|AAN77150.1| fiber protein Fb11 [Gossypium barbadense]
Length = 65
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 59/64 (92%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
MAVM+KL++FV QEPVVAASCL+ FGLFLPAVVRP+LDS ESSKQVPQPAL DVVAGVT
Sbjct: 1 MAVMQKLKIFVVQEPVVAASCLIAGFGLFLPAVVRPILDSLESSKQVPQPALRDVVAGVT 60
Query: 61 GKKQ 64
GKKQ
Sbjct: 61 GKKQ 64
>gi|418730179|gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]
Length = 65
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/65 (84%), Positives = 59/65 (90%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
MAVM KLRMFV QEPVVAASCL+ FGLFLPAVVRP+LDSFESSKQVP P LSDVVAG+T
Sbjct: 1 MAVMGKLRMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPAPPLSDVVAGMT 60
Query: 61 GKKQQ 65
GKKQ+
Sbjct: 61 GKKQE 65
>gi|330318662|gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]
Length = 64
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 58/64 (90%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
M VMEKL++FV QEPVV ASCL+ FGLFLPAVVRP+LDSFE+SKQVP PAL+DVVAG+T
Sbjct: 1 MPVMEKLKIFVVQEPVVTASCLIAGFGLFLPAVVRPILDSFETSKQVPPPALNDVVAGMT 60
Query: 61 GKKQ 64
GKKQ
Sbjct: 61 GKKQ 64
>gi|18407103|ref|NP_566079.1| uncharacterized protein [Arabidopsis thaliana]
gi|15215610|gb|AAK91350.1| F11C10.23/F11C10.23 [Arabidopsis thaliana]
gi|20197774|gb|AAD20165.2| expressed protein [Arabidopsis thaliana]
gi|20334882|gb|AAM16197.1| At2g46540/F11C10.23 [Arabidopsis thaliana]
gi|21554416|gb|AAM63521.1| unknown [Arabidopsis thaliana]
gi|330255624|gb|AEC10718.1| uncharacterized protein [Arabidopsis thaliana]
Length = 65
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 57/64 (89%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
M VMEKLRMFVAQEPVVAASCL+G GLFLPAVVRP+LDS E+SKQV P L+DV+AGVT
Sbjct: 1 MPVMEKLRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGVT 60
Query: 61 GKKQ 64
GKKQ
Sbjct: 61 GKKQ 64
>gi|297828383|ref|XP_002882074.1| hypothetical protein ARALYDRAFT_483814 [Arabidopsis lyrata subsp.
lyrata]
gi|297327913|gb|EFH58333.1| hypothetical protein ARALYDRAFT_483814 [Arabidopsis lyrata subsp.
lyrata]
Length = 65
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 57/64 (89%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
M +MEKLRMFVAQEPVVAASCL+G GLFLPAVVRP+LDS E+SKQV P L+DV+AGVT
Sbjct: 1 MPIMEKLRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGVT 60
Query: 61 GKKQ 64
GKKQ
Sbjct: 61 GKKQ 64
>gi|356506077|ref|XP_003521814.1| PREDICTED: uncharacterized protein LOC100785256 [Glycine max]
gi|356573241|ref|XP_003554771.1| PREDICTED: uncharacterized protein LOC100795854 isoform 1
[Glycine max]
gi|356573243|ref|XP_003554772.1| PREDICTED: uncharacterized protein LOC100795854 isoform 2
[Glycine max]
Length = 63
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 58/63 (92%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
MAVME+L+MFV QEPVVAASCL+ FGLFLPA VRPMLDS++++KQ PQPALSDVVAG+T
Sbjct: 1 MAVMERLKMFVVQEPVVAASCLIAGFGLFLPAFVRPMLDSYQATKQPPQPALSDVVAGMT 60
Query: 61 GKK 63
GKK
Sbjct: 61 GKK 63
>gi|388510700|gb|AFK43416.1| unknown [Medicago truncatula]
Length = 63
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 58/63 (92%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
MAVME+LRMFVAQEPVVAASCL+ FGLFLPA VRPMLD++ +++Q PQPALSDVVAG+T
Sbjct: 1 MAVMERLRMFVAQEPVVAASCLIAGFGLFLPAFVRPMLDTYRAAEQPPQPALSDVVAGMT 60
Query: 61 GKK 63
GKK
Sbjct: 61 GKK 63
>gi|115465183|ref|NP_001056191.1| Os05g0542100 [Oryza sativa Japonica Group]
