Query 035482
Match_columns 378
No_of_seqs 164 out of 1733
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 04:42:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035482.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035482hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.4 6.5E-10 2.2E-14 100.5 29.5 250 54-351 13-280 (306)
2 4asc_A Kelch repeat and BTB do 99.3 8.2E-10 2.8E-14 100.3 26.3 156 113-286 68-228 (315)
3 2woz_A Kelch repeat and BTB do 99.3 4.6E-09 1.6E-13 95.5 29.4 212 96-349 52-293 (318)
4 2vpj_A Kelch-like protein 12; 99.3 2.9E-09 1E-13 95.9 24.8 211 96-350 58-285 (301)
5 1zgk_A Kelch-like ECH-associat 99.2 2E-09 6.8E-14 97.4 22.7 211 96-350 66-294 (308)
6 2xn4_A Kelch-like protein 2; s 99.2 4.7E-09 1.6E-13 94.6 24.5 211 96-350 57-283 (302)
7 2vpj_A Kelch-like protein 12; 99.1 1.8E-08 6.3E-13 90.6 24.0 195 112-350 31-238 (301)
8 3ii7_A Kelch-like protein 7; p 99.1 1.3E-08 4.6E-13 91.7 21.9 195 111-350 23-232 (306)
9 1zgk_A Kelch-like ECH-associat 99.1 1.1E-08 3.8E-13 92.5 20.2 200 111-350 38-247 (308)
10 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 3.2E-11 1.1E-15 78.6 2.2 42 1-42 9-50 (53)
11 2xn4_A Kelch-like protein 2; s 99.0 3.9E-08 1.3E-12 88.5 21.8 195 112-350 30-236 (302)
12 2uvk_A YJHT; unknown function, 99.0 2.1E-08 7.3E-13 92.5 20.4 178 96-287 15-236 (357)
13 2e31_A FBS1, F-box only protei 99.0 4.6E-11 1.6E-15 105.7 -0.1 48 1-48 51-99 (297)
14 2uvk_A YJHT; unknown function, 98.9 8.6E-07 2.9E-11 81.6 24.7 252 65-350 31-349 (357)
15 2woz_A Kelch repeat and BTB do 98.8 2.9E-07 1E-11 83.4 20.1 201 112-350 24-238 (318)
16 4asc_A Kelch repeat and BTB do 98.8 3.4E-07 1.1E-11 82.9 19.2 170 96-285 94-283 (315)
17 3v7d_B Cell division control p 98.7 1.1E-05 3.7E-10 76.6 27.0 36 2-37 16-51 (464)
18 2zwa_A Leucine carboxyl methyl 98.7 2.1E-06 7.2E-11 86.3 22.3 213 97-351 394-643 (695)
19 2ovr_B FBW7, F-BOX/WD repeat p 98.6 3.4E-05 1.2E-09 72.9 26.0 44 1-44 19-62 (445)
20 1p22_A F-BOX/WD-repeat protein 98.4 1.5E-05 5E-10 75.3 18.8 41 2-42 12-56 (435)
21 1k3i_A Galactose oxidase precu 98.2 0.00013 4.3E-09 73.0 19.5 221 96-350 249-504 (656)
22 1k3i_A Galactose oxidase precu 98.0 0.00016 5.5E-09 72.2 16.2 122 100-239 197-330 (656)
23 2zwa_A Leucine carboxyl methyl 97.9 0.00056 1.9E-08 68.7 19.0 162 100-283 451-639 (695)
24 3l2o_B F-box only protein 4; s 97.7 1.5E-06 5.1E-11 76.0 -2.9 47 2-48 6-52 (312)
25 2ast_B S-phase kinase-associat 97.6 2.6E-05 8.9E-10 70.9 2.6 42 1-42 9-50 (336)
26 2p1m_B Transport inhibitor res 96.9 0.00024 8E-09 69.8 1.1 34 1-34 6-40 (594)
27 3ogk_B Coronatine-insensitive 96.3 0.00094 3.2E-08 65.5 1.3 34 2-35 14-48 (592)
28 2z2n_A Virginiamycin B lyase; 94.9 1.6 5.6E-05 37.4 20.4 193 95-347 104-299 (299)
29 1q7f_A NHL, brain tumor CG1071 90.2 7.9 0.00027 32.9 18.5 192 98-343 86-280 (286)
30 3q7m_A Lipoprotein YFGL, BAMB; 90.2 7 0.00024 35.0 14.4 113 201-349 47-168 (376)
31 3hfq_A Uncharacterized protein 89.3 11 0.00036 33.1 22.9 148 175-351 162-327 (347)
32 3m0c_C LDL receptor, low-densi 89.2 20 0.00069 36.2 21.6 212 98-367 433-656 (791)
33 3e5z_A Putative gluconolactona 89.0 10 0.00035 32.5 18.4 28 322-349 265-292 (296)
34 3q7m_A Lipoprotein YFGL, BAMB; 87.8 15 0.0005 32.8 21.6 188 96-348 99-301 (376)
35 3dsm_A Uncharacterized protein 87.0 15 0.00052 32.2 19.1 210 95-355 89-314 (328)
36 3jro_A Fusion protein of prote 87.0 23 0.0008 35.2 16.9 139 175-344 77-239 (753)
37 1l0q_A Surface layer protein; 86.1 18 0.00061 32.1 19.8 185 102-349 3-195 (391)
38 1ri6_A Putative isomerase YBHE 83.9 20 0.00069 30.8 14.0 141 175-349 15-167 (343)
39 3hfq_A Uncharacterized protein 82.8 23 0.0008 30.8 17.3 124 207-349 50-178 (347)
40 1l0q_A Surface layer protein; 82.6 26 0.00087 31.1 19.7 190 96-348 38-238 (391)
41 4e54_B DNA damage-binding prot 82.5 15 0.00053 33.5 12.4 185 110-346 140-330 (435)
42 3v65_B Low-density lipoprotein 82.5 28 0.00095 31.5 21.0 143 100-277 87-234 (386)
43 3jrp_A Fusion protein of prote 82.4 24 0.00084 30.8 18.9 140 175-345 79-242 (379)
44 3dsm_A Uncharacterized protein 81.0 28 0.00095 30.4 23.1 192 99-347 52-257 (328)
45 3dwl_C Actin-related protein 2 80.9 29 0.00098 30.5 14.1 30 316-345 254-283 (377)
46 3hrp_A Uncharacterized protein 80.9 28 0.00097 31.7 13.4 114 207-349 141-255 (409)
47 3p5b_L Low density lipoprotein 80.7 20 0.00069 32.7 12.3 60 175-239 268-328 (400)
48 3ei3_B DNA damage-binding prot 80.5 30 0.001 30.6 20.0 183 111-346 95-285 (383)
49 2hqs_A Protein TOLB; TOLB, PAL 79.9 35 0.0012 31.0 20.9 184 112-350 159-351 (415)
50 4gga_A P55CDC, cell division c 79.7 35 0.0012 30.8 18.9 147 98-275 114-261 (420)
51 1q7f_A NHL, brain tumor CG1071 78.3 29 0.001 29.2 23.3 204 97-351 37-246 (286)
52 3v65_B Low-density lipoprotein 78.0 39 0.0013 30.5 17.6 149 97-277 124-277 (386)
53 3g4e_A Regucalcin; six bladed 74.9 39 0.0013 28.8 21.6 203 98-350 22-237 (297)
54 3bws_A Protein LP49; two-domai 73.8 50 0.0017 29.6 14.1 110 207-348 133-248 (433)
55 1kv9_A Type II quinohemoprotei 73.6 32 0.0011 33.8 12.1 32 200-237 59-92 (668)
56 1ijq_A LDL receptor, low-densi 72.8 47 0.0016 28.8 12.1 114 95-233 126-239 (316)
57 1npe_A Nidogen, entactin; glyc 72.6 41 0.0014 28.1 12.3 62 207-275 90-153 (267)
58 3jrp_A Fusion protein of prote 72.3 48 0.0016 28.8 16.5 35 316-350 259-295 (379)
59 4aez_A CDC20, WD repeat-contai 71.7 55 0.0019 29.2 19.5 132 111-275 112-248 (401)
60 4e54_B DNA damage-binding prot 71.6 59 0.002 29.5 13.9 32 317-348 404-435 (435)
61 3bws_A Protein LP49; two-domai 71.5 57 0.0019 29.2 20.3 194 98-349 178-396 (433)
62 1kb0_A Quinohemoprotein alcoho 70.9 32 0.0011 33.9 11.4 32 200-237 70-103 (677)
63 1ri6_A Putative isomerase YBHE 70.4 50 0.0017 28.2 27.2 147 175-350 151-317 (343)
64 2ad6_A Methanol dehydrogenase 70.0 50 0.0017 31.7 12.4 120 200-349 55-191 (571)
65 3p5b_L Low density lipoprotein 69.7 65 0.0022 29.2 21.4 214 97-367 120-344 (400)
66 3v64_C Agrin; beta propeller, 69.4 60 0.0021 28.7 21.4 143 100-277 44-191 (349)
67 1yiq_A Quinohemoprotein alcoho 69.0 34 0.0012 33.8 11.2 32 200-237 63-96 (689)
68 2z2n_A Virginiamycin B lyase; 68.3 52 0.0018 27.5 23.0 198 95-352 62-263 (299)
69 2bkl_A Prolyl endopeptidase; m 68.0 94 0.0032 30.4 18.7 143 112-275 202-349 (695)
70 1w6s_A Methanol dehydrogenase 67.2 35 0.0012 33.1 10.6 32 201-237 56-90 (599)
71 2aq5_A Coronin-1A; WD40 repeat 67.2 68 0.0023 28.5 25.5 199 100-350 93-308 (402)
72 1yfq_A Cell cycle arrest prote 66.7 61 0.0021 27.7 18.5 209 97-348 64-287 (342)
73 2hqs_A Protein TOLB; TOLB, PAL 66.5 75 0.0026 28.7 20.2 184 112-350 203-394 (415)
74 3amr_A 3-phytase; beta-propell 66.4 53 0.0018 29.4 10.7 109 103-231 88-209 (355)
75 3hrp_A Uncharacterized protein 66.3 77 0.0026 28.7 22.0 215 95-351 136-362 (409)
76 3v64_C Agrin; beta propeller, 66.1 71 0.0024 28.2 18.7 149 97-277 81-234 (349)
77 3v9f_A Two-component system se 66.0 1.1E+02 0.0037 30.4 22.9 191 111-350 332-531 (781)
78 1ijq_A LDL receptor, low-densi 65.6 67 0.0023 27.8 19.0 133 112-277 10-152 (316)
79 2dg1_A DRP35, lactonase; beta 65.2 66 0.0023 27.6 15.1 113 207-349 55-177 (333)
80 2qc5_A Streptogramin B lactona 65.2 60 0.002 27.1 21.2 198 95-352 67-268 (300)
81 3sjl_D Methylamine dehydrogena 64.6 83 0.0028 28.5 14.0 118 207-356 237-377 (386)
82 3o4h_A Acylamino-acid-releasin 64.5 97 0.0033 29.3 14.3 185 100-349 122-320 (582)
83 1gxr_A ESG1, transducin-like e 63.2 69 0.0024 27.1 19.1 196 97-349 59-261 (337)
84 1flg_A Protein (quinoprotein e 62.1 1.1E+02 0.0039 29.3 14.1 76 200-284 61-143 (582)
85 2qc5_A Streptogramin B lactona 60.8 72 0.0025 26.5 24.2 196 95-350 25-224 (300)
86 1n7d_A LDL receptor, low-densi 60.4 46 0.0016 32.9 10.2 56 175-235 562-617 (699)
87 3u4y_A Uncharacterized protein 59.3 83 0.0028 26.8 21.7 190 100-346 9-210 (331)
88 3hxj_A Pyrrolo-quinoline quino 58.6 85 0.0029 26.7 11.9 34 316-349 257-290 (330)
89 2ojh_A Uncharacterized protein 58.6 75 0.0026 26.1 18.1 138 110-275 20-160 (297)
90 1yr2_A Prolyl oligopeptidase; 57.9 1.5E+02 0.005 29.2 22.5 143 175-349 294-447 (741)
91 3mbr_X Glutamine cyclotransfer 57.9 84 0.0029 26.4 15.8 112 205-351 28-142 (243)
92 3zwl_B Eukaryotic translation 57.4 92 0.0031 26.7 19.3 34 316-349 221-255 (369)
93 1rwi_B Serine/threonine-protei 57.2 80 0.0027 25.9 20.7 192 95-346 72-267 (270)
94 1k8k_C P40, ARP2/3 complex 41 57.1 95 0.0032 26.8 19.0 33 316-348 247-281 (372)
95 3nol_A Glutamine cyclotransfer 56.2 94 0.0032 26.5 13.7 112 205-351 50-164 (262)
96 3e5z_A Putative gluconolactona 55.3 93 0.0032 26.1 24.3 197 103-352 42-255 (296)
97 3s94_A LRP-6, low-density lipo 54.8 1.6E+02 0.0054 28.6 24.3 148 97-277 48-202 (619)
98 2ojh_A Uncharacterized protein 54.3 89 0.003 25.6 20.7 202 96-350 48-265 (297)
99 3lrv_A PRE-mRNA-splicing facto 53.4 85 0.0029 27.2 10.0 97 222-345 148-246 (343)
100 3g4e_A Regucalcin; six bladed 52.9 1.1E+02 0.0036 26.0 15.6 31 207-242 24-54 (297)
101 3no2_A Uncharacterized protein 51.2 1.1E+02 0.0038 25.8 16.6 96 175-283 15-113 (276)
102 3nok_A Glutaminyl cyclase; bet 51.1 1.2E+02 0.004 26.0 12.0 109 205-351 62-173 (268)
103 2ghs_A AGR_C_1268P; regucalcin 50.1 1.2E+02 0.0043 26.0 15.9 56 207-275 60-116 (326)
104 1rwi_B Serine/threonine-protei 50.0 1E+02 0.0036 25.1 16.7 194 95-348 29-227 (270)
105 1npe_A Nidogen, entactin; glyc 49.9 1.1E+02 0.0037 25.3 22.2 149 96-275 43-196 (267)
106 1pjx_A Dfpase, DIISOPROPYLFLUO 49.1 1.2E+02 0.004 25.5 23.5 33 318-350 230-264 (314)
107 4a11_B DNA excision repair pro 48.7 1.4E+02 0.0046 26.1 17.4 32 315-346 247-279 (408)
108 2dg1_A DRP35, lactonase; beta 48.4 1.3E+02 0.0043 25.7 22.8 213 96-351 51-271 (333)
109 3dwl_C Actin-related protein 2 47.6 33 0.0011 30.1 6.4 139 175-344 33-178 (377)
110 1k8k_C P40, ARP2/3 complex 41 47.3 1.4E+02 0.0047 25.7 16.2 137 175-342 30-172 (372)
111 1nir_A Nitrite reductase; hemo 47.0 1.9E+02 0.0065 27.3 19.9 194 98-349 146-361 (543)
112 3sov_A LRP-6, low-density lipo 46.4 1.5E+02 0.005 25.8 13.3 120 95-241 128-248 (318)
113 3vgz_A Uncharacterized protein 46.1 1.4E+02 0.0047 25.4 15.5 143 175-349 69-221 (353)
114 2iwa_A Glutamine cyclotransfer 45.8 1.4E+02 0.0048 25.4 20.6 157 98-290 29-190 (266)
115 1evh_A WH1 domain, protein (ME 44.8 49 0.0017 24.1 5.6 42 112-157 11-52 (112)
116 1qks_A Cytochrome CD1 nitrite 44.4 2.2E+02 0.0074 27.2 21.4 194 100-349 166-379 (567)
117 4g56_B MGC81050 protein; prote 43.7 1.6E+02 0.0056 25.6 15.8 70 98-186 103-172 (357)
118 2p4o_A Hypothetical protein; p 43.5 1.5E+02 0.0052 25.1 26.0 109 99-234 41-149 (306)
119 1ddw_A GLGF-domain protein hom 43.4 69 0.0024 23.6 6.3 40 112-157 11-51 (120)
120 1kb0_A Quinohemoprotein alcoho 42.4 2.5E+02 0.0086 27.4 18.8 119 99-238 76-207 (677)
121 3fm0_A Protein CIAO1; WDR39,SG 42.3 1.7E+02 0.0057 25.3 17.9 143 175-348 38-186 (345)
122 3mmy_A MRNA export factor; mRN 41.6 1.6E+02 0.0056 25.0 18.9 33 316-348 276-309 (368)
123 2vdu_B TRNA (guanine-N(7)-)-me 40.9 2E+02 0.0069 25.8 22.5 140 175-347 220-397 (450)
124 3i2n_A WD repeat-containing pr 40.5 1.7E+02 0.0058 24.8 20.6 30 316-345 324-355 (357)
125 3no2_A Uncharacterized protein 40.4 1.6E+02 0.0056 24.7 18.9 109 101-240 5-116 (276)
126 2fp8_A Strictosidine synthase; 40.0 1.8E+02 0.006 24.9 13.2 29 207-240 29-57 (322)
127 3sov_A LRP-6, low-density lipo 39.4 1.9E+02 0.0064 25.0 19.0 63 207-277 90-154 (318)
128 2hz6_A Endoplasmic reticulum t 39.1 7.9 0.00027 34.9 0.6 31 201-237 3-35 (369)
129 3m0c_C LDL receptor, low-densi 38.6 3.2E+02 0.011 27.4 22.0 150 96-276 478-631 (791)
130 3iuj_A Prolyl endopeptidase; h 37.8 2.9E+02 0.01 26.8 22.2 143 175-350 259-412 (693)
131 3v9f_A Two-component system se 37.8 3.1E+02 0.011 27.0 25.0 142 176-350 470-618 (781)
132 3fm0_A Protein CIAO1; WDR39,SG 37.7 2E+02 0.0068 24.8 18.4 181 110-341 36-223 (345)
133 1jmx_B Amine dehydrogenase; ox 36.4 2E+02 0.0067 24.3 11.6 29 319-349 153-181 (349)
134 3mbr_X Glutamine cyclotransfer 36.3 1.9E+02 0.0065 24.2 17.5 144 175-352 43-189 (243)
135 1egx_A VAsp, vasodilator-stimu 35.9 69 0.0024 23.4 5.3 43 112-157 11-53 (115)
136 2lyd_A Decapping protein 1; DC 35.8 62 0.0021 24.4 5.1 29 326-354 30-58 (134)
137 3vl1_A 26S proteasome regulato 35.6 2.3E+02 0.0077 24.9 19.2 101 222-343 312-419 (420)
138 3nol_A Glutamine cyclotransfer 35.3 2.1E+02 0.0071 24.3 16.1 144 175-352 65-211 (262)
139 3dr2_A Exported gluconolactona 35.2 2E+02 0.0069 24.2 22.4 199 103-352 59-276 (305)
140 1q67_A Decapping protein invol 34.0 58 0.002 26.6 4.8 29 327-355 37-65 (231)
141 3u4y_A Uncharacterized protein 33.9 2.1E+02 0.0072 24.0 12.8 107 208-349 10-123 (331)
142 1i2h_A PSD-ZIP45(homer-1C/VESL 33.6 1E+02 0.0036 24.2 6.2 40 112-157 16-56 (168)
143 2aq5_A Coronin-1A; WD40 repeat 33.3 2.5E+02 0.0085 24.6 21.8 152 98-274 43-206 (402)
144 1nir_A Nitrite reductase; hemo 33.0 3.1E+02 0.011 25.7 18.2 105 222-347 345-462 (543)
145 2iwa_A Glutamine cyclotransfer 32.7 2.3E+02 0.0078 24.0 15.6 109 208-350 32-143 (266)
146 4aez_A CDC20, WD repeat-contai 32.2 2.6E+02 0.0089 24.5 19.2 35 316-350 306-343 (401)
147 3scy_A Hypothetical bacterial 31.7 2.5E+02 0.0084 24.1 25.7 114 207-350 221-346 (361)
148 2kwv_A RAD30 homolog B, DNA po 31.7 26 0.00088 20.9 1.8 16 2-17 22-37 (48)
149 1flg_A Protein (quinoprotein e 31.6 3E+02 0.01 26.2 10.6 80 175-264 466-548 (582)
150 2dk7_A Transcription elongatio 31.5 43 0.0015 22.2 3.1 19 327-345 23-41 (73)
151 1w6s_A Methanol dehydrogenase 30.5 3E+02 0.01 26.5 10.3 78 175-263 453-534 (599)
152 3vgz_A Uncharacterized protein 28.8 2.6E+02 0.009 23.5 27.5 200 99-349 99-309 (353)
153 3mkq_A Coatomer beta'-subunit; 28.3 4.2E+02 0.014 25.8 17.0 56 111-188 34-90 (814)
154 2be1_A Serine/threonine-protei 28.2 91 0.0031 27.7 5.7 55 175-235 67-133 (339)
155 3scy_A Hypothetical bacterial 27.6 2.9E+02 0.0099 23.6 18.0 94 176-276 28-130 (361)
156 1kv9_A Type II quinohemoprotei 27.5 4.3E+02 0.015 25.6 16.1 64 175-238 127-195 (668)
157 1n7d_A LDL receptor, low-densi 27.3 4.5E+02 0.015 25.7 15.3 149 96-275 460-612 (699)
158 4a0p_A LRP6, LRP-6, low-densit 27.1 4.3E+02 0.015 25.5 24.9 135 112-277 15-155 (628)
159 4a11_B DNA excision repair pro 26.9 3E+02 0.01 23.6 17.8 33 315-347 336-369 (408)
160 3sre_A PON1, serum paraoxonase 26.7 3.4E+02 0.012 24.1 17.1 63 111-185 82-149 (355)
161 3lrv_A PRE-mRNA-splicing facto 26.3 3E+02 0.01 23.4 17.4 148 95-275 89-244 (343)
162 3odt_A Protein DOA1; ubiquitin 25.9 2.7E+02 0.0094 22.8 22.0 33 316-348 187-219 (313)
163 4a2l_A BT_4663, two-component 25.7 4.9E+02 0.017 25.6 23.5 196 99-350 415-621 (795)
164 3sfz_A APAF-1, apoptotic pepti 25.3 5.9E+02 0.02 26.4 21.5 205 97-350 623-835 (1249)
165 2fp8_A Strictosidine synthase; 24.8 3.2E+02 0.011 23.1 19.1 34 319-352 234-278 (322)
166 3k26_A Polycomb protein EED; W 23.9 3.3E+02 0.011 23.0 18.0 65 101-186 85-149 (366)
167 1ugj_A Riken cDNA 2310057J16 p 23.8 1.6E+02 0.0056 22.3 5.5 74 102-189 57-133 (141)
168 4a2l_A BT_4663, two-component 23.8 5.3E+02 0.018 25.3 24.0 34 316-350 454-487 (795)
169 2qkl_A DCP1 protein, SPBC3B9.2 23.0 31 0.0011 25.8 1.4 29 327-355 26-54 (127)
170 1jmx_B Amine dehydrogenase; ox 23.0 3.3E+02 0.011 22.8 10.5 61 206-274 9-71 (349)
171 1pby_B Quinohemoprotein amine 22.6 3.3E+02 0.011 22.6 11.5 30 319-348 285-315 (337)
172 3mkq_A Coatomer beta'-subunit; 22.3 5.5E+02 0.019 24.9 24.4 190 97-348 63-264 (814)
173 3vl1_A 26S proteasome regulato 22.1 3.9E+02 0.013 23.2 23.7 107 98-235 106-215 (420)
174 4hw6_A Hypothetical protein, I 21.8 4.5E+02 0.015 23.8 14.7 118 199-349 139-266 (433)
175 4g56_B MGC81050 protein; prote 21.1 4E+02 0.014 23.0 18.0 29 316-344 314-344 (357)
176 3dr2_A Exported gluconolactona 21.1 3.7E+02 0.013 22.5 14.5 107 112-242 169-277 (305)
177 2pm9_A Protein WEB1, protein t 20.6 4.1E+02 0.014 22.9 16.2 232 64-345 88-339 (416)
178 1got_B GT-beta; complex (GTP-b 20.3 4E+02 0.014 22.6 21.1 95 222-346 163-260 (340)
179 4gqb_B Methylosome protein 50; 20.2 4.2E+02 0.014 22.8 21.6 195 98-349 91-295 (344)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.40 E-value=6.5e-10 Score=100.47 Aligned_cols=250 Identities=10% Similarity=0.005 Sum_probs=150.9
Q ss_pred EEEEEeccCCCCcEEEEecCCCCcCCcceeeeccCCCCc-eeEEeeeCceEEEeecC---CCceEEEEcccccceeeCCC
Q 035482 54 CLILHCDYPIRNQLYSFELSSRDEDNQTVHQIRVPALPE-FDVVGSCKGLLCLCDSS---TKNRLYVYNPFTRNYVELPK 129 (378)
Q Consensus 54 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~GLl~~~~~~---~~~~~~V~NP~T~~~~~LP~ 129 (378)
.++++......+.++.+|.... .|..++....++ ..-.+..+|.|++..+. ....+.++||.|++|..+|+
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~-----~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDY-----SWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTT-----EEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred eEEEEeCCCCCceEEEecCCCC-----CEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 4555443322455666675422 233332111121 12234567777665431 23578999999999999987
Q ss_pred CCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEeCcccceeecCCCcEEECCe
Q 035482 130 STEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGR 209 (378)
Q Consensus 130 ~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~ 209 (378)
.+..+.....+.+ +-+++.+....... .....+++|+..+++|+.++.+|... ....++.++|.
T Consensus 88 ~p~~r~~~~~~~~-------~~~iyv~GG~~~~~--------~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~ 151 (306)
T 3ii7_A 88 PPTPRDSLAACAA-------EGKIYTSGGSEVGN--------SALYLFECYDTRTESWHTKPSMLTQR-CSHGMVEANGL 151 (306)
T ss_dssp CSSCCBSCEEEEE-------TTEEEEECCBBTTB--------SCCCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTE
T ss_pred CCccccceeEEEE-------CCEEEEECCCCCCC--------cEeeeEEEEeCCCCceEeCCCCcCCc-ceeEEEEECCE
Confidence 6654433222222 12465554432111 12367999999999999998776543 34556788999
Q ss_pred EEEEeccCCCCC----CcEEEEEECCCceEeEEc-CCCccCcceeEEEEeCCeEEEEEeCCCCc---eEEEEeeCCCCCc
Q 035482 210 LHWCTWPRYRGP----SRLLISFDIADEQFRVVE-KPDELHRIHYDLVNLGGCLSAAVPCSSGK---EIWVMKEYDVKES 281 (378)
Q Consensus 210 lyw~~~~~~~~~----~~~il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~G~L~~v~~~~~~~---~iW~l~~~~~~~~ 281 (378)
+|.+........ ...+.+||+.+++|+.++ +|. ......++.++|+|+++....... ++|+++-. ...
T Consensus 152 iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~--~~~ 227 (306)
T 3ii7_A 152 IYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIE--ARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIK--LNE 227 (306)
T ss_dssp EEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEECCEETTEEBCCEEEEETT--TTE
T ss_pred EEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccc--hhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCC--CCc
Confidence 999987532222 567999999999999985 343 233456777899999886543322 88888752 468
Q ss_pred eeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc------CCeEEEEeCCCCcEEEEEE
Q 035482 282 WIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK------CRALVSYNPRNEMFKDLLL 351 (378)
Q Consensus 282 W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~------~~~l~~yd~~t~~~~~v~~ 351 (378)
|+..-.+.. ++ ...... .-++.+++..+ ...+..||+++++|+.+.-
T Consensus 228 W~~~~~~p~--~r-------------------~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 228 WKMVSPMPW--KG-------------------VTVKCA--AVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp EEECCCCSC--CB-------------------SCCEEE--EETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCC--Cc-------------------cceeEE--EECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 987632211 10 001111 12566766654 1468999999999999863
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.34 E-value=8.2e-10 Score=100.30 Aligned_cols=156 Identities=8% Similarity=0.012 Sum_probs=105.5
Q ss_pred eEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEeCc
Q 035482 113 RLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSLGQ 192 (378)
Q Consensus 113 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~ 192 (378)
.++++||.|++|..+|+.+..+.....+.+ +-+++.+.......+. .....+++|+..+++|+.++.
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-------~~~lyv~GG~~~~~~~------~~~~~~~~~d~~~~~W~~~~~ 134 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-------LNSIYVVGGREIKDGE------RCLDSVMCYDRLSFKWGESDP 134 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESCEEEEE-------TTEEEEECCEESSTTC------CBCCCEEEEETTTTEEEECCC
T ss_pred ceEEecCCCCeEEECCCCCcchhceeEEEE-------CCEEEEEeCCcCCCCC------cccceEEEECCCCCcEeECCC
Confidence 388999999999999886654322222211 1256666543321100 123678999999999999987
Q ss_pred ccceeecCCCcEEECCeEEEEecc-CCCCCCcEEEEEECCCceEeEEc-CCCccCcceeEEEEeCCeEEEEEeCCCCc--
Q 035482 193 VNYHMLEAPSQVLVNGRLHWCTWP-RYRGPSRLLISFDIADEQFRVVE-KPDELHRIHYDLVNLGGCLSAAVPCSSGK-- 268 (378)
Q Consensus 193 ~p~~~~~~~~~v~~~G~lyw~~~~-~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~G~L~~v~~~~~~~-- 268 (378)
+|... ....++.++|.+|.+... ........+.+||+.+++|+.++ +|. .+.....+..+|+|+++.......
T Consensus 135 ~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~ 211 (315)
T 4asc_A 135 LPYVV-YGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQT--ARSLFGATVHDGRIIVAAGVTDTGLT 211 (315)
T ss_dssp CSSCC-BSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEEEEEECSSSEE
T ss_pred CCCcc-cceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCC--chhceEEEEECCEEEEEeccCCCCcc
Confidence 66543 345667899999999876 22333568999999999999984 443 233446677899999987654332
Q ss_pred -eEEEEeeCCCCCceeeEE
Q 035482 269 -EIWVMKEYDVKESWIKEY 286 (378)
Q Consensus 269 -~iW~l~~~~~~~~W~~~~ 286 (378)
++|+.+-. ...|+..-
T Consensus 212 ~~~~~yd~~--~~~W~~~~ 228 (315)
T 4asc_A 212 SSAEVYSIT--DNKWAPFE 228 (315)
T ss_dssp EEEEEEETT--TTEEEEEC
T ss_pred ceEEEEECC--CCeEEECC
Confidence 88888652 56898764
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.31 E-value=4.6e-09 Score=95.47 Aligned_cols=212 Identities=8% Similarity=0.063 Sum_probs=133.7
Q ss_pred EeeeCceEEEeecC-----C-----CceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCC
Q 035482 96 VGSCKGLLCLCDSS-----T-----KNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGN 165 (378)
Q Consensus 96 ~~s~~GLl~~~~~~-----~-----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~ 165 (378)
++..+|.|++..+. . ...++++||.|++|..+|+.+..+.......+ +-+++.+........
T Consensus 52 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-------~~~iyv~GG~~~~~~- 123 (318)
T 2woz_A 52 IVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-------DDKIYVVAGKDLQTE- 123 (318)
T ss_dssp EECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-------TTEEEEEEEEBTTTC-
T ss_pred EEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-------CCEEEEEcCccCCCC-
Confidence 45567777655431 0 12388999999999999886654432222222 125666654432111
Q ss_pred cccccCCCceEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccC-CCCCCcEEEEEECCCceEeEEc-CCCc
Q 035482 166 HRYYRGYGKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPR-YRGPSRLLISFDIADEQFRVVE-KPDE 243 (378)
Q Consensus 166 ~~~~~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~-~~~~~~~il~fD~~~e~~~~i~-lP~~ 243 (378)
.....+++|+..+++|+.+..+|... ....++..+|.+|.+.... .......+.+||+.+++|+.++ +|..
T Consensus 124 ------~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 196 (318)
T 2woz_A 124 ------ASLDSVLCYDPVAAKWSEVKNLPIKV-YGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTP 196 (318)
T ss_dssp ------CEEEEEEEEETTTTEEEEECCCSSCE-ESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSC
T ss_pred ------cccceEEEEeCCCCCEeECCCCCCcc-cccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCC
Confidence 12367999999999999998776543 3445677999999998652 1223457999999999999984 3432
Q ss_pred cCcceeEEEEeCCeEEEEEeCCCCc---eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEE
Q 035482 244 LHRIHYDLVNLGGCLSAAVPCSSGK---EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLC 320 (378)
Q Consensus 244 ~~~~~~~l~~~~G~L~~v~~~~~~~---~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (378)
+.....+..+|+|+++....... ++|+.+-. ...|++...+.. ++ ....+
T Consensus 197 --r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p~--~r--------------------~~~~~- 249 (318)
T 2woz_A 197 --RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLK--TNKWEVMTEFPQ--ER--------------------SSISL- 249 (318)
T ss_dssp --CBSCEEEEETTEEEEEEEEETTEEEEEEEEEETT--TCCEEECCCCSS--CC--------------------BSCEE-
T ss_pred --cccceEEEECCEEEEEcCcCCCCccceEEEEECC--CCeEEECCCCCC--cc--------------------cceEE-
Confidence 23345677899999987543332 78887642 568987643211 10 00011
Q ss_pred EeeCCcEEEEEc---------------CCeEEEEeCCCCcEEEE
Q 035482 321 LLKNGEILLEYK---------------CRALVSYNPRNEMFKDL 349 (378)
Q Consensus 321 ~~~~g~vl~~~~---------------~~~l~~yd~~t~~~~~v 349 (378)
+.-++.+++..+ ...+..||+++++|+++
T Consensus 250 ~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 250 VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 112556665532 14588999999999999
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.25 E-value=2.9e-09 Score=95.85 Aligned_cols=211 Identities=9% Similarity=0.069 Sum_probs=135.2
Q ss_pred EeeeCceEEEeecC----CCceEEEEcccccc---eeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCccc
Q 035482 96 VGSCKGLLCLCDSS----TKNRLYVYNPFTRN---YVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRY 168 (378)
Q Consensus 96 ~~s~~GLl~~~~~~----~~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~ 168 (378)
.+..+|.|++..+. ....++++||.|++ |..+|+.+..+.....+. ++ -+++.+......
