BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035456
(58 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H5T6|LTI6A_ORYSJ Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica
GN=LTI6A PE=2 SV=1
Length = 56
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Query: 1 MADEGTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
MAD TATCIDIILAIILPPLGVF KFGC +EFWICLLLT FGY+PGIIYAV+ ITK
Sbjct: 1 MADS-TATCIDIILAIILPPLGVFFKFGCGIEFWICLLLTFFGYLPGIIYAVWVITK 56
>sp|Q0DKW8|LTI6B_ORYSJ Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica
GN=LTI6B PE=2 SV=1
Length = 55
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 48/54 (88%)
Query: 4 EGTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
GTA CIDI++AIILPPLGVFLKFGC EFWICLLLT GYIPGIIYA+YAITK
Sbjct: 2 AGTANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITK 55
>sp|A2Y075|LTI6B_ORYSI Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B
PE=3 SV=2
Length = 55
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 48/54 (88%)
Query: 4 EGTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
GTA CIDI++AIILPPLGVFLKFGC EFWICLLLT GYIPGIIYA+YAITK
Sbjct: 2 AGTANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITK 55
>sp|Q9ZNS6|RCI2B_ARATH Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2
SV=1
Length = 54
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 50/53 (94%)
Query: 5 GTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
TAT ++IILAIILPPLGVFLKFGCKVEFWICL+LT+FGY+PGI+YA+Y ITK
Sbjct: 2 STATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54
>sp|Q9ZNQ7|RCI2A_ARATH Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2
SV=1
Length = 54
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 48/53 (90%)
Query: 5 GTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
TAT +DII+AI+LPPLGVFL+FGC VEFWICL+LT+ GYIPGIIYA+Y +TK
Sbjct: 2 STATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54
>sp|Q9ARD5|LT02_HORVU Low temperature-induced protein lt101.2 OS=Hordeum vulgare
GN=LT101.2 PE=2 SV=1
Length = 54
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 5 GTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
+AT I++ILAIILPP+GVFL++G VEFWICLLLT+ GYIPGIIYAVY +
Sbjct: 2 ASATFIEVILAIILPPVGVFLRYGLAVEFWICLLLTLLGYIPGIIYAVYVLVA 54
>sp|P68179|LT01_HORVU Low temperature-induced protein lt101.1 OS=Hordeum vulgare
GN=LT101.1 PE=2 SV=1
Length = 54
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 45/52 (86%)
Query: 5 GTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAIT 56
G+AT +++ILAIILPP+GVFL++ VEFWICLLLTI GYIPGIIYAVY +
Sbjct: 2 GSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53
>sp|P68178|ESI3_LOPEL Salt stress-induced hydrophobic peptide ESI3 OS=Lophopyrum
elongatum GN=ESI3 PE=2 SV=1
Length = 54
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 45/52 (86%)
Query: 5 GTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAIT 56
G+AT +++ILAIILPP+GVFL++ VEFWICLLLTI GYIPGIIYAVY +
Sbjct: 2 GSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53
>sp|Q9LRI7|OSR8_ORYSJ Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8
PE=3 SV=1
Length = 72
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 1 MADEGTATCIDIILAIILPPLGVFLKFGC-KVEFWICLLLTIFGYIPGIIYAVYAI 55
MA T ++I+LAIILPPLGVFL+FGC +EF ICLLLTI GY+PGIIYAVY +
Sbjct: 1 MASGRCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVL 56
>sp|Q9FE70|RC21_ARATH UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana
