BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035449
(54 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224130032|ref|XP_002328637.1| predicted protein [Populus trichocarpa]
gi|222838813|gb|EEE77164.1| predicted protein [Populus trichocarpa]
Length = 54
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 1 MADSVVSLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
MADS VS++++KA WHSQVHDEEKWALN KLLRA GLFA SIFLMR+YGDLMAI
Sbjct: 1 MADSSVSIDQLKAIWHSQVHDEEKWALNMKLLRAVGLFAGSIFLMRNYGDLMAI 54
>gi|255547179|ref|XP_002514647.1| conserved hypothetical protein [Ricinus communis]
gi|223546251|gb|EEF47753.1| conserved hypothetical protein [Ricinus communis]
Length = 54
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 50/54 (92%)
Query: 1 MADSVVSLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
MADS++S+EK+KAF +SQ+HDEEKWALN KLLRA GLFA SIFLMR+YGDLMA+
Sbjct: 1 MADSMISVEKLKAFLNSQIHDEEKWALNMKLLRAAGLFAGSIFLMRNYGDLMAV 54
>gi|225456590|ref|XP_002266901.1| PREDICTED: mitochondrial import receptor subunit TOM5 homolog
[Vitis vinifera]
gi|297734066|emb|CBI15313.3| unnamed protein product [Vitis vinifera]
Length = 54
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 1 MADSVVSLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
MAD+VVSL+ +KAFW++Q+HDEEKWALN KLLRA GLFA SIFLMR++G+ MAI
Sbjct: 1 MADTVVSLDNIKAFWNAQIHDEEKWALNMKLLRAAGLFAGSIFLMRNFGEYMAI 54
>gi|297810907|ref|XP_002873337.1| hypothetical protein ARALYDRAFT_908751 [Arabidopsis lyrata subsp.
lyrata]
gi|297319174|gb|EFH49596.1| hypothetical protein ARALYDRAFT_908751 [Arabidopsis lyrata subsp.
lyrata]
Length = 54
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 49/54 (90%)
Query: 1 MADSVVSLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
M ++VVSL+K+KAFWHS+VHDE+KWA+N KLLRA G+FA +FLMRSYGDLMA+
Sbjct: 1 MVNNVVSLDKLKAFWHSEVHDEQKWAVNMKLLRALGMFAGGVFLMRSYGDLMAV 54
>gi|15241504|ref|NP_196421.1| mitochondrial import receptor subunit TOM5-like protein
[Arabidopsis thaliana]
gi|46577135|sp|Q9SD80.3|TOM5_ARATH RecName: Full=Mitochondrial import receptor subunit TOM5 homolog;
AltName: Full=Translocase of outer membrane 5 kDa
subunit homolog
gi|6562318|emb|CAB62616.1| putative protein [Arabidopsis thaliana]
gi|38566510|gb|AAR24145.1| At5g08040 [Arabidopsis thaliana]
gi|40823543|gb|AAR92288.1| At5g08040 [Arabidopsis thaliana]
gi|332003854|gb|AED91237.1| mitochondrial import receptor subunit TOM5-like protein
[Arabidopsis thaliana]
Length = 54
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 1 MADSVVSLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
M ++VVS+EK+KA WHS+VHDE+KWA+N KLLRA G+FA + LMRSYGDLM +
Sbjct: 1 MVNNVVSIEKMKALWHSEVHDEQKWAVNMKLLRALGMFAGGVVLMRSYGDLMGV 54
>gi|356511794|ref|XP_003524608.1| PREDICTED: mitochondrial import receptor subunit TOM5 homolog
[Glycine max]
gi|356562628|ref|XP_003549571.1| PREDICTED: mitochondrial import receptor subunit TOM5 homolog
[Glycine max]
Length = 54
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 47/54 (87%)
Query: 1 MADSVVSLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
MADSV+S++ +K F +SQ++D+EKWA NAKLLRA GLFA SI LMR+YGDLMAI
Sbjct: 1 MADSVISIQYLKDFVNSQIYDDEKWAFNAKLLRAAGLFAGSILLMRNYGDLMAI 54
>gi|255646929|gb|ACU23934.1| unknown [Glycine max]
Length = 54
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 46/54 (85%)
Query: 1 MADSVVSLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
MADSV+S++ +K F +SQ++D+EKWA NAKLLRA GLFA SI LMR+YG LMAI
Sbjct: 1 MADSVISIQYLKDFVNSQIYDDEKWAFNAKLLRAAGLFAGSILLMRNYGALMAI 54
>gi|449439337|ref|XP_004137442.1| PREDICTED: mitochondrial import receptor subunit TOM5 homolog
[Cucumis sativus]
gi|449486936|ref|XP_004157447.1| PREDICTED: mitochondrial import receptor subunit TOM5 homolog
[Cucumis sativus]
Length = 69
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 7 SLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
S+E VK+F++SQV+DEEKWALN KLLRA G+FA SI LMR+YGDLM I
Sbjct: 22 SVETVKSFFNSQVYDEEKWALNMKLLRAAGMFAGSILLMRNYGDLMTI 69
>gi|242038889|ref|XP_002466839.1| hypothetical protein SORBIDRAFT_01g015010 [Sorghum bicolor]
gi|241920693|gb|EER93837.1| hypothetical protein SORBIDRAFT_01g015010 [Sorghum bicolor]
Length = 53
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 7 SLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
S+EK+KA W SQV+DEE+WALN KLL+A GLFA SIFLMR++GDLMAI
Sbjct: 6 SVEKLKALWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI 53
>gi|77556203|gb|ABA98999.1| hypothetical protein LOC_Os12g38650 [Oryza sativa Japonica Group]