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~-----~~lyv~GG~~~~------ 124 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LG-----DMIYVSGGFDGS------ 124 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ET-----TEEEEECCBCSS------
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--EC-----CEEEEEcccCCC------
Confidence 34457777655331 22579999999999 999988665443322222 11 256655433211
Q ss_pred ccCCCceEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEc-CCCccCcc
Q 035482 169 YRGYGKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVE-KPDELHRI 247 (378)
Q Consensus 169 ~~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~ 247 (378)
.....+++|+..+++|+.++.+|... ....++.++|.+|.+...........+.+||+.+++|..++ +|.. ..
T Consensus 125 ---~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~ 198 (301)
T 2vpj_A 125 ---RRHTSMERYDPNIDQWSMLGDMQTAR-EGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK--RS 198 (301)
T ss_dssp ---CBCCEEEEEETTTTEEEEEEECSSCC-BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC--CB
T ss_pred ---cccceEEEEcCCCCeEEECCCCCCCc-ccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc--cc
Confidence 11257999999999999987666433 34566788999999987532233467999999999999984 3432 23
Q ss_pred eeEEEEeCCeEEEEEeCCCC--c-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeC
Q 035482 248 HYDLVNLGGCLSAAVPCSSG--K-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKN 324 (378)
Q Consensus 248 ~~~l~~~~G~L~~v~~~~~~--~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (378)
...++..+|+|+++...... . ++|.++-. ...|++...+.. ++ ..... + .-+
T Consensus 199 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~--~r-------------------~~~~~-~-~~~ 253 (301)
T 2vpj_A 199 GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIR--TDSWTTVTSMTT--PR-------------------CYVGA-T-VLR 253 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSSBCCCEEEEETT--TTEEEEECCCSS--CC-------------------BSCEE-E-EET
T ss_pred cceEEEECCEEEEEeCCCCCcccceEEEEeCC--CCcEEECCCCCC--cc-------------------cceeE-E-EEC
Confidence 44677789999988754332 2 88888752 468987642211 10 00111 1 125
Q ss_pred CcEEEEEcC------CeEEEEeCCCCcEEEEE
Q 035482 325 GEILLEYKC------RALVSYNPRNEMFKDLL 350 (378)
Q Consensus 325 g~vl~~~~~------~~l~~yd~~t~~~~~v~ 350 (378)
+.+++..+. ..+..||+++++|+.+.
T Consensus 254 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 254 GRLYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp TEEEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred CEEEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 666666431 45899999999999985
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.23 E-value=2e-09 Score=97.44 Aligned_cols=211 Identities=13% Similarity=0.110 Sum_probs=135.5
Q ss_pred EeeeCceEEEeecC--------CCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcc
Q 035482 96 VGSCKGLLCLCDSS--------TKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHR 167 (378)
Q Consensus 96 ~~s~~GLl~~~~~~--------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~ 167 (378)
++..+|.|++..+. ....+.++||.|++|..+|+.+..+.......+ + -+++.+......
T Consensus 66 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~-----~~iyv~GG~~~~----- 133 (308)
T 1zgk_A 66 GCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--D-----GHIYAVGGSHGC----- 133 (308)
T ss_dssp EEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--T-----TEEEEECCEETT-----
T ss_pred EEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--C-----CEEEEEcCCCCC-----
Confidence 34557777665432 124689999999999999886654433222221 1 256665443221
Q ss_pred cccCCCceEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEc-CCCccCc
Q 035482 168 YYRGYGKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVE-KPDELHR 246 (378)
Q Consensus 168 ~~~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~ 246 (378)
.....+++|+..+++|+.+..+|... ....++.++|.+|.+...........+.+||+.+++|..++ +|.. +
T Consensus 134 ----~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r 206 (308)
T 1zgk_A 134 ----IHHNSVERYEPERDEWHLVAPMLTRR-IGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI--R 206 (308)
T ss_dssp ----EECCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSC--C
T ss_pred ----cccccEEEECCCCCeEeECCCCCccc-cceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCc--c
Confidence 01256899999999999998766543 34466788999999987633333567999999999999884 3432 2
Q ss_pred ceeEEEEeCCeEEEEEeCCCC--c-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEee
Q 035482 247 IHYDLVNLGGCLSAAVPCSSG--K-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLK 323 (378)
Q Consensus 247 ~~~~l~~~~G~L~~v~~~~~~--~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (378)
.....+.++|+|+++...... . ++|+++-. ...|++...+.. ++ .....+. -
T Consensus 207 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~--~r-------------------~~~~~~~--~ 261 (308)
T 1zgk_A 207 SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVE--TETWTFVAPMKH--RR-------------------SALGITV--H 261 (308)
T ss_dssp BSCEEEEETTEEEEECCBCSSSBCCCEEEEETT--TTEEEECCCCSS--CC-------------------BSCEEEE--E
T ss_pred ccceEEEECCEEEEEeCCCCCCccceEEEEeCC--CCcEEECCCCCC--Cc-------------------cceEEEE--E
Confidence 334567779999988754332 2 88988753 468987542211 10 0011111 2
Q ss_pred CCcEEEEEc------CCeEEEEeCCCCcEEEEE
Q 035482 324 NGEILLEYK------CRALVSYNPRNEMFKDLL 350 (378)
Q Consensus 324 ~g~vl~~~~------~~~l~~yd~~t~~~~~v~ 350 (378)
++.|++..+ ...+..||+++++|+++.
T Consensus 262 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 262 QGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred CCEEEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 566766643 245899999999999985
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.22 E-value=4.7e-09 Score=94.58 Aligned_cols=211 Identities=13% Similarity=0.139 Sum_probs=135.2
Q ss_pred EeeeCceEEEeecC----CCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccC
Q 035482 96 VGSCKGLLCLCDSS----TKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRG 171 (378)
Q Consensus 96 ~~s~~GLl~~~~~~----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 171 (378)
++..+|.|++..+. ....+.++||.|++|..+|+.+..+.....+.+ + -+++.+...... .
T Consensus 57 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~-----~~iyv~GG~~~~-~------- 121 (302)
T 2xn4_A 57 MVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--N-----GLLYAVGGFDGS-T------- 121 (302)
T ss_dssp EEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T-----TEEEEEEEECSS-C-------
T ss_pred EEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--C-----CEEEEEcCCCCC-c-------
Confidence 34457777665431 125689999999999999886654433222221 1 255555543221 1
Q ss_pred CCceEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCC--CCcEEEEEECCCceEeEEc-CCCccCcce
Q 035482 172 YGKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRG--PSRLLISFDIADEQFRVVE-KPDELHRIH 248 (378)
Q Consensus 172 ~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~--~~~~il~fD~~~e~~~~i~-lP~~~~~~~ 248 (378)
....+++|+..++.|+.+..+|... ....++.++|.+|.+....... ....+.+||+.+++|..++ +|.. ...
T Consensus 122 -~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~ 197 (302)
T 2xn4_A 122 -GLSSVEAYNIKSNEWFHVAPMNTRR-SSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR--RSG 197 (302)
T ss_dssp -EEEEEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC--CBS
T ss_pred -cCceEEEEeCCCCeEeecCCCCCcc-cCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc--ccc
Confidence 1267999999999999998766543 3445678899999997652211 1457999999999999984 4432 233
Q ss_pred eEEEEeCCeEEEEEeCCCCc---eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCC
Q 035482 249 YDLVNLGGCLSAAVPCSSGK---EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNG 325 (378)
Q Consensus 249 ~~l~~~~G~L~~v~~~~~~~---~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 325 (378)
..++.++|+|+++....... ++|..+-. ...|+....+.. ++ .... ++ .-++
T Consensus 198 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~~--~r-------------------~~~~-~~-~~~~ 252 (302)
T 2xn4_A 198 AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPT--TNAWRQVADMNM--CR-------------------RNAG-VC-AVNG 252 (302)
T ss_dssp CEEEEETTEEEEECCBSSSSBCCCEEEEETT--TTEEEEECCCSS--CC-------------------BSCE-EE-EETT
T ss_pred ccEEEECCEEEEECCCCCCcccceEEEEeCC--CCCEeeCCCCCC--cc-------------------ccCe-EE-EECC
Confidence 46777899999987543322 88988752 468987642211 10 0011 11 1256
Q ss_pred cEEEEEcC------CeEEEEeCCCCcEEEEE
Q 035482 326 EILLEYKC------RALVSYNPRNEMFKDLL 350 (378)
Q Consensus 326 ~vl~~~~~------~~l~~yd~~t~~~~~v~ 350 (378)
.|++..+. ..+..||+++++|+.+.
T Consensus 253 ~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 253 LLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp EEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred EEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 67666431 34899999999999985
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.14 E-value=1.8e-08 Score=90.56 Aligned_cols=195 Identities=15% Similarity=0.122 Sum_probs=126.2
Q ss_pred ceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCC---eE
Q 035482 112 NRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQE---WR 188 (378)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~---W~ 188 (378)
..++++||.|++|..+|+.+..+.....+. .+ -+++.+...... .....+++|+..++. |+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~-----~~l~v~GG~~~~---------~~~~~~~~~d~~~~~~~~W~ 94 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LH-----DRIYVIGGYDGR---------SRLSSVECLDYTADEDGVWY 94 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ET-----TEEEEECCBCSS---------CBCCCEEEEETTCCTTCCCE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--EC-----CEEEEEcCCCCC---------ccCceEEEEECCCCCCCeeE
Confidence 578999999999999987655432222221 11 245555433211 112578999999999 99
Q ss_pred EeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEc-CCCccCcceeEEEEeCCeEEEEEeCCCC
Q 035482 189 SLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVE-KPDELHRIHYDLVNLGGCLSAAVPCSSG 267 (378)
Q Consensus 189 ~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~G~L~~v~~~~~~ 267 (378)
.+..+|... ....++.++|.+|.+...........+..||+.+.+|..++ +|.. ......+..+|+|+++......
T Consensus 95 ~~~~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 95 SVAPMNVRR-GLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA--REGAGLVVASGVIYCLGGYDGL 171 (301)
T ss_dssp EECCCSSCC-BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC--CBSCEEEEETTEEEEECCBCSS
T ss_pred ECCCCCCCc-cceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC--cccceEEEECCEEEEECCCCCC
Confidence 998766543 34566788999999987533333468999999999999984 4432 2334566779999888654332
Q ss_pred --c-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc------CCeEEE
Q 035482 268 --K-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK------CRALVS 338 (378)
Q Consensus 268 --~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~------~~~l~~ 338 (378)
. ++|+.+-. ...|++.-.+ |... .... ++.-++.|++..+ ...+..
T Consensus 172 ~~~~~~~~~d~~--~~~W~~~~~~----p~~r-----------------~~~~--~~~~~~~i~v~GG~~~~~~~~~v~~ 226 (301)
T 2vpj_A 172 NILNSVEKYDPH--TGHWTNVTPM----ATKR-----------------SGAG--VALLNDHIYVVGGFDGTAHLSSVEA 226 (301)
T ss_dssp CBCCCEEEEETT--TTEEEEECCC----SSCC-----------------BSCE--EEEETTEEEEECCBCSSSBCCCEEE
T ss_pred cccceEEEEeCC--CCcEEeCCCC----Cccc-----------------ccce--EEEECCEEEEEeCCCCCcccceEEE
Confidence 2 88888752 4689876322 2110 0011 1112566666643 245899
Q ss_pred EeCCCCcEEEEE
Q 035482 339 YNPRNEMFKDLL 350 (378)
Q Consensus 339 yd~~t~~~~~v~ 350 (378)
||+++++|+++.
T Consensus 227 yd~~~~~W~~~~ 238 (301)
T 2vpj_A 227 YNIRTDSWTTVT 238 (301)
T ss_dssp EETTTTEEEEEC
T ss_pred EeCCCCcEEECC
Confidence 999999999986
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.11 E-value=1.3e-08 Score=91.75 Aligned_cols=195 Identities=10% Similarity=0.077 Sum_probs=126.2
Q ss_pred CceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEe
Q 035482 111 KNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSL 190 (378)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~ 190 (378)
...+.++||.|++|..+++.+..+.....+.+ + + +++.+.... . .....+++|+..+++|+.+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~----~-~lyv~GG~~--~--------~~~~~~~~~d~~~~~W~~~ 85 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--D----N-VVYILGGSQ--L--------FPIKRMDCYNVVKDSWYSK 85 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--T----T-EEEEECCBS--S--------SBCCEEEEEETTTTEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEE--C----C-EEEEEeCCC--C--------CCcceEEEEeCCCCeEEEC
Confidence 46899999999999999886654433222221 1 2 355554322 1 1236799999999999998
Q ss_pred CcccceeecCCCcEEECCeEEEEeccC-CCCCCcEEEEEECCCceEeEEc-CCCccCcceeEEEEeCCeEEEEEeCCC--
Q 035482 191 GQVNYHMLEAPSQVLVNGRLHWCTWPR-YRGPSRLLISFDIADEQFRVVE-KPDELHRIHYDLVNLGGCLSAAVPCSS-- 266 (378)
Q Consensus 191 ~~~p~~~~~~~~~v~~~G~lyw~~~~~-~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~G~L~~v~~~~~-- 266 (378)
..+|... ....++.++|.+|.+.... .......+.+||+.+.+|..++ +|.. ......+.++|+|+++.....
T Consensus 86 ~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 86 LGPPTPR-DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ--RCSHGMVEANGLIYVCGGSLGNN 162 (306)
T ss_dssp ECCSSCC-BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCEESCT
T ss_pred CCCCccc-cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC--cceeEEEEECCEEEEECCCCCCC
Confidence 8766433 3456678899999998753 2233467999999999999984 4432 233456778999988864321
Q ss_pred C----c-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc------CCe
Q 035482 267 G----K-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK------CRA 335 (378)
Q Consensus 267 ~----~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~------~~~ 335 (378)
. . ++|..+-. ...|++.-.+ |... .... +. .-++.|++..+ ...
T Consensus 163 ~~~~~~~~~~~yd~~--~~~W~~~~~~----p~~r-----------------~~~~-~~-~~~~~i~v~GG~~~~~~~~~ 217 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPA--TETWTELCPM----IEAR-----------------KNHG-LV-FVKDKIFAVGGQNGLGGLDN 217 (306)
T ss_dssp TTCEECCCEEEEETT--TTEEEEECCC----SSCC-----------------BSCE-EE-EETTEEEEECCEETTEEBCC
T ss_pred CcccccceEEEeCCC--CCeEEECCCc----cchh-----------------hcce-EE-EECCEEEEEeCCCCCCCCce
Confidence 1 2 78888652 4689876422 2110 0011 11 12556666532 245
Q ss_pred EEEEeCCCCcEEEEE
Q 035482 336 LVSYNPRNEMFKDLL 350 (378)
Q Consensus 336 l~~yd~~t~~~~~v~ 350 (378)
+..||+++++|+.+.
T Consensus 218 ~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 218 VEYYDIKLNEWKMVS 232 (306)
T ss_dssp EEEEETTTTEEEECC
T ss_pred EEEeeCCCCcEEECC
Confidence 899999999999985
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.09 E-value=1.1e-08 Score=92.51 Aligned_cols=200 Identities=10% Similarity=0.030 Sum_probs=125.1
Q ss_pred CceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEe
Q 035482 111 KNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSL 190 (378)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~ 190 (378)
...+.++||.|++|..+++.+..+.....+.+ +-+|+.+......... ......+++|+..+++|+.+
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-------~~~lyv~GG~~~~~~~-----~~~~~~~~~~d~~~~~W~~~ 105 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-------GGLLYAVGGRNNSPDG-----NTDSSALDCYNPMTNQWSPC 105 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-------TTEEEEECCEEEETTE-----EEECCCEEEEETTTTEEEEC
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEEE-------CCEEEEECCCcCCCCC-----CeecceEEEECCCCCeEeEC
Confidence 35789999999999999876654432222211 1245555432100000 00124689999999999999
Q ss_pred CcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEc-CCCccCcceeEEEEeCCeEEEEEeCCCC--
Q 035482 191 GQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVE-KPDELHRIHYDLVNLGGCLSAAVPCSSG-- 267 (378)
Q Consensus 191 ~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~G~L~~v~~~~~~-- 267 (378)
..+|... .....+.++|.+|.+...........+..||+.+++|..++ +|.. +.....+.++|+|+++......
T Consensus 106 ~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~ 182 (308)
T 1zgk_A 106 APMSVPR-NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR--RIGVGVAVLNRLLYAVGGFDGTNR 182 (308)
T ss_dssp CCCSSCC-BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC--CBSCEEEEETTEEEEECCBCSSCB
T ss_pred CCCCcCc-cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc--ccceEEEEECCEEEEEeCCCCCCc
Confidence 8766533 34556778999999976522222357999999999999984 4432 2334566779999988654332
Q ss_pred c-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc------CCeEEEEe
Q 035482 268 K-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK------CRALVSYN 340 (378)
Q Consensus 268 ~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~------~~~l~~yd 340 (378)
. ++|..+-. ...|++.-.+ |... .....+. -++.|++..+ ...+..||
T Consensus 183 ~~~~~~yd~~--~~~W~~~~~~----p~~r-----------------~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd 237 (308)
T 1zgk_A 183 LNSAECYYPE--RNEWRMITAM----NTIR-----------------SGAGVCV--LHNCIYAAGGYDGQDQLNSVERYD 237 (308)
T ss_dssp CCCEEEEETT--TTEEEECCCC----SSCC-----------------BSCEEEE--ETTEEEEECCBCSSSBCCCEEEEE
T ss_pred CceEEEEeCC--CCeEeeCCCC----CCcc-----------------ccceEEE--ECCEEEEEeCCCCCCccceEEEEe
Confidence 2 88888752 5689865321 2100 0011111 2566666643 24599999
Q ss_pred CCCCcEEEEE
Q 035482 341 PRNEMFKDLL 350 (378)
Q Consensus 341 ~~t~~~~~v~ 350 (378)
+++++|+++.
T Consensus 238 ~~~~~W~~~~ 247 (308)
T 1zgk_A 238 VETETWTFVA 247 (308)
T ss_dssp TTTTEEEECC
T ss_pred CCCCcEEECC
Confidence 9999999986
No 10
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.08 E-value=3.2e-11 Score=78.59 Aligned_cols=42 Identities=36% Similarity=0.557 Sum_probs=38.3
Q ss_pred CCCCcHHHHHHHhccCCcccccccccchhhhhhhccCCCccc
Q 035482 1 MEYLPQEIVLDILSRLPVTSLLHFKLVCKAWLNTAQNPLLPS 42 (378)
Q Consensus 1 ~~~LP~Dll~eIL~rLP~~~l~r~r~VcK~W~~li~~~~F~~ 42 (378)
++.||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 468999999999999999999999999999999999887643
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.04 E-value=3.9e-08 Score=88.48 Aligned_cols=195 Identities=10% Similarity=0.079 Sum_probs=124.9
Q ss_pred ceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEeC
Q 035482 112 NRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSLG 191 (378)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~ 191 (378)
..+.++||.+++|..+++.+..+.....+. + +-+|+.+...... .....+++|+..+++|+.+.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~-----~~~lyv~GG~~~~---------~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVY--M-----AGLVFAVGGFNGS---------LRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE--E-----TTEEEEESCBCSS---------SBCCCEEEEETTTTEEEEEC
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEE--E-----CCEEEEEeCcCCC---------ccccceEEECCCCCceeeCC
Confidence 568899999999999987655433222221 1 1245555432211 11256899999999999998
Q ss_pred cccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEc-CCCccCcceeEEEEeCCeEEEEEeCCCC---
Q 035482 192 QVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVE-KPDELHRIHYDLVNLGGCLSAAVPCSSG--- 267 (378)
Q Consensus 192 ~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~G~L~~v~~~~~~--- 267 (378)
.+|... ....++.++|.+|.+...........+..||+.+++|+.++ +|.. +.....+.++|+|+++......
T Consensus 94 ~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 94 NMRDRR-STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR--RSSVGVGVVGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp CCSSCC-BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCEETTTTE
T ss_pred CCCccc-cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc--ccCceEEEECCEEEEEeCCCCCCCc
Confidence 776543 34556778999999987532223357999999999999984 3432 2334567789999988643221
Q ss_pred -c-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc------CCeEEEE
Q 035482 268 -K-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK------CRALVSY 339 (378)
Q Consensus 268 -~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~------~~~l~~y 339 (378)
. ++|..+-. ...|++.-.+ |... .... + +.-++.+++..+ ...+..|
T Consensus 171 ~~~~~~~yd~~--~~~W~~~~~~----p~~r-----------------~~~~-~-~~~~~~iyv~GG~~~~~~~~~~~~y 225 (302)
T 2xn4_A 171 CLSTVECYNAT--TNEWTYIAEM----STRR-----------------SGAG-V-GVLNNLLYAVGGHDGPLVRKSVEVY 225 (302)
T ss_dssp ECCCEEEEETT--TTEEEEECCC----SSCC-----------------BSCE-E-EEETTEEEEECCBSSSSBCCCEEEE
T ss_pred cccEEEEEeCC--CCcEEECCCC----cccc-----------------cccc-E-EEECCEEEEECCCCCCcccceEEEE
Confidence 2 78888752 5689886322 2110 0011 1 112566666643 1459999
Q ss_pred eCCCCcEEEEE
Q 035482 340 NPRNEMFKDLL 350 (378)
Q Consensus 340 d~~t~~~~~v~ 350 (378)
|+++++|+.+.
T Consensus 226 d~~~~~W~~~~ 236 (302)
T 2xn4_A 226 DPTTNAWRQVA 236 (302)
T ss_dssp ETTTTEEEEEC
T ss_pred eCCCCCEeeCC
Confidence 99999999986
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.04 E-value=2.1e-08 Score=92.48 Aligned_cols=178 Identities=14% Similarity=0.066 Sum_probs=109.7
Q ss_pred EeeeCceEEEeecCCCceEEEEccc--ccceeeCCCCC-CCCCccEEEEEEEeCCCCCeEEEEEEEEec-CCCCcccccC
Q 035482 96 VGSCKGLLCLCDSSTKNRLYVYNPF--TRNYVELPKST-EFQTQDVVFGFGFHPTTNKYKVVKIDYCRK-THGNHRYYRG 171 (378)
Q Consensus 96 ~~s~~GLl~~~~~~~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~-~~~~~~~~~~ 171 (378)
.+..+|.|.+..+.....++++||. +++|..+|+.+ ..+.....+. ++ =+|+.+..... ..+..
T Consensus 15 ~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~--~~-----~~lyv~GG~~~~~~~~~----- 82 (357)
T 2uvk_A 15 GAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF--ID-----GNLYVFGGIGKNSEGLT----- 82 (357)
T ss_dssp EEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE--ET-----TEEEEECCEEECTTSCE-----
T ss_pred EEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE--EC-----CEEEEEcCCCCCCCccc-----
Confidence 3344888877655445689999998 49999998866 3332222222 21 25666544311 11000
Q ss_pred CCceEEEEEEcCCCCeEEeCccc-ceeecCCCcEEECCeEEEEeccCCC-------------------------------
Q 035482 172 YGKSEVQILTLGSQEWRSLGQVN-YHMLEAPSQVLVNGRLHWCTWPRYR------------------------------- 219 (378)
Q Consensus 172 ~~~~~~~Vyss~~~~W~~~~~~p-~~~~~~~~~v~~~G~lyw~~~~~~~------------------------------- 219 (378)
.....+++|+..+++|+.+..++ ... ....++..+|.+|.+......
T Consensus 83 ~~~~~v~~yd~~~~~W~~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (357)
T 2uvk_A 83 QVFNDVHKYNPKTNSWVKLMSHAPMGM-AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKA 161 (357)
T ss_dssp EECCCEEEEETTTTEEEECSCCCSSCC-SSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCG
T ss_pred eeeccEEEEeCCCCcEEECCCCCCccc-ccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccc
Confidence 11256899999999999988665 222 233456799999999864211
Q ss_pred ---CCCcEEEEEECCCceEeEE-cCCCccCcceeEEEEeCCeEEEEEeCCC-C--c-eEEEEeeCCCCCceeeEEE
Q 035482 220 ---GPSRLLISFDIADEQFRVV-EKPDELHRIHYDLVNLGGCLSAAVPCSS-G--K-EIWVMKEYDVKESWIKEYN 287 (378)
Q Consensus 220 ---~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~l~~~~G~L~~v~~~~~-~--~-~iW~l~~~~~~~~W~~~~~ 287 (378)
.....+.+||+.+++|+.+ ++|... .....++..+|+|+++..... . . ++|.++-......|++...
T Consensus 162 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~ 236 (357)
T 2uvk_A 162 EDYFFNKFLLSFDPSTQQWSYAGESPWYG-TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP 236 (357)
T ss_dssp GGGCCCCEEEEEETTTTEEEEEEECSSCC-CBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC
T ss_pred cccCCcccEEEEeCCCCcEEECCCCCCCC-cccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC
Confidence 0135899999999999998 345321 122467778999988864321 1 2 8888763222568987643
No 13
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.98 E-value=4.6e-11 Score=105.70 Aligned_cols=48 Identities=29% Similarity=0.554 Sum_probs=44.6
Q ss_pred CCCCcHHHHHHHhccCCccccc-ccccchhhhhhhccCCCccccccccC
Q 035482 1 MEYLPQEIVLDILSRLPVTSLL-HFKLVCKAWLNTAQNPLLPSLQFSRM 48 (378)
Q Consensus 1 ~~~LP~Dll~eIL~rLP~~~l~-r~r~VcK~W~~li~~~~F~~~~~~~~ 48 (378)
|+.||+||+.+||+|||+++|+ ||++|||+|+++++++.|.+.|+.+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 4689999999999999999999 99999999999999999999887554
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.88 E-value=8.6e-07 Score=81.64 Aligned_cols=252 Identities=11% Similarity=-0.003 Sum_probs=136.0
Q ss_pred CcEEEEecCCCCcCCcceeeeccCCCCce-eEEeeeCceEEEeecC---------CCceEEEEcccccceeeCCCCC-CC
Q 035482 65 NQLYSFELSSRDEDNQTVHQIRVPALPEF-DVVGSCKGLLCLCDSS---------TKNRLYVYNPFTRNYVELPKST-EF 133 (378)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~GLl~~~~~~---------~~~~~~V~NP~T~~~~~LP~~~-~~ 133 (378)
+.++.+|+......+..+..++ ..++. .-.+..+|.|.+..+. ....+.++||.|++|..+++.+ ..
T Consensus 31 ~~~~~~d~~~~~~~W~~~~~~p--~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~ 108 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALAAFP--GGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMG 108 (357)
T ss_dssp TCEEEEETTSSSCCEEECCCCT--TCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSC
T ss_pred CeEEEEccccCCCCeeECCCCC--CCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcc
Confidence 4667777643222232332222 11221 2244567777665432 1246899999999999998755 32
Q ss_pred CCccEEEEEEEeCCCCCeEEEEEEEEecCCC-Cc------------------------ccccCCCceEEEEEEcCCCCeE
Q 035482 134 QTQDVVFGFGFHPTTNKYKVVKIDYCRKTHG-NH------------------------RYYRGYGKSEVQILTLGSQEWR 188 (378)
Q Consensus 134 ~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~-~~------------------------~~~~~~~~~~~~Vyss~~~~W~ 188 (378)
+. ...... ++ =|++.+........ .. ..........+++|+..+++|+
T Consensus 109 r~-~~~~~~-~~-----~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 181 (357)
T 2uvk_A 109 MA-GHVTFV-HN-----GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWS 181 (357)
T ss_dssp CS-SEEEEE-ET-----TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEE
T ss_pred cc-cceEEE-EC-----CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEE
Confidence 22 222211 22 25655543221100 00 0000001257999999999999
Q ss_pred EeCcccceeecCCCcEEECCeEEEEeccCC-CCCCcEEEEEEC--CCceEeEEc-CCCccCcceeEEEEeCCeEEEEEeC
Q 035482 189 SLGQVNYHMLEAPSQVLVNGRLHWCTWPRY-RGPSRLLISFDI--ADEQFRVVE-KPDELHRIHYDLVNLGGCLSAAVPC 264 (378)
Q Consensus 189 ~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~-~~~~~~il~fD~--~~e~~~~i~-lP~~~~~~~~~l~~~~G~L~~v~~~ 264 (378)
.+..+|.........+.++|.+|.+..... ......+.+||+ ++.+|+.++ +|.........++..+|+|+++...
T Consensus 182 ~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~ 261 (357)
T 2uvk_A 182 YAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGA 261 (357)
T ss_dssp EEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCE
T ss_pred ECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCc
Confidence 988666433333567788999999976421 112356788887 899999873 3432222334578889999988642
Q ss_pred CC-----------------C---ceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeC
Q 035482 265 SS-----------------G---KEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKN 324 (378)
Q Consensus 265 ~~-----------------~---~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (378)
.. . .++|+.+-. ...|++.-.+.. ++. . ..++.-+
T Consensus 262 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~--~r~-------------------~--~~~~~~~ 316 (357)
T 2uvk_A 262 GFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELSQ--GRA-------------------Y--GVSLPWN 316 (357)
T ss_dssp ECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSS--CCB-------------------S--SEEEEET
T ss_pred cccCCcccccccceeccccccceeeEEEEecC--CCceeeCCCCCC--Ccc-------------------c--ceeEEeC
Confidence 11 1 156666542 468988754322 110 0 0112235
Q ss_pred CcEEEEEcC-------CeEEEEeCCCCcEEEEE
Q 035482 325 GEILLEYKC-------RALVSYNPRNEMFKDLL 350 (378)
Q Consensus 325 g~vl~~~~~-------~~l~~yd~~t~~~~~v~ 350 (378)
+.|++..+. ..+..+++++++|.+..
T Consensus 317 ~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 317 NSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp TEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred CEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 667666431 34788999999988764
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.85 E-value=2.9e-07 Score=83.41 Aligned_cols=201 Identities=10% Similarity=0.131 Sum_probs=119.0
Q ss_pred ceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEec-CCCCcccccCCCceEEEEEEcCCCCeEEe
Q 035482 112 NRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRK-THGNHRYYRGYGKSEVQILTLGSQEWRSL 190 (378)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~-~~~~~~~~~~~~~~~~~Vyss~~~~W~~~ 190 (378)
....+.||.|++|...|.+...+... .+... .+-+|+.++.... .++.. ......+++|+..+++|+.+
T Consensus 24 ~~~~~yd~~~~~W~~~~~~~~~~r~~--~~~~~----~~~~lyv~GG~~~~~~~~~----~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALAEQIPRNH--SSIVT----QQNQVYVVGGLYVDEENKD----QPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCSSE--EEEEC----SSSCEEEEESSCC-----------CCCBEEEEEETTTTEEEEC
T ss_pred cceEEECCCCCceecccCCccCCccc--eEEEE----ECCEEEEECCcccCccccC----CCccccEEEEeCCCCcEEEC
Confidence 45789999999998854322122211 11211 1223444443110 00000 01113489999999999999
Q ss_pred CcccceeecCCCcEEECCeEEEEeccCC--CCCCcEEEEEECCCceEeEEc-CCCccCcceeEEEEeCCeEEEEEeCCC-
Q 035482 191 GQVNYHMLEAPSQVLVNGRLHWCTWPRY--RGPSRLLISFDIADEQFRVVE-KPDELHRIHYDLVNLGGCLSAAVPCSS- 266 (378)
Q Consensus 191 ~~~p~~~~~~~~~v~~~G~lyw~~~~~~--~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~l~~~~G~L~~v~~~~~- 266 (378)
+.+|... .....+.++|.+|.+..... ......+.+||+.+.+|+.++ +|.. ......+..+|+|+++.....
T Consensus 94 ~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 94 PPLPSAR-CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK--VYGHNVISHNGMIYCLGGKTDD 170 (318)
T ss_dssp SCBSSCB-CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC--EESCEEEEETTEEEEECCEESS
T ss_pred CCCCccc-cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc--ccccEEEEECCEEEEEcCCCCC
Confidence 8776543 34456788999999987521 122357999999999999984 4542 223456668999988865321
Q ss_pred -C-c-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc------CCeEE
Q 035482 267 -G-K-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK------CRALV 337 (378)
Q Consensus 267 -~-~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~------~~~l~ 337 (378)
. . ++|+++-. ...|++.-.+.. ++. ... ++ .-++.|++..+ ...+.
T Consensus 171 ~~~~~~~~~yd~~--~~~W~~~~~~p~--~r~-------------------~~~-~~-~~~~~iyv~GG~~~~~~~~~~~ 225 (318)
T 2woz_A 171 KKCTNRVFIYNPK--KGDWKDLAPMKT--PRS-------------------MFG-VA-IHKGKIVIAGGVTEDGLSASVE 225 (318)
T ss_dssp SCBCCCEEEEETT--TTEEEEECCCSS--CCB-------------------SCE-EE-EETTEEEEEEEEETTEEEEEEE
T ss_pred CCccceEEEEcCC--CCEEEECCCCCC--Ccc-------------------cce-EE-EECCEEEEEcCcCCCCccceEE
Confidence 1 2 89998753 468987642211 110 001 11 12556665532 13578
Q ss_pred EEeCCCCcEEEEE
Q 035482 338 SYNPRNEMFKDLL 350 (378)
Q Consensus 338 ~yd~~t~~~~~v~ 350 (378)
.||+++++|+++.