GN=At1g57550 PE=2 SV=1
Length = 52
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 43/51 (84%)
Query: 7 ATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
+ ++++ AI +PP+GVFL++G +EFW+CLLLT+F +IPG+IYA+Y +TK
Sbjct: 2 GSFLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVLTK 52
>sp|Q9M095|RC23_ARATH UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana
GN=At4g30650 PE=3 SV=1
Length = 73
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Query: 1 MADEGTATCIDIILAIILPPLGVFLKFGC-KVEFWICLLLTIFGYIPGIIYAVYAI 55
MA C +I++AI+LPPLGV LK GC VEF ICL+LTI GYIPGIIYA+Y I
Sbjct: 1 MASNMEVFC-EILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVI 55
>sp|O82232|RC22_ARATH UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana
GN=At2g24040 PE=3 SV=1
Length = 75
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Query: 9 CIDIILAIILPPLGVFLKFGC-KVEFWICLLLTIFGYIPGIIYAVYAI 55
C +I +AI+LPP+GV L+ GC VEF+ICL+LT GY+PGIIYA+YAI
Sbjct: 8 CCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAI 55
>sp|Q4HXT6|PMP3_GIBZE Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3
SV=2
Length = 57
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 39/47 (82%)
Query: 11 DIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
IILAIILPP+GVFL+ GC +F+I +LLTI GYIPGII+A+Y I K
Sbjct: 10 KIILAIILPPVGVFLERGCGADFFINILLTILGYIPGIIHALYIILK 56
>sp|Q9SUI0|RC24_ARATH UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana
GN=At4g30660 PE=2 SV=1
Length = 74
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 11 DIILAIILPPLGV-FLKFGCKVEFWICLLLTIFGYIPGIIYAVYAIT 56
+II+AI+LPPLGV F K C VEF ICL+LTI GY+PGIIYA+Y I
Sbjct: 10 EIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIV 56
>sp|Q22700|YCU3_CAEEL UPF0057 membrane protein T23F2.3 OS=Caenorhabditis elegans
GN=T23F2.3 PE=3 SV=1
Length = 57
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
Query: 8 TCIDI---ILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAI 55
TC DI I A++LPP+GVFL+ GC IC+LLTI GYIPGIIYA Y I
Sbjct: 4 TCTDIPKFICAVLLPPIGVFLEKGCDYHLAICILLTILGYIPGIIYACYVI 54
>sp|Q22701|YCU4_CAEEL UPF0057 membrane protein T23F2.4 OS=Caenorhabditis elegans
GN=T23F2.4 PE=3 SV=2
Length = 57
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Query: 8 TCIDI---ILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAI 55
TC+DI + A++LPP+GVFL+ GC IC+LLTI GYIPGIIYA Y I
Sbjct: 4 TCMDIPKFLFALLLPPVGVFLEKGCTHHLAICILLTILGYIPGIIYACYII 54
>sp|Q871V2|PMP3_NEUCR Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pmp-3 PE=3 SV=1
Length = 57
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 1 MADEGTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
MA + C II+A+ILPPLGVF + GC + +I +LLTI GY+PGI++A+Y I K
Sbjct: 1 MAFTASDIC-KIIVAVILPPLGVFFERGCGADLFINILLTILGYLPGIVHALYIILK 56
>sp|Q6BVN0|PMP3_DEBHA Plasma membrane proteolipid 3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PMP3 PE=3 SV=1
Length = 57
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 18 LPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
LPPLGVFL+ GC FWI ++LTI GYIPGII+A+Y I K
Sbjct: 17 LPPLGVFLERGCASSFWINIVLTILGYIPGIIHALYVILK 56
>sp|P74805|Y1169_SYNY3 UPF0057 membrane protein ssr1169 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=ssr1169 PE=3 SV=2
Length = 54
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 10 IDIILAIILPPLGVFLKFGCKVEFWICLLLTIFG-YIPGIIYAVYAITKN 58
+ II AI+LPPLGVFL+ G +FWI LLLTIFG YI G+++A++ I +
Sbjct: 4 VKIICAILLPPLGVFLQVGIGKDFWINLLLTIFGLYILGLVHAIWVIARE 53