gi|125537133|gb|EAY83621.1| hypothetical protein OsI_38848 [Oryza sativa Indica Group]
gi|125579817|gb|EAZ20963.1| hypothetical protein OsJ_36616 [Oryza sativa Japonica Group]
gi|215765186|dbj|BAG86883.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187121|gb|EEC69548.1| hypothetical protein OsI_38840 [Oryza sativa Indica Group]
Length = 54
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 8 LEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
+EKVKA W SQV+DEE WA N KL++AGGLF ASIF+MR++GDLMAI
Sbjct: 8 VEKVKALWDSQVNDEEAWAFNYKLMKAGGLFVASIFVMRNFGDLMAI 54
>gi|195609852|gb|ACG26756.1| hypothetical protein [Zea mays]
gi|195633789|gb|ACG36739.1| hypothetical protein [Zea mays]
gi|195637746|gb|ACG38341.1| hypothetical protein [Zea mays]
gi|414871700|tpg|DAA50257.1| TPA: hypothetical protein ZEAMMB73_053483 [Zea mays]
Length = 53
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 42/48 (87%)
Query: 7 SLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
++EK+K W SQV+DEE+WALN KLL+A GLFA SIFLMR++GDLMAI
Sbjct: 6 AVEKLKVLWDSQVNDEEQWALNYKLLKAAGLFAGSIFLMRNFGDLMAI 53
>gi|116778538|gb|ABK20900.1| unknown [Picea sitchensis]
gi|224286669|gb|ACN41038.1| unknown [Picea sitchensis]
Length = 54
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 1 MADSVVSLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
MA V +EK+K W++QV DEEKWA N +LLRA GLFA SIFLMR++G+LMA+
Sbjct: 1 MAVGGVVIEKLKQTWNAQVQDEEKWAANMRLLRAAGLFAGSIFLMRNFGELMAV 54
>gi|326501890|dbj|BAK06437.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517886|dbj|BAK07195.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 52
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 7 SLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
LEK+K+ W+SQV DEE+WA+N ++L+A G+FA SIFLMR++GDLM I
Sbjct: 5 PLEKLKSLWNSQVMDEEQWAVNYRVLKATGIFAGSIFLMRTFGDLMVI 52
>gi|357121189|ref|XP_003562303.1| PREDICTED: uncharacterized protein LOC100836735 [Brachypodium
distachyon]
Length = 52
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 1 MADSVVSLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
MA S LEK+K+ W+SQV DEE+WALN K+L+A GLFA SIF+MR++G+ MAI
Sbjct: 1 MAPS--PLEKLKSIWNSQVMDEEQWALNYKVLKAAGLFAGSIFVMRNFGEQMAI 52
>gi|357160213|ref|XP_003578692.1| PREDICTED: mitochondrial import receptor subunit TOM5 homolog
[Brachypodium distachyon]
Length = 55
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 40/48 (83%)
Query: 7 SLEKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
++EK++AFW SQ H+E+ WA+N ++L+A GLFA SI LM+++GD MA+
Sbjct: 8 AMEKIRAFWDSQYHNEQNWAVNYRVLKAAGLFAGSIILMQNFGDSMAV 55
>gi|195639978|gb|ACG39457.1| hypothetical protein [Zea mays]
gi|195654909|gb|ACG46922.1| hypothetical protein [Zea mays]
Length = 58
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 9 EKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
+K+ F +SQ++DE WA N KL +A G+FA SI MR+ GD++AI
Sbjct: 13 DKLTVFLYSQLYDERNWAKNKKLAKALGVFAGSILFMRTCGDMVAI 58
>gi|384249526|gb|EIE23007.1| hypothetical protein COCSUDRAFT_53482 [Coccomyxa subellipsoidea
C-169]
Length = 62
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 9 EKVKAFWHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMAI 54
EK KA+ S+ +DE+K+ N LLRA GLF+AS F++ ++GD ++
Sbjct: 17 EKWKAWLASEYNDEQKFKANLALLRALGLFSASAFVIINFGDAFSV 62
>gi|358058777|dbj|GAA95740.1| hypothetical protein E5Q_02397 [Mixia osmundae IAM 14324]
Length = 65
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 9 EKVKAF----WHSQVHDEEKWALNAKLLRAGGLFAASIFLMRSYGDLMA 53
++VK++ W S+ D EK N++LL A GLF+A+I R YG+++A
Sbjct: 14 QEVKSYFQQLWKSETTDPEKRKANSELLVAVGLFSAAIVFFRQYGEMLA 62
>gi|357115833|ref|XP_003559690.1| PREDICTED: uncharacterized protein LOC100843819 [Brachypodium
distachyon]
Length = 77
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 27 LNAKLLRAGGLFAASIFLMRSYGDLMAI 54
L K+++A GLFA SIF+MR++G+ MAI
Sbjct: 46 LPEKVVKAAGLFAGSIFVMRNFGEQMAI 73
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 754,577,630
Number of Sequences: 23463169
Number of extensions: 18118184
Number of successful extensions: 55018
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54999
Number of HSP's gapped (non-prelim): 19
length of query: 54
length of database: 8,064,228,071
effective HSP length: 27
effective length of query: 27
effective length of database: 7,430,722,508
effective search space: 200629507716
effective search space used: 200629507716
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)