T Consensus 226 ~yd~~~~~W~~~~ 238 (318)
T 2woz_A 226 AFDLKTNKWEVMT 238 (318)
T ss_dssp EEETTTCCEEECC
T ss_pred EEECCCCeEEECC
Confidence 9999999999985
No 16
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.82 E-value=3.4e-07 Score=82.91 Aligned_cols=170 Identities=16% Similarity=0.200 Sum_probs=112.8
Q ss_pred EeeeCceEEEeecC-------CCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCccc
Q 035482 96 VGSCKGLLCLCDSS-------TKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRY 168 (378)
Q Consensus 96 ~~s~~GLl~~~~~~-------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~ 168 (378)
.+..+|.|.+..+. ....+.++||.|++|..+++.+..+.....+. ++ -+++.+.......
T Consensus 94 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~-----~~iyv~GG~~~~~----- 161 (315)
T 4asc_A 94 LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HM-----DLVYVIGGKGSDR----- 161 (315)
T ss_dssp EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ET-----TEEEEECCBCTTS-----
T ss_pred EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--EC-----CEEEEEeCCCCCC-----
Confidence 44567777665431 12568999999999999988665443222222 21 2466654432211
Q ss_pred ccCCCceEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEc-CCCccCcc
Q 035482 169 YRGYGKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVE-KPDELHRI 247 (378)
Q Consensus 169 ~~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~ 247 (378)
.....+++|+..+++|+.+..+|... ....++.++|.+|.+...........+.+||+++++|..++ +|.. +.
T Consensus 162 ---~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~ 235 (315)
T 4asc_A 162 ---KCLNKMCVYDPKKFEWKELAPMQTAR-SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQE--RS 235 (315)
T ss_dssp ---CBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSC--CB
T ss_pred ---cccceEEEEeCCCCeEEECCCCCCch-hceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCc--cc
Confidence 12367999999999999998766533 34567788999999987632223457999999999999985 3432 23
Q ss_pred eeEEEEeCCeEEEEEeCCC----------C-c-eEEEEeeCCCCCceeeE
Q 035482 248 HYDLVNLGGCLSAAVPCSS----------G-K-EIWVMKEYDVKESWIKE 285 (378)
Q Consensus 248 ~~~l~~~~G~L~~v~~~~~----------~-~-~iW~l~~~~~~~~W~~~ 285 (378)
...++.++|+|+++..... . . ++|+.+-. ...|++.
T Consensus 236 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~--~~~W~~~ 283 (315)
T 4asc_A 236 SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEE--EKKWEGV 283 (315)
T ss_dssp SCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT--TTEEEEE
T ss_pred ceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCC--CChhhhh
Confidence 3467788999998865421 1 1 78888752 4689887
No 17
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.71 E-value=1.1e-05 Score=76.62 Aligned_cols=36 Identities=25% Similarity=0.396 Sum_probs=34.5
Q ss_pred CCCcHHHHHHHhccCCcccccccccchhhhhhhccC
Q 035482 2 EYLPQEIVLDILSRLPVTSLLHFKLVCKAWLNTAQN 37 (378)
Q Consensus 2 ~~LP~Dll~eIL~rLP~~~l~r~r~VcK~W~~li~~ 37 (378)
+.||+|++.+||+.||+++|.+++.|||+|+.++.+
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 469999999999999999999999999999999987
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.69 E-value=2.1e-06 Score=86.34 Aligned_cols=213 Identities=11% Similarity=0.091 Sum_probs=126.8
Q ss_pred eeeCceEEEeecC---CCceEEEEcccccceeeCC-C-----CCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcc
Q 035482 97 GSCKGLLCLCDSS---TKNRLYVYNPFTRNYVELP-K-----STEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHR 167 (378)
Q Consensus 97 ~s~~GLl~~~~~~---~~~~~~V~NP~T~~~~~LP-~-----~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~ 167 (378)
+..+|.|++.++. ....++++||.|++|..++ + .+..+..... ..... +-+++.++.......
T Consensus 394 ~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~---~~~~~--~~~lyv~GG~~~~~~--- 465 (695)
T 2zwa_A 394 DVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTF---TTISR--NNQLLLIGGRKAPHQ--- 465 (695)
T ss_dssp EECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEE---EEETT--TTEEEEECCBSSTTC---
T ss_pred EEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEE---EEEcc--CCEEEEEcCCCCCCC---
Confidence 3357777665432 2356899999999999987 4 2222211222 11110 124665544322111
Q ss_pred cccCCCceEEEEEEcCCCCeEEeCcccceeecCCCcEEE-CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcC----CC
Q 035482 168 YYRGYGKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV-NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEK----PD 242 (378)
Q Consensus 168 ~~~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~l----P~ 242 (378)
....+++|+..+++|+.++.+|... ....++.+ +|.+|.+++.... . .+.+||+.+++|..++. |.
T Consensus 466 -----~~~dv~~yd~~t~~W~~~~~~p~~R-~~h~~~~~~~~~iyv~GG~~~~--~-~v~~yd~~t~~W~~~~~~g~~p~ 536 (695)
T 2zwa_A 466 -----GLSDNWIFDMKTREWSMIKSLSHTR-FRHSACSLPDGNVLILGGVTEG--P-AMLLYNVTEEIFKDVTPKDEFFQ 536 (695)
T ss_dssp -----BCCCCEEEETTTTEEEECCCCSBCC-BSCEEEECTTSCEEEECCBCSS--C-SEEEEETTTTEEEECCCSSGGGG
T ss_pred -----ccccEEEEeCCCCcEEECCCCCCCc-ccceEEEEcCCEEEEECCCCCC--C-CEEEEECCCCceEEccCCCCCCC
Confidence 1256899999999999998776543 33445554 9999999876211 1 79999999999999863 33
Q ss_pred ccCcceeEEEEeC---CeEEEEEeCCC---C-c-eEEEEeeCCCCCc------eeeEEEEccCCCCCccccccCcccccc
Q 035482 243 ELHRIHYDLVNLG---GCLSAAVPCSS---G-K-EIWVMKEYDVKES------WIKEYNIGIHVPRGLEQDLSQSFRDSK 308 (378)
Q Consensus 243 ~~~~~~~~l~~~~---G~L~~v~~~~~---~-~-~iW~l~~~~~~~~------W~~~~~i~~~~~~~~~~~~~~~~~~~~ 308 (378)
. ......+.++ |+|+++..... . . ++|..+-.. .. |++...... .++
T Consensus 537 ~--r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~--~~w~~~~~W~~~~~~p~-~~R-------------- 597 (695)
T 2zwa_A 537 N--SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA--ENATEPITVIKKLQHPL-FQR-------------- 597 (695)
T ss_dssp S--CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT--TCSSCCEEEEEEEECGG-GCC--------------
T ss_pred c--ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC--CccccceEEEEcCCCCC-CCc--------------
Confidence 2 1222334444 88888875422 1 2 888887533 44 776655211 110
Q ss_pred ccccCceeEEEEEeeCCcEEEEEc---------CCeEEEEeCCCCcEEEEEE
Q 035482 309 FFRNRSFVRVLCLLKNGEILLEYK---------CRALVSYNPRNEMFKDLLL 351 (378)
Q Consensus 309 ~~~~~~~~~~~~~~~~g~vl~~~~---------~~~l~~yd~~t~~~~~v~~ 351 (378)
.-.-+++.+++.|++..+ ...+..||+++++|+.+.+
T Consensus 598 ------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 598 ------YGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp ------BSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred ------ccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 111122233366766643 2459999999999996543
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.58 E-value=3.4e-05 Score=72.91 Aligned_cols=44 Identities=32% Similarity=0.483 Sum_probs=39.4
Q ss_pred CCCCcHHHHHHHhccCCcccccccccchhhhhhhccCCCccccc
Q 035482 1 MEYLPQEIVLDILSRLPVTSLLHFKLVCKAWLNTAQNPLLPSLQ 44 (378)
Q Consensus 1 ~~~LP~Dll~eIL~rLP~~~l~r~r~VcK~W~~li~~~~F~~~~ 44 (378)
++.||+|++..||+.|++++|.++.+|||+|+.++.++.+-+..
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~ 62 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREK 62 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhh
Confidence 46899999999999999999999999999999999988664433
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.42 E-value=1.5e-05 Score=75.27 Aligned_cols=41 Identities=37% Similarity=0.550 Sum_probs=37.1
Q ss_pred CCCcHH----HHHHHhccCCcccccccccchhhhhhhccCCCccc
Q 035482 2 EYLPQE----IVLDILSRLPVTSLLHFKLVCKAWLNTAQNPLLPS 42 (378)
Q Consensus 2 ~~LP~D----ll~eIL~rLP~~~l~r~r~VcK~W~~li~~~~F~~ 42 (378)
+.||+| |+..||+.|++++|.++.+|||+|+.++.++.+=+
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~ 56 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWK 56 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 468999 99999999999999999999999999999886533
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.15 E-value=0.00013 Score=72.97 Aligned_cols=221 Identities=9% Similarity=0.054 Sum_probs=122.9
Q ss_pred EeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCce
Q 035482 96 VGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKS 175 (378)
Q Consensus 96 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 175 (378)
....+|.|++..+.....+.++||.|++|..+|+.+..+.......+ + +=||+.+........ ...
T Consensus 249 ~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~---~---dg~iyv~GG~~~~~~--------~~~ 314 (656)
T 1k3i_A 249 SMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATM---S---DGRVFTIGGSWSGGV--------FEK 314 (656)
T ss_dssp EECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEEC---T---TSCEEEECCCCCSSS--------CCC
T ss_pred cCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEe---c---CCeEEEEeCcccCCc--------ccc
Confidence 34468888777654456899999999999999886654432222211 1 225666544221111 125
Q ss_pred EEEEEEcCCCCeEEeCcc---cceeecCCCcEEECCeEEEEeccCC----CCCCcEEEEEECCCceEeEEcCCCcc----
Q 035482 176 EVQILTLGSQEWRSLGQV---NYHMLEAPSQVLVNGRLHWCTWPRY----RGPSRLLISFDIADEQFRVVEKPDEL---- 244 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~~~~---p~~~~~~~~~v~~~G~lyw~~~~~~----~~~~~~il~fD~~~e~~~~i~lP~~~---- 244 (378)
.+++|+..+++|..+... |.........+..+|.+|.+..... ......+..||+.++.|.....+...
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~ 394 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGV 394 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEE
T ss_pred cceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccccccc
Confidence 689999999999987421 2211122233446788888775411 11245799999999998653211111
Q ss_pred --CcceeEEE---EeCCeEEEEEeCCC---C---ceEEEEeeCC-CCCceeeEEEEccCCCCCccccccCcccccccccc
Q 035482 245 --HRIHYDLV---NLGGCLSAAVPCSS---G---KEIWVMKEYD-VKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRN 312 (378)
Q Consensus 245 --~~~~~~l~---~~~G~L~~v~~~~~---~---~~iW~l~~~~-~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 312 (378)
.......+ ..+|+|+++..... . .....++-+. ....|.+.. ...+|..
T Consensus 395 ~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~~mp~~----------------- 455 (656)
T 1k3i_A 395 APDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA--SNGLYFA----------------- 455 (656)
T ss_dssp CCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC--TTCCSSC-----------------
T ss_pred CCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc--cCCCCCC-----------------
Confidence 00111112 24788888865321 1 1223333332 246787653 0111211
Q ss_pred CceeEEEEEeeCCcEEEEEcC------------CeEEEEeCCCCcEEEEE
Q 035482 313 RSFVRVLCLLKNGEILLEYKC------------RALVSYNPRNEMFKDLL 350 (378)
Q Consensus 313 ~~~~~~~~~~~~g~vl~~~~~------------~~l~~yd~~t~~~~~v~ 350 (378)
+...-..+..+|+|++..+. ..+..||+++++|+.+.
T Consensus 456 -R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 456 -RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp -CBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred -cccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 01112233347778777541 34889999999999865
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.97 E-value=0.00016 Score=72.19 Aligned_cols=122 Identities=9% Similarity=0.020 Sum_probs=78.0
Q ss_pred CceEEEeecCC----------CceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccc
Q 035482 100 KGLLCLCDSST----------KNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYY 169 (378)
Q Consensus 100 ~GLl~~~~~~~----------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~ 169 (378)
+|-|++..+.. ...+.++||.|++|..++..+..+.... .+..+.. +-+++.+....
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~-~~~~~~~---~g~lyv~GG~~--------- 263 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFC-PGISMDG---NGQIVVTGGND--------- 263 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSS-CEEEECT---TSCEEEECSSS---------
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCcc-ccccCCC---CCCEEEeCCCC---------
Confidence 88886654311 1257899999999999876543332111 1111111 22455543211
Q ss_pred cCCCceEEEEEEcCCCCeEEeCcccceeecCCCcEEE-CCeEEEEecc-CCCCCCcEEEEEECCCceEeEEc
Q 035482 170 RGYGKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV-NGRLHWCTWP-RYRGPSRLLISFDIADEQFRVVE 239 (378)
Q Consensus 170 ~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~-~G~lyw~~~~-~~~~~~~~il~fD~~~e~~~~i~ 239 (378)
...+++|+..++.|..+..++... ....++.+ +|++|.+... ........+..||+.+++|..++
T Consensus 264 ----~~~v~~yd~~t~~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~ 330 (656)
T 1k3i_A 264 ----AKKTSLYDSSSDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLP 330 (656)
T ss_dssp ----TTCEEEEEGGGTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEET
T ss_pred ----CCceEEecCcCCceeECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCC
Confidence 136899999999999988766533 23445666 9999999873 21223457999999999999974
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.92 E-value=0.00056 Score=68.71 Aligned_cols=162 Identities=9% Similarity=0.036 Sum_probs=102.1
Q ss_pred CceEEEeecCC-----CceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 100 KGLLCLCDSST-----KNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 100 ~GLl~~~~~~~-----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
+|-|.+.++.. ...+.++||.|++|..+++.+..+.....+.+. +-+|+.++.....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~------~~~iyv~GG~~~~------------ 512 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLP------DGNVLILGGVTEG------------ 512 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECT------TSCEEEECCBCSS------------
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEc------CCEEEEECCCCCC------------
Confidence 77776654321 246899999999999998766544322222111 2245554332211
Q ss_pred eEEEEEEcCCCCeEEeCc---ccceeecCCCcEEEC---CeEEEEeccCCC--CCCcEEEEEECCCce------EeEEcC
Q 035482 175 SEVQILTLGSQEWRSLGQ---VNYHMLEAPSQVLVN---GRLHWCTWPRYR--GPSRLLISFDIADEQ------FRVVEK 240 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~---~p~~~~~~~~~v~~~---G~lyw~~~~~~~--~~~~~il~fD~~~e~------~~~i~l 240 (378)
..+++|+..+++|..+.. +|... ....++.++ |.+|.+++.... .....+.+||+.+++ |..+.-
T Consensus 513 ~~v~~yd~~t~~W~~~~~~g~~p~~r-~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 513 PAMLLYNVTEEIFKDVTPKDEFFQNS-LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp CSEEEEETTTTEEEECCCSSGGGGSC-CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred CCEEEEECCCCceEEccCCCCCCCcc-cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 168999999999999874 44332 233445656 889999865221 234689999999999 877732
Q ss_pred -CCccCcceeEEEEeC-CeEEEEEeCCC-----Cc-eEEEEeeCCCCCcee
Q 035482 241 -PDELHRIHYDLVNLG-GCLSAAVPCSS-----GK-EIWVMKEYDVKESWI 283 (378)
Q Consensus 241 -P~~~~~~~~~l~~~~-G~L~~v~~~~~-----~~-~iW~l~~~~~~~~W~ 283 (378)
|. ..+.....+..+ |+|+++..... .. +||+++-. ...|+
T Consensus 592 ~p~-~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~--t~~W~ 639 (695)
T 2zwa_A 592 HPL-FQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL--SETLT 639 (695)
T ss_dssp CGG-GCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT--TTEEE
T ss_pred CCC-CCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC--CCeEE
Confidence 32 122334566777 99998865321 12 89988753 46898
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.73 E-value=1.5e-06 Score=76.04 Aligned_cols=47 Identities=28% Similarity=0.347 Sum_probs=40.9
Q ss_pred CCCcHHHHHHHhccCCcccccccccchhhhhhhccCCCccccccccC
Q 035482 2 EYLPQEIVLDILSRLPVTSLLHFKLVCKAWLNTAQNPLLPSLQFSRM 48 (378)
Q Consensus 2 ~~LP~Dll~eIL~rLP~~~l~r~r~VcK~W~~li~~~~F~~~~~~~~ 48 (378)
+.||+|++..||+.|++++|.++.+|||+||.+.+++..=+.++.+.
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 47999999999999999999999999999999999987655544443
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.56 E-value=2.6e-05 Score=70.91 Aligned_cols=42 Identities=36% Similarity=0.557 Sum_probs=38.1
Q ss_pred CCCCcHHHHHHHhccCCcccccccccchhhhhhhccCCCccc
Q 035482 1 MEYLPQEIVLDILSRLPVTSLLHFKLVCKAWLNTAQNPLLPS 42 (378)
Q Consensus 1 ~~~LP~Dll~eIL~rLP~~~l~r~r~VcK~W~~li~~~~F~~ 42 (378)
++.||+|++.+||++|+.+++.+++.|||+|+.++.+|...+
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~ 50 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSS
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhhe
Confidence 468999999999999999999999999999999998877533
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.86 E-value=0.00024 Score=69.82 Aligned_cols=34 Identities=24% Similarity=0.480 Sum_probs=29.5
Q ss_pred CCCCcHHHHHHHhccCC-cccccccccchhhhhhh
Q 035482 1 MEYLPQEIVLDILSRLP-VTSLLHFKLVCKAWLNT 34 (378)
Q Consensus 1 ~~~LP~Dll~eIL~rLP-~~~l~r~r~VcK~W~~l 34 (378)
++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 46899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.32 E-value=0.00094 Score=65.51 Aligned_cols=34 Identities=12% Similarity=0.351 Sum_probs=31.8
Q ss_pred CCCcHHHHHHHhccC-Ccccccccccchhhhhhhc
Q 035482 2 EYLPQEIVLDILSRL-PVTSLLHFKLVCKAWLNTA 35 (378)
Q Consensus 2 ~~LP~Dll~eIL~rL-P~~~l~r~r~VcK~W~~li 35 (378)
+.||+|++.+||++| |.+++.+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 379999999999999 8999999999999999874
No 28
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.89 E-value=1.6 Score=37.36 Aligned_cols=193 Identities=8% Similarity=0.030 Sum_probs=97.9
Q ss_pred EEeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 95 VVGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
+....+|.|.+... ....++++|| +++...+..+.. .....++.+|+.. ++.... .. .
T Consensus 104 i~~~~~g~l~v~~~-~~~~i~~~d~-~g~~~~~~~~~~---~~~~~~i~~~~~g---~l~v~~---~~-----------~ 161 (299)
T 2z2n_A 104 ITEGPNGDIWFTEM-NGNRIGRITD-DGKIREYELPNK---GSYPSFITLGSDN---ALWFTE---NQ-----------N 161 (299)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTS---CEEEEE---TT-----------T
T ss_pred eEECCCCCEEEEec-CCceEEEECC-CCCEEEecCCCC---CCCCceEEEcCCC---CEEEEe---CC-----------C
Confidence 33345777776643 3468999999 777665432111 1234566777653 222211 11 1
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV 252 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~ 252 (378)
..+.+|+. ++.......... . ....++.+ +|.+|+.... ...|..||. +.++..+.+|.... ....+.
T Consensus 162 ~~i~~~~~-~g~~~~~~~~~~-~-~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~ 231 (299)
T 2z2n_A 162 NAIGRITE-SGDITEFKIPTP-A-SGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFKIPTPNA-RPHAIT 231 (299)
T ss_dssp TEEEEECT-TCCEEEEECSST-T-CCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSSTTC-CEEEEE
T ss_pred CEEEEEcC-CCcEEEeeCCCC-C-CcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEECCCCCC-CceeEE
Confidence 35677777 666654321100 0 11123333 5787665543 468999999 77777776663211 112233
Q ss_pred E-eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE
Q 035482 253 N-LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY 331 (378)
Q Consensus 253 ~-~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~ 331 (378)
. -+|+|++.... ...|+.++..+ . ...+.. +.. .....-+.+ .+|.+++..
T Consensus 232 ~~~~g~l~v~~~~--~~~i~~~d~~g---~---~~~~~~--~~~-----------------~~~~~~i~~-~~g~l~v~~ 283 (299)
T 2z2n_A 232 AGAGIDLWFTEWG--ANKIGRLTSNN---I---IEEYPI--QIK-----------------SAEPHGICF-DGETIWFAM 283 (299)
T ss_dssp ECSTTCEEEEETT--TTEEEEEETTT---E---EEEEEC--SSS-----------------SCCEEEEEE-CSSCEEEEE
T ss_pred ECCCCCEEEeccC--CceEEEECCCC---c---eEEEeC--CCC-----------------CCccceEEe-cCCCEEEEe
Confidence 3 25776665422 12555554311 1 122221 100 012233445 788998887
Q ss_pred cCCeEEEEeCCCCcEE
Q 035482 332 KCRALVSYNPRNEMFK 347 (378)
Q Consensus 332 ~~~~l~~yd~~t~~~~ 347 (378)
..+++..||+++++++
T Consensus 284 ~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 284 ECDKIGKLTLIKDNME 299 (299)
T ss_dssp TTTEEEEEEEC-----
T ss_pred cCCcEEEEEcCcccCC
Confidence 6788999999988754
No 29
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.21 E-value=7.9 Score=32.91 Aligned_cols=192 Identities=13% Similarity=0.151 Sum_probs=95.1
Q ss_pred eeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEE
Q 035482 98 SCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEV 177 (378)
Q Consensus 98 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 177 (378)
..+|.|.+........+.++|+..+....+..... ....++.+++.. . ++.... . ...+
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~----~~~~~i~~~~~g-~--l~v~~~---~-----------~~~i 144 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL----QHPRGVTVDNKG-R--IIVVEC---K-----------VMRV 144 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC----SCEEEEEECTTS-C--EEEEET---T-----------TTEE
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC----CCceEEEEeCCC-C--EEEEEC---C-----------CCEE
Confidence 46787777653224688999965544444433211 234567777753 2 332210 1 1456
Q ss_pred EEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEE-e
Q 035482 178 QILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVN-L 254 (378)
Q Consensus 178 ~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~ 254 (378)
.+|+.....-+....... .....++.+ +|.+|..... ...|..||...+....+..+.... ....+.. -
T Consensus 145 ~~~~~~g~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~~~-~p~~i~~d~ 216 (286)
T 1q7f_A 145 IIFDQNGNVLHKFGCSKH--LEFPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQYLRQIGGEGITN-YPIGVGINS 216 (286)
T ss_dssp EEECTTSCEEEEEECTTT--CSSEEEEEECSSSEEEEEEGG-----GTEEEEEETTCCEEEEESCTTTSC-SEEEEEECT
T ss_pred EEEcCCCCEEEEeCCCCc--cCCcEEEEECCCCCEEEEECC-----CCEEEEEcCCCCEEEEEccCCccC-CCcEEEECC
Confidence 777754433232221000 011123333 4887776544 478999999887666665432111 1122332 3
Q ss_pred CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEcCC
Q 035482 255 GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYKCR 334 (378)
Q Consensus 255 ~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~~~ 334 (378)
+|.|++...... ..|.+.+..+ .- ..++..... .....-+++..+|++++...++
T Consensus 217 ~G~l~v~~~~~~-~~i~~~~~~g---~~--~~~~~~~~~-------------------~~~~~~i~~~~~g~l~vs~~~~ 271 (286)
T 1q7f_A 217 NGEILIADNHNN-FNLTIFTQDG---QL--ISALESKVK-------------------HAQCFDVALMDDGSVVLASKDY 271 (286)
T ss_dssp TCCEEEEECSSS-CEEEEECTTS---CE--EEEEEESSC-------------------CSCEEEEEEETTTEEEEEETTT
T ss_pred CCCEEEEeCCCC-EEEEEECCCC---CE--EEEEcccCC-------------------CCcceeEEECCCCcEEEECCCC
Confidence 677776654322 1333333222 11 222221100 0012335666788887776667
Q ss_pred eEEEEeCCC
Q 035482 335 ALVSYNPRN 343 (378)
Q Consensus 335 ~l~~yd~~t 343 (378)
.+..|+...
T Consensus 272 ~v~v~~~~~ 280 (286)
T 1q7f_A 272 RLYIYRYVQ 280 (286)
T ss_dssp EEEEEECSC
T ss_pred eEEEEEccc
Confidence 788887654
No 30
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=90.15 E-value=7 Score=34.97 Aligned_cols=113 Identities=12% Similarity=0.171 Sum_probs=64.2
Q ss_pred CCcEEECCeEEEEeccCCCCCCcEEEEEECCCc--eEeEEcCCCc-------cCcceeEEEEeCCeEEEEEeCCCCceEE
Q 035482 201 PSQVLVNGRLHWCTWPRYRGPSRLLISFDIADE--QFRVVEKPDE-------LHRIHYDLVNLGGCLSAAVPCSSGKEIW 271 (378)
Q Consensus 201 ~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e--~~~~i~lP~~-------~~~~~~~l~~~~G~L~~v~~~~~~~~iW 271 (378)
..+++.+|.+|..... ..|.+||.++. .|+. +++.. ...........+|.+++.... ..|.
T Consensus 47 ~~p~v~~~~v~~~~~~------g~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~---g~l~ 116 (376)
T 3q7m_A 47 LHPALADNVVYAADRA------GLVKALNADDGKEIWSV-SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK---AQVY 116 (376)
T ss_dssp CCCEEETTEEEEECTT------SEEEEEETTTCCEEEEE-ECCC---CCSCCCCCEEEEEEEETTEEEEEETT---SEEE
T ss_pred eccEEECCEEEEEcCC------CeEEEEEccCCceeeee-cCccccccccccCcccccCceEeCCEEEEEcCC---CEEE
Confidence 4678899999987654 69999999754 4433 33321 111223445567777665432 2566
Q ss_pred EEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEcCCeEEEEeCCCCcEEEE
Q 035482 272 VMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYKCRALVSYNPRNEMFKDL 349 (378)
Q Consensus 272 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~~~~l~~yd~~t~~~~~v 349 (378)
.++....+..|... +.-. + ...++. .++.+++...++.++.+|+++++...-
T Consensus 117 a~d~~tG~~~W~~~--~~~~--------~--------------~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 117 ALNTSDGTVAWQTK--VAGE--------A--------------LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp EEETTTCCEEEEEE--CSSC--------C--------------CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEECCCCCEEEEEe--CCCc--------e--------------EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 66643225567442 1110 0 001111 256666666678899999999875543
No 31
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=89.34 E-value=11 Score=33.14 Aligned_cols=148 Identities=10% Similarity=0.099 Sum_probs=74.3
Q ss_pred eEEEEEEcC-CCCeEEeCcccceeecCCCcEEE--CCe-EEEEeccCCCCCCcEEEEEECC--CceEeEE----cCCCcc
Q 035482 175 SEVQILTLG-SQEWRSLGQVNYHMLEAPSQVLV--NGR-LHWCTWPRYRGPSRLLISFDIA--DEQFRVV----EKPDEL 244 (378)
Q Consensus 175 ~~~~Vyss~-~~~W~~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~il~fD~~--~e~~~~i----~lP~~~ 244 (378)
..+.+|+.. ++..................+.+ +|. +|..... ...|..||+. +.++..+ ..|...
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~-----~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL-----SSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----TTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 467888888 56555432111000000111222 576 5554443 3566666665 4565433 233321
Q ss_pred C-ccee-EEE-EeCCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEE
Q 035482 245 H-RIHY-DLV-NLGGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLC 320 (378)
Q Consensus 245 ~-~~~~-~l~-~~~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (378)
. .... .+. .-+|+..++....... .+|.++.. +.+.....+... + ....-++
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~---g~~~~~~~~~~~---~------------------~~~~~~~ 292 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD---GHLTLIQQISTE---G------------------DFPRDFD 292 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG---GCEEEEEEEECS---S------------------SCCCEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC---CcEEEeEEEecC---C------------------CCcCeEE
Confidence 1 1122 232 2367754444333333 78887642 345555444321 0 1123456
Q ss_pred EeeCCcEEEEEc--CCeEEEE--eCCCCcEEEEEE
Q 035482 321 LLKNGEILLEYK--CRALVSY--NPRNEMFKDLLL 351 (378)
Q Consensus 321 ~~~~g~vl~~~~--~~~l~~y--d~~t~~~~~v~~ 351 (378)
+..+|+.+++.. ++.+..| |.++++++.+..
T Consensus 293 ~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 293 LDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred ECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 677888666653 3566667 889999998874
No 32
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=89.22 E-value=20 Score=36.17 Aligned_cols=212 Identities=10% Similarity=0.063 Sum_probs=102.2
Q ss_pred eeCceEEEeecCCCceEEEEccccc----c-eeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCC
Q 035482 98 SCKGLLCLCDSSTKNRLYVYNPFTR----N-YVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGY 172 (378)
Q Consensus 98 s~~GLl~~~~~~~~~~~~V~NP~T~----~-~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 172 (378)
..+|.|.+.+. ....++..++... . ...+.... ....|+++|...+ +|++.. ..
T Consensus 433 ~~~~~lY~sD~-~~~~I~~~~l~g~~~~~~~~~vi~~~l-----~~P~GLAvD~~~~--~LY~tD---~~---------- 491 (791)
T 3m0c_C 433 VASNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRDI-----QAPDGLAVDWIHS--NIYWTD---SV---------- 491 (791)
T ss_dssp TTTTEEEEEET-TTTEEEEEEC--------CEEEECSSC-----SCCCEEEEETTTT--EEEEEE---TT----------
T ss_pred ccCCeeEEeec-cceeEEEEeccCCCCCcceeEEEecCC-----CCcceeeeeecCC--cEEEEe---cC----------
Confidence 34677777664 3356666666542 1 12222111 2234677887643 233321 11
Q ss_pred CceEEEEEEcCCCCeEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCccee
Q 035482 173 GKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHY 249 (378)
Q Consensus 173 ~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 249 (378)
...+++++.....-+.+.... .....++.+ +|.|||.... ....|.++++....-..+-. .... ...
T Consensus 492 -~~~I~v~~ldG~~~~~l~~~~---l~~P~gIaVDp~~g~LYwtD~g----~~~~I~~~~~dG~~~~~lv~-~~l~-~P~ 561 (791)
T 3m0c_C 492 -LGTVSVADTKGVKRKTLFREN---GSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVT-ENIQ-WPN 561 (791)
T ss_dssp -TTEEEEEETTSSSEEEEEECT---TCCEEEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEEC-SSCS-CEE
T ss_pred -CCeEEEEeCCCCeEEEEEeCC---CCCcceEEEecCCCCEEEecCC----CCCeEEEEecCCCceEEEEe-CCCC-Cce
Confidence 146788887765544432100 012234454 5899998765 23689999998765544421 1111 111
Q ss_pred EEEE--eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEee-CCc
Q 035482 250 DLVN--LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLK-NGE 326 (378)
Q Consensus 250 ~l~~--~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 326 (378)
-|+. .+|+|+++.. ....||+..-.| ....+.. .- .. ..-.++++.- ++.
T Consensus 562 GLavD~~~~~LYwaD~--~~~~I~~~d~dG-~~~~~v~---~~--~~-------------------~l~~P~glav~~~~ 614 (791)
T 3m0c_C 562 GITLDLLSGRLYWVDS--KLHSISSIDVNG-GNRKTIL---ED--EK-------------------RLAHPFSLAVFEDK 614 (791)
T ss_dssp EEEEETTTTEEEEEET--TTTEEEEEETTS-CSCEEEE---EC--TT-------------------TTSSEEEEEEETTE
T ss_pred EEEEecCCCeEEEEeC--CCCcEEEEecCC-CceEEEe---cC--CC-------------------ccCCCCEEEEeCCE
Confidence 2322 3677877753 223788887544 2222111 10 00 0012333332 334
Q ss_pred EEEEE-cCCeEEEEeCCCCcEEEEEEeCCCCeEEEEEEeCCc
Q 035482 327 ILLEY-KCRALVSYNPRNEMFKDLLLHGTPNLFEASVHEGSL 367 (378)
Q Consensus 327 vl~~~-~~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~~sl 367 (378)
|++.. ....|...|..+++-..+-..+...-+...+|.+..
T Consensus 615 lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~ 656 (791)
T 3m0c_C 615 VFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLT 656 (791)
T ss_dssp EEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGG
T ss_pred EEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeecccc
Confidence 44443 246788899888765554444443333344555443
No 33
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=88.96 E-value=10 Score=32.45 Aligned_cols=28 Identities=11% Similarity=-0.007 Sum_probs=22.0
Q ss_pred eeCCcEEEEEcCCeEEEEeCCCCcEEEE
Q 035482 322 LKNGEILLEYKCRALVSYNPRNEMFKDL 349 (378)
Q Consensus 322 ~~~g~vl~~~~~~~l~~yd~~t~~~~~v 349 (378)
..++..|++...++++.++++++++++-
T Consensus 265 ~~d~~~L~v~t~~~l~~~~~~~~~~~~~ 292 (296)
T 3e5z_A 265 GPEGRTLYMTVSTEFWSIETNVRGLEHH 292 (296)
T ss_dssp STTSCEEEEEETTEEEEEECSCCBCCC-
T ss_pred CCCCCEEEEEcCCeEEEEEccccccccc
Confidence 3577777777778899999999998764
No 34
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=87.79 E-value=15 Score=32.82 Aligned_cols=188 Identities=11% Similarity=0.088 Sum_probs=95.5
Q ss_pred EeeeCceEEEeecCCCceEEEEcccccceee---CCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCC
Q 035482 96 VGSCKGLLCLCDSSTKNRLYVYNPFTRNYVE---LPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGY 172 (378)
Q Consensus 96 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~---LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 172 (378)
....+|.|.+.. ....++.+|+.|++.++ ++... .. ... . + +. +|+... .