>sp|Q9I5W9|Y567_PSEAE UPF0057 membrane protein PA0567 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0567
PE=3 SV=1
Length = 52
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 19 PPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITKN 58
PPLGVFL+ G FW+ +LLT+ GYIPGI++AVY I K
Sbjct: 13 PPLGVFLQVGFGGAFWLNILLTLLGYIPGIVHAVYIIAKR 52
>sp|Q9C1W4|PMP3_SCHPO Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2
Length = 57
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 11 DIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
+I AIILPPLGVFL+ GC + I +LL GY+PGII+A+Y I K
Sbjct: 10 KVIFAIILPPLGVFLERGCGADVIINILLCCLGYVPGIIHALYIILK 56
>sp|Q9Y068|RIC1_PHYIN Protein Ric1 OS=Phytophthora infestans GN=RIC1 PE=3 SV=1
Length = 57
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 8 TCIDI---ILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITKN 58
TC DI I ++I+PP+GVF + GC + I LLT+ GYIPG+I+AVY + K
Sbjct: 4 TCGDIPRLICSVIIPPVGVFFQVGCTKDLAINCLLTVLGYIPGVIHAVYILIKE 57
>sp|Q4WYA5|PMP3_ASPFU Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=pmp3 PE=3 SV=1
Length = 57
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 11 DIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
I+ AIILPPLGVFL+ GC + I + LTI G+IPGII+A Y I K
Sbjct: 10 KILFAIILPPLGVFLERGCGADLLINICLTILGWIPGIIHAFYIIFK 56
>sp|P0CS18|PMP3_CRYNJ Plasma membrane proteolipid 3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PMP3 PE=3 SV=1
Length = 57
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Query: 8 TCIDI---ILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
TC DI ILAIILPPLGVFL+ GC + I +LLTI GYIPGII+A+Y I K
Sbjct: 4 TCSDIFKIILAIILPPLGVFLERGCGADLLINILLTILGYIPGIIHALYIILK 56
>sp|P0CS19|PMP3_CRYNB Plasma membrane proteolipid 3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PMP3 PE=3
SV=1
Length = 57
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Query: 8 TCIDI---ILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITK 57
TC DI ILAIILPPLGVFL+ GC + I +LLTI GYIPGII+A+Y I K
Sbjct: 4 TCSDIFKIILAIILPPLGVFLERGCGADLLINILLTILGYIPGIIHALYIILK 56
>sp|Q22702|YCU5_CAEEL UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans
GN=T23F2.5 PE=3 SV=1
Length = 57
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 8 TCIDI---ILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAI 55
TC DI + A++LPP+GV+L+ GC I +LLTI GYIPGII+A Y I
Sbjct: 4 TCTDIPKFLCALLLPPIGVWLEKGCTYHLAINILLTILGYIPGIIHACYVI 54
>sp|Q9P824|PMP3_CANAX Plasma membrane proteolipid 3 homolog OS=Candida albicans GN=PMP3
PE=3 SV=1
Length = 55
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 5 GTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITKN 58
+ I++I+AI LPP+ VF+K G WI L+L IF + P I++A+Y + K+
Sbjct: 2 NSEKIIEVIIAIFLPPVAVFMKCGATTPLWINLVLCIFIWFPAILHALYVVLKD 55
>sp|Q75C38|PMP3_ASHGO Plasma membrane proteolipid 3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PMP3
PE=3 SV=1
Length = 55
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 5 GTATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITKN 58
+ +++I+AI LPP+ VFL G VE + LLLTIF + PG++YA+Y + +
Sbjct: 2 NSTKVVNVIIAIFLPPVAVFLARGWGVECIVDLLLTIFFFFPGMLYALYIVLTS 55
>sp|P0AE42|YQAE_ECOLI UPF0057 membrane protein YqaE OS=Escherichia coli (strain K12)
GN=yqaE PE=3 SV=1
Length = 52
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 11 DIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITKN 58