gi|55908883|gb|AAV67826.1| putative fiber protein [Oryza sativa Japonica Group]
gi|113579742|dbj|BAF18105.1| Os05g0542100 [Oryza sativa Japonica Group]
gi|215767984|dbj|BAH00213.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197194|gb|EEC79621.1| hypothetical protein OsI_20832 [Oryza sativa Indica Group]
gi|222632415|gb|EEE64547.1| hypothetical protein OsJ_19399 [Oryza sativa Japonica Group]
Length = 65
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 58/65 (89%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
M VMEKL++F +EPVV ASCL+ FGLFLPAVVRPMLDS+E++KQVP PAL+DVVAGVT
Sbjct: 1 MGVMEKLKIFAVKEPVVTASCLIAGFGLFLPAVVRPMLDSWETAKQVPPPALNDVVAGVT 60
Query: 61 GKKQQ 65
GKK++
Sbjct: 61 GKKKE 65
>gi|307136420|gb|ADN34227.1| fiber protein fb11 [Cucumis melo subsp. melo]
Length = 63
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 56/63 (88%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
M VMEKL+MFV QEPVVAASC++G GLFLPA VRP+LDS+E+SKQVPQP LSDVVA +T
Sbjct: 1 MPVMEKLKMFVVQEPVVAASCIIGGIGLFLPAFVRPILDSYEASKQVPQPVLSDVVASMT 60
Query: 61 GKK 63
GKK
Sbjct: 61 GKK 63
>gi|225470932|ref|XP_002265113.1| PREDICTED: uncharacterized protein LOC100257117 [Vitis vinifera]
gi|297745487|emb|CBI40567.3| unnamed protein product [Vitis vinifera]
Length = 65
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 56/64 (87%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
M V+EKL+M + QEPVVAASC + GLFLPAVVRP+LDS E+SKQVPQPALSDVVAG+T
Sbjct: 1 MPVVEKLKMLIVQEPVVAASCFIAGVGLFLPAVVRPILDSLETSKQVPQPALSDVVAGMT 60
Query: 61 GKKQ 64
GKKQ
Sbjct: 61 GKKQ 64
>gi|449445519|ref|XP_004140520.1| PREDICTED: uncharacterized protein LOC101213029 [Cucumis sativus]
gi|449445521|ref|XP_004140521.1| PREDICTED: uncharacterized protein LOC101213029 [Cucumis sativus]
Length = 63
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 55/63 (87%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
M VMEKL+MFV QEPVVAASCL+G GLFLPA VRP+LDS+ +SKQ PQP LSDVVAG+T
Sbjct: 1 MPVMEKLKMFVVQEPVVAASCLIGGIGLFLPAFVRPILDSYAASKQAPQPVLSDVVAGMT 60
Query: 61 GKK 63
GKK
Sbjct: 61 GKK 63
>gi|226506684|ref|NP_001148662.1| LOC100282278 [Zea mays]
gi|242091243|ref|XP_002441454.1| hypothetical protein SORBIDRAFT_09g027070 [Sorghum bicolor]
gi|195609012|gb|ACG26336.1| fiber protein Fb11 [Zea mays]
gi|195621188|gb|ACG32424.1| fiber protein Fb11 [Zea mays]
gi|195658433|gb|ACG48684.1| fiber protein Fb11 [Zea mays]
gi|241946739|gb|EES19884.1| hypothetical protein SORBIDRAFT_09g027070 [Sorghum bicolor]
gi|413948287|gb|AFW80936.1| fiber protein Fb11 [Zea mays]
Length = 64
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 59/64 (92%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
MAVMEKL++FV +EPVVAASCL+ FGLFLPAVVRP+LDS+E++++VP P L+DVVAGVT
Sbjct: 1 MAVMEKLKIFVVKEPVVAASCLIAGFGLFLPAVVRPILDSWETAEKVPPPPLNDVVAGVT 60
Query: 61 GKKQ 64
GKK+
Sbjct: 61 GKKK 64
>gi|194697156|gb|ACF82662.1| unknown [Zea mays]
gi|194704466|gb|ACF86317.1| unknown [Zea mays]
gi|195610118|gb|ACG26889.1| fiber protein Fb11 [Zea mays]
gi|195615292|gb|ACG29476.1| fiber protein Fb11 [Zea mays]
Length = 64
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 59/64 (92%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
MAVMEKL++FV +EPVVAASCL+ FGLFLPAVVRP+LDS+++++QVP P L+DVVAGVT
Sbjct: 1 MAVMEKLKIFVVKEPVVAASCLIAGFGLFLPAVVRPILDSWQTAEQVPPPLLNDVVAGVT 60
Query: 61 GKKQ 64
GKK+
Sbjct: 61 GKKK 64
>gi|224067998|ref|XP_002302638.1| predicted protein [Populus trichocarpa]