T Consensus 99 ~~~~~~~v~v~~--~~g~l~a~d~~tG~~~W~~~~~~~~--~~-~p~--~--~---~~-~v~v~~----~---------- 151 (376)
T 3q7m_A 99 VTVSGGHVYIGS--EKAQVYALNTSDGTVAWQTKVAGEA--LS-RPV--V--S---DG-LVLIHT----S---------- 151 (376)
T ss_dssp EEEETTEEEEEE--TTSEEEEEETTTCCEEEEEECSSCC--CS-CCE--E--E---TT-EEEEEC----T----------
T ss_pred ceEeCCEEEEEc--CCCEEEEEECCCCCEEEEEeCCCce--Ec-CCE--E--E---CC-EEEEEc----C----------
Confidence 455688887765 34689999999998543 22211 00 011 1 1 12 232211 1
Q ss_pred CceEEEEEEcCCC--CeEEeCcccce-eecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCce--EeEE-cCCCccC-
Q 035482 173 GKSEVQILTLGSQ--EWRSLGQVNYH-MLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQ--FRVV-EKPDELH- 245 (378)
Q Consensus 173 ~~~~~~Vyss~~~--~W~~~~~~p~~-~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~--~~~i-~lP~~~~- 245 (378)
.-.+..|+..+| .|+.....+.. ......++..+|.+|.-.. ...|.++|..+.+ |+.- ..|....
T Consensus 152 -~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~ 224 (376)
T 3q7m_A 152 -NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGD------NGRVSAVLMEQGQMIWQQRISQATGSTE 224 (376)
T ss_dssp -TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCT------TTEEEEEETTTCCEEEEEECCC------
T ss_pred -CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcC------CCEEEEEECCCCcEEEEEecccCCCCcc
Confidence 145788888888 58865432211 1123556777888876443 3689999997654 4332 2222110
Q ss_pred -----cceeEEEEeCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEE
Q 035482 246 -----RIHYDLVNLGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLC 320 (378)
Q Consensus 246 -----~~~~~l~~~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (378)
.........+|.+++... ...+..++....+..|... +.. ...+.
T Consensus 225 ~~~~~~~~~~p~~~~~~v~~~~~---~g~l~~~d~~tG~~~w~~~--~~~------------------------~~~~~- 274 (376)
T 3q7m_A 225 IDRLSDVDTTPVVVNGVVFALAY---NGNLTALDLRSGQIMWKRE--LGS------------------------VNDFI- 274 (376)
T ss_dssp -----CCCCCCEEETTEEEEECT---TSCEEEEETTTCCEEEEEC--CCC------------------------EEEEE-
T ss_pred cccccccCCCcEEECCEEEEEec---CcEEEEEECCCCcEEeecc--CCC------------------------CCCce-
Confidence 011122334566655432 1144444432224455432 000 01111
Q ss_pred EeeCCcEEEEEcCCeEEEEeCCCCcEEE
Q 035482 321 LLKNGEILLEYKCRALVSYNPRNEMFKD 348 (378)
Q Consensus 321 ~~~~g~vl~~~~~~~l~~yd~~t~~~~~ 348 (378)
..++.+++...++.++.+|+++++...
T Consensus 275 -~~~~~l~~~~~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 275 -VDGNRIYLVDQNDRVMALTIDGGVTLW 301 (376)
T ss_dssp -EETTEEEEEETTCCEEEEETTTCCEEE
T ss_pred -EECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 135667777777789999999998654
No 35
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=87.01 E-value=15 Score=32.20 Aligned_cols=210 Identities=10% Similarity=0.032 Sum_probs=104.2
Q ss_pred EEeeeCceEEEeecCCCceEEEEccccccee-eCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCC
Q 035482 95 VVGSCKGLLCLCDSSTKNRLYVYNPFTRNYV-ELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYG 173 (378)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 173 (378)
+..+.+|.+.+.+. ....+.++||.|++.. .++............++.++ +. +++.... ..
T Consensus 89 i~~~~~g~lyv~~~-~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~---~~-~lyv~~~--~~----------- 150 (328)
T 3dsm_A 89 IHFLSDEKAYVTQI-WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY---GK-YVYVNCW--SY----------- 150 (328)
T ss_dssp EEEEETTEEEEEEB-SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE---TT-EEEEEEC--TT-----------
T ss_pred EEEeCCCeEEEEEC-CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE---CC-EEEEEcC--CC-----------
Confidence 44457787766653 3578999999998865 34432200000011123332 22 2333211 00
Q ss_pred ceEEEEEEcCCCCeEEeCcccceeecCCCcEE--ECCeEEEEeccCCCCC-----CcEEEEEECCCceEe-EEcCCCccC
Q 035482 174 KSEVQILTLGSQEWRSLGQVNYHMLEAPSQVL--VNGRLHWCTWPRYRGP-----SRLLISFDIADEQFR-VVEKPDELH 245 (378)
Q Consensus 174 ~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~--~~G~lyw~~~~~~~~~-----~~~il~fD~~~e~~~-~i~lP~~~~ 245 (378)
...+.+++..++.....-.... ...++. -+|.+|..+....... ...|.++|.++.+.. .+.+|...
T Consensus 151 ~~~v~viD~~t~~~~~~i~~g~----~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~- 225 (328)
T 3dsm_A 151 QNRILKIDTETDKVVDELTIGI----QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGD- 225 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECSS----CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTC-
T ss_pred CCEEEEEECCCCeEEEEEEcCC----CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCC-
Confidence 1568899999885432211111 111222 2588776654411111 268999999987765 46676532
Q ss_pred cceeEEEEe-CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEee-
Q 035482 246 RIHYDLVNL-GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLK- 323 (378)
Q Consensus 246 ~~~~~l~~~-~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 323 (378)
....+... +|+..++... .||+++... ..... ... .+. ......-+++..
T Consensus 226 -~p~~la~~~d~~~lyv~~~----~v~~~d~~t--~~~~~---~~~-~~~-----------------~~~~p~gi~vdp~ 277 (328)
T 3dsm_A 226 -WPSEVQLNGTRDTLYWINN----DIWRMPVEA--DRVPV---RPF-LEF-----------------RDTKYYGLTVNPN 277 (328)
T ss_dssp -CCEEEEECTTSCEEEEESS----SEEEEETTC--SSCCS---SCS-BCC-----------------CSSCEEEEEECTT
T ss_pred -CceeEEEecCCCEEEEEcc----EEEEEECCC--Cceee---eee-ecC-----------------CCCceEEEEEcCC
Confidence 12233333 3554444322 666665321 11100 000 000 001223355654
Q ss_pred CCcEEEEE-----cCCeEEEEeCCCCcEEEEEEeCCC
Q 035482 324 NGEILLEY-----KCRALVSYNPRNEMFKDLLLHGTP 355 (378)
Q Consensus 324 ~g~vl~~~-----~~~~l~~yd~~t~~~~~v~~~~~~ 355 (378)
+|.+++.. ..+.+..||++.+.+.++.....|
T Consensus 278 ~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~G~~P 314 (328)
T 3dsm_A 278 NGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVGIIP 314 (328)
T ss_dssp TCCEEEEECTTSSSEEEEEEECTTCCEEEEEEEEESE
T ss_pred CCeEEEEcccccccCCEEEEECCCCCEEEEEEeccCc
Confidence 67777765 357799999996667777653333
No 36
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=86.97 E-value=23 Score=35.23 Aligned_cols=139 Identities=14% Similarity=0.158 Sum_probs=69.2
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--C--CeEEEEeccCCCCCCcEEEEEECCCceE-eEEcCCCccCccee
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--N--GRLHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPDELHRIHY 249 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~--G~lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~ 249 (378)
..+.+|+..++.|.......... ..-..+.+ + |.+...+.. .+.|..+|+.+..- ..+.+.. .....
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~~l~sgs~-----dg~I~vwdl~~~~~~~~~~~~~--~~~~v 148 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAVHS-ASVNSVQWAPHEYGPLLLVASS-----DGKVSVVEFKENGTTSPIIIDA--HAIGV 148 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEET-----TSEEEEEECCSSSCCCCEEEEC--CSSCE
T ss_pred CeEEEEECCCCcccccccccCCC-CCeEEEEECCCCCCCEEEEEeC-----CCcEEEEEeecCCCcceeEeec--CCCce
Confidence 45888999888876554221100 00111222 1 444444333 47888888876521 1111110 01111
Q ss_pred EEEEe---------------CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCc
Q 035482 250 DLVNL---------------GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRS 314 (378)
Q Consensus 250 ~l~~~---------------~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (378)
.-+.+ +|.+.++...+....||.+... ...+....++... ..
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~--~~~~~~~~~~~~h---------------------~~ 205 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD--AQTYVLESTLEGH---------------------SD 205 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETT--TTEEEEEEEECCC---------------------SS
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCC--cccceeeeeecCC---------------------CC
Confidence 11111 3555555554333499988753 3455555554321 01
Q ss_pred eeEEEEEeeC---CcEEEEEc-CCeEEEEeCCCC
Q 035482 315 FVRVLCLLKN---GEILLEYK-CRALVSYNPRNE 344 (378)
Q Consensus 315 ~~~~~~~~~~---g~vl~~~~-~~~l~~yd~~t~ 344 (378)
.+.-+.+..+ |.+++... ++.+..||++++
T Consensus 206 ~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 206 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 2444555556 66666654 567888888876
No 37
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=86.10 E-value=18 Score=32.13 Aligned_cols=185 Identities=10% Similarity=0.074 Sum_probs=91.4
Q ss_pred eEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEE
Q 035482 102 LLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILT 181 (378)
Q Consensus 102 Ll~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vys 181 (378)
++++... ....+.+||..+++....-... ....++.+.+.. .+ ++.... . ...+.+++
T Consensus 3 ~l~vs~~-~d~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg-~~-l~~~~~-~-------------d~~i~v~d 60 (391)
T 1l0q_A 3 FAYIANS-ESDNISVIDVTSNKVTATIPVG-----SNPMGAVISPDG-TK-VYVANA-H-------------SNDVSIID 60 (391)
T ss_dssp EEEEEET-TTTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTS-SE-EEEEEG-G-------------GTEEEEEE
T ss_pred EEEEEcC-CCCEEEEEECCCCeEEEEeecC-----CCcceEEECCCC-CE-EEEECC-C-------------CCeEEEEE
Confidence 3444433 4578999999998766432211 123456666643 22 222211 1 14688899
Q ss_pred cCCCCeEEeCcccceeecCCCcEEE--CCe-EEEEeccCCCCCCcEEEEEECCCceEeE-EcCCCccCcceeEEEE-eCC
Q 035482 182 LGSQEWRSLGQVNYHMLEAPSQVLV--NGR-LHWCTWPRYRGPSRLLISFDIADEQFRV-VEKPDELHRIHYDLVN-LGG 256 (378)
Q Consensus 182 s~~~~W~~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~G 256 (378)
..++.-...-..... ...+.+ +|. +|..... ...|..+|+.+.+... +.... ....+.. -+|
T Consensus 61 ~~~~~~~~~~~~~~~----v~~~~~spdg~~l~~~~~~-----~~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg 127 (391)
T 1l0q_A 61 TATNNVIATVPAGSS----PQGVAVSPDGKQVYVTNMA-----SSTLSVIDTTSNTVAGTVKTGK----SPLGLALSPDG 127 (391)
T ss_dssp TTTTEEEEEEECSSS----EEEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEEEECSS----SEEEEEECTTS
T ss_pred CCCCeEEEEEECCCC----ccceEECCCCCEEEEEECC-----CCEEEEEECCCCeEEEEEeCCC----CcceEEECCCC
Confidence 888754322111111 111222 354 4444333 4789999998876533 33221 1122222 256
Q ss_pred eEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE--cC
Q 035482 257 CLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY--KC 333 (378)
Q Consensus 257 ~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~--~~ 333 (378)
+..++....+.. .+|.++. ... ...+... .....+.+..+|+.++.. .+
T Consensus 128 ~~l~~~~~~~~~v~~~d~~~----~~~--~~~~~~~----------------------~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 128 KKLYVTNNGDKTVSVINTVT----KAV--INTVSVG----------------------RSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp SEEEEEETTTTEEEEEETTT----TEE--EEEEECC----------------------SSEEEEEECTTSSEEEEEETTT
T ss_pred CEEEEEeCCCCEEEEEECCC----CcE--EEEEecC----------------------CCcceEEECCCCCEEEEEeCCC
Confidence 655444433333 5664432 111 2222210 112345566677666443 35
Q ss_pred CeEEEEeCCCCcEEEE
Q 035482 334 RALVSYNPRNEMFKDL 349 (378)
Q Consensus 334 ~~l~~yd~~t~~~~~v 349 (378)
+.+..||+++++....
T Consensus 180 ~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDT 195 (391)
T ss_dssp TEEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCeEEEE
Confidence 6799999998876543
No 38
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=83.88 E-value=20 Score=30.84 Aligned_cols=141 Identities=10% Similarity=0.031 Sum_probs=67.9
Q ss_pred eEEEEEEcC-CCCeEEeCcccceeecCCCcEEE--CCe-EEEEeccCCCCCCcEEEEEECC--CceEeEE-cCCCccCcc
Q 035482 175 SEVQILTLG-SQEWRSLGQVNYHMLEAPSQVLV--NGR-LHWCTWPRYRGPSRLLISFDIA--DEQFRVV-EKPDELHRI 247 (378)
Q Consensus 175 ~~~~Vyss~-~~~W~~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~il~fD~~--~e~~~~i-~lP~~~~~~ 247 (378)
..+.+|+.. ++..+.+...+.. .....+.+ +|. +|..... ...|..||+. +.++..+ .++... .
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~--~ 85 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVDVP--GQVQPMVVSPDKRYLYVGVRP-----EFRVLAYRIAPDDGALTFAAESALPG--S 85 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEECS--SCCCCEEECTTSSEEEEEETT-----TTEEEEEEECTTTCCEEEEEEEECSS--C
T ss_pred CeEEEEEECCCCcEEEeeeEecC--CCCceEEECCCCCEEEEeecC-----CCeEEEEEecCCCCceeeccccccCC--C
Confidence 456777764 4455543321110 11222333 455 5555443 3688888887 6666543 222211 1
Q ss_pred eeEEE-EeCCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCC
Q 035482 248 HYDLV-NLGGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNG 325 (378)
Q Consensus 248 ~~~l~-~~~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 325 (378)
...+. .-+|+..++....... .+|.++ .+ ........+... ....-+.+..+|
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~-~~--~~~~~~~~~~~~----------------------~~~~~~~~s~dg 140 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLE-DG--LPVGVVDVVEGL----------------------DGCHSANISPDN 140 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEE-TT--EEEEEEEEECCC----------------------TTBCCCEECTTS
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECC-CC--ccccccccccCC----------------------CCceEEEECCCC
Confidence 11222 2367655555443443 788775 22 223333333221 011223444566
Q ss_pred cEEEEE--cCCeEEEEeCCC-CcEEEE
Q 035482 326 EILLEY--KCRALVSYNPRN-EMFKDL 349 (378)
Q Consensus 326 ~vl~~~--~~~~l~~yd~~t-~~~~~v 349 (378)
+.++.. .++.+..||+++ ++++.+
T Consensus 141 ~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 141 RTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred CEEEEecCCCCEEEEEEecCCCceeee
Confidence 655544 457788888887 666543
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=82.83 E-value=23 Score=30.82 Aligned_cols=124 Identities=8% Similarity=0.027 Sum_probs=64.1
Q ss_pred CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcC-CCccCcceeEEE-EeCCeEEEEEeCCCCc-eEEEEeeCCCCCcee
Q 035482 207 NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEK-PDELHRIHYDLV-NLGGCLSAAVPCSSGK-EIWVMKEYDVKESWI 283 (378)
Q Consensus 207 ~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~l-P~~~~~~~~~l~-~~~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~ 283 (378)
+|.+|..... .....|..||+.+.+.+.+.. +.. ......+. .-+|+..++....... .+|.++..+ ...
T Consensus 50 dg~l~~~~~~---~~~~~v~~~~~~~g~~~~~~~~~~~-~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g---~~~ 122 (347)
T 3hfq_A 50 KDCLYSVDKE---DDEGGIAAWQIDGQTAHKLNTVVAP-GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG---ALT 122 (347)
T ss_dssp TCEEEEEEEE---TTEEEEEEEEEETTEEEEEEEEEEE-SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS---CEE
T ss_pred CCeEEEEEec---CCCceEEEEEecCCcEEEeeeeecC-CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC---Cee
Confidence 6887776642 123689999998877766532 211 11112333 3367755555434444 888886533 333
Q ss_pred eEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc-CCeEEEEeCC-CCcEEEE
Q 035482 284 KEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK-CRALVSYNPR-NEMFKDL 349 (378)
Q Consensus 284 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~-~~~l~~yd~~-t~~~~~v 349 (378)
....+... ..+ +.. . .......-+++..+|++++... ++.+..||++ ++++..+
T Consensus 123 ~~~~~~~~-~~~--p~~-~--------~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 123 LTDTVQHS-GHG--PRP-E--------QDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEEEECC-CCC--SST-T--------CSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred ecceeecC-CCC--CCc-c--------ccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 33443321 000 000 0 0011244466777888443332 4678888888 6666544
No 40
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=82.55 E-value=26 Score=31.07 Aligned_cols=190 Identities=10% Similarity=0.049 Sum_probs=93.4
Q ss_pred EeeeCc-eEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 96 VGSCKG-LLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 96 ~~s~~G-Ll~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
.-+.+| .|++... ....+.++|+.|++....-... ....++.+.+.. .+-++. . .. .
T Consensus 38 ~~s~dg~~l~~~~~-~d~~i~v~d~~~~~~~~~~~~~-----~~v~~~~~spdg-~~l~~~-~---~~-----------~ 95 (391)
T 1l0q_A 38 VISPDGTKVYVANA-HSNDVSIIDTATNNVIATVPAG-----SSPQGVAVSPDG-KQVYVT-N---MA-----------S 95 (391)
T ss_dssp EECTTSSEEEEEEG-GGTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTS-SEEEEE-E---TT-----------T
T ss_pred EECCCCCEEEEECC-CCCeEEEEECCCCeEEEEEECC-----CCccceEECCCC-CEEEEE-E---CC-----------C
Confidence 344455 3434432 3468999999998876532211 133456667643 322222 1 01 1
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCe-EEEEeccCCCCCCcEEEEEECCCceEeE-EcCCCccCcceeE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGR-LHWCTWPRYRGPSRLLISFDIADEQFRV-VEKPDELHRIHYD 250 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~ 250 (378)
..+.+|+..++.-...-..... ..++.+ +|. +|..... .+.|..+|+.+.+... +.... ....
T Consensus 96 ~~v~v~d~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~----~~~~ 162 (391)
T 1l0q_A 96 STLSVIDTTSNTVAGTVKTGKS----PLGLALSPDGKKLYVTNNG-----DKTVSVINTVTKAVINTVSVGR----SPKG 162 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSS----EEEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEEEECCS----SEEE
T ss_pred CEEEEEECCCCeEEEEEeCCCC----cceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEecCC----Ccce
Confidence 4688999888744322111110 111222 454 4444433 5789999998876543 23221 1112
Q ss_pred EE-EeCCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEE
Q 035482 251 LV-NLGGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEIL 328 (378)
Q Consensus 251 l~-~~~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl 328 (378)
+. .-+|+..++....+.. .+|-++. ......+... ....-+++..+|+.+
T Consensus 163 ~~~~~dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~~~----------------------~~~~~~~~~~~g~~l 214 (391)
T 1l0q_A 163 IAVTPDGTKVYVANFDSMSISVIDTVT------NSVIDTVKVE----------------------AAPSGIAVNPEGTKA 214 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTT------TEEEEEEECS----------------------SEEEEEEECTTSSEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCC------CeEEEEEecC----------------------CCccceEECCCCCEE
Confidence 22 2256554444433333 5664432 1222222210 122334555677665
Q ss_pred EEE----cCCeEEEEeCCCCcEEE
Q 035482 329 LEY----KCRALVSYNPRNEMFKD 348 (378)
Q Consensus 329 ~~~----~~~~l~~yd~~t~~~~~ 348 (378)
+.. .++.+..||+++++...
T Consensus 215 ~~~~~~~~~~~v~~~d~~~~~~~~ 238 (391)
T 1l0q_A 215 YVTNVDKYFNTVSMIDTGTNKITA 238 (391)
T ss_dssp EEEEECSSCCEEEEEETTTTEEEE
T ss_pred EEEecCcCCCcEEEEECCCCeEEE
Confidence 554 35678888888876543
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=82.52 E-value=15 Score=33.52 Aligned_cols=185 Identities=13% Similarity=0.151 Sum_probs=85.4
Q ss_pred CCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEE
Q 035482 110 TKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRS 189 (378)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~ 189 (378)
..+.+.|||..+++...+-.... + .....++.|.|..+.+ ++... .+ -.+.+++.+++.-+.
T Consensus 140 ~dg~i~lWd~~~~~~~~~~~~~g-H-~~~V~~l~f~p~~~~~-l~s~s----~D-----------~~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKPTFIKGIG-A-GGSITGLKFNPLNTNQ-FYASS----ME-----------GTTRLQDFKGNILRV 201 (435)
T ss_dssp TTSCEEEECSSCCSCCEEECCCS-S-SCCCCEEEECSSCTTE-EEEEC----SS-----------SCEEEEETTSCEEEE
T ss_pred CCCEEEEEECCCCCceeEEEccC-C-CCCEEEEEEeCCCCCE-EEEEe----CC-----------CEEEEeeccCCceeE
Confidence 45789999998887543321111 1 1223456677654443 22211 11 457788887765443
Q ss_pred eCcccceeecCCCcE--EECCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEEe--CCeEEEEEeCC
Q 035482 190 LGQVNYHMLEAPSQV--LVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVNL--GGCLSAAVPCS 265 (378)
Q Consensus 190 ~~~~p~~~~~~~~~v--~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~G~L~~v~~~~ 265 (378)
....... .....++ .-+|.+...+.. .+.|..+|+.++....+.. +.....-+.+ +|.-.++....
T Consensus 202 ~~~~~~~-~~~~~~~~~~~~~~~l~~g~~-----dg~i~~wd~~~~~~~~~~~----h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 202 FASSDTI-NIWFCSLDVSASSRMVVTGDN-----VGNVILLNMDGKELWNLRM----HKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp EECCSSC-SCCCCCEEEETTTTEEEEECS-----SSBEEEEESSSCBCCCSBC----CSSCEEEEEECTTCSSEEEEEET
T ss_pred EeccCCC-CccEEEEEECCCCCEEEEEeC-----CCcEeeeccCcceeEEEec----ccceEEeeeecCCCceEEEEecC
Confidence 3211100 0011111 224554444433 5688899987654332221 1122222333 34433333333
Q ss_pred CCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE-cCCeEEEEeCCC
Q 035482 266 SGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY-KCRALVSYNPRN 343 (378)
Q Consensus 266 ~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~-~~~~l~~yd~~t 343 (378)
+.. .||-+........... . .. -...+.-+++..+|..|+.. .++.+..||.++
T Consensus 272 d~~v~iwd~~~~~~~~~~~~-----~-~~------------------h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASFLY-----S-LP------------------HRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp TSBCCEEETTTCCSSSCCSB-----C-CB------------------CSSCEEECCBCTTSSEEEEEESSSCEEEEESSS
T ss_pred cceeeEEecccccccceEEE-----e-ee------------------ccccccceeECCCCCeeEEEcCCCEEEEEECCC
Confidence 444 8887654221111000 0 00 00122333445577766654 356788888887
Q ss_pred CcE
Q 035482 344 EMF 346 (378)
Q Consensus 344 ~~~ 346 (378)
++.
T Consensus 328 ~~~ 330 (435)
T 4e54_B 328 WDC 330 (435)
T ss_dssp SSS
T ss_pred Ccc
Confidence 654
No 42
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=82.51 E-value=28 Score=31.48 Aligned_cols=143 Identities=13% Similarity=0.128 Sum_probs=73.6
Q ss_pred CceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEE
Q 035482 100 KGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQI 179 (378)
Q Consensus 100 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~V 179 (378)
.+.|++.. ...+...++.+++...+-... ....|+.+|+..+ +|+... .. ...+..
T Consensus 87 ~~~l~~~~---~~~I~~i~~~~~~~~~~~~~~-----~~~~gl~~d~~~~--~ly~~D---~~-----------~~~I~r 142 (386)
T 3v65_B 87 EPVLLFAN---RIDIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRRE--LVFWSD---VT-----------LDRILR 142 (386)
T ss_dssp CCEEEEEC---BSCEEEECTTSCCCEEEECSC-----SCEEEEEEETTTT--EEEEEE---TT-----------TTEEEE
T ss_pred cceeEeec---CccceeeccCCCcEEEEecCC-----CccEEEEEecCCC--eEEEEe---CC-----------CCcEEE
Confidence 45566553 256777777766654432211 3456888887644 333321 11 145677
Q ss_pred EEcCCCCeEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEEe--
Q 035482 180 LTLGSQEWRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVNL-- 254 (378)
Q Consensus 180 yss~~~~W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~~-- 254 (378)
++..++..+.+.... . ....++.+ +|.|||.... ...|.++|++...-..+- ..... ....++.-
T Consensus 143 ~~~~g~~~~~~~~~~--~-~~p~glavd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~-~~~l~-~P~giavdp~ 212 (386)
T 3v65_B 143 ANLNGSNVEEVVSTG--L-ESPGGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLL-WQSLE-KPRAIALHPM 212 (386)
T ss_dssp EETTSCCEEEEECSS--C-SCCCCEEEETTTTEEEEEETT-----TTEEEECBTTSCSCEEEE-CSSCS-CEEEEEEETT
T ss_pred EecCCCCcEEEEeCC--C-CCccEEEEEeCCCeEEEEcCC-----CCeEEEEeCCCCceEEee-cCCCC-CCcEEEEEcC
Confidence 777766544432111 0 11233333 6899998765 468999999765433332 11111 11223332
Q ss_pred CCeEEEEEeCCCCceEEEEeeCC
Q 035482 255 GGCLSAAVPCSSGKEIWVMKEYD 277 (378)
Q Consensus 255 ~G~L~~v~~~~~~~~iW~l~~~~ 277 (378)
+|.|+..... ....|+.....|
T Consensus 213 ~g~ly~td~~-~~~~I~r~~~dG 234 (386)
T 3v65_B 213 EGTIYWTDWG-NTPRIEASSMDG 234 (386)
T ss_dssp TTEEEEEECS-SSCEEEEEETTS
T ss_pred CCeEEEeccC-CCCEEEEEeCCC
Confidence 4666655432 223777776544
No 43
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=82.41 E-value=24 Score=30.75 Aligned_cols=140 Identities=14% Similarity=0.138 Sum_probs=70.8
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--C--CeEEEEeccCCCCCCcEEEEEECCCceE-eEEcCCCccCccee
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--N--GRLHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPDELHRIHY 249 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~--G~lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~ 249 (378)
-.+.+|+..++.|.......... ..-..+.+ + |.+...+.. .+.|..+|+.+..- ..+.+.. .....
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~~~--~~~~v 150 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHS-ASVNSVQWAPHEYGPLLLVASS-----DGKVSVVEFKENGTTSPIIIDA--HAIGV 150 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEET-----TSEEEEEECCTTSCCCEEEEEC--CTTCE
T ss_pred CEEEEEEcCCCceeEeeeecCCC-cceEEEEeCCCCCCCEEEEecC-----CCcEEEEecCCCCceeeEEecC--CCCce
Confidence 45788999988876554221100 00111222 1 333333333 46888888877521 2211111 01111
Q ss_pred -EEEEe--------------CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCc
Q 035482 250 -DLVNL--------------GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRS 314 (378)
Q Consensus 250 -~l~~~--------------~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (378)
.+... +|.+.++...+....||.+... ...|.....+... ..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~h---------------------~~ 207 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD--AQTYVLESTLEGH---------------------SD 207 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETT--TTEEEEEEEECCC---------------------SS
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCC--CcceeeEEEEecc---------------------cC
Confidence 11111 4666666554443499988752 3456665554321 01
Q ss_pred eeEEEEEeeC---CcEEEEEc-CCeEEEEeCCCCc
Q 035482 315 FVRVLCLLKN---GEILLEYK-CRALVSYNPRNEM 345 (378)
Q Consensus 315 ~~~~~~~~~~---g~vl~~~~-~~~l~~yd~~t~~ 345 (378)
.+.-+.+..+ +.+++... ++.+..||+++++
T Consensus 208 ~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 208 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 2344555566 66666544 5678888888763
No 44
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=80.99 E-value=28 Score=30.44 Aligned_cols=192 Identities=7% Similarity=-0.014 Sum_probs=102.9
Q ss_pred eCceEEEeecCCCceEEEEcccccce-eeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEE
Q 035482 99 CKGLLCLCDSSTKNRLYVYNPFTRNY-VELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEV 177 (378)
Q Consensus 99 ~~GLl~~~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 177 (378)
.++.+.+... ....+.|+|+.|++. ..+|... ...++.+++. . ++...... ...+
T Consensus 52 ~~~~lyv~~~-~~~~v~viD~~t~~~~~~i~~~~------~p~~i~~~~~--g-~lyv~~~~--------------~~~v 107 (328)
T 3dsm_A 52 RDGIGWIVVN-NSHVIFAIDINTFKEVGRITGFT------SPRYIHFLSD--E-KAYVTQIW--------------DYRI 107 (328)
T ss_dssp ETTEEEEEEG-GGTEEEEEETTTCCEEEEEECCS------SEEEEEEEET--T-EEEEEEBS--------------CSEE
T ss_pred ECCEEEEEEc-CCCEEEEEECcccEEEEEcCCCC------CCcEEEEeCC--C-eEEEEECC--------------CCeE
Confidence 4666655543 346899999999987 4465321 2234555553 3 45443211 1568
Q ss_pred EEEEcCCCCeE-EeCcccce---eecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEe-EEcCCCccCcceeEEE
Q 035482 178 QILTLGSQEWR-SLGQVNYH---MLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFR-VVEKPDELHRIHYDLV 252 (378)
Q Consensus 178 ~Vyss~~~~W~-~~~~~p~~---~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~l~ 252 (378)
.+++..++.-. .+.. ... .......+..+|.+|..... ....|.++|+++.+.. .++...... . ...
T Consensus 108 ~~iD~~t~~~~~~i~~-g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v~viD~~t~~~~~~i~~g~~p~--~-i~~ 179 (328)
T 3dsm_A 108 FIINPKTYEITGYIEC-PDMDMESGSTEQMVQYGKYVYVNCWS----YQNRILKIDTETDKVVDELTIGIQPT--S-LVM 179 (328)
T ss_dssp EEEETTTTEEEEEEEC-TTCCTTTCBCCCEEEETTEEEEEECT----TCCEEEEEETTTTEEEEEEECSSCBC--C-CEE
T ss_pred EEEECCCCeEEEEEEc-CCccccCCCcceEEEECCEEEEEcCC----CCCEEEEEECCCCeEEEEEEcCCCcc--c-eEE
Confidence 88998887432 1211 110 00111223467788777541 1468999999987653 355432111 1 112
Q ss_pred EeCCeEEEEEeCCC--------CceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeC
Q 035482 253 NLGGCLSAAVPCSS--------GKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKN 324 (378)
Q Consensus 253 ~~~G~L~~v~~~~~--------~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (378)
.-+|+++++..... ...|++.+.. ... ...++... .+ ....-+++..+
T Consensus 180 ~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~--t~~--v~~~~~~~--~g------------------~~p~~la~~~d 235 (328)
T 3dsm_A 180 DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE--TFT--VEKQFKFK--LG------------------DWPSEVQLNGT 235 (328)
T ss_dssp CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT--TTE--EEEEEECC--TT------------------CCCEEEEECTT
T ss_pred cCCCCEEEEECCCccCCccccCCceEEEEECC--CCe--EEEEEecC--CC------------------CCceeEEEecC
Confidence 23688776654321 1256666532 122 22333321 00 11234666667
Q ss_pred CcEEEEEcCCeEEEEeCCCCcEE
Q 035482 325 GEILLEYKCRALVSYNPRNEMFK 347 (378)
Q Consensus 325 g~vl~~~~~~~l~~yd~~t~~~~ 347 (378)
|+.+++... .++.+|++++++.
T Consensus 236 ~~~lyv~~~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 236 RDTLYWINN-DIWRMPVEADRVP 257 (328)
T ss_dssp SCEEEEESS-SEEEEETTCSSCC
T ss_pred CCEEEEEcc-EEEEEECCCCcee
Confidence 777777665 7999999998864
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=80.90 E-value=29 Score=30.54 Aligned_cols=30 Identities=10% Similarity=0.001 Sum_probs=18.9
Q ss_pred eEEEEEeeCCcEEEEEcCCeEEEEeCCCCc
Q 035482 316 VRVLCLLKNGEILLEYKCRALVSYNPRNEM 345 (378)
Q Consensus 316 ~~~~~~~~~g~vl~~~~~~~l~~yd~~t~~ 345 (378)
+.-+.+..+|.++....+++++.|+...+.
T Consensus 254 v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~ 283 (377)
T 3dwl_C 254 LRSLLWANESAIVAAGYNYSPILLQGNESG 283 (377)
T ss_dssp EEEEEEEETTEEEEEESSSSEEEECCCC--
T ss_pred eEEEEEcCCCCEEEEEcCCcEEEEEeCCCc
Confidence 445566677777777666667777776443
No 46
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=80.89 E-value=28 Score=31.73 Aligned_cols=114 Identities=9% Similarity=0.039 Sum_probs=59.8
Q ss_pred CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEEeCCeEEEEEeCCCCceEEEEeeCCCCCceeeEE
Q 035482 207 NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVNLGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEY 286 (378)
Q Consensus 207 ~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~ 286 (378)
+|.+||.... ...|..+|+++.....+.... .... -...-+|+..++........||.++..+ .|.. .
