BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035453
MAPPPGPYSGTSTLALVARASAFTFGVVYGNMKLKILKMKAKTHSKAEAKAHH

High Scoring Gene Products

Symbol, full name Information P value
AT3G01130 protein from Arabidopsis thaliana 1.8e-16
AT5G15320 protein from Arabidopsis thaliana 8.8e-15

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035453
        (53 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2102062 - symbol:AT3G01130 "AT3G01130" species...   204  1.8e-16   1
TAIR|locus:2150906 - symbol:AT5G15320 "AT5G15320" species...   188  8.8e-15   1


>TAIR|locus:2102062 [details] [associations]
            symbol:AT3G01130 "AT3G01130" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002686 EMBL:AC008261 ProtClustDB:CLSN2715705
            EMBL:BT025695 IPI:IPI00519979 RefSeq:NP_566131.2 UniGene:At.18321
            PRIDE:Q9MAC4 EnsemblPlants:AT3G01130.1 GeneID:821228
            KEGG:ath:AT3G01130 TAIR:At3g01130 InParanoid:Q9MAC4 OMA:KEEVHDH
            PhylomeDB:Q9MAC4 Genevestigator:Q9MAC4 Uniprot:Q9MAC4
        Length = 53

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 40/53 (75%), Positives = 45/53 (84%)

Query:     1 MAPPPGPYSGTSTLALVARASAFTFGVVYGNMKLKILKMKAKTHSKAEAKAHH 53
             MAPPPG YSGTSTLALVARASAF  G++YGN+KLK LK+K  +  KAEAKAHH
Sbjct:     1 MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKIKKNSQIKAEAKAHH 53


>TAIR|locus:2150906 [details] [associations]
            symbol:AT5G15320 "AT5G15320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR
            UniGene:At.25319 EMBL:BT024516 EMBL:AK118278 IPI:IPI00523851
            RefSeq:NP_197036.2 STRING:Q8GXE7 PRIDE:Q8GXE7
            EnsemblPlants:AT5G15320.1 GeneID:831384 KEGG:ath:AT5G15320
            TAIR:At5g15320 HOGENOM:HOG000240609 InParanoid:Q8GXE7 OMA:KIKSMSQ
            PhylomeDB:Q8GXE7 ProtClustDB:CLSN2715705 Genevestigator:Q8GXE7
            Uniprot:Q8GXE7
        Length = 53

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 37/53 (69%), Positives = 43/53 (81%)

Query:     1 MAPPPGPYSGTSTLALVARASAFTFGVVYGNMKLKILKMKAKTHSKAEAKAHH 53
             M  PPG YSGTS+LALVARASAF  G+VYGNMKLK+LK+K+ +  K EA AHH
Sbjct:     1 MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKVLKIKSMSQKKVEATAHH 53


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.127   0.365    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       53        53   0.00091  102 3  11 22  0.41    27
                                                     29  0.50    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  351 (38 KB)
  Total size of DFA:  58 KB (2058 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.06u 0.13s 7.19t   Elapsed:  00:00:00
  Total cpu time:  7.06u 0.13s 7.19t   Elapsed:  00:00:00
  Start:  Thu May  9 16:24:41 2013   End:  Thu May  9 16:24:41 2013

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