gi|118482840|gb|ABK93335.1| unknown [Populus trichocarpa]
gi|222844364|gb|EEE81911.1| predicted protein [Populus trichocarpa]
Length = 67
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 57/66 (86%), Gaps = 2/66 (3%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVP--QPALSDVVAG 58
M VMEKLRMFVAQEPVVAASCL+ GLFLPAVVRP+LDS E SK VP QP++SDV+AG
Sbjct: 1 MPVMEKLRMFVAQEPVVAASCLIAGIGLFLPAVVRPILDSLEGSKHVPEKQPSISDVLAG 60
Query: 59 VTGKKQ 64
+TGK+Q
Sbjct: 61 MTGKRQ 66
>gi|388522549|gb|AFK49336.1| unknown [Lotus japonicus]
Length = 63
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 55/63 (87%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
MAVME L+MFV Q+PVVAASCL+ FGLFLPA VRPMLDS++ +K PQPAL+DVVAG+T
Sbjct: 1 MAVMENLKMFVVQQPVVAASCLIAGFGLFLPAFVRPMLDSYQGTKPAPQPALNDVVAGMT 60
Query: 61 GKK 63
GKK
Sbjct: 61 GKK 63
>gi|357132743|ref|XP_003567988.1| PREDICTED: uncharacterized protein LOC100823876 [Brachypodium
distachyon]
Length = 64
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 57/64 (89%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
M VM+KL++FV +EPVVAASCL+ FGLFLPAVVRPMLDS+E++++VP L+DVVAGVT
Sbjct: 1 MGVMDKLKIFVVKEPVVAASCLIAGFGLFLPAVVRPMLDSWETAEKVPPTPLNDVVAGVT 60
Query: 61 GKKQ 64
GKK+
Sbjct: 61 GKKK 64
>gi|255564657|ref|XP_002523323.1| conserved hypothetical protein [Ricinus communis]
gi|223537411|gb|EEF39039.1| conserved hypothetical protein [Ricinus communis]
Length = 57
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 51/55 (92%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDV 55
MAVMEKL++FV QEPVVAASCL+ GLFLPAVVRP+LDSFE+SKQVPQPALSDV
Sbjct: 1 MAVMEKLKIFVVQEPVVAASCLIAGVGLFLPAVVRPILDSFETSKQVPQPALSDV 55
>gi|413946295|gb|AFW78944.1| fiber protein Fb11, partial [Zea mays]
Length = 132
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 54/59 (91%)
Query: 6 KLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVTGKKQ 64
KL++FV +EPVVAASCL+ FGLFLPAVVRP+LDS+++++QVP P L+DVVAGVTGKK+
Sbjct: 74 KLKIFVVKEPVVAASCLIAGFGLFLPAVVRPILDSWQTAEQVPPPLLNDVVAGVTGKKK 132
>gi|326510307|dbj|BAJ87370.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522050|dbj|BAK04153.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 66
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPA-LSDVVAGV 59
M VM++L++FV +EPVVAASCL+ FGLFLPAVVRPMLDS+E+ K P L DVVAGV
Sbjct: 1 MGVMDRLKIFVVKEPVVAASCLIAGFGLFLPAVVRPMLDSWETEKNATTPVELKDVVAGV 60
Query: 60 TGKKQ 64
TGKK
Sbjct: 61 TGKKT 65
>gi|226528385|ref|NP_001151960.1| fiber protein Fb11 [Zea mays]
gi|195651367|gb|ACG45151.1| fiber protein Fb11 [Zea mays]
Length = 72
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 50/55 (90%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDV 55
MAVMEKL++FV +EPVVAASCL+ FGLFLPAVVRP+LDS+++++QVP P L+DV
Sbjct: 1 MAVMEKLKIFVVKEPVVAASCLIAGFGLFLPAVVRPILDSWQTAEQVPPPLLNDV 55
>gi|116779621|gb|ABK21369.1| unknown [Picea sitchensis]
Length = 65
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVT 60
M +KLR+F+ +EPVV ASC +G GL LPA VRP+LDS +SS+ VPQP+L+ VVAG+T
Sbjct: 1 MGFADKLRVFIVKEPVVFASCFIGGIGLILPAFVRPILDSMDSSEAVPQPSLNKVVAGMT 60
Query: 61 GKKQQ 65
GKK +
Sbjct: 61 GKKLE 65
>gi|195655749|gb|ACG47342.1| fiber protein Fb11 [Zea mays]
Length = 57
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 49/54 (90%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSD 54
MAVMEKL++FV +EPVVAASCL+ FGLFLPAVVRP+LDS+++++QVP P L+D
Sbjct: 1 MAVMEKLKIFVVKEPVVAASCLIAGFGLFLPAVVRPILDSWQTAEQVPPPLLND 54