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~---~~~~-~ 208 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS---GWAP-T 208 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG---TTCE-E
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCCCceEEEEEcCC---Ccee-E
Confidence 6899998765 478999999987776653221 1111 1122345544443322222788887633 3432 1
Q ss_pred EEccCCCCCccccccCccccccccccCceeEEEEEee-CCcEEEEEcCCeEEEEeCCCCcEEEE
Q 035482 287 NIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLK-NGEILLEYKCRALVSYNPRNEMFKDL 349 (378)
Q Consensus 287 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~vl~~~~~~~l~~yd~~t~~~~~v 349 (378)
.+....+.. . ....-+++.. +|.+++....+.++.||++++..+.+
T Consensus 209 ~~g~~~~~~----~-------------~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 209 RIGQLGSTF----S-------------GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEEECCTTS----C-------------SCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred Eeeeccchh----c-------------CCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 221100000 0 0111234444 56666654456788888888775554
No 47
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=80.67 E-value=20 Score=32.65 Aligned_cols=60 Identities=5% Similarity=0.165 Sum_probs=32.0
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCC-ceEeEEc
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIAD-EQFRVVE 239 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~-e~~~~i~ 239 (378)
..+++++.....-+.+...+........-++.++.+||.... ...|..+|..+ +.-..+.
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~-----~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 268 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII-----NEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp TEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESS-----SCSEEEEESSSCCCCEEEE
T ss_pred CEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCC-----CCeEEEEEcCCCCceEEEe
Confidence 467777776543333321110000111223578899999866 57899999543 3334443
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=80.51 E-value=30 Score=30.55 Aligned_cols=183 Identities=9% Similarity=0.082 Sum_probs=92.7
Q ss_pred CceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEe
Q 035482 111 KNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSL 190 (378)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~ 190 (378)
...+.|||..+++....-..... .....++.+.+..+.+ +..... ...+.+++..+...+..
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~--l~s~~~--------------d~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGP--GDAITGMKFNQFNTNQ--LFVSSI--------------RGATTLRDFSGSVIQVF 156 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCST--TCBEEEEEEETTEEEE--EEEEET--------------TTEEEEEETTSCEEEEE
T ss_pred CCeEEEEeCCCcccceeeecCCc--CCceeEEEeCCCCCCE--EEEEeC--------------CCEEEEEECCCCceEEE
Confidence 46788999988776654321111 1344556666632222 222211 14678888887655544
Q ss_pred Cccc---ceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEEe--CCe-EEEEEeC
Q 035482 191 GQVN---YHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVNL--GGC-LSAAVPC 264 (378)
Q Consensus 191 ~~~p---~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~G~-L~~v~~~ 264 (378)
.... .... .-...-+|.....+.. .+.|..+|+..+....+.... ....-+.+ +|+ +.+....
T Consensus 157 ~~~~~~~~~v~--~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~h~----~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 157 AKTDSWDYWYC--CVDVSVSRQMLATGDS-----TGRLLLLGLDGHEIFKEKLHK----AKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp ECCCCSSCCEE--EEEEETTTTEEEEEET-----TSEEEEEETTSCEEEEEECSS----SCEEEEEECSSCTTEEEEEET
T ss_pred eccCCCCCCeE--EEEECCCCCEEEEECC-----CCCEEEEECCCCEEEEeccCC----CcEEEEEECCCCCCEEEEEeC
Confidence 3211 0000 0011123444333333 578999999766655554322 12222222 455 5554443
Q ss_pred CCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEee-CCcEEEEE-cCCeEEEEeCC
Q 035482 265 SSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLK-NGEILLEY-KCRALVSYNPR 342 (378)
Q Consensus 265 ~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~vl~~~-~~~~l~~yd~~ 342 (378)
+....||.+....... .....+... ..+.-+.+.. +|..++.. .++.+..||++
T Consensus 226 d~~i~iwd~~~~~~~~--~~~~~~~~~----------------------~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKN--SYIAEMPHE----------------------KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp TSEEEEEEGGGCCSTT--CEEEEEECS----------------------SCEEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred CCEEEEEeCCCCCccc--ceEEEecCC----------------------CceEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence 2223888876532111 222222210 1344566666 77777664 46789999999
Q ss_pred CCcE
Q 035482 343 NEMF 346 (378)
Q Consensus 343 t~~~ 346 (378)
+++.
T Consensus 282 ~~~~ 285 (383)
T 3ei3_B 282 DWSK 285 (383)
T ss_dssp BTTS
T ss_pred CCcc
Confidence 8764
No 49
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=79.90 E-value=35 Score=30.98 Aligned_cols=184 Identities=15% Similarity=0.111 Sum_probs=95.9
Q ss_pred ceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEeC
Q 035482 112 NRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSLG 191 (378)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~ 191 (378)
..+.++|..++..+.|.... .....+.+.|.. . +++... ... ....+.+++..++..+.+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~-----~~v~~~~~Spdg-~-~la~~s-~~~-----------~~~~i~~~d~~tg~~~~l~ 219 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP-----QPLMSPAWSPDG-S-KLAYVT-FES-----------GRSALVIQTLANGAVRQVA 219 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES-----SCEEEEEECTTS-S-EEEEEE-CTT-----------SSCEEEEEETTTCCEEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCC-----CcceeeEEcCCC-C-EEEEEE-ecC-----------CCcEEEEEECCCCcEEEee
Confidence 68999999876666554321 223445666643 2 233222 111 1157899999998776554
Q ss_pred cccceeecCCCcEEE--CCe-EEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE-EeCCeEEEEEeCCCC
Q 035482 192 QVNYHMLEAPSQVLV--NGR-LHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV-NLGGCLSAAVPCSSG 267 (378)
Q Consensus 192 ~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~G~L~~v~~~~~~ 267 (378)
..+... ..+.+ +|. +++.... .....|..+|+.+.+...+.... . ....+. .-+|+..++......
T Consensus 220 ~~~~~~----~~~~~spdg~~la~~~~~---~g~~~i~~~d~~~~~~~~l~~~~--~-~~~~~~~spdg~~l~~~s~~~g 289 (415)
T 2hqs_A 220 SFPRHN----GAPAFSPDGSKLAFALSK---TGSLNLYVMDLASGQIRQVTDGR--S-NNTEPTWFPDSQNLAFTSDQAG 289 (415)
T ss_dssp CCSSCE----EEEEECTTSSEEEEEECT---TSSCEEEEEETTTCCEEECCCCS--S-CEEEEEECTTSSEEEEEECTTS
T ss_pred cCCCcc----cCEEEcCCCCEEEEEEec---CCCceEEEEECCCCCEEeCcCCC--C-cccceEECCCCCEEEEEECCCC
Confidence 322111 11111 454 5544432 12357999999887765442211 1 111222 226775555444333
Q ss_pred c-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc----CCeEEEEeCC
Q 035482 268 K-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK----CRALVSYNPR 342 (378)
Q Consensus 268 ~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~----~~~l~~yd~~ 342 (378)
. .||.++-.+.. ...+... .....-+.+..+|+.++... ...++.+|++
T Consensus 290 ~~~i~~~d~~~~~-----~~~l~~~---------------------~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 290 RPQVYKVNINGGA-----PQRITWE---------------------GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp SCEEEEEETTSSC-----CEECCCS---------------------SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred CcEEEEEECCCCC-----EEEEecC---------------------CCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 3 88888753311 1112110 01233355666887665543 2479999999
Q ss_pred CCcEEEEE
Q 035482 343 NEMFKDLL 350 (378)
Q Consensus 343 t~~~~~v~ 350 (378)
+++.+.+.
T Consensus 344 ~~~~~~l~ 351 (415)
T 2hqs_A 344 TGGVQVLS 351 (415)
T ss_dssp TCCEEECC
T ss_pred CCCEEEec
Confidence 98876543
No 50
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=79.66 E-value=35 Score=30.81 Aligned_cols=147 Identities=12% Similarity=0.107 Sum_probs=70.5
Q ss_pred eeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEE
Q 035482 98 SCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEV 177 (378)
Q Consensus 98 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 177 (378)
|.+++|-+.. ...++|||..|++...+-..... .....++.+.+. +.|-++. .. ...+
T Consensus 114 S~~n~lAvgl---d~tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspd-g~~lasg--s~--------------Dg~v 171 (420)
T 4gga_A 114 SSGNVLAVAL---DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKE-GNYLAVG--TS--------------SAEV 171 (420)
T ss_dssp CTTSEEEEEE---TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTT-SSEEEEE--ET--------------TSCE
T ss_pred CCCCEEEEEe---CCEEEEEECCCCCEEEEEEecCC--CCcEEEEEECCC-CCEEEEE--EC--------------CCeE
Confidence 4566665543 47899999999987765332211 123445667774 3443332 11 1457
Q ss_pred EEEEcCCCCeE-EeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEEeCC
Q 035482 178 QILTLGSQEWR-SLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVNLGG 256 (378)
Q Consensus 178 ~Vyss~~~~W~-~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~G 256 (378)
.|++..++.-. ...... .....+..+|.+-..+.. ...+..+|..+.......+..............+|
T Consensus 172 ~iWd~~~~~~~~~~~~h~----~~v~~~s~~~~~l~sgs~-----d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g 242 (420)
T 4gga_A 172 QLWDVQQQKRLRNMTSHS----ARVGSLSWNSYILSSGSR-----SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 242 (420)
T ss_dssp EEEETTTTEEEEEECCCS----SCEEEEEEETTEEEEEET-----TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred EEEEcCCCcEEEEEeCCC----CceEEEeeCCCEEEEEeC-----CCceeEeeecccceeeEEecccccceeeeeecCCC
Confidence 88988877321 111111 111223344544333333 46777788766443332222111111111122245
Q ss_pred eEEEEEeCCCCceEEEEee
Q 035482 257 CLSAAVPCSSGKEIWVMKE 275 (378)
Q Consensus 257 ~L~~v~~~~~~~~iW~l~~ 275 (378)
+..+....+....||.+..
T Consensus 243 ~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 243 RHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp SEEEEEETTSCEEEEESSC
T ss_pred CeeeeeeccccceEEeecc
Confidence 5555544333337777653
No 51
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=78.33 E-value=29 Score=29.16 Aligned_cols=204 Identities=14% Similarity=0.152 Sum_probs=100.8
Q ss_pred eeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCC-CccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCce
Q 035482 97 GSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQ-TQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKS 175 (378)
Q Consensus 97 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~-~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 175 (378)
.+.+|-+.+.+. ....+.++||..+....++...... ......++.+++..+ +++..... . ..
T Consensus 37 ~~~~g~l~v~~~-~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g--~l~v~~~~--~-----------~~ 100 (286)
T 1q7f_A 37 VNAQNDIIVADT-NNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSG--DIIVTERS--P-----------TH 100 (286)
T ss_dssp ECTTCCEEEEEG-GGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTT--EEEEEECG--G-----------GC
T ss_pred ECCCCCEEEEEC-CCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCC--eEEEEcCC--C-----------CC
Confidence 345676666543 3467899998866555555421111 112345666654332 22222110 0 14
Q ss_pred EEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEE
Q 035482 176 EVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVN 253 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~ 253 (378)
.+.+|+.....-+....... ....++.+ +|.+|..... ...|..||...+....+..+.... ....+..
T Consensus 101 ~i~~~d~~g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~~-~p~~i~~ 171 (286)
T 1q7f_A 101 QIQIYNQYGQFVRKFGATIL---QHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHLE-FPNGVVV 171 (286)
T ss_dssp EEEEECTTSCEEEEECTTTC---SCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTCS-SEEEEEE
T ss_pred EEEEECCCCcEEEEecCccC---CCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCCccC-CcEEEEE
Confidence 57778743322222221110 01122333 5887766543 468999998877766665432111 1122332
Q ss_pred -eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc
Q 035482 254 -LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK 332 (378)
Q Consensus 254 -~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~ 332 (378)
-+|+|++.... ...|.+.+..+ .. ..++... +. .....-+++..+|.+++...
T Consensus 172 ~~~g~l~v~~~~--~~~i~~~~~~g---~~--~~~~~~~---g~----------------~~~p~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 172 NDKQEIFISDNR--AHCVKVFNYEG---QY--LRQIGGE---GI----------------TNYPIGVGINSNGEILIADN 225 (286)
T ss_dssp CSSSEEEEEEGG--GTEEEEEETTC---CE--EEEESCT---TT----------------SCSEEEEEECTTCCEEEEEC
T ss_pred CCCCCEEEEECC--CCEEEEEcCCC---CE--EEEEccC---Cc----------------cCCCcEEEECCCCCEEEEeC
Confidence 25776665432 12444444322 11 2223210 00 01223456667888888765
Q ss_pred C-C-eEEEEeCCCCcEEEEEE
Q 035482 333 C-R-ALVSYNPRNEMFKDLLL 351 (378)
Q Consensus 333 ~-~-~l~~yd~~t~~~~~v~~ 351 (378)
. . ++..||.+.+.++.+..
T Consensus 226 ~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 226 HNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp SSSCEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEcc
Confidence 3 3 89999988777777654
No 52
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=78.03 E-value=39 Score=30.46 Aligned_cols=149 Identities=15% Similarity=0.157 Sum_probs=75.8
Q ss_pred eeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceE
Q 035482 97 GSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSE 176 (378)
Q Consensus 97 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 176 (378)
+..+|.|.+.+. ....++.+++.++....+-.... ....|+++|+..+. +.... .. ...
T Consensus 124 d~~~~~ly~~D~-~~~~I~r~~~~g~~~~~~~~~~~----~~p~glavd~~~g~--lY~~d---~~-----------~~~ 182 (386)
T 3v65_B 124 HHRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGL----ESPGGLAVDWVHDK--LYWTD---SG-----------TSR 182 (386)
T ss_dssp ETTTTEEEEEET-TTTEEEEEETTSCCEEEEECSSC----SCCCCEEEETTTTE--EEEEE---TT-----------TTE
T ss_pred ecCCCeEEEEeC-CCCcEEEEecCCCCcEEEEeCCC----CCccEEEEEeCCCe--EEEEc---CC-----------CCe
Confidence 346788888765 45688899998876544422111 11235677765432 22221 00 135
Q ss_pred EEEEEcCCCCeEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEE
Q 035482 177 VQILTLGSQEWRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVN 253 (378)
Q Consensus 177 ~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~ 253 (378)
+++++.....-+.+.... . ....++.+ +|.|||.... ....|..+|++...-..+--. ... ...-|+.
T Consensus 183 I~~~~~dg~~~~~l~~~~--l-~~P~giavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~~~~-~~~-~PnGlav 253 (386)
T 3v65_B 183 IEVANLDGAHRKVLLWQS--L-EKPRAIALHPMEGTIYWTDWG----NTPRIEASSMDGSGRRIIADT-HLF-WPNGLTI 253 (386)
T ss_dssp EEECBTTSCSCEEEECSS--C-SCEEEEEEETTTTEEEEEECS----SSCEEEEEETTSCSCEEEECS-SCS-CEEEEEE
T ss_pred EEEEeCCCCceEEeecCC--C-CCCcEEEEEcCCCeEEEeccC----CCCEEEEEeCCCCCcEEEEEC-CCC-CeeeEEE
Confidence 666666543322221100 0 11223333 5899998765 237899999976544333211 111 1112332
Q ss_pred --eCCeEEEEEeCCCCceEEEEeeCC
Q 035482 254 --LGGCLSAAVPCSSGKEIWVMKEYD 277 (378)
Q Consensus 254 --~~G~L~~v~~~~~~~~iW~l~~~~ 277 (378)
-+|+|+++... ...|+..+-.|
T Consensus 254 d~~~~~lY~aD~~--~~~I~~~d~dG 277 (386)
T 3v65_B 254 DYAGRRMYWVDAK--HHVIERANLDG 277 (386)
T ss_dssp EGGGTEEEEEETT--TTEEEEECTTS
T ss_pred eCCCCEEEEEECC--CCEEEEEeCCC
Confidence 35677777532 23787776443
No 53
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=74.87 E-value=39 Score=28.84 Aligned_cols=203 Identities=11% Similarity=0.076 Sum_probs=98.4
Q ss_pred eeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEE
Q 035482 98 SCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEV 177 (378)
Q Consensus 98 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 177 (378)
..+|-|++.+. ....++.++|.|++...+... ....++++++..+ -++.. . ..+
T Consensus 22 ~~~~~l~~~d~-~~~~i~~~d~~~~~~~~~~~~------~~~~~i~~~~dG~--l~v~~-----~------------~~l 75 (297)
T 3g4e_A 22 EVSNSLLFVDI-PAKKVCRWDSFTKQVQRVTMD------APVSSVALRQSGG--YVATI-----G------------TKF 75 (297)
T ss_dssp TTTTEEEEEET-TTTEEEEEETTTCCEEEEECS------SCEEEEEEBTTSS--EEEEE-----T------------TEE
T ss_pred CCCCEEEEEEC-CCCEEEEEECCCCcEEEEeCC------CceEEEEECCCCC--EEEEE-----C------------CeE
Confidence 33566666554 457899999999877554322 1234566777543 22221 1 457
Q ss_pred EEEEcCCCCeEEeCcccce-eecCCCcEEE--CCeEEEEeccCC------CCCCcEEEEEECCCceEeEEcCCCccCcce
Q 035482 178 QILTLGSQEWRSLGQVNYH-MLEAPSQVLV--NGRLHWCTWPRY------RGPSRLLISFDIADEQFRVVEKPDELHRIH 248 (378)
Q Consensus 178 ~Vyss~~~~W~~~~~~p~~-~~~~~~~v~~--~G~lyw~~~~~~------~~~~~~il~fD~~~e~~~~i~lP~~~~~~~ 248 (378)
.+|+..++..+.+...+.. .......+.+ +|.+|+-..... ......|..+|.....-.... .... .
T Consensus 76 ~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~---~~~~-p 151 (297)
T 3g4e_A 76 CALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD---QVDI-S 151 (297)
T ss_dssp EEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE---EESB-E
T ss_pred EEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee---cccc-c
Confidence 8889888887765432110 0011112223 688665443211 113457888887643222111 0000 0
Q ss_pred eEEEE-eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEE-ccCCCCCccccccCccccccccccCceeEEEEEeeCCc
Q 035482 249 YDLVN-LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNI-GIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGE 326 (378)
Q Consensus 249 ~~l~~-~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 326 (378)
.-+.. -+|+..++... ....||+.+-....+.......+ .. .. ......=+++..+|.
T Consensus 152 ngi~~spdg~~lyv~~~-~~~~i~~~~~d~~~G~~~~~~~~~~~--~~-----------------~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDS-LSYSVDAFDYDLQTGQISNRRSVYKL--EK-----------------EEQIPDGMCIDAEGK 211 (297)
T ss_dssp EEEEECTTSCEEEEEEG-GGTEEEEEEECTTTCCEEEEEEEEEC--CG-----------------GGCEEEEEEEBTTSC
T ss_pred cceEEcCCCCEEEEecC-CCCcEEEEeccCCCCcccCcEEEEEC--CC-----------------CCCCCCeeEECCCCC
Confidence 11222 25653333321 11267766532112333222111 11 00 001123355567888
Q ss_pred EEEEEc-CCeEEEEeCCCCcE-EEEE
Q 035482 327 ILLEYK-CRALVSYNPRNEMF-KDLL 350 (378)
Q Consensus 327 vl~~~~-~~~l~~yd~~t~~~-~~v~ 350 (378)
+++... .+++..||++++++ ..+.
T Consensus 212 lwva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp EEEEEETTTEEEEECTTTCCEEEEEE
T ss_pred EEEEEcCCCEEEEEcCCCceEEEEEE
Confidence 887754 56799999997765 4444
No 54
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=73.82 E-value=50 Score=29.59 Aligned_cols=110 Identities=9% Similarity=0.072 Sum_probs=57.4
Q ss_pred CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCC-C-ccCcceeEEEEe--CCeEEEEEeCCCCceEEEEeeCCCCCce
Q 035482 207 NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKP-D-ELHRIHYDLVNL--GGCLSAAVPCSSGKEIWVMKEYDVKESW 282 (378)
Q Consensus 207 ~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP-~-~~~~~~~~l~~~--~G~L~~v~~~~~~~~iW~l~~~~~~~~W 282 (378)
+|.++..... ...|..+|+.+.+......+ . ........-+.+ +|++.+.........+|.++. .
T Consensus 133 ~~~~~~~~~~-----~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~----~-- 201 (433)
T 3bws_A 133 NTRLAIPLLE-----DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT----L-- 201 (433)
T ss_dssp SSEEEEEBTT-----SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT----C--
T ss_pred CCeEEEEeCC-----CCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC----c--
Confidence 5666655543 45799999998766543222 1 112222333333 566665554222226665532 1
Q ss_pred eeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc--CCeEEEEeCCCCcEEE
Q 035482 283 IKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK--CRALVSYNPRNEMFKD 348 (378)
Q Consensus 283 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~--~~~l~~yd~~t~~~~~ 348 (378)
....++... .....-+++..+|+.++... ++.+..||+++++...
T Consensus 202 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 202 AYKATVDLT---------------------GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp CEEEEEECS---------------------SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEEcCC---------------------CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 122222210 01234456666777665543 5789999998887543
No 55
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=73.63 E-value=32 Score=33.84 Aligned_cols=32 Identities=19% Similarity=0.201 Sum_probs=24.9
Q ss_pred CCCcEEECCeEEEEeccCCCCCCcEEEEEECCC--ceEeE
Q 035482 200 APSQVLVNGRLHWCTWPRYRGPSRLLISFDIAD--EQFRV 237 (378)
Q Consensus 200 ~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~--e~~~~ 237 (378)
...+++.+|.+|..... ..|.++|.+| +.|+.
T Consensus 59 ~~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~ 92 (668)
T 1kv9_A 59 EATPLFHDGVIYTSMSW------SRVIAVDAASGKELWRY 92 (668)
T ss_dssp CCCCEEETTEEEEEEGG------GEEEEEETTTCCEEEEE
T ss_pred ccCCEEECCEEEEECCC------CeEEEEECCCChhceEE
Confidence 35678899999998765 6899999865 55654
No 56
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=72.78 E-value=47 Score=28.85 Aligned_cols=114 Identities=10% Similarity=0.125 Sum_probs=60.1
Q ss_pred EEeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 95 VVGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
.++..+|.|.+.+......+++.++-......+-... ....-|+++|+..+ ++.... .. .
T Consensus 126 avdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~----~~~P~gla~d~~~~--~lY~~D---~~-----------~ 185 (316)
T 1ijq_A 126 VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN----IQWPNGITLDLLSG--RLYWVD---SK-----------L 185 (316)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS----CSCEEEEEEETTTT--EEEEEE---TT-----------T
T ss_pred EeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECC----CCCceEEEEeccCC--EEEEEE---CC-----------C
Confidence 3455688887776433367888887654433331111 12345778887543 233221 11 1
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCc
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADE 233 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e 233 (378)
..+++++.....=+.+............-++.+|.+||.... ...|..+|..+.
T Consensus 186 ~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~-----~~~V~~~~~~~g 239 (316)
T 1ijq_A 186 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII-----NEAIFSANRLTG 239 (316)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT-----TTEEEEEETTTC
T ss_pred CeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECC-----CCeEEEEeCCCC
Confidence 467777776432222211100000011123457999998866 579999998543
No 57
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=72.63 E-value=41 Score=28.08 Aligned_cols=62 Identities=15% Similarity=0.014 Sum_probs=34.0
Q ss_pred CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEEe--CCeEEEEEeCCCCceEEEEee
Q 035482 207 NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVNL--GGCLSAAVPCSSGKEIWVMKE 275 (378)
Q Consensus 207 ~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~~--~G~L~~v~~~~~~~~iW~l~~ 275 (378)
+|.+||.... ...|..+|++...-..+ .+.... ....+..- +|+|++.........|++..-
T Consensus 90 ~~~lyv~d~~-----~~~I~~~~~~g~~~~~~-~~~~~~-~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 90 GRTIFWTDSQ-----LDRIEVAKMDGTQRRVL-FDTGLV-NPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCSCEEE-ECSSCS-SEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred CCeEEEEECC-----CCEEEEEEcCCCCEEEE-EECCCC-CccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 5899998765 57899999976543333 121111 11223332 466776654322236766654
No 58
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=72.32 E-value=48 Score=28.76 Aligned_cols=35 Identities=6% Similarity=-0.064 Sum_probs=23.6
Q ss_pred eEEEEEeeCCcEEEE-EcCCeEEEEeCCC-CcEEEEE
Q 035482 316 VRVLCLLKNGEILLE-YKCRALVSYNPRN-EMFKDLL 350 (378)
Q Consensus 316 ~~~~~~~~~g~vl~~-~~~~~l~~yd~~t-~~~~~v~ 350 (378)
+.-+.+..+|..++. ..++.+..||+++ ++++.+.
T Consensus 259 v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~ 295 (379)
T 3jrp_A 259 LWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAG 295 (379)
T ss_dssp EEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccccc
Confidence 445666678876665 4567799999884 4566554
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=71.69 E-value=55 Score=29.18 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=66.7
Q ss_pred CceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEE-
Q 035482 111 KNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRS- 189 (378)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~- 189 (378)
...+.|||..+++...+-.... ......+.+.+. +.+-++. .. ...+.+|+..++.-..
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~---~~~v~~v~~s~~-~~~l~~~--~~--------------dg~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDE---STYVASVKWSHD-GSFLSVG--LG--------------NGLVDIYDVESQTKLRT 171 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCT---TCCEEEEEECTT-SSEEEEE--ET--------------TSCEEEEETTTCCEEEE
T ss_pred CCeEEEeeCCCCcEeEeeecCC---CCCEEEEEECCC-CCEEEEE--CC--------------CCeEEEEECcCCeEEEE
Confidence 4789999999998766533221 133445667773 3332222 11 1457888888774322
Q ss_pred eCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCce--EeEEcCCCccCcceeEEEEe--CCeEEEEEeCC
Q 035482 190 LGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQ--FRVVEKPDELHRIHYDLVNL--GGCLSAAVPCS 265 (378)
Q Consensus 190 ~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~--~~~i~lP~~~~~~~~~l~~~--~G~L~~v~~~~ 265 (378)
..... ..-..+..+|.+...+.. .+.|..+|+.+.. ...+... .....-+.+ +|.+.++...+
T Consensus 172 ~~~~~----~~v~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 172 MAGHQ----ARVGCLSWNRHVLSSGSR-----SGAIHHHDVRIANHQIGTLQGH----SSEVCGLAWRSDGLQLASGGND 238 (401)
T ss_dssp ECCCS----SCEEEEEEETTEEEEEET-----TSEEEEEETTSSSCEEEEEECC----SSCEEEEEECTTSSEEEEEETT
T ss_pred ecCCC----CceEEEEECCCEEEEEcC-----CCCEEEEecccCcceeeEEcCC----CCCeeEEEEcCCCCEEEEEeCC
Confidence 21111 111223345554444443 5789999997432 2222211 112222222 56665555443
Q ss_pred CCceEEEEee
Q 035482 266 SGKEIWVMKE 275 (378)
Q Consensus 266 ~~~~iW~l~~ 275 (378)
....||.+..
T Consensus 239 ~~v~iwd~~~ 248 (401)
T 4aez_A 239 NVVQIWDARS 248 (401)
T ss_dssp SCEEEEETTC
T ss_pred CeEEEccCCC
Confidence 3337887653
No 60
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=71.63 E-value=59 Score=29.46 Aligned_cols=32 Identities=6% Similarity=0.050 Sum_probs=20.7
Q ss_pred EEEEEeeCCcEEEEEcCCeEEEEeCCCCcEEE
Q 035482 317 RVLCLLKNGEILLEYKCRALVSYNPRNEMFKD 348 (378)
Q Consensus 317 ~~~~~~~~g~vl~~~~~~~l~~yd~~t~~~~~ 348 (378)
.+..+..+|.+|....++.+..||+++++.++
T Consensus 404 s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 404 SLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred EEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 34456678888887778889999999988764
No 61
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=71.53 E-value=57 Score=29.22 Aligned_cols=194 Identities=12% Similarity=0.082 Sum_probs=95.7
Q ss_pred eeCceEEEeecCCCceEEEEcccccceee-CCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceE
Q 035482 98 SCKGLLCLCDSSTKNRLYVYNPFTRNYVE-LPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSE 176 (378)
Q Consensus 98 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 176 (378)
+.+|-+++... ....+.+||+.+++... ++... ....++.+++.. .+ ++... .. ...
T Consensus 178 ~~~~~~~~s~~-~d~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~-l~~~~---~~-----------~~~ 235 (433)
T 3bws_A 178 PEHNELWVSQM-QANAVHVFDLKTLAYKATVDLTG-----KWSKILLYDPIR-DL-VYCSN---WI-----------SED 235 (433)
T ss_dssp GGGTEEEEEEG-GGTEEEEEETTTCCEEEEEECSS-----SSEEEEEEETTT-TE-EEEEE---TT-----------TTE
T ss_pred cCCCEEEEEEC-CCCEEEEEECCCceEEEEEcCCC-----CCeeEEEEcCCC-CE-EEEEe---cC-----------CCc
Confidence 45676666543 34688999998876543 33211 233456677753 22 22211 01 146
Q ss_pred EEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccC-CC--CCCcEEEEEECCCceEeEE-cCCCccCcceeE
Q 035482 177 VQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPR-YR--GPSRLLISFDIADEQFRVV-EKPDELHRIHYD 250 (378)
Q Consensus 177 ~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~-~~--~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~ 250 (378)
+.+|+.+++.....-..... ...+.+ +|...+.+... .. ...+.|..+|+.+.+.... ..+. ....
T Consensus 236 i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~----~~~~ 307 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDKIGL----PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG----NKRH 307 (433)
T ss_dssp EEEEETTTTEEEEECCCCSE----EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE----CEEE
T ss_pred EEEEECCCCcEEEEecCCCC----ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC----Ccce
Confidence 88899888754332111111 111222 45444443321 00 1246899999987655332 2111 1112
Q ss_pred EE-EeCCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEE
Q 035482 251 LV-NLGGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEIL 328 (378)
Q Consensus 251 l~-~~~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl 328 (378)
+. .-+|+..++....+.. .+|.++. ......+... ....-+++..+|+.+
T Consensus 308 ~~~~~~g~~l~~~~~~~~~v~v~d~~~------~~~~~~~~~~----------------------~~~~~~~~s~dg~~l 359 (433)
T 3bws_A 308 IVSGNTENKIYVSDMCCSKIEVYDLKE------KKVQKSIPVF----------------------DKPNTIALSPDGKYL 359 (433)
T ss_dssp EEECSSTTEEEEEETTTTEEEEEETTT------TEEEEEEECS----------------------SSEEEEEECTTSSEE
T ss_pred EEECCCCCEEEEEecCCCEEEEEECCC------CcEEEEecCC----------------------CCCCeEEEcCCCCEE
Confidence 22 2245444343333333 6665542 2223333220 123345666778766
Q ss_pred EEEcC----------------CeEEEEeCCCCcEEEE
Q 035482 329 LEYKC----------------RALVSYNPRNEMFKDL 349 (378)
Q Consensus 329 ~~~~~----------------~~l~~yd~~t~~~~~v 349 (378)
+.... +.+..||+++++....
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 360 YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp EEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred EEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 65442 3899999999876554
No 62
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=70.88 E-value=32 Score=33.90 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=24.5
Q ss_pred CCCcEEECCeEEEEeccCCCCCCcEEEEEECCCc--eEeE
Q 035482 200 APSQVLVNGRLHWCTWPRYRGPSRLLISFDIADE--QFRV 237 (378)
Q Consensus 200 ~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e--~~~~ 237 (378)
...+++.+|.+|..... ..|.++|.+|. .|+.
T Consensus 70 ~~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~ 103 (677)
T 1kb0_A 70 EATPVVVDGIMYVSASW------SVVHAIDTRTGNRIWTY 103 (677)
T ss_dssp CCCCEEETTEEEEECGG------GCEEEEETTTTEEEEEE
T ss_pred eeCCEEECCEEEEECCC------CeEEEEECCCCcEEEEE
Confidence 35678899999988764 68999999764 5544
No 63
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=70.35 E-value=50 Score=28.16 Aligned_cols=147 Identities=11% Similarity=0.103 Sum_probs=74.1
Q ss_pred eEEEEEEcCC-CCeEEeC--cccceeecCCCcEEE--CCe-EEEEeccCCCCCCcEEEEEECCC--ceEe---EEc-CCC
Q 035482 175 SEVQILTLGS-QEWRSLG--QVNYHMLEAPSQVLV--NGR-LHWCTWPRYRGPSRLLISFDIAD--EQFR---VVE-KPD 242 (378)
Q Consensus 175 ~~~~Vyss~~-~~W~~~~--~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~il~fD~~~--e~~~---~i~-lP~ 242 (378)
..+.+|+..+ +...... ............+.+ +|. +|..... ...|..+|+.. .++. .+. +|.
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----~~~i~~~~~~~~~g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----NSSVDVWELKDPHGNIECVQTLDMMPE 225 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----TTEEEEEESSCTTSCCEEEEEEECSCT
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCcEEEEeeccccCc
Confidence 4678888887 6665322 110000001111222 455 5554433 46899999853 3332 232 443
Q ss_pred ccC-ccee-EEEE-eCCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEE
Q 035482 243 ELH-RIHY-DLVN-LGGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRV 318 (378)
Q Consensus 243 ~~~-~~~~-~l~~-~~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (378)
... .... .+.. -+|+..++....... .+|.++..+ +.+.....+.... ...-
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~--~~~~~~~~~~~~~----------------------~~~~ 281 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG--SVLSKEGFQPTET----------------------QPRG 281 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS--CCEEEEEEEECSS----------------------SCCC
T ss_pred cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC--CceEEeeeecCCC----------------------ccce
Confidence 211 1112 2222 256655554444444 888876422 3455555554310 1223
Q ss_pred EEEeeCCcEEEEEc--CCeEEEE--eCCCCcEEEEE
Q 035482 319 LCLLKNGEILLEYK--CRALVSY--NPRNEMFKDLL 350 (378)
Q Consensus 319 ~~~~~~g~vl~~~~--~~~l~~y--d~~t~~~~~v~ 350 (378)
+++..+|+.++... ++.+..| |.++++++.+.