I++ IILPPLGV L G F I +LLT+ GYIPG+I+A + T++
Sbjct: 5 RIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIHAFWVQTRD 52
>sp|P0AE43|YQAE_ECOL6 UPF0057 membrane protein YqaE OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=yqaE PE=3 SV=1
Length = 52
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 11 DIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITKN 58
I++ IILPPLGV L G F I +LLT+ GYIPG+I+A + T++
Sbjct: 5 RIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIHAFWVQTRD 52
>sp|P0AE44|YQAE_ECO57 UPF0057 membrane protein YqaE OS=Escherichia coli O157:H7 GN=yqaE
PE=3 SV=1
Length = 52
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 11 DIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITKN 58
I++ IILPPLGV L G F I +LLT+ GYIPG+I+A + T++
Sbjct: 5 RIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIHAFWVQTRD 52
>sp|P34655|YOT0_CAEEL UPF0057 membrane protein ZK632.10 OS=Caenorhabditis elegans
GN=ZK632.10 PE=3 SV=2
Length = 80
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 28/43 (65%)
Query: 13 ILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAI 55
ILAI LPP+ V L GC + I +LLT G IPGII+A Y I
Sbjct: 8 ILAIFLPPIAVLLDVGCNCDLLINILLTCLGIIPGIIHAWYII 50
>sp|P87284|PMP3_YEAST Plasma membrane proteolipid 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PMP3 PE=1 SV=1
Length = 55
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 6 TATCIDIILAIILPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAITKN 58
+A I+IIL++ LPP+ VFL G + + ++LTI + PG++YA+Y + ++
Sbjct: 3 SAKIINIILSLFLPPVAVFLARGWGTDCIVDIILTILAWFPGMLYALYIVLQD 55
>sp|Q20516|YV31_CAEEL UPF0057 membrane protein F47B7.1 OS=Caenorhabditis elegans
GN=F47B7.1 PE=3 SV=1
Length = 59
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 10 IDIILAIILPPLGVFLK-FGCKVEFWICLLLTIFGYIPGIIYAVY 53
I++ILAI LPPL +F+ C + + ++L F ++P +I+A++
Sbjct: 9 IELILAIFLPPLAIFIHGNDCNMHVAVNIILCFFFFVPAVIHALW 53
>sp|Q07549|SNA4_YEAST Protein SNA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SNA4 PE=1 SV=1
Length = 140
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 13 ILAIILPPLGVFLKFG-CKVEFWICLLLTIFGYIPGIIYAVYAIT 56
I+A PP V L+ G C +F + +LLT+ G++PG+++A Y IT
Sbjct: 17 IVAFFFPPAAVLLRSGPCSSDFLLNVLLTLLGFLPGMLHAFYYIT 61
>sp|Q2HAR0|PMP3_CHAGB Plasma membrane proteolipid 3 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=PMP3 PE=3 SV=1
Length = 53
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 12 IILAIILPPLGVFLKFGCKVE 32
II A+ILPPLGVFL+ GC +
Sbjct: 11 IIFAVILPPLGVFLERGCNSD 31
>sp|Q17638|YAM5_CAEEL UPF0057 membrane protein C04G6.5 OS=Caenorhabditis elegans
GN=C04G6.5 PE=3 SV=1
Length = 59
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 10 IDIILAIILPPLGVFLKFG-CKVEFWICLLLTIFGYIPGIIYAVY 53
I++IL I LPPL ++ C + I ++ + ++PGI+YAVY
Sbjct: 9 IEVILCIFLPPLAIWWHTKECDINVLIDIIFCLLFWLPGILYAVY 53
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.334 0.153 0.504
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,747,295
Number of Sequences: 539616
Number of extensions: 596282
Number of successful extensions: 1346
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1304
Number of HSP's gapped (non-prelim): 41
length of query: 58
length of database: 191,569,459
effective HSP length: 31
effective length of query: 27
effective length of database: 174,841,363
effective search space: 4720716801
effective search space used: 4720716801
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 55 (25.8 bits)