>gi|242054157|ref|XP_002456224.1| hypothetical protein SORBIDRAFT_03g032410 [Sorghum bicolor]
gi|241928199|gb|EES01344.1| hypothetical protein SORBIDRAFT_03g032410 [Sorghum bicolor]
Length = 50
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 42/45 (93%)
Query: 4 MEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVP 48
M +LR+FVAQEPVVAASCL+ FGLFLPAVVRP+LDSFE++KQVP
Sbjct: 1 MGRLRIFVAQEPVVAASCLIAGFGLFLPAVVRPILDSFETAKQVP 45
>gi|115439461|ref|NP_001044010.1| Os01g0705500 [Oryza sativa Japonica Group]
gi|113533541|dbj|BAF05924.1| Os01g0705500 [Oryza sativa Japonica Group]
gi|218188928|gb|EEC71355.1| hypothetical protein OsI_03438 [Oryza sativa Indica Group]
gi|222619133|gb|EEE55265.1| hypothetical protein OsJ_03181 [Oryza sativa Japonica Group]
Length = 53
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVP 48
M M KLR+FV QEPVVAASCL+ FGLFLPAVVRP+LDSFE++KQ P
Sbjct: 1 MGAMGKLRVFVVQEPVVAASCLIAGFGLFLPAVVRPILDSFETAKQAP 48
>gi|224130564|ref|XP_002320872.1| predicted protein [Populus trichocarpa]
gi|222861645|gb|EEE99187.1| predicted protein [Populus trichocarpa]
Length = 69
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAF--GLFLPAVVRPMLDSFESSKQVP--QPALSDVV 56
M VMEKLR FVAQ+PVVA F + A VRPMLDS E K VP QP++SDV+
Sbjct: 1 MPVMEKLRRFVAQDPVVAVCSSSSQFRASINDHAAVRPMLDSLEGRKHVPERQPSISDVL 60
Query: 57 AGVTGKKQ 64
AG+TGK+Q
Sbjct: 61 AGMTGKQQ 68
>gi|449532132|ref|XP_004173037.1| PREDICTED: uncharacterized protein LOC101232340 [Cucumis sativus]
Length = 89
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Query: 14 EPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVTGKK 63
P +++C GLFLPA VRP+LDS+ +SKQ PQP LSDVVAG+TGKK
Sbjct: 42 NPKSSSAC--PYLGLFLPAFVRPILDSYAASKQAPQPVLSDVVAGMTGKK 89
>gi|302143927|emb|CBI23032.3| unnamed protein product [Vitis vinifera]
Length = 96
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 25 AFGLFLPAVVRPMLDSFESSKQVPQPALSDVVAG 58
A LFL AV RP+LDSFE+SKQV QPAL+D V+
Sbjct: 17 ATSLFLSAVRRPVLDSFETSKQVHQPALNDAVSN 50
>gi|296084585|emb|CBI25606.3| unnamed protein product [Vitis vinifera]
Length = 89
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 27 GLFLPAVVRPMLDSFESSKQVPQPALSDVVAGVTGKKQQ 65
GLFL VVR +LDSFE+SKQV QPALS+ V KK +
Sbjct: 45 GLFLSVVVRLVLDSFETSKQVNQPALSNFRKAVELKKSR 83
>gi|413948286|gb|AFW80935.1| hypothetical protein ZEAMMB73_170595 [Zea mays]
Length = 59
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 1 MAVMEKLRMFVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVP 48
MAVMEKL++FV +EPVVAASCL+ FG RP S ++ P
Sbjct: 1 MAVMEKLKIFVVKEPVVAASCLIAGFG------TRPGFSSANPTRCAP 42
>gi|412986522|emb|CCO14948.1| unknown protein [Bathycoccus prasinos]
Length = 94
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 10 FVAQEPVVAASCLMGAFGLFLPAVVRPMLDSFESSKQVPQ-PALSDVVAGVTGKK 63
F+ +EP+V SC +GA G LP V P+ + + ++ + P+ VV + G K
Sbjct: 39 FLQREPIVVWSCALGAIGAALPVCVPPIRNMLRADQEPTRPPSAQSVVEALRGGK 93
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.133 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 901,724,121
Number of Sequences: 23463169
Number of extensions: 26700516
Number of successful extensions: 60774
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 60740
Number of HSP's gapped (non-prelim): 31
length of query: 65
length of database: 8,064,228,071
effective HSP length: 37
effective length of query: 28
effective length of database: 7,196,090,818
effective search space: 201490542904
effective search space used: 201490542904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)