T Consensus 282 ~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 282 FNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp EEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 55666888766654 4666676 88898888775
No 64
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=69.98 E-value=50 Score=31.69 Aligned_cols=120 Identities=8% Similarity=0.055 Sum_probs=62.8
Q ss_pred CCCcEEECCeEEEEeccCCCCCCcEEEEEEC-CC--ceEeEEcCCC--ccC------cceeEEEEeCCeEEEEEeCCCCc
Q 035482 200 APSQVLVNGRLHWCTWPRYRGPSRLLISFDI-AD--EQFRVVEKPD--ELH------RIHYDLVNLGGCLSAAVPCSSGK 268 (378)
Q Consensus 200 ~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~-~~--e~~~~i~lP~--~~~------~~~~~l~~~~G~L~~v~~~~~~~ 268 (378)
...+++.+|.+|..... ...|.++|. ++ +.|+. .++. ... .....++..+|++++... ..
T Consensus 55 ~~~P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg 125 (571)
T 2ad6_A 55 EGAPLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA---NG 125 (571)
T ss_dssp CSCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TS
T ss_pred ccccEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC---CC
Confidence 35678899999998761 268999998 55 45654 2222 100 001123445676665532 12
Q ss_pred eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc------CCeEEEEeCC
Q 035482 269 EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK------CRALVSYNPR 342 (378)
Q Consensus 269 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~------~~~l~~yd~~ 342 (378)
.|..++....+..|.... .-. ..+ + .....|+. .+|.+++... ++.++.||.+
T Consensus 126 ~l~alD~~tG~~~W~~~~--~~~-~~~-----------~-----~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~ 184 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVEV--CDP-KVG-----------S-----TLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLK 184 (571)
T ss_dssp EEEEEETTTCCEEEEEEC--CCG-GGT-----------C-----BCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETT
T ss_pred EEEEEECCCCCEEEEecC--CCC-Ccc-----------c-----eeccCCEE--ECCEEEEEecCCccCCCCEEEEEECC
Confidence 566666322255675431 100 000 0 00011221 1455555443 4689999999
Q ss_pred CCcEEEE
Q 035482 343 NEMFKDL 349 (378)
Q Consensus 343 t~~~~~v 349 (378)
|++...-
T Consensus 185 tG~~~W~ 191 (571)
T 2ad6_A 185 TGELKWR 191 (571)
T ss_dssp TCCEEEE
T ss_pred CCcEEEE
Confidence 9986653
No 65
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=69.73 E-value=65 Score=29.18 Aligned_cols=214 Identities=11% Similarity=0.066 Sum_probs=101.6
Q ss_pred eeeCceEEEeecCCCceEEEEcccccc----eeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCC
Q 035482 97 GSCKGLLCLCDSSTKNRLYVYNPFTRN----YVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGY 172 (378)
Q Consensus 97 ~s~~GLl~~~~~~~~~~~~V~NP~T~~----~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 172 (378)
+..+|.|.+.+. ....++..++..+. ...+-... .....|+++|...+. |.... ..
T Consensus 120 d~~~~~lywsD~-~~~~I~~~~~~g~~~~~~~~~~~~~~----~~~p~glavD~~~~~--lY~~d---~~---------- 179 (400)
T 3p5b_L 120 EVASNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRD----IQAPDGLAVDWIHSN--IYWTD---SV---------- 179 (400)
T ss_dssp ETTTTEEEEEET-TTTEEEEEEC------CCCEEEECSS----CSCEEEEEEETTTTE--EEEEE---TT----------
T ss_pred eeccCceEEEec-CCCeEEEEEcccCCCCCcceEEEeCC----CCCcccEEEEecCCc--eEEEE---CC----------
Confidence 345777877765 34677777776522 22221111 134567888875443 33221 11
Q ss_pred CceEEEEEEcCCCCeEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCccee
Q 035482 173 GKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHY 249 (378)
Q Consensus 173 ~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 249 (378)
...+++++.....-+.+.... .....++.+ +|.|||.... ....|..+|++...-..+-. .... ...
T Consensus 180 -~~~I~~~~~~g~~~~~l~~~~---~~~P~~iavdp~~g~ly~td~~----~~~~I~~~~~dG~~~~~~~~-~~l~-~P~ 249 (400)
T 3p5b_L 180 -LGTVSVADTKGVKRKTLFREN---GSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVT-ENIQ-WPN 249 (400)
T ss_dssp -TTEEEEECTTTCSEEEEEECS---SCCEEEEEEETTTTEEEEEECS----SSCCEEEEETTSCSCEEEEC-SSCS-CEE
T ss_pred -CCeEEEEeCCCCceEEEEeCC---CCCcceEEEecccCeEEEEeCC----CCCEEEEEeCCCCccEEEEE-CCCC-ceE
Confidence 145677777655443332100 011233333 6899998754 23689999997654333311 1111 111
Q ss_pred EEEE--eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEe-eCCc
Q 035482 250 DLVN--LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLL-KNGE 326 (378)
Q Consensus 250 ~l~~--~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~ 326 (378)
-|+. .+|+|+++... ...||..+-.| ....+. +.. ... + -.|.++. .++.
T Consensus 250 glavd~~~~~lY~aD~~--~~~I~~~d~dG-~~~~~~---~~~--~~~----l---------------~~P~gl~v~~~~ 302 (400)
T 3p5b_L 250 GITLDLLSGRLYWVDSK--LHSISSIDVNG-GNRKTI---LED--EKR----L---------------AHPFSLAVFEDK 302 (400)
T ss_dssp EEEEETTTTEEEEEETT--TTEEEEEETTS-CCCEEE---EEC--SST----T---------------SSEEEEEEETTE
T ss_pred EEEEEeCCCEEEEEECC--CCEEEEEeCCC-CccEEE---EeC--CCC----C---------------CCCEEEEEeCCE
Confidence 2332 25677776432 23788887544 222111 110 000 0 1222332 2344
Q ss_pred EEEEE-cCCeEEEEeCCCCcEEEEEEeCCCCeEEEEEEeCCc
Q 035482 327 ILLEY-KCRALVSYNPRNEMFKDLLLHGTPNLFEASVHEGSL 367 (378)
Q Consensus 327 vl~~~-~~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~~sl 367 (378)
+++.. ..+++..+|..+++..++-..+...-....+|-+..
T Consensus 303 lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~~~ 344 (400)
T 3p5b_L 303 VFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLT 344 (400)
T ss_dssp EEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEESGGG
T ss_pred EEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEeecc
Confidence 44443 346799999777765444344444334445555543
No 66
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=69.42 E-value=60 Score=28.70 Aligned_cols=143 Identities=13% Similarity=0.128 Sum_probs=72.8
Q ss_pred CceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEE
Q 035482 100 KGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQI 179 (378)
Q Consensus 100 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~V 179 (378)
.+.|++.. ...+...++.+.+...+-+.. ....++.+|+..+ +|.... .. ...+..
T Consensus 44 ~~~ll~~~---~~~I~~i~~~g~~~~~~~~~~-----~~~~~l~~d~~~~--~ly~~D---~~-----------~~~I~r 99 (349)
T 3v64_C 44 EPVLLFAN---RIDIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRRE--LVFWSD---VT-----------LDRILR 99 (349)
T ss_dssp CCEEEEEC---BSCEEEECTTSCCEEEEECSC-----SCEEEEEEETTTT--EEEEEE---TT-----------TTEEEE
T ss_pred CceeEeec---ccceEEEeCCCCeeEEeecCC-----CceEEEEEecccc--EEEEEe---cc-----------CCceEE
Confidence 45565553 245677777666554432211 2457888887644 333321 11 145666
Q ss_pred EEcCCCCeEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEEe--
Q 035482 180 LTLGSQEWRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVNL-- 254 (378)
Q Consensus 180 yss~~~~W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~~-- 254 (378)
++..++.-+.+.... . ....++.+ +|.+||.... ...|.++|++...-..+. ..... ....++.-
T Consensus 100 ~~~~g~~~~~~~~~~--~-~~p~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~-~~~l~-~P~~iavdp~ 169 (349)
T 3v64_C 100 ANLNGSNVEEVVSTG--L-ESPGGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLL-WQSLE-KPRAIALHPM 169 (349)
T ss_dssp EETTSCSCEEEECSS--C-SCCCEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEE-CTTCS-CEEEEEEETT
T ss_pred EecCCCCceEEEeCC--C-CCccEEEEecCCCeEEEEcCC-----CCeEEEEcCCCCceEEEE-eCCCC-CcceEEEecC
Confidence 777665444331110 0 11233333 6899999765 478999999876543332 11111 11223332
Q ss_pred CCeEEEEEeCCCCceEEEEeeCC
Q 035482 255 GGCLSAAVPCSSGKEIWVMKEYD 277 (378)
Q Consensus 255 ~G~L~~v~~~~~~~~iW~l~~~~ 277 (378)
+|.|+..... ....|++..-.|
T Consensus 170 ~g~ly~td~~-~~~~I~r~~~dG 191 (349)
T 3v64_C 170 EGTIYWTDWG-NTPRIEASSMDG 191 (349)
T ss_dssp TTEEEEEECS-SSCEEEEEETTS
T ss_pred cCeEEEeccC-CCCEEEEEeCCC
Confidence 4666655432 223677765443
No 67
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=68.99 E-value=34 Score=33.77 Aligned_cols=32 Identities=13% Similarity=0.186 Sum_probs=24.5
Q ss_pred CCCcEEECCeEEEEeccCCCCCCcEEEEEECCC--ceEeE
Q 035482 200 APSQVLVNGRLHWCTWPRYRGPSRLLISFDIAD--EQFRV 237 (378)
Q Consensus 200 ~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~--e~~~~ 237 (378)
...+++.+|.+|..... ..|.++|.+| +.|+.
T Consensus 63 ~~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~ 96 (689)
T 1yiq_A 63 EATPIVVDGVMYTTGPF------SVVYALDARDGRLIWKY 96 (689)
T ss_dssp CCCCEEETTEEEEECGG------GCEEEEETTTCCEEEEE
T ss_pred eecCEEECCEEEEEcCC------CeEEEEECCCCceeEEE
Confidence 35678899999997755 6899999865 56654
No 68
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=68.28 E-value=52 Score=27.48 Aligned_cols=198 Identities=10% Similarity=0.066 Sum_probs=99.1
Q ss_pred EEeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 95 VVGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
+....+|-+.+... ....++++||. ++...+..+.. .....++.+|+.. . +.... .. .
T Consensus 62 i~~~~~g~l~v~~~-~~~~i~~~~~~-g~~~~~~~~~~---~~~~~~i~~~~~g-~--l~v~~---~~-----------~ 119 (299)
T 2z2n_A 62 LTISSDGEVWFTEN-AANKIGRITKK-GIIKEYTLPNP---DSAPYGITEGPNG-D--IWFTE---MN-----------G 119 (299)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTS-C--EEEEE---TT-----------T
T ss_pred EEECCCCCEEEeCC-CCCeEEEECCC-CcEEEEeCCCc---CCCceeeEECCCC-C--EEEEe---cC-----------C
Confidence 33445777766643 34678999986 44443321111 1234567777642 2 22211 00 1
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV 252 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~ 252 (378)
..+.+|+. ++.......... .....++.+ +|.+|..... ...|..+|. +.++..+.+|.... ....+.
T Consensus 120 ~~i~~~d~-~g~~~~~~~~~~--~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~ 189 (299)
T 2z2n_A 120 NRIGRITD-DGKIREYELPNK--GSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFKIPTPAS-GPVGIT 189 (299)
T ss_dssp TEEEEECT-TCCEEEEECSST--TCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTC-CEEEEE
T ss_pred ceEEEECC-CCCEEEecCCCC--CCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEeeCCCCCC-cceeEE
Confidence 34666766 555443321100 001122333 5777765543 468999999 77777766664221 112233
Q ss_pred E-eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE
Q 035482 253 N-LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY 331 (378)
Q Consensus 253 ~-~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~ 331 (378)
. -+|+|++.... ...|+.++.. .... .+.. +.. .....-+++..+|.+++..
T Consensus 190 ~~~~g~l~v~~~~--~~~i~~~~~~---g~~~---~~~~--~~~-----------------~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 190 KGNDDALWFVEII--GNKIGRITTS---GEIT---EFKI--PTP-----------------NARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp ECTTSSEEEEETT--TTEEEEECTT---CCEE---EEEC--SST-----------------TCCEEEEEECSTTCEEEEE
T ss_pred ECCCCCEEEEccC--CceEEEECCC---CcEE---EEEC--CCC-----------------CCCceeEEECCCCCEEEec
Confidence 2 25777665431 1255555431 2222 1211 100 0123345566678877776
Q ss_pred -cCCeEEEEeCCCCcEEEEEEe
Q 035482 332 -KCRALVSYNPRNEMFKDLLLH 352 (378)
Q Consensus 332 -~~~~l~~yd~~t~~~~~v~~~ 352 (378)
..+++..||+ +++++.+...
T Consensus 243 ~~~~~i~~~d~-~g~~~~~~~~ 263 (299)
T 2z2n_A 243 WGANKIGRLTS-NNIIEEYPIQ 263 (299)
T ss_dssp TTTTEEEEEET-TTEEEEEECS
T ss_pred cCCceEEEECC-CCceEEEeCC
Confidence 4578999999 5676666544
No 69
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=68.04 E-value=94 Score=30.37 Aligned_cols=143 Identities=16% Similarity=0.069 Sum_probs=71.8
Q ss_pred ceEEEEccccccee--eCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEE
Q 035482 112 NRLYVYNPFTRNYV--ELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRS 189 (378)
Q Consensus 112 ~~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~ 189 (378)
.++++++.-|++.. .+-..+... ....+..+.+. +.|-++... ... ....+.+++..++.|+.
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~--~~~~~~~~SpD-G~~l~~~~~--~~~----------~~~~l~~~~~~~~~~~~ 266 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDP--TTFLQSDLSRD-GKYLFVYIL--RGW----------SENDVYWKRPGEKDFRL 266 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCT--TCEEEEEECTT-SCCEEEEEE--ETT----------TEEEEEEECTTCSSCEE
T ss_pred CEEEEEECCCCchhceEEEecCCCC--EEEEEEEECCC-CCEEEEEEe--CCC----------CceEEEEEcCCCCceEE
Confidence 35899998887732 222211111 22334555664 344444332 110 01456666666678877
Q ss_pred eCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCce---EeEEcCCCccCcceeEEEEeCCeEEEEEeCCC
Q 035482 190 LGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQ---FRVVEKPDELHRIHYDLVNLGGCLSAAVPCSS 266 (378)
Q Consensus 190 ~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~---~~~i~lP~~~~~~~~~l~~~~G~L~~v~~~~~ 266 (378)
+...... ....+.-+|.+|..... ......|..+|+++.. |..+-.+.. ...-..+...+|+|.+....+.
T Consensus 267 l~~~~~~---~~~~~~~~g~l~~~s~~--~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~l~~~~~~~~~lv~~~~~dg 340 (695)
T 2bkl_A 267 LVKGVGA---KYEVHAWKDRFYVLTDE--GAPRQRVFEVDPAKPARASWKEIVPEDS-SASLLSVSIVGGHLSLEYLKDA 340 (695)
T ss_dssp EEECSSC---CEEEEEETTEEEEEECT--TCTTCEEEEEBTTBCSGGGCEEEECCCS-SCEEEEEEEETTEEEEEEEETT
T ss_pred eecCCCc---eEEEEecCCcEEEEECC--CCCCCEEEEEeCCCCCccCCeEEecCCC-CCeEEEEEEECCEEEEEEEECC
Confidence 6422111 11223356776555432 2235789999997643 666533221 1111123334777766654333
Q ss_pred CceEEEEee
Q 035482 267 GKEIWVMKE 275 (378)
Q Consensus 267 ~~~iW~l~~ 275 (378)
...||+++.
T Consensus 341 ~~~l~~~~~ 349 (695)
T 2bkl_A 341 TSEVRVATL 349 (695)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEEeC
Confidence 339999874
No 70
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=67.24 E-value=35 Score=33.12 Aligned_cols=32 Identities=9% Similarity=0.117 Sum_probs=24.0
Q ss_pred CCcEEECCeEEEEeccCCCCCCcEEEEEEC-CC--ceEeE
Q 035482 201 PSQVLVNGRLHWCTWPRYRGPSRLLISFDI-AD--EQFRV 237 (378)
Q Consensus 201 ~~~v~~~G~lyw~~~~~~~~~~~~il~fD~-~~--e~~~~ 237 (378)
..+++.+|.+|..... ...|.++|. ++ +.|+.
T Consensus 56 ~tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQD 90 (599)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEE
T ss_pred eccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEE
Confidence 5678899999998751 268999999 55 45654
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=67.20 E-value=68 Score=28.48 Aligned_cols=199 Identities=13% Similarity=0.080 Sum_probs=96.5
Q ss_pred CceEEEeecCCCceEEEEcccccceeeC---CCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceE
Q 035482 100 KGLLCLCDSSTKNRLYVYNPFTRNYVEL---PKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSE 176 (378)
Q Consensus 100 ~GLl~~~~~~~~~~~~V~NP~T~~~~~L---P~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 176 (378)
+|-+++... ....+.|||..+++...- |.............+.+.+....+ ++... . ...
T Consensus 93 ~~~~l~s~s-~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~-l~s~~----~-----------dg~ 155 (402)
T 2aq5_A 93 NDNVIASGS-EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNV-LLSAG----C-----------DNV 155 (402)
T ss_dssp CTTEEEEEE-TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTE-EEEEE----T-----------TSC
T ss_pred CCCEEEEEe-CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCE-EEEEc----C-----------CCE
Confidence 454444432 456799999888754221 000000111334456666653232 22211 1 145
Q ss_pred EEEEEcCCCCeEE-e--CcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeE-EcCCCccCcceeE
Q 035482 177 VQILTLGSQEWRS-L--GQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRV-VEKPDELHRIHYD 250 (378)
Q Consensus 177 ~~Vyss~~~~W~~-~--~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~ 250 (378)
+.||+.+++.... + ....... ..+.+ +|.....+.. .+.|..+|+.+.+-.. +..... ......
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~ 225 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDTI----YSVDWSRDGALICTSCR-----DKRVRVIEPRKGTVVAEKDRPHE-GTRPVH 225 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSCE----EEEEECTTSSCEEEEET-----TSEEEEEETTTTEEEEEEECSSC-SSSCCE
T ss_pred EEEEECCCCCccEEEecCCCCCce----EEEEECCCCCEEEEEec-----CCcEEEEeCCCCceeeeeccCCC-CCcceE
Confidence 7889988875432 2 1111111 11222 4554444433 4789999998765433 212221 111112
Q ss_pred EE-EeCCeEEEEEeC--CCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCc
Q 035482 251 LV-NLGGCLSAAVPC--SSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGE 326 (378)
Q Consensus 251 l~-~~~G~L~~v~~~--~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 326 (378)
+. .-+|++.++... .+.. .||.+.... .=.....++. ...+.-+.+..+|.
T Consensus 226 ~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~---~~~~~~~~~~----------------------~~~v~~~~~s~~~~ 280 (402)
T 2aq5_A 226 AVFVSEGKILTTGFSRMSERQVALWDTKHLE---EPLSLQELDT----------------------SSGVLLPFFDPDTN 280 (402)
T ss_dssp EEECSTTEEEEEEECTTCCEEEEEEETTBCS---SCSEEEECCC----------------------CSSCEEEEEETTTT
T ss_pred EEEcCCCcEEEEeccCCCCceEEEEcCcccc---CCceEEeccC----------------------CCceeEEEEcCCCC
Confidence 22 236776666542 2333 778765422 1011122111 01234456667888
Q ss_pred EEEEEc--CCeEEEEeCCCCc--EEEEE
Q 035482 327 ILLEYK--CRALVSYNPRNEM--FKDLL 350 (378)
Q Consensus 327 vl~~~~--~~~l~~yd~~t~~--~~~v~ 350 (378)
.++... ++.+..||.++++ ++.+.
T Consensus 281 ~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 281 IVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp EEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred EEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 776543 6789999999987 55554
No 72
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=66.72 E-value=61 Score=27.70 Aligned_cols=209 Identities=6% Similarity=-0.089 Sum_probs=97.0
Q ss_pred eeeCce-EEEeecCCCceEEEEcc-cccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 97 GSCKGL-LCLCDSSTKNRLYVYNP-FTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 97 ~s~~GL-l~~~~~~~~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
-+.+|- .++... ....+.+||. .+++...+.... ......++.+.+ +.+-+.. . . .
T Consensus 64 ~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~---~~~~v~~l~~~~--~~~l~s~-~----~-----------d 121 (342)
T 1yfq_A 64 FIDNTDLQIYVGT-VQGEILKVDLIGSPSFQALTNNE---ANLGICRICKYG--DDKLIAA-S----W-----------D 121 (342)
T ss_dssp EEESSSEEEEEEE-TTSCEEEECSSSSSSEEECBSCC---CCSCEEEEEEET--TTEEEEE-E----T-----------T
T ss_pred ECCCCCcEEEEEc-CCCeEEEEEeccCCceEeccccC---CCCceEEEEeCC--CCEEEEE-c----C-----------C
Confidence 344555 433332 4578999999 888877665410 112344566777 3333322 1 1 1
Q ss_pred eEEEEEEcCCCC-------eEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCC-c--eEeEEcCCCcc
Q 035482 175 SEVQILTLGSQE-------WRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIAD-E--QFRVVEKPDEL 244 (378)
Q Consensus 175 ~~~~Vyss~~~~-------W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~-e--~~~~i~lP~~~ 244 (378)
..+.+|+.++.. .+.+..... ......+.+.+.-...+.. .+.|..+|+.+ . .......+..
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~- 193 (342)
T 1yfq_A 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKV--KNKIFTMDTNSSRLIVGMN-----NSQVQWFRLPLCEDDNGTIEESGLK- 193 (342)
T ss_dssp SEEEEECHHHHTTBCEEEEESCSSSSSS--CCCEEEEEECSSEEEEEES-----TTEEEEEESSCCTTCCCEEEECSCS-
T ss_pred CeEEEEcccccccccccccCCeeeEEee--CCceEEEEecCCcEEEEeC-----CCeEEEEECCccccccceeeecCCC-
Confidence 456777766400 111111110 0111122222222222222 46899999987 3 2333333321
Q ss_pred CcceeEEEEe--CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEe
Q 035482 245 HRIHYDLVNL--GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLL 322 (378)
Q Consensus 245 ~~~~~~l~~~--~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (378)
.....+... +|++.++........||.++..+..........+....... . . ......+.-+++.
T Consensus 194 -~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~--~---~-------~~~~~~i~~~~~s 260 (342)
T 1yfq_A 194 -YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL--K---D-------TNLAYPVNSIEFS 260 (342)
T ss_dssp -SCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT--T---C-------CSSCCCEEEEEEC
T ss_pred -CceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccc--c---c-------cccceeEEEEEEc
Confidence 111223333 46666555542223888886542111122223332210000 0 0 0001134556667
Q ss_pred eCCcEEEEE-cCCeEEEEeCCCCcEEE
Q 035482 323 KNGEILLEY-KCRALVSYNPRNEMFKD 348 (378)
Q Consensus 323 ~~g~vl~~~-~~~~l~~yd~~t~~~~~ 348 (378)
.+|..++.. .++.+..||+++++...
T Consensus 261 ~~~~~l~~~~~dg~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 261 PRHKFLYTAGSDGIISCWNLQTRKKIK 287 (342)
T ss_dssp TTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCEEEEecCCceEEEEcCccHhHhh
Confidence 777766654 46789999999887543
No 73
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=66.51 E-value=75 Score=28.70 Aligned_cols=184 Identities=10% Similarity=0.033 Sum_probs=94.5
Q ss_pred ceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEeC
Q 035482 112 NRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSLG 191 (378)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~ 191 (378)
..++++|..|++...+.... ....++.+.|.. .+ ++.... .. ....+.+++..++..+.+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~-----~~~~~~~~spdg-~~-la~~~~-~~-----------g~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP-----RHNGAPAFSPDG-SK-LAFALS-KT-----------GSLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS-----SCEEEEEECTTS-SE-EEEEEC-TT-----------SSCEEEEEETTTCCEEECC
T ss_pred cEEEEEECCCCcEEEeecCC-----CcccCEEEcCCC-CE-EEEEEe-cC-----------CCceEEEEECCCCCEEeCc
Confidence 58999999999887764422 123455666653 32 322211 11 1156888999888766554
Q ss_pred cccceeecCCCcEE-ECCe-EEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE-EeCCeEEEEEeCCCC-
Q 035482 192 QVNYHMLEAPSQVL-VNGR-LHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV-NLGGCLSAAVPCSSG- 267 (378)
Q Consensus 192 ~~p~~~~~~~~~v~-~~G~-lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~G~L~~v~~~~~~- 267 (378)
..+.... ...+ -+|. ++..... .....|..+|+.+.....+.... .....+. .-+|+..++......
T Consensus 264 ~~~~~~~---~~~~spdg~~l~~~s~~---~g~~~i~~~d~~~~~~~~l~~~~---~~~~~~~~spdG~~l~~~~~~~g~ 334 (415)
T 2hqs_A 264 DGRSNNT---EPTWFPDSQNLAFTSDQ---AGRPQVYKVNINGGAPQRITWEG---SQNQDADVSSDGKFMVMVSSNGGQ 334 (415)
T ss_dssp CCSSCEE---EEEECTTSSEEEEEECT---TSSCEEEEEETTSSCCEECCCSS---SEEEEEEECTTSSEEEEEEECSSC
T ss_pred CCCCccc---ceEECCCCCEEEEEECC---CCCcEEEEEECCCCCEEEEecCC---CcccCeEECCCCCEEEEEECcCCc
Confidence 3221110 0111 1454 4444432 12347888999887654443221 1111222 236765554443333
Q ss_pred ceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE-cCC---eEEEEeCCC
Q 035482 268 KEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY-KCR---ALVSYNPRN 343 (378)
Q Consensus 268 ~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~-~~~---~l~~yd~~t 343 (378)
..|++++-.. +.. ..+.. . ....-+.+..+|+.++.. .++ .++.+|+++
T Consensus 335 ~~i~~~d~~~--~~~---~~l~~--~--------------------~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 335 QHIAKQDLAT--GGV---QVLSS--T--------------------FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp EEEEEEETTT--CCE---EECCC--S--------------------SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred eEEEEEECCC--CCE---EEecC--C--------------------CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 3676665432 222 11111 0 012335566788766553 333 699999998
Q ss_pred CcEEEEE
Q 035482 344 EMFKDLL 350 (378)
Q Consensus 344 ~~~~~v~ 350 (378)
+..+.+.
T Consensus 388 ~~~~~l~ 394 (415)
T 2hqs_A 388 RFKARLP 394 (415)
T ss_dssp CCEEECC
T ss_pred CcEEEee
Confidence 8877764
No 74
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=66.42 E-value=53 Score=29.43 Aligned_cols=109 Identities=13% Similarity=0.182 Sum_probs=56.4
Q ss_pred EEEeecCC--CceEEEE--cccccceeeCCCC--CCCCCccEEEEEEE--eCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 103 LCLCDSST--KNRLYVY--NPFTRNYVELPKS--TEFQTQDVVFGFGF--HPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 103 l~~~~~~~--~~~~~V~--NP~T~~~~~LP~~--~~~~~~~~~~~l~~--d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
+.+...+. .+++.|+ ||.|++...+..+ +........+|+++ ++.++.+.++..... +. .
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~----G~--------~ 155 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE----GE--------F 155 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS----SE--------E
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC----Ce--------E
Confidence 43444334 5666666 9999998888432 10000123344554 777776666654321 11 1
Q ss_pred eEEEEEEcCCCCeEE--eCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECC
Q 035482 175 SEVQILTLGSQEWRS--LGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIA 231 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~--~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~ 231 (378)
..+++.....+.... +..++.. .+..+..+ .|.||.-... ..|..||.+
T Consensus 156 ~q~~l~~~~~g~~~~~lVR~f~lg--sq~EgcvvDd~~g~Lyv~eEd------~GIw~~da~ 209 (355)
T 3amr_A 156 EQYELKADKNGYISGKKVRAFKMN--SQTEGMAADDEYGRLYIAEED------EAIWKFSAE 209 (355)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECS--SCEEEEEEETTTTEEEEEETT------TEEEEEECS
T ss_pred EEEEEEeCCCCcccceEEEEecCC--CCcceEEEcCCCCeEEEeccc------ceEEEEeCC
Confidence 344555556664432 2222111 12223344 4888887665 569999965
No 75
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=66.34 E-value=77 Score=28.75 Aligned_cols=215 Identities=7% Similarity=0.015 Sum_probs=105.0
Q ss_pred EEeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 95 VVGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
+.-..+|-|.+.+. ....+.++++.+++...+...... .. +++++..+ .++.... .. .
T Consensus 136 la~d~~g~lyv~d~-~~~~I~~id~~~g~~~~~~~~~~~---~~---ia~~~~g~--~l~~~d~--~~-----------~ 193 (409)
T 3hrp_A 136 IAAVGNNTVLAYQR-DDPRVRLISVDDNKVTTVHPGFKG---GK---PAVTKDKQ--RVYSIGW--EG-----------T 193 (409)
T ss_dssp EEECSTTEEEEEET-TTTEEEEEETTTTEEEEEEETCCB---CB---CEECTTSS--EEEEEBS--ST-----------T
T ss_pred EEEeCCCCEEEEec-CCCcEEEEECCCCEEEEeeccCCC---Cc---eeEecCCC--cEEEEec--CC-----------C
Confidence 34446787777664 457899999999887766433111 11 45566533 2222210 00 0
Q ss_pred eEEEEEEcCCCC-eEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEEc---CCCccCcc
Q 035482 175 SEVQILTLGSQE-WRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVE---KPDELHRI 247 (378)
Q Consensus 175 ~~~~Vyss~~~~-W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~---lP~~~~~~ 247 (378)
..+.+++..++. .+..............++.+ +|.+|+. .. ...|..+|+++.....+. ........
T Consensus 194 ~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d~-----~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 194 HTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV-DS-----NKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp CEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE-CT-----TCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred ceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE-EC-----CCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 256667665542 23331111100111222332 6899993 32 368999999887655551 11111111
Q ss_pred ee-EEEEe--CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeC
Q 035482 248 HY-DLVNL--GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKN 324 (378)
Q Consensus 248 ~~-~l~~~--~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (378)
.. .+..- +|.|++... ....|++++..+ . ....+......+.... +. .........=+++..+
T Consensus 268 P~~~ia~~p~~g~lyv~d~--~~~~I~~~~~~g---~--~~~~~g~~~~~g~~dg---~~----~~~~~~~P~gia~d~d 333 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQ--NLSSVYKITPDG---E--CEWFCGSATQKTVQDG---LR----EEALFAQPNGMTVDED 333 (409)
T ss_dssp SCCEEEEETTTTEEEEEET--TTTEEEEECTTC---C--EEEEEECTTCCSCBCE---EG----GGCBCSSEEEEEECTT
T ss_pred ccccEEEeCCCCEEEEEeC--CCCEEEEEecCC---C--EEEEEeCCCCCCcCCC---cc----cccEeCCCeEEEEeCC
Confidence 01 34433 467766643 223777776433 1 1111121000010000 00 0000012234566678
Q ss_pred CcEEEEEc--CCeEEEEeCCCCcEEEEEE
Q 035482 325 GEILLEYK--CRALVSYNPRNEMFKDLLL 351 (378)
Q Consensus 325 g~vl~~~~--~~~l~~yd~~t~~~~~v~~ 351 (378)
|++++... ..++..+|+.++++..+..
T Consensus 334 G~lyvad~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 334 GNFYIVDGFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp CCEEEEETTTTCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEeCCCCCEEEEEECCCCEEEEEeC
Confidence 88777653 5789999988898877764
No 76
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=66.10 E-value=71 Score=28.24 Aligned_cols=149 Identities=15% Similarity=0.149 Sum_probs=77.6
Q ss_pred eeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceE
Q 035482 97 GSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSE 176 (378)
Q Consensus 97 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 176 (378)
+..+|.|.+.+. ....++.+++.++....+..... ....|+++|+..+. +..... . ...
T Consensus 81 d~~~~~ly~~D~-~~~~I~r~~~~g~~~~~~~~~~~----~~p~glavd~~~g~--ly~~d~---~-----------~~~ 139 (349)
T 3v64_C 81 HHRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGL----ESPGGLAVDWVHDK--LYWTDS---G-----------TSR 139 (349)
T ss_dssp ETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSC----SCCCEEEEETTTTE--EEEEET---T-----------TTE
T ss_pred eccccEEEEEec-cCCceEEEecCCCCceEEEeCCC----CCccEEEEecCCCe--EEEEcC---C-----------CCe
Confidence 446788888765 45688899998876554422111 12246777875432 222210 1 146
Q ss_pred EEEEEcCCCCeEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEE
Q 035482 177 VQILTLGSQEWRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVN 253 (378)
Q Consensus 177 ~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~ 253 (378)
+++++.....-+.+.... . ....++.+ +|.+||.... ....|..+|++...-..+ +..... ...-|+.
T Consensus 140 I~~~~~dG~~~~~l~~~~--l-~~P~~iavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~-~~~~~~-~PnGla~ 210 (349)
T 3v64_C 140 IEVANLDGAHRKVLLWQS--L-EKPRAIALHPMEGTIYWTDWG----NTPRIEASSMDGSGRRII-ADTHLF-WPNGLTI 210 (349)
T ss_dssp EEEEETTSCSCEEEECTT--C-SCEEEEEEETTTTEEEEEECS----SSCEEEEEETTSCSCEES-CCSSCS-CEEEEEE
T ss_pred EEEEcCCCCceEEEEeCC--C-CCcceEEEecCcCeEEEeccC----CCCEEEEEeCCCCCcEEE-EECCCC-CcceEEE
Confidence 777777654322221100 0 11123333 6899999765 237899999976543332 111111 1112332
Q ss_pred --eCCeEEEEEeCCCCceEEEEeeCC
Q 035482 254 --LGGCLSAAVPCSSGKEIWVMKEYD 277 (378)
Q Consensus 254 --~~G~L~~v~~~~~~~~iW~l~~~~ 277 (378)
.+|+|+++... ...|+..+-.|
T Consensus 211 d~~~~~lY~aD~~--~~~I~~~~~dG 234 (349)
T 3v64_C 211 DYAGRRMYWVDAK--HHVIERANLDG 234 (349)
T ss_dssp ETTTTEEEEEETT--TTEEEEEETTS
T ss_pred eCCCCEEEEEECC--CCEEEEEeCCC
Confidence 25677776532 22777776443
No 77
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=66.00 E-value=1.1e+02 Score=30.39 Aligned_cols=191 Identities=13% Similarity=0.104 Sum_probs=94.2
Q ss_pred CceEEEEcccccceeeCCCCC-----CCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCC
Q 035482 111 KNRLYVYNPFTRNYVELPKST-----EFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQ 185 (378)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~-----~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~ 185 (378)
...+..++|.++.+..+...+ ..-......++..|... . +.+.... ..+..|+..++
T Consensus 332 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~---lWigt~~--------------~Gl~~~~~~~~ 393 (781)
T 3v9f_A 332 GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-K---LWIGTDG--------------GGINVFENGKR 393 (781)
T ss_dssp SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS-C---EEEEEBS--------------SCEEEEETTEE
T ss_pred CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC-C---EEEEeCC--------------CcEEEEECCCC
Confidence 356788888888776654321 11111234445555432 1 2222111 23556666666
Q ss_pred CeEEeCcccceee-cCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEEe-CCeEEEE
Q 035482 186 EWRSLGQVNYHML-EAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVNL-GGCLSAA 261 (378)
Q Consensus 186 ~W~~~~~~p~~~~-~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~~-~G~L~~v 261 (378)
.++.... +.... ..-.+++. +|.+ |++.. ...|..||..+.++..+..+.........+.+- +|.|.+.
T Consensus 394 ~~~~~~~-~~~~~~~~v~~i~~d~~g~l-Wigt~-----~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig 466 (781)
T 3v9f_A 394 VAIYNKE-NRELLSNSVLCSLKDSEGNL-WFGTY-----LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG 466 (781)
T ss_dssp EEECC------CCCSBEEEEEECTTSCE-EEEET-----TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE
T ss_pred eEEEccC-CCCCCCcceEEEEECCCCCE-EEEec-----cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE
Confidence 5554321 11000 11112233 4554 55543 368999999999998875431111111233332 4566555
Q ss_pred EeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEcCCeEEEEeC
Q 035482 262 VPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYKCRALVSYNP 341 (378)
Q Consensus 262 ~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~~~~l~~yd~ 341 (378)
.. ..|+.++.. ...|........ ..+ ....+.-+....+|.+++-...++++.||+
T Consensus 467 t~----~Gl~~~~~~--~~~~~~~~~~~~---~~~---------------~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~ 522 (781)
T 3v9f_A 467 TH----AGVFVIDLA--SKKVIHHYDTSN---SQL---------------LENFVRSIAQDSEGRFWIGTFGGGVGIYTP 522 (781)
T ss_dssp ET----TEEEEEESS--SSSCCEEECTTT---SSC---------------SCSCEEEEEECTTCCEEEEESSSCEEEECT
T ss_pred EC----CceEEEeCC--CCeEEecccCcc---ccc---------------ccceeEEEEEcCCCCEEEEEcCCCEEEEeC
Confidence 43 144455432 234543322110 000 001344455667889988887667999999
Q ss_pred CCCcEEEEE
Q 035482 342 RNEMFKDLL 350 (378)
Q Consensus 342 ~t~~~~~v~ 350 (378)
++++++.+.
T Consensus 523 ~~~~~~~~~ 531 (781)
T 3v9f_A 523 DMQLVRKFN 531 (781)
T ss_dssp TCCEEEEEC
T ss_pred CCCeEEEcc
Confidence 999887754
No 78
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=65.60 E-value=67 Score=27.82 Aligned_cols=133 Identities=11% Similarity=0.060 Sum_probs=65.3
Q ss_pred ceEEEEcccccceeeC-CCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCC---CCe
Q 035482 112 NRLYVYNPFTRNYVEL-PKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGS---QEW 187 (378)
Q Consensus 112 ~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~---~~W 187 (378)
..+.+.++.+++...+ |.. ....|+.+|+..+. |..... . ...+..++..+ ++-
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~------~~p~g~~~d~~~~~--ly~~D~---~-----------~~~I~~~~~~g~~~~~~ 67 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNL------RNVVALDTEVASNR--IYWSDL---S-----------QRMICSTQLDRAHGVSS 67 (316)
T ss_dssp SSEEEEETTSCCCEEEECSC------SSEEEEEEETTTTE--EEEEET---T-----------TTEEEEEEC--------
T ss_pred CeEEEEECCCcceEehhcCC------CceEEEEEEeCCCE--EEEEEC---C-----------CCcEEEEECCCCCCCcc
Confidence 5677788877765543 332 34567888876432 333211 1 14566666654 121
Q ss_pred -EEeCcccceeecCCCcEE---ECCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEE--eCCeEEEE
Q 035482 188 -RSLGQVNYHMLEAPSQVL---VNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVN--LGGCLSAA 261 (378)
Q Consensus 188 -~~~~~~p~~~~~~~~~v~---~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~--~~G~L~~v 261 (378)
..+- +... ....++. .+|.+||.... ...|.++|++...-..+--.. .. ....++. .+|.|+..
T Consensus 68 ~~~~~--~~~~-~~p~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~-~~-~P~~iavdp~~g~ly~~ 137 (316)
T 1ijq_A 68 YDTVI--SRDI-QAPDGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFREN-GS-KPRAIVVDPVHGFMYWT 137 (316)
T ss_dssp CEEEE--CSSC-SCCCEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECT-TC-CEEEEEEETTTTEEEEE
T ss_pred cEEEE--eCCC-CCcCEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECC-CC-CcceEEeCCCCCEEEEE
Confidence 1111 1001 1223333 36899998765 578999999875444331111 11 1122333 25666665
Q ss_pred EeCCCCceEEEEeeCC
Q 035482 262 VPCSSGKEIWVMKEYD 277 (378)
Q Consensus 262 ~~~~~~~~iW~l~~~~ 277 (378)
... ....|++..-.|
T Consensus 138 d~~-~~~~I~~~~~dG 152 (316)
T 1ijq_A 138 DWG-TPAKIKKGGLNG 152 (316)
T ss_dssp ECS-SSCEEEEEETTS
T ss_pred ccC-CCCeEEEEcCCC
Confidence 432 213677765433
No 79
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=65.23 E-value=66 Score=27.58 Aligned_cols=113 Identities=8% Similarity=0.008 Sum_probs=60.2
Q ss_pred CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEE-eCCeEEEEEeCCCC--ceEEEEeeCCCCCcee
Q 035482 207 NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVN-LGGCLSAAVPCSSG--KEIWVMKEYDVKESWI 283 (378)
Q Consensus 207 ~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~-~~G~L~~v~~~~~~--~~iW~l~~~~~~~~W~ 283 (378)
+|.+||.... ...|..+|+++.++..+..+.. .....+.. -+|+|.+....... ..|++++..+ .. .
T Consensus 55 ~g~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~--~~-~ 124 (333)
T 2dg1_A 55 QGQLFLLDVF-----EGNIFKINPETKEIKRPFVSHK--ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG--DN-L 124 (333)
T ss_dssp TSCEEEEETT-----TCEEEEECTTTCCEEEEEECSS--SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS--CS-C
T ss_pred CCCEEEEECC-----CCEEEEEeCCCCcEEEEeeCCC--CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC--CE-E
Confidence 6888887654 4689999999888776532211 11122333 26777766543211 2666665322 11 1
Q ss_pred eEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc-------CCeEEEEeCCCCcEEEE
Q 035482 284 KEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK-------CRALVSYNPRNEMFKDL 349 (378)
Q Consensus 284 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~-------~~~l~~yd~~t~~~~~v 349 (378)
. ..+... .. .....-+.+..+|.+++... ..+++.+|+++++++.+
T Consensus 125 ~-~~~~~~-~~------------------~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 125 Q-DIIEDL-ST------------------AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp E-EEECSS-SS------------------CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred E-EEEccC-cc------------------CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 1 111100 00 01233355556777777654 25688888887776654
No 80
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=65.18 E-value=60 Score=27.08 Aligned_cols=198 Identities=12% Similarity=0.103 Sum_probs=99.1
Q ss_pred EEeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 95 VVGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
+....+|-+.+... ....++++||. ++...++.+.. .....++.+|+.. . +.... .. .
T Consensus 67 i~~~~~g~l~v~~~-~~~~v~~~d~~-g~~~~~~~~~~---~~~~~~i~~~~~g-~--l~v~~---~~-----------~ 124 (300)
T 2qc5_A 67 LIVSSLGDIWFTEN-GANKIGKLSKK-GGFTEYPLPQP---DSGPYGITEGLNG-D--IWFTQ---LN-----------G 124 (300)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSST---TCCEEEEEECSTT-C--EEEEE---TT-----------T
T ss_pred EEECCCCCEEEEec-CCCeEEEECCC-CCeEEecCCCC---CCCCccceECCCC-C--EEEEc---cC-----------C
Confidence 33446677766643 34678999998 66654432111 1234566677642 2 22211 00 1
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV 252 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~ 252 (378)
..+.+|+.. +....... +... ....++.+ +|.+|+.... ...|..||. +.++..+.+|.... ....+.
T Consensus 125 ~~i~~~~~~-g~~~~~~~-~~~~-~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~ 194 (300)
T 2qc5_A 125 DRIGKLTAD-GTIYEYDL-PNKG-SYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPLPTNAA-APVGIT 194 (300)
T ss_dssp TEEEEECTT-SCEEEEEC-SSTT-CCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSSTTC-CEEEEE
T ss_pred CeEEEECCC-CCEEEccC-CCCC-CCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeCCCCCC-CcceEE
Confidence 345666665 55443321 1000 11122333 5787766543 468999999 66666666654221 112232
Q ss_pred Ee-CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE
Q 035482 253 NL-GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY 331 (378)
Q Consensus 253 ~~-~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~ 331 (378)
.- +|.|++.... ...|++++.. +.... ..+ +.. .....-+++..+|.+++..
T Consensus 195 ~d~~g~l~v~~~~--~~~i~~~~~~---g~~~~-~~~----~~~-----------------~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 195 SGNDGALWFVEIM--GNKIGRITTT---GEISE-YDI----PTP-----------------NARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp ECTTSSEEEEETT--TTEEEEECTT---CCEEE-EEC----SST-----------------TCCEEEEEECSTTCEEEEE
T ss_pred ECCCCCEEEEccC--CCEEEEEcCC---CcEEE-EEC----CCC-----------------CCCceEEEECCCCCEEEec
Confidence 22 5676665432 1245555432 22221 111 100 0122345566678877776
Q ss_pred c-CCeEEEEeCCCCcEEEEEEe
Q 035482 332 K-CRALVSYNPRNEMFKDLLLH 352 (378)
Q Consensus 332 ~-~~~l~~yd~~t~~~~~v~~~ 352 (378)
. .+++..||+ +++++.+...
T Consensus 248 ~~~~~i~~~~~-~g~~~~~~~~ 268 (300)
T 2qc5_A 248 WGANQIGRITN-DNTIQEYQLQ 268 (300)
T ss_dssp TTTTEEEEECT-TSCEEEEECC
T ss_pred cCCCeEEEECC-CCcEEEEECC
Confidence 4 478999999 5666665443
No 81
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=64.57 E-value=83 Score=28.53 Aligned_cols=118 Identities=11% Similarity=0.130 Sum_probs=66.8
Q ss_pred CCeEEEEeccCCCCCCcEEEEEECCCceEeEE---cC-C-----CccCcceeE-EEE-eC-CeEEEEEeC------CCCc
Q 035482 207 NGRLHWCTWPRYRGPSRLLISFDIADEQFRVV---EK-P-----DELHRIHYD-LVN-LG-GCLSAAVPC------SSGK 268 (378)
Q Consensus 207 ~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i---~l-P-----~~~~~~~~~-l~~-~~-G~L~~v~~~------~~~~ 268 (378)
+|.++|.+.. +.+.++|+.++.-..+ .+ . .+......+ ++. -+ ++|++.... +...
T Consensus 237 dG~~~~vs~~------g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 237 AGRLVWPTYT------GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TTEEEEEBTT------SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCcEEEEeCC------CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 7888887665 6899999987653222 11 0 000000111 222 23 456655431 1122
Q ss_pred -eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCc-EEEEE-c-CCeEEEEeCCCC
Q 035482 269 -EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGE-ILLEY-K-CRALVSYNPRNE 344 (378)
Q Consensus 269 -~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-vl~~~-~-~~~l~~yd~~t~ 344 (378)
+||+.+- ..+....+|.+. ....-+.+..||+ .++.. . ++.+.+||.+++
T Consensus 311 ~~V~viD~----~t~kv~~~i~vg----------------------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 311 RFVVVLDA----KTGERLAKFEMG----------------------HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp EEEEEEET----TTCCEEEEEEEE----------------------EEECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CEEEEEEC----CCCeEEEEEECC----------------------CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 8999875 456667777651 1123466777886 66654 3 578999999998
Q ss_pred cEEE-EEEeCCCC
Q 035482 345 MFKD-LLLHGTPN 356 (378)
Q Consensus 345 ~~~~-v~~~~~~~ 356 (378)
+..+ +...+.+.
T Consensus 365 k~~~~i~~~~~p~ 377 (386)
T 3sjl_D 365 EELRSVNQLGHGP 377 (386)
T ss_dssp CEEEEECCCCSSC
T ss_pred cEEEEecCCCCCc
Confidence 7544 55555544
No 82
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=64.45 E-value=97 Score=29.27 Aligned_cols=185 Identities=11% Similarity=0.060 Sum_probs=0.0
Q ss_pred CceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEE
Q 035482 100 KGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQI 179 (378)
Q Consensus 100 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~V 179 (378)
+++++... ..+...|+|..|++...|...+. ..+.++|. +.+-+......... ..+.+
T Consensus 122 ~~~~~~s~--~~~~~~l~d~~~g~~~~l~~~~~-------~~~~~spD-G~~la~~~~~~~~~------------~~i~~ 179 (582)
T 3o4h_A 122 EAVVFTGA--TEDRVALYALDGGGLRELARLPG-------FGFVSDIR-GDLIAGLGFFGGGR------------VSLFT 179 (582)
T ss_dssp SCEEEEEE--CSSCEEEEEEETTEEEEEEEESS-------CEEEEEEE-TTEEEEEEEEETTE------------EEEEE
T ss_pred CeEEEEec--CCCCceEEEccCCcEEEeecCCC-------ceEEECCC-CCEEEEEEEcCCCC------------eEEEE
Q ss_pred EEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCc--EEEEEECCCceEeEEcCCCccCcceeEE------
Q 035482 180 LTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSR--LLISFDIADEQFRVVEKPDELHRIHYDL------ 251 (378)
Q Consensus 180 yss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~--~il~fD~~~e~~~~i~lP~~~~~~~~~l------ 251 (378)
++..++.++.+...+... ......-+|+..+.... .. .|..+|+++.+.. .+.........-.
T Consensus 180 ~d~~~g~~~~l~~~~~~~--~~~~~SpDG~~l~~~~~-----~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 180 SNLSSGGLRVFDSGEGSF--SSASISPGMKVTAGLET-----AREARLVTVDPRDGSVE--DLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EETTTCCCEEECCSSCEE--EEEEECTTSCEEEEEEC-----SSCEEEEEECTTTCCEE--ECCCSCSHHHHHCCSEEEE
T ss_pred EcCCCCCceEeecCCCcc--ccceECCCCCEEEEccC-----CCeeEEEEEcCCCCcEE--EccCCCcChhhhhhccccc
Q ss_pred --EEeCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEE
Q 035482 252 --VNLGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILL 329 (378)
Q Consensus 252 --~~~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~ 329 (378)
..-+|++.+.........||.+ +.... .+. ..+.-+.+. +|.+++
T Consensus 251 ~~~spdg~~~~~~~~~g~~~l~~~------g~~~~----~~~----------------------~~v~~~~~s-dg~~l~ 297 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREGRSAVFID------GERVE----APQ----------------------GNHGRVVLW-RGKLVT 297 (582)
T ss_dssp EEECTTSCEEEEEEETTEEEEEET------TEEEC----CCS----------------------SEEEEEEEE-TTEEEE
T ss_pred eeEcCCCcEEEEEEcCCcEEEEEE------CCeec----cCC----------------------CceEEEEec-CCEEEE
Q ss_pred EEcC----CeEEEEeCCCCcEEEE
Q 035482 330 EYKC----RALVSYNPRNEMFKDL 349 (378)
Q Consensus 330 ~~~~----~~l~~yd~~t~~~~~v 349 (378)
.... ..++.+|.++ +.+.+
T Consensus 298 ~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 298 SHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEETTEEEEEEEETTCC-EEECC
T ss_pred EEcCCCCCCeEEEEcCCC-ceEEE
No 83
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=63.20 E-value=69 Score=27.11 Aligned_cols=196 Identities=10% Similarity=0.031 Sum_probs=92.4
Q ss_pred eeeCceEEEeecCCCceEEEEcccccceeeC-CCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCce
Q 035482 97 GSCKGLLCLCDSSTKNRLYVYNPFTRNYVEL-PKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKS 175 (378)
Q Consensus 97 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 175 (378)
-+.+|-+++... ...+.|||..+++.... ..............+.+.+.. .+-++ ... ..
T Consensus 59 ~~~~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~--~~~--------------d~ 119 (337)
T 1gxr_A 59 ISNPTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIV--GGE--------------AS 119 (337)
T ss_dssp ECSSSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS-SEEEE--EES--------------SS
T ss_pred EecCCcEEEEcC--CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC-CEEEE--EcC--------------CC
Confidence 344555544443 57888999887653321 111100112344556677742 22222 111 14
Q ss_pred EEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeE-EcCCCccCcceeEEE
Q 035482 176 EVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRV-VEKPDELHRIHYDLV 252 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~l~ 252 (378)
.+.+|+..++............ ..-..+.+ +|.....+.. .+.|..+|+.+.+... +.... ....-+
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~-----dg~v~~~d~~~~~~~~~~~~~~----~~i~~~ 189 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSA-PACYALAISPDSKVCFSCCS-----DGNIAVWDLHNQTLVRQFQGHT----DGASCI 189 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSS-SCEEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEEEEECCCS----SCEEEE
T ss_pred cEEEEECCCCCcceeeecccCC-CceEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCceeeeeeccc----CceEEE
Confidence 6889999888654332111000 00011111 4544444433 4689999998765433 32211 112222
Q ss_pred Ee--CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEE
Q 035482 253 NL--GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLE 330 (378)
Q Consensus 253 ~~--~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~ 330 (378)
.+ +|.+.++...+....+|.++.. .....+... ..+.-+.+..+|+.++.
T Consensus 190 ~~~~~~~~l~~~~~dg~i~~~d~~~~------~~~~~~~~~----------------------~~v~~~~~s~~~~~l~~ 241 (337)
T 1gxr_A 190 DISNDGTKLWTGGLDNTVRSWDLREG------RQLQQHDFT----------------------SQIFSLGYCPTGEWLAV 241 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTT------EEEEEEECS----------------------SCEEEEEECTTSSEEEE
T ss_pred EECCCCCEEEEEecCCcEEEEECCCC------ceEeeecCC----------------------CceEEEEECCCCCEEEE
Confidence 22 5655555443222277765431 122222210 12334555567776665
Q ss_pred E-cCCeEEEEeCCCCcEEEE
Q 035482 331 Y-KCRALVSYNPRNEMFKDL 349 (378)
Q Consensus 331 ~-~~~~l~~yd~~t~~~~~v 349 (378)
. .++.+..||+++++...+
T Consensus 242 ~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 242 GMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp EETTSCEEEEETTSSCEEEE
T ss_pred EcCCCcEEEEECCCCCeEEE
Confidence 4 357788889888775543
No 84
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=62.11 E-value=1.1e+02 Score=29.27 Aligned_cols=76 Identities=12% Similarity=0.160 Sum_probs=41.6
Q ss_pred CCCcEEECCeEEEEeccCCCCCCcEEEEEECCC--ceEeEE-cCCCccC----cceeEEEEeCCeEEEEEeCCCCceEEE
Q 035482 200 APSQVLVNGRLHWCTWPRYRGPSRLLISFDIAD--EQFRVV-EKPDELH----RIHYDLVNLGGCLSAAVPCSSGKEIWV 272 (378)
Q Consensus 200 ~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~--e~~~~i-~lP~~~~----~~~~~l~~~~G~L~~v~~~~~~~~iW~ 272 (378)
...+++.+|.+|..... ..|.++|.+| +.|+.- ..|.... ....-+...+|++++.... ..|..
T Consensus 61 ~~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d---g~l~A 131 (582)
T 1flg_A 61 ESQAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD---ASVVA 131 (582)
T ss_dssp CCCCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT---TEEEE
T ss_pred eeccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC---CEEEE
Confidence 35678999999998764 3599999865 567653 2222110 0011223456666554321 25556
Q ss_pred EeeCCCCCceee
Q 035482 273 MKEYDVKESWIK 284 (378)
Q Consensus 273 l~~~~~~~~W~~ 284 (378)
++-...+..|..
T Consensus 132 lD~~TG~~~W~~ 143 (582)
T 1flg_A 132 LNKNTGKVVWKK 143 (582)
T ss_dssp EESSSCCEEEEE
T ss_pred EECCCCCEEeee
Confidence 653222556654
No 85
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=60.83 E-value=72 Score=26.54 Aligned_cols=196 Identities=8% Similarity=0.027 Sum_probs=100.3
Q ss_pred EEeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 95 VVGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
+....+|-|.+... ....+.++||. ++...++.+.. .....++..|+.. . +.... .. .
T Consensus 25 i~~d~~g~l~v~~~-~~~~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~g-~--l~v~~---~~-----------~ 82 (300)
T 2qc5_A 25 ITSSEDGKVWFTQH-KANKISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSLG-D--IWFTE---NG-----------A 82 (300)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTS-C--EEEEE---TT-----------T
T ss_pred eeECCCCCEEEEcC-CCCeEEEECCC-CceEEEECCCC---CCcceeEEECCCC-C--EEEEe---cC-----------C
Confidence 34455677766653 34678999998 77665432211 1234456667543 2 22211 10 1
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV 252 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~ 252 (378)
..+.+|+.. +..+........ ....++.+ +|.+|+.... ...|..+|.+ .++..+.+|.... ....+.
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~~~~-~~~~i~ 152 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQPD--SGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYDLPNKGS-YPAFIT 152 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTT--CCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTC-CEEEEE
T ss_pred CeEEEECCC-CCeEEecCCCCC--CCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEccCCCCCC-CceeEE
Confidence 356677776 666543211000 11122333 5887766543 4689999998 6666666664211 122333
Q ss_pred E-eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE
Q 035482 253 N-LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY 331 (378)
Q Consensus 253 ~-~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~ 331 (378)
. -+|+|++... ....|+..+.. ..... +.. +.. .....-+++..+|.+++..
T Consensus 153 ~d~~g~l~v~~~--~~~~i~~~~~~---g~~~~---~~~--~~~-----------------~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 153 LGSDNALWFTEN--QNNSIGRITNT---GKLEE---YPL--PTN-----------------AAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp ECTTSSEEEEET--TTTEEEEECTT---CCEEE---EEC--SST-----------------TCCEEEEEECTTSSEEEEE
T ss_pred ECCCCCEEEEec--CCCeEEEECCC---CcEEE---eeC--CCC-----------------CCCcceEEECCCCCEEEEc
Confidence 3 3577665543 12256666542 22221 211 100 0122334555678887776
Q ss_pred c-CCeEEEEeCCCCcEEEEE
Q 035482 332 K-CRALVSYNPRNEMFKDLL 350 (378)
Q Consensus 332 ~-~~~l~~yd~~t~~~~~v~ 350 (378)
. .+.+..||+ ++++..+.
T Consensus 206 ~~~~~i~~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 206 IMGNKIGRITT-TGEISEYD 224 (300)
T ss_dssp TTTTEEEEECT-TCCEEEEE
T ss_pred cCCCEEEEEcC-CCcEEEEE
Confidence 4 457999998 66666654
No 86
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=60.38 E-value=46 Score=32.94 Aligned_cols=56 Identities=5% Similarity=0.116 Sum_probs=32.1
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQF 235 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~ 235 (378)
..+++++.....-+.+.............++..+.+||.... ...|.++|..+.+.
T Consensus 562 ~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~-----~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 562 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII-----NEAIFSANRLTGSD 617 (699)
T ss_dssp TEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECST-----TTCEEEEETTTEEE
T ss_pred CeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCC-----CCeEEEEEccCCCc
Confidence 467777776443333322111111122334567899999865 57899999866544
No 87
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=59.32 E-value=83 Score=26.76 Aligned_cols=190 Identities=9% Similarity=0.002 Sum_probs=95.1
Q ss_pred CceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEE
Q 035482 100 KGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQI 179 (378)
Q Consensus 100 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~V 179 (378)
.+.+++... ....+.++|+.|++....-... .... ++.+++..+ + ++.... . ...+.+
T Consensus 9 ~~~~~v~~~-~~~~v~~~d~~~~~~~~~~~~~----~~~~-~~~~s~dg~-~-l~~~~~---~-----------~~~i~~ 66 (331)
T 3u4y_A 9 SNFGIVVEQ-HLRRISFFSTDTLEILNQITLG----YDFV-DTAITSDCS-N-VVVTSD---F-----------CQTLVQ 66 (331)
T ss_dssp CCEEEEEEG-GGTEEEEEETTTCCEEEEEECC----CCEE-EEEECSSSC-E-EEEEES---T-----------TCEEEE
T ss_pred CCEEEEEec-CCCeEEEEeCcccceeeeEEcc----CCcc-eEEEcCCCC-E-EEEEeC---C-----------CCeEEE
Confidence 444544443 3468999999999875532211 1223 677777643 2 322211 1 146888
Q ss_pred EEcCCCCe--EEeCcccceeecCCCcEEE--CCe-EEEEeccCCCCCCcEEEEEECCCceEeE-EcCCCccCcceeEEEE
Q 035482 180 LTLGSQEW--RSLGQVNYHMLEAPSQVLV--NGR-LHWCTWPRYRGPSRLLISFDIADEQFRV-VEKPDELHRIHYDLVN 253 (378)
Q Consensus 180 yss~~~~W--~~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~l~~ 253 (378)
++..++.- +..... . ....++.+ +|. +| .... ......|..+|+.+.+... ++... ....+..
T Consensus 67 ~d~~~~~~~~~~~~~~-~---~~~~~~~~s~dg~~l~-~~~~--~~~~~~i~v~d~~~~~~~~~~~~~~----~~~~~~~ 135 (331)
T 3u4y_A 67 IETQLEPPKVVAIQEG-Q---SSMADVDITPDDQFAV-TVTG--LNHPFNMQSYSFLKNKFISTIPIPY----DAVGIAI 135 (331)
T ss_dssp EECSSSSCEEEEEEEC-S---SCCCCEEECTTSSEEE-ECCC--SSSSCEEEEEETTTTEEEEEEECCT----TEEEEEE
T ss_pred EECCCCceeEEecccC-C---CCccceEECCCCCEEE-EecC--CCCcccEEEEECCCCCeEEEEECCC----CccceEE
Confidence 99888764 211110 0 11111222 454 44 3332 1111289999998766533 33322 1122322
Q ss_pred -eCCe-EEEEEeCCCC-ceEEEEeeCCCCCceee-EEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEE
Q 035482 254 -LGGC-LSAAVPCSSG-KEIWVMKEYDVKESWIK-EYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILL 329 (378)
Q Consensus 254 -~~G~-L~~v~~~~~~-~~iW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~ 329 (378)
-+|+ |++....... ..+|.++..+ ..... ...+.. + ....-+.+..+|+.++
T Consensus 136 spdg~~l~~~~~~~~~~i~~~~~~~~g--~~~~~~~~~~~~----~------------------~~~~~~~~spdg~~l~ 191 (331)
T 3u4y_A 136 SPNGNGLILIDRSSANTVRRFKIDADG--VLFDTGQEFISG----G------------------TRPFNITFTPDGNFAF 191 (331)
T ss_dssp CTTSSCEEEEEETTTTEEEEEEECTTC--CEEEEEEEEECS----S------------------SSEEEEEECTTSSEEE
T ss_pred CCCCCEEEEEecCCCceEEEEEECCCC--cEeecCCccccC----C------------------CCccceEECCCCCEEE
Confidence 2665 5555444344 3677776432 11111 111110 0 1234456677887555
Q ss_pred EEc--CCeEEEEeCCCCcE
Q 035482 330 EYK--CRALVSYNPRNEMF 346 (378)
Q Consensus 330 ~~~--~~~l~~yd~~t~~~ 346 (378)
+.. ++.+..||+++++.
T Consensus 192 v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 192 VANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEETTTTEEEEEECSSTTS
T ss_pred EEeCCCCeEEEEECCCCcc
Confidence 433 57799999998885
No 88
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=58.62 E-value=85 Score=26.67 Aligned_cols=34 Identities=12% Similarity=0.008 Sum_probs=19.5
Q ss_pred eEEEEEeeCCcEEEEEcCCeEEEEeCCCCcEEEE
Q 035482 316 VRVLCLLKNGEILLEYKCRALVSYNPRNEMFKDL 349 (378)
Q Consensus 316 ~~~~~~~~~g~vl~~~~~~~l~~yd~~t~~~~~v 349 (378)
...+.+..+|.+++...++.++.||++.+.....
T Consensus 257 ~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 257 ESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNF 290 (330)
T ss_dssp CSCCEECTTSCEEEECTTCEEEEECTTSCEEEEE
T ss_pred cccceEcCCCeEEEecCCCCEEEECCCCcEEEEE
Confidence 3344444466676666666788888643333333
No 89
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=58.60 E-value=75 Score=26.07 Aligned_cols=138 Identities=12% Similarity=0.051 Sum_probs=69.1
Q ss_pred CCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCC-CCeE
Q 035482 110 TKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGS-QEWR 188 (378)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~-~~W~ 188 (378)
....++++|+.+++...+.... ....++.+.|.. .+-++. . . ..+.+++..+ +...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg-~~l~~~----~-~------------~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDG-KYLLLN----S-E------------GLLYRLSLAGDPSPE 76 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTS-SEEEEE----E-T------------TEEEEEESSSCCSCE
T ss_pred cceeEEEEeCCCCceeeeccCC-----cceEeeEECCCC-CEEEEE----c-C------------CeEEEEeCCCCCCce
Confidence 4468999999999887664422 122345566653 332221 1 1 4688899988 7666
Q ss_pred EeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE-EeCCeEEEEEeCCCC
Q 035482 189 SLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV-NLGGCLSAAVPCSSG 267 (378)
Q Consensus 189 ~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~G~L~~v~~~~~~ 267 (378)
.+...............-+|........ .......|..+|+.+.....+..... ...+. .-+|+..++......
T Consensus 77 ~~~~~~~~~~~~~~~~spdg~~l~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 77 KVDTGFATICNNDHGISPDGALYAISDK-VEFGKSAIYLLPSTGGTPRLMTKNLP----SYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp ECCCTTCCCBCSCCEECTTSSEEEEEEC-TTTSSCEEEEEETTCCCCEECCSSSS----EEEEEECTTSSEEEEEEEETT
T ss_pred EeccccccccccceEECCCCCEEEEEEe-CCCCcceEEEEECCCCceEEeecCCC----ccceEECCCCCEEEEEECCCC
Confidence 5432211000011111224543333331 01134688888987766544432221 11222 225665543333333
Q ss_pred c-eEEEEee
Q 035482 268 K-EIWVMKE 275 (378)
Q Consensus 268 ~-~iW~l~~ 275 (378)
. .||.++.
T Consensus 152 ~~~l~~~~~ 160 (297)
T 2ojh_A 152 VFDIYSMDI 160 (297)
T ss_dssp EEEEEEEET
T ss_pred ceEEEEEEC
Confidence 3 8888864
No 90
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=57.88 E-value=1.5e+02 Score=29.21 Aligned_cols=143 Identities=13% Similarity=0.108 Sum_probs=75.7
Q ss_pred eEEEEEEcCCC--C-eEEeCcccceeecCCCcE-EECCeEEEEeccCCCCCCcEEEEEECCC--ceEeEEcCCCccCcce
Q 035482 175 SEVQILTLGSQ--E-WRSLGQVNYHMLEAPSQV-LVNGRLHWCTWPRYRGPSRLLISFDIAD--EQFRVVEKPDELHRIH 248 (378)
Q Consensus 175 ~~~~Vyss~~~--~-W~~~~~~p~~~~~~~~~v-~~~G~lyw~~~~~~~~~~~~il~fD~~~--e~~~~i~lP~~~~~~~ 248 (378)
..+.+++..++ . |+.+........ ..+ .-++.+|+.... ......|...|+++ ..|..+- |.... ..
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~~---~~~~~dg~~l~~~s~~--~~~~~~l~~~d~~~~~~~~~~l~-~~~~~-~l 366 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQW---DFVDGVGDQLWFVSGD--GAPLKKIVRVDLSGSTPRFDTVV-PESKD-NL 366 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSCE---EEEEEETTEEEEEECT--TCTTCEEEEEECSSSSCEEEEEE-CCCSS-EE
T ss_pred ceEEEEECCCCCCcccEEecCCCCceE---EEEeccCCEEEEEECC--CCCCCEEEEEeCCCCccccEEEe-cCCCC-eE
Confidence 57788888877 6 887643211110 112 245667777643 22346899999988 5787653 32111 11
Q ss_pred eEEEEeCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCc-E
Q 035482 249 YDLVNLGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGE-I 327 (378)
Q Consensus 249 ~~l~~~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-v 327 (378)
..+...++.|.+....+....||+++..+ . ....+.. +.. ..+..+....+++ +
T Consensus 367 ~~~~~~~~~lv~~~~~dg~~~l~~~~~~g-~----~~~~l~~--~~~------------------~~v~~~~~s~d~~~l 421 (741)
T 1yr2_A 367 ESVGIAGNRLFASYIHDAKSQVLAFDLDG-K----PAGAVSL--PGI------------------GSASGLSGRPGDRHA 421 (741)
T ss_dssp EEEEEEBTEEEEEEEETTEEEEEEEETTS-C----EEEECBC--SSS------------------CEEEEEECCBTCSCE
T ss_pred EEEEEECCEEEEEEEECCEEEEEEEeCCC-C----ceeeccC--CCC------------------eEEEEeecCCCCCEE
Confidence 12333467766655433333899987433 1 2333332 110 1122233334554 5
Q ss_pred EEEEc----CCeEEEEeCCCCcEEEE
Q 035482 328 LLEYK----CRALVSYNPRNEMFKDL 349 (378)
Q Consensus 328 l~~~~----~~~l~~yd~~t~~~~~v 349 (378)
++... ...++.||+++++.+.+
T Consensus 422 ~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 422 YLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 55433 35799999998876544
No 91
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=57.86 E-value=84 Score=26.40 Aligned_cols=112 Identities=12% Similarity=0.087 Sum_probs=65.1
Q ss_pred EECCeEEEEeccCCCCCCcEEEEEECCCceE-eEEcCCCccCcceeEEEEeCCeEEEEEeCCCCceEEEEeeCCCCCcee
Q 035482 205 LVNGRLHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPDELHRIHYDLVNLGGCLSAAVPCSSGKEIWVMKEYDVKESWI 283 (378)
Q Consensus 205 ~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~ 283 (378)
+.+|.||--... .....|..+|+++.+- ..+++|... ...-+...+++|+++... ...+|+.+. ..-.
T Consensus 28 ~~~~~LyestG~---~g~S~v~~vD~~tgkv~~~~~l~~~~--fgeGi~~~~~~ly~ltw~--~~~v~v~D~----~tl~ 96 (243)
T 3mbr_X 28 YLRGHLYESTGE---TGRSSVRKVDLETGRILQRAEVPPPY--FGAGIVAWRDRLIQLTWR--NHEGFVYDL----ATLT 96 (243)
T ss_dssp EETTEEEEEECC---TTSCEEEEEETTTCCEEEEEECCTTC--CEEEEEEETTEEEEEESS--SSEEEEEET----TTTE
T ss_pred EECCEEEEECCC---CCCceEEEEECCCCCEEEEEeCCCCc--ceeEEEEeCCEEEEEEee--CCEEEEEEC----CcCc
Confidence 445777766554 1245899999988655 557887622 112345557888887532 226777653 2345
Q ss_pred eEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCC-cEEEEEcCCeEEEEeCCCCcE-EEEEE
Q 035482 284 KEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNG-EILLEYKCRALVSYNPRNEMF-KDLLL 351 (378)
Q Consensus 284 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~vl~~~~~~~l~~yd~~t~~~-~~v~~ 351 (378)
+..+|... .++ .++..+| .+++..+..++..+|++|.+. ++|..
T Consensus 97 ~~~ti~~~-~~G-----------------------wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 97 PRARFRYP-GEG-----------------------WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEEEECS-SCC-----------------------CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEeCC-CCc-----------------------eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 55666542 111 1222344 455555567899999999765 34443
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=57.42 E-value=92 Score=26.68 Aligned_cols=34 Identities=0% Similarity=-0.128 Sum_probs=23.6
Q ss_pred eEEEEEeeCCcEEEEE-cCCeEEEEeCCCCcEEEE
Q 035482 316 VRVLCLLKNGEILLEY-KCRALVSYNPRNEMFKDL 349 (378)
Q Consensus 316 ~~~~~~~~~g~vl~~~-~~~~l~~yd~~t~~~~~v 349 (378)
+.-+.+..+|..++.. .++.+..||+++++....
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 4445666677776654 467899999998876554
No 93
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=57.18 E-value=80 Score=25.90 Aligned_cols=192 Identities=14% Similarity=0.134 Sum_probs=96.0
Q ss_pred EEeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 95 VVGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
+.-..+|-|.+... ...++++||.++....++.... ....++.+|+.. . +..... . .
T Consensus 72 i~~~~~g~l~v~~~--~~~i~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g-~--l~v~~~-~-------------~ 128 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF--NNRVVTLAAGSNNQTVLPFDGL----NYPEGLAVDTQG-A--VYVADR-G-------------N 128 (270)
T ss_dssp EEECTTCCEEEEET--TTEEEEECTTCSCCEECCCCSC----SSEEEEEECTTC-C--EEEEEG-G-------------G
T ss_pred eEECCCCCEEEEcC--CCEEEEEeCCCceEeeeecCCc----CCCcceEECCCC-C--EEEEEC-C-------------C
Confidence 33344677766653 5689999999887766654221 234567777743 2 332211 0 1
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV 252 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~ 252 (378)
..+.+|+.++.......... .....++.+ +|.+|+.... ...|..||..+.......... . .....+.
T Consensus 129 ~~i~~~~~~~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~-~-~~p~~i~ 198 (270)
T 1rwi_B 129 NRVVKLAAGSKTQTVLPFTG---LNDPDGVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVVLPFTD-I-TAPWGIA 198 (270)
T ss_dssp TEEEEECTTCCSCEECCCCS---CCSCCCEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEECCCSS-C-CSEEEEE
T ss_pred CEEEEEECCCceeEeecccc---CCCceeEEEeCCCCEEEEECC-----CCEEEEEecCCCceEeecccC-C-CCceEEE
Confidence 34666655554433221100 112233444 5888776654 468999999887654432211 1 1112232
Q ss_pred Ee-CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE
Q 035482 253 NL-GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY 331 (378)
Q Consensus 253 ~~-~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~ 331 (378)
.- +|.|++.... ...|++++..+ ..... +.. .+ .....-+++..+|++++..
T Consensus 199 ~d~~g~l~v~~~~--~~~v~~~~~~~-~~~~~----~~~---~~-----------------~~~p~~i~~~~~g~l~v~~ 251 (270)
T 1rwi_B 199 VDEAGTVYVTEHN--TNQVVKLLAGS-TTSTV----LPF---TG-----------------LNTPLAVAVDSDRTVYVAD 251 (270)
T ss_dssp ECTTCCEEEEETT--TSCEEEECTTC-SCCEE----CCC---CS-----------------CSCEEEEEECTTCCEEEEE
T ss_pred ECCCCCEEEEECC--CCcEEEEcCCC-Cccee----ecc---CC-----------------CCCceeEEECCCCCEEEEE
Confidence 22 4556555432 11344443322 11110 100 00 0123345566678877665
Q ss_pred c-CCeEEEEeCCCCcE
Q 035482 332 K-CRALVSYNPRNEMF 346 (378)
Q Consensus 332 ~-~~~l~~yd~~t~~~ 346 (378)
. ++++..|++..++.
T Consensus 252 ~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 252 RGNDRVVKLTSLEHHH 267 (270)
T ss_dssp GGGTEEEEECCCGGGS
T ss_pred CCCCEEEEEcCCCccc
Confidence 4 57789998887654
No 94
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=57.08 E-value=95 Score=26.76 Aligned_cols=33 Identities=3% Similarity=-0.026 Sum_probs=21.1
Q ss_pred eEEEEEeeCCcEEEEEcCCeEEEEeCCC--CcEEE
Q 035482 316 VRVLCLLKNGEILLEYKCRALVSYNPRN--EMFKD 348 (378)
Q Consensus 316 ~~~~~~~~~g~vl~~~~~~~l~~yd~~t--~~~~~ 348 (378)
+.-+.+..+|.++....++.+..||+++ ++|..
T Consensus 247 v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~ 281 (372)
T 1k8k_C 247 LLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSF 281 (372)
T ss_dssp EEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEE
T ss_pred eEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEE
Confidence 3445556677766666666777777777 65544
No 95
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=56.23 E-value=94 Score=26.46 Aligned_cols=112 Identities=12% Similarity=0.015 Sum_probs=63.2
Q ss_pred EECCeEEEEeccCCCCCCcEEEEEECCCceE-eEEcCCCccCcceeEEEEeCCeEEEEEeCCCCceEEEEeeCCCCCcee
Q 035482 205 LVNGRLHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPDELHRIHYDLVNLGGCLSAAVPCSSGKEIWVMKEYDVKESWI 283 (378)
Q Consensus 205 ~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~ 283 (378)
+.+|.||--+..+ ....|..+|+++.+- ..+++|... ...-+...+++|+++... ...+|+.+. ..-.
T Consensus 50 ~~~~~LyestG~~---g~S~v~~vD~~Tgkv~~~~~l~~~~--FgeGit~~g~~ly~ltw~--~~~v~v~D~----~t~~ 118 (262)
T 3nol_A 50 YRNGYFYESTGLN---GRSSIRKVDIESGKTLQQIELGKRY--FGEGISDWKDKIVGLTWK--NGLGFVWNI----RNLR 118 (262)
T ss_dssp EETTEEEEEEEET---TEEEEEEECTTTCCEEEEEECCTTC--CEEEEEEETTEEEEEESS--SSEEEEEET----TTCC
T ss_pred EECCEEEEECCCC---CCceEEEEECCCCcEEEEEecCCcc--ceeEEEEeCCEEEEEEee--CCEEEEEEC----ccCc
Confidence 4477777766541 235899999998654 557777521 112245567788777542 226777653 2334
Q ss_pred eEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE-cCCeEEEEeCCCCcEE-EEEE
Q 035482 284 KEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY-KCRALVSYNPRNEMFK-DLLL 351 (378)
Q Consensus 284 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~-~~~~l~~yd~~t~~~~-~v~~ 351 (378)
+..+|... .++ | ++..+|+.++.. +...+..+|++|.+.. .|..
T Consensus 119 ~~~ti~~~-~eG-----------~------------glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 119 QVRSFNYD-GEG-----------W------------GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEEEECS-SCC-----------C------------CEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEEEEECC-CCc-----------e------------EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 45566542 111 1 222355555444 3567888999986543 3443
No 96
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=55.27 E-value=93 Score=26.11 Aligned_cols=197 Identities=12% Similarity=0.111 Sum_probs=98.7
Q ss_pred EEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEc
Q 035482 103 LCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTL 182 (378)
Q Consensus 103 l~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss 182 (378)
|++.+. ....++++||.++ ...+.... ....++.+++... ++... .. ...+.+|+.
T Consensus 42 l~~~~~-~~~~i~~~~~~~~-~~~~~~~~-----~~~~~l~~~~dg~---l~v~~---~~-----------~~~i~~~d~ 97 (296)
T 3e5z_A 42 VIFSDV-RQNRTWAWSDDGQ-LSPEMHPS-----HHQNGHCLNKQGH---LIACS---HG-----------LRRLERQRE 97 (296)
T ss_dssp EEEEEG-GGTEEEEEETTSC-EEEEESSC-----SSEEEEEECTTCC---EEEEE---TT-----------TTEEEEECS
T ss_pred EEEEeC-CCCEEEEEECCCC-eEEEECCC-----CCcceeeECCCCc---EEEEe---cC-----------CCeEEEEcC
Confidence 444432 3468999999998 55543321 2345677777532 32221 01 146788888
Q ss_pred CCCCeEEeCccc-ceeecCCCcEEE--CCeEEEEeccC------------CCCCCcEEEEEECCCceEeEEcCCCccCcc
Q 035482 183 GSQEWRSLGQVN-YHMLEAPSQVLV--NGRLHWCTWPR------------YRGPSRLLISFDIADEQFRVVEKPDELHRI 247 (378)
Q Consensus 183 ~~~~W~~~~~~p-~~~~~~~~~v~~--~G~lyw~~~~~------------~~~~~~~il~fD~~~e~~~~i~lP~~~~~~ 247 (378)
.++..+...... .........+.+ +|.+|.....+ .......|..+|.. .++..+.-.. . .
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~-~ 173 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR--V-K 173 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC--S-S
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC--C-C
Confidence 888776543211 111111223333 68877642210 01123589999987 4554442111 1 1
Q ss_pred eeEEE-EeCCeEEEEEeCCCCceEEEEeeCCCCCce-eeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCC
Q 035482 248 HYDLV-NLGGCLSAAVPCSSGKEIWVMKEYDVKESW-IKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNG 325 (378)
Q Consensus 248 ~~~l~-~~~G~L~~v~~~~~~~~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 325 (378)
...+. .-+|++. +...... .||+.+-.+ .+.. .....+.. ..+ ...-+++..+|
T Consensus 174 ~~gi~~s~dg~~l-v~~~~~~-~i~~~~~~~-~g~~~~~~~~~~~--~~~-------------------~p~~i~~d~~G 229 (296)
T 3e5z_A 174 PNGLAFLPSGNLL-VSDTGDN-ATHRYCLNA-RGETEYQGVHFTV--EPG-------------------KTDGLRVDAGG 229 (296)
T ss_dssp EEEEEECTTSCEE-EEETTTT-EEEEEEECS-SSCEEEEEEEECC--SSS-------------------CCCSEEEBTTS
T ss_pred CccEEECCCCCEE-EEeCCCC-eEEEEEECC-CCcCcCCCeEeeC--CCC-------------------CCCeEEECCCC
Confidence 11222 2367766 4433222 455544321 2334 22333311 100 01124556788
Q ss_pred cEEEEEcCCeEEEEeCCCCcEEEEEEe
Q 035482 326 EILLEYKCRALVSYNPRNEMFKDLLLH 352 (378)
Q Consensus 326 ~vl~~~~~~~l~~yd~~t~~~~~v~~~ 352 (378)
.+++.. .+++..||++.+.++.+...
T Consensus 230 ~l~v~~-~~~v~~~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 230 LIWASA-GDGVHVLTPDGDELGRVLTP 255 (296)
T ss_dssp CEEEEE-TTEEEEECTTSCEEEEEECS
T ss_pred CEEEEc-CCeEEEECCCCCEEEEEECC
Confidence 888877 68899999997777766543
No 97
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=54.79 E-value=1.6e+02 Score=28.57 Aligned_cols=148 Identities=11% Similarity=0.036 Sum_probs=78.1
Q ss_pred eeeCceEEEeecCCCceEEEEcccccce--eeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 97 GSCKGLLCLCDSSTKNRLYVYNPFTRNY--VELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 97 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
...+|.|++.+. ...++..+++..... ..+.... ....|+++|...+. ++... .. .
T Consensus 48 ~~~~~~ly~sD~-~~~~I~r~~~~g~~~~~~v~~~~~-----~~P~GlAvD~~~~~--ly~~d---~~-----------~ 105 (619)
T 3s94_A 48 VFSHGLIYWSDV-SEEAIKRTEFNKTESVQNVVVSGL-----LSPDGLACDWLGEK--LYWTD---SE-----------T 105 (619)
T ss_dssp ETTTTEEEEEET-TTTEEEEEEC-----CEEEECSSC-----SCEEEEEEETTTTE--EEEEE---TT-----------T
T ss_pred EeCCCEEEEEEC-CCCeEEEEEccCCCceEEEEeCCC-----CCcCeEEEEecCCE--EEEEe---CC-----------C
Confidence 456888988875 456788888876532 2223211 34567888886543 33321 11 1
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDL 251 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l 251 (378)
..+++++.....=+.+.. . ......++.+ +|.|||.... ....|..++++...-..+--.. .. ...-|
T Consensus 106 ~~I~v~~~dG~~~~~l~~--~-~l~~P~~Iavdp~~g~ly~tD~g----~~~~I~r~~~dG~~~~~l~~~~-~~-~P~Gl 176 (619)
T 3s94_A 106 NRIEVSNLDGSLRKVLFW--Q-ELDQPRAIALDPSSGFMYWTDWG----EVPKIERAGMDGSSRFIIINSE-IY-WPNGL 176 (619)
T ss_dssp TEEEEEETTSCSCEEEEC--S-SCSCCCCEEEETTTTEEEEEECS----SSCEEEEEETTSCSCEEEECSS-CS-SEEEE
T ss_pred CEEEEEECCCCCEEEEEe--C-CCCCCceEEEecCCCeEEEeccC----CCCEEEEEECCCCceEEEEeCC-CC-CCcEE
Confidence 567888876543222211 0 1123445555 5899999754 2368999999765444331111 00 11112
Q ss_pred EE--eCCeEEEEEeCCCCceEEEEeeCC
Q 035482 252 VN--LGGCLSAAVPCSSGKEIWVMKEYD 277 (378)
Q Consensus 252 ~~--~~G~L~~v~~~~~~~~iW~l~~~~ 277 (378)
+. .+++|+.+... ...||...-.|
T Consensus 177 ald~~~~~LY~aD~~--~~~I~~~~~dG 202 (619)
T 3s94_A 177 TLDYEEQKLYWADAK--LNFIHKSNLDG 202 (619)
T ss_dssp EEETTTTEEEEEETT--TCCEEEESSSC
T ss_pred EEEccCCEEEEEeCC--CCeEEEecCCC
Confidence 22 25778777432 23788887654
No 98
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=54.34 E-value=89 Score=25.60 Aligned_cols=202 Identities=13% Similarity=0.032 Sum_probs=96.3
Q ss_pred EeeeCceEEEeecCCCceEEEEcccc-cceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 96 VGSCKGLLCLCDSSTKNRLYVYNPFT-RNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 96 ~~s~~GLl~~~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
.-+.+|-.++... ...++++|..+ ++...+...... .....+.+.+.. .+ ++... .. .+ ..
T Consensus 48 ~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~spdg-~~-l~~~~-~~-~~---------~~ 109 (297)
T 2ojh_A 48 NWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFAT---ICNNDHGISPDG-AL-YAISD-KV-EF---------GK 109 (297)
T ss_dssp EECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCC---CBCSCCEECTTS-SE-EEEEE-CT-TT---------SS
T ss_pred EECCCCCEEEEEc--CCeEEEEeCCCCCCceEecccccc---ccccceEECCCC-CE-EEEEE-eC-CC---------Cc
Confidence 3344555433332 46899999999 887776543211 111123455542 22 22221 11 10 12
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEECCe-EEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE-
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGR-LHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV- 252 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~- 252 (378)
..+.+++..++.-+.+........ ....-+|. +++.... .....|..+|+.+.....+.... . ....+.
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~~~~~---~~~spdg~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~--~-~~~~~~~ 180 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRLMTKNLPSYW---HGWSPDGKSFTYCGIR---DQVFDIYSMDIDSGVETRLTHGE--G-RNDGPDY 180 (297)
T ss_dssp CEEEEEETTCCCCEECCSSSSEEE---EEECTTSSEEEEEEEE---TTEEEEEEEETTTCCEEECCCSS--S-CEEEEEE
T ss_pred ceEEEEECCCCceEEeecCCCccc---eEECCCCCEEEEEECC---CCceEEEEEECCCCcceEcccCC--C-ccccceE
Confidence 567777777766554432211100 00111343 4433332 01235667777766554442221 1 111222
Q ss_pred EeCCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE
Q 035482 253 NLGGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY 331 (378)
Q Consensus 253 ~~~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~ 331 (378)
.-+|+..++....... .||.++..+ .. ...+.. . ...+..+.+..+|+.++..
T Consensus 181 s~dg~~l~~~~~~~~~~~i~~~~~~~--~~---~~~~~~--~-------------------~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 181 SPDGRWIYFNSSRTGQMQIWRVRVDG--SS---VERITD--S-------------------AYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTS--SC---EEECCC--C-------------------SEEEEEEEECTTSSEEEEE
T ss_pred CCCCCEEEEEecCCCCccEEEECCCC--CC---cEEEec--C-------------------CcccCCeEECCCCCEEEEE
Confidence 2367655555433334 999987432 11 112211 0 0123345566678766553
Q ss_pred c-C-----------CeEEEEeCCCCcEEEEE
Q 035482 332 K-C-----------RALVSYNPRNEMFKDLL 350 (378)
Q Consensus 332 ~-~-----------~~l~~yd~~t~~~~~v~ 350 (378)
. + ..++.||+++++.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 3 2 45999999999877665
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=53.42 E-value=85 Score=27.15 Aligned_cols=97 Identities=10% Similarity=0.082 Sum_probs=52.9
Q ss_pred CcEEEEEECCCceEeEEc-CCCccCcceeEEEE-eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCcccc
Q 035482 222 SRLLISFDIADEQFRVVE-KPDELHRIHYDLVN-LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQD 299 (378)
Q Consensus 222 ~~~il~fD~~~e~~~~i~-lP~~~~~~~~~l~~-~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 299 (378)
.+.|..+|+.+.+...+. .+... ....+.. -+|.+.+....+....||-++... . . ..++... .
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~--~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~--~--~-~~~~~~~-h------ 213 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDV--EYSSGVLHKDSLLLALYSPDGILDVYNLSSPD--Q--A-SSRFPVD-E------ 213 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSC--CCCEEEECTTSCEEEEECTTSCEEEEESSCTT--S--C-CEECCCC-T------
T ss_pred CCcEEEEECCCCcEEEEEecCCCC--ceEEEEECCCCCEEEEEcCCCEEEEEECCCCC--C--C-ccEEecc-C------
Confidence 478999999887664332 22211 1112222 256666554433333889876421 1 0 0111110 0
Q ss_pred ccCccccccccccCceeEEEEEeeCCcEEEEEcCCeEEEEeCCCCc
Q 035482 300 LSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYKCRALVSYNPRNEM 345 (378)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~~~~l~~yd~~t~~ 345 (378)
...+.-+.+..+|..++...++.+..||+++.+
T Consensus 214 -------------~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 214 -------------EAKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp -------------TSCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred -------------CCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 023455666778888877766788999988875
No 100
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=52.88 E-value=1.1e+02 Score=26.00 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=24.7
Q ss_pred CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCC
Q 035482 207 NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPD 242 (378)
Q Consensus 207 ~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~ 242 (378)
+|.+||.... ...|..+|+.+.....+..|.
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~~ 54 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTMDA 54 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEECSS
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeCCC
Confidence 4899998765 579999999988777776653
No 101
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=51.25 E-value=1.1e+02 Score=25.79 Aligned_cols=96 Identities=7% Similarity=0.019 Sum_probs=48.5
Q ss_pred eEEEEEEcCCC--CeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE
Q 035482 175 SEVQILTLGSQ--EWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV 252 (378)
Q Consensus 175 ~~~~Vyss~~~--~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~ 252 (378)
..+.+++..+| .|+....-... .....+.-+|.++. +.. ..|.+||.+.+.-..+..|... ......
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~--~~~~~~~pdG~ilv-s~~------~~V~~~d~~G~~~W~~~~~~~~--~~~~~~ 83 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWE--CNSVAATKAGEILF-SYS------KGAKMITRDGRELWNIAAPAGC--EMQTAR 83 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCC--CCEEEECTTSCEEE-ECB------SEEEEECTTSCEEEEEECCTTC--EEEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCccCC--CcCeEECCCCCEEE-eCC------CCEEEECCCCCEEEEEcCCCCc--cccccE
Confidence 56788898788 68864421000 00112233787766 333 5799999955444445555211 111222
Q ss_pred E-eCCeEEEEEeCCCCceEEEEeeCCCCCcee
Q 035482 253 N-LGGCLSAAVPCSSGKEIWVMKEYDVKESWI 283 (378)
Q Consensus 253 ~-~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~ 283 (378)
. -+|++.++.... ...|+.++..| +..|.
T Consensus 84 ~~~dG~~lv~~~~~-~~~v~~vd~~G-k~l~~ 113 (276)
T 3no2_A 84 ILPDGNALVAWCGH-PSTILEVNMKG-EVLSK 113 (276)
T ss_dssp ECTTSCEEEEEEST-TEEEEEECTTS-CEEEE
T ss_pred ECCCCCEEEEecCC-CCEEEEEeCCC-CEEEE
Confidence 2 366666654421 23666665433 33443
No 102
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=51.07 E-value=1.2e+02 Score=25.99 Aligned_cols=109 Identities=12% Similarity=0.006 Sum_probs=62.0
Q ss_pred EECCeEEEEeccCCCCCCcEEEEEECCCceE-eEEcCCCccCcceeEEEEeCCeEEEEEeCCCCceEEEEeeCCCCCcee
Q 035482 205 LVNGRLHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPDELHRIHYDLVNLGGCLSAAVPCSSGKEIWVMKEYDVKESWI 283 (378)
Q Consensus 205 ~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~ 283 (378)
+.+|.||--... .+.|..+|+++.+- ..+ +|... ...-+...+++|+++... ...+|+.+. ..-.
T Consensus 62 ~~~~~Ly~stG~-----~g~v~~iD~~Tgkv~~~~-l~~~~--FgeGit~~g~~Ly~ltw~--~~~v~V~D~----~Tl~ 127 (268)
T 3nok_A 62 FHQGHFFESTGH-----QGTLRQLSLESAQPVWME-RLGNI--FAEGLASDGERLYQLTWT--EGLLFTWSG----MPPQ 127 (268)
T ss_dssp EETTEEEEEETT-----TTEEEECCSSCSSCSEEE-ECTTC--CEEEEEECSSCEEEEESS--SCEEEEEET----TTTE
T ss_pred EECCEEEEEcCC-----CCEEEEEECCCCcEEeEE-CCCCc--ceeEEEEeCCEEEEEEcc--CCEEEEEEC----CcCc
Confidence 346777776665 35699999988655 445 66521 111244456778777432 236777653 2345
Q ss_pred eEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE-cCCeEEEEeCCCCcEEE-EEE
Q 035482 284 KEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY-KCRALVSYNPRNEMFKD-LLL 351 (378)
Q Consensus 284 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~-~~~~l~~yd~~t~~~~~-v~~ 351 (378)
+..+|... +++ | ++..+|..++.. +...+..+|++|.+... |..
T Consensus 128 ~~~ti~~~-~eG-----------w------------GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 128 RERTTRYS-GEG-----------W------------GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEEEEECS-SCC-----------C------------CEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEeCC-Cce-----------e------------EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 55666542 111 1 222345555444 46789999999976544 443
No 103
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=50.08 E-value=1.2e+02 Score=26.04 Aligned_cols=56 Identities=16% Similarity=0.127 Sum_probs=36.2
Q ss_pred CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE-EeCCeEEEEEeCCCCceEEEEee
Q 035482 207 NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV-NLGGCLSAAVPCSSGKEIWVMKE 275 (378)
Q Consensus 207 ~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~-~~~G~L~~v~~~~~~~~iW~l~~ 275 (378)
+|.+||.... ...|..+|.++.+...+..|.. ...+. .-+|++.+... ..|+.++.
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~~~----v~~i~~~~dg~l~v~~~----~gl~~~d~ 116 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHALPFM----GSALAKISDSKQLIASD----DGLFLRDT 116 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEECSSC----EEEEEEEETTEEEEEET----TEEEEEET
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEECCCc----ceEEEEeCCCeEEEEEC----CCEEEEEC
Confidence 3789998765 4789999999988877766531 11222 34677766541 24666653
No 104
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=50.04 E-value=1e+02 Score=25.14 Aligned_cols=194 Identities=11% Similarity=0.066 Sum_probs=90.2
Q ss_pred EEeeeCceEEE-eecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCC
Q 035482 95 VVGSCKGLLCL-CDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYG 173 (378)
Q Consensus 95 ~~~s~~GLl~~-~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 173 (378)
+..+.+|-|.+ .+. ....+.++|+.++....++.... ....++.+++.. . +..... .
T Consensus 29 i~~~~~g~l~v~~~~-~~~~i~~~~~~~~~~~~~~~~~~----~~p~~i~~~~~g-~--l~v~~~---~----------- 86 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEG-MYGRVVKLATGSTGTTVLPFNGL----YQPQGLAVDGAG-T--VYVTDF---N----------- 86 (270)
T ss_dssp EEECTTCCEEEEECS-SSCEEEEECC-----EECCCCSC----CSCCCEEECTTC-C--EEEEET---T-----------
T ss_pred eEECCCCCEEEEccC-CCCcEEEecCCCcccceEeeCCc----CCcceeEECCCC-C--EEEEcC---C-----------
Confidence 33445677666 432 45688899998877666554221 112346667643 2 222211 1
Q ss_pred ceEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEE
Q 035482 174 KSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDL 251 (378)
Q Consensus 174 ~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l 251 (378)
..+.+|+..++.-........ ....++.+ +|.+|+.... ...|..+|..+.......... .. ....+
T Consensus 87 -~~i~~~d~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~-~~-~p~~i 155 (270)
T 1rwi_B 87 -NRVVTLAAGSNNQTVLPFDGL---NYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFTG-LN-DPDGV 155 (270)
T ss_dssp -TEEEEECTTCSCCEECCCCSC---SSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCCS-CC-SCCCE
T ss_pred -CEEEEEeCCCceEeeeecCCc---CCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeecccc-CC-CceeE
Confidence 356777777654433321110 01122233 6887776544 468999987765443322111 11 11122
Q ss_pred EEe-CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEE
Q 035482 252 VNL-GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLE 330 (378)
Q Consensus 252 ~~~-~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~ 330 (378)
..- +|+|++.... ...|.+++..+ ... . .... .. .....-+++..+|.+++.
T Consensus 156 ~~~~~g~l~v~~~~--~~~i~~~~~~~-~~~---~-~~~~---~~-----------------~~~p~~i~~d~~g~l~v~ 208 (270)
T 1rwi_B 156 AVDNSGNVYVTDTD--NNRVVKLEAES-NNQ---V-VLPF---TD-----------------ITAPWGIAVDEAGTVYVT 208 (270)
T ss_dssp EECTTCCEEEEEGG--GTEEEEECTTT-CCE---E-ECCC---SS-----------------CCSEEEEEECTTCCEEEE
T ss_pred EEeCCCCEEEEECC--CCEEEEEecCC-Cce---E-eecc---cC-----------------CCCceEEEECCCCCEEEE
Confidence 222 5665555431 11444443222 110 0 0000 00 012234556667777776
Q ss_pred Ec-CCeEEEEeCCCCcEEE
Q 035482 331 YK-CRALVSYNPRNEMFKD 348 (378)
Q Consensus 331 ~~-~~~l~~yd~~t~~~~~ 348 (378)
.. .+++..||++++....
T Consensus 209 ~~~~~~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 209 EHNTNQVVKLLAGSTTSTV 227 (270)
T ss_dssp ETTTSCEEEECTTCSCCEE
T ss_pred ECCCCcEEEEcCCCCccee
Confidence 64 5679999998876544
No 105
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=49.86 E-value=1.1e+02 Score=25.31 Aligned_cols=149 Identities=9% Similarity=0.140 Sum_probs=74.7
Q ss_pred EeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCce
Q 035482 96 VGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKS 175 (378)
Q Consensus 96 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 175 (378)
++..+|.|.+.+. ....+.++++.++....+-... .....++.+|+..+. +.... .. ..
T Consensus 43 ~d~~~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~----~~~p~~ia~d~~~~~--lyv~d---~~-----------~~ 101 (267)
T 1npe_A 43 FDCVDKVVYWTDI-SEPSIGRASLHGGEPTTIIRQD----LGSPEGIALDHLGRT--IFWTD---SQ-----------LD 101 (267)
T ss_dssp EETTTTEEEEEET-TTTEEEEEESSSCCCEEEECTT----CCCEEEEEEETTTTE--EEEEE---TT-----------TT
T ss_pred EecCCCEEEEEEC-CCCEEEEEecCCCCcEEEEECC----CCCccEEEEEecCCe--EEEEE---CC-----------CC
Confidence 3445788877764 4568899999877544332111 123456778875432 22221 11 14
Q ss_pred EEEEEEcCCCCeEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEE
Q 035482 176 EVQILTLGSQEWRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLV 252 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~ 252 (378)
.+.+++.....-+.+.... . ....++.+ +|.+||.... .....|.+++++......+.... .. ...-+.
T Consensus 102 ~I~~~~~~g~~~~~~~~~~--~-~~P~~i~vd~~~g~lyv~~~~---~~~~~I~~~~~dg~~~~~~~~~~-~~-~P~gia 173 (267)
T 1npe_A 102 RIEVAKMDGTQRRVLFDTG--L-VNPRGIVTDPVRGNLYWTDWN---RDNPKIETSHMDGTNRRILAQDN-LG-LPNGLT 173 (267)
T ss_dssp EEEEEETTSCSCEEEECSS--C-SSEEEEEEETTTTEEEEEECC---SSSCEEEEEETTSCCCEEEECTT-CS-CEEEEE
T ss_pred EEEEEEcCCCCEEEEEECC--C-CCccEEEEeeCCCEEEEEECC---CCCcEEEEEecCCCCcEEEEECC-CC-CCcEEE
Confidence 5677777644322221110 0 11223333 5899998753 11368889998765544432111 11 111222
Q ss_pred Ee--CCeEEEEEeCCCCceEEEEee
Q 035482 253 NL--GGCLSAAVPCSSGKEIWVMKE 275 (378)
Q Consensus 253 ~~--~G~L~~v~~~~~~~~iW~l~~ 275 (378)
.- +++|++.... ...|++.+-
T Consensus 174 ~d~~~~~lyv~d~~--~~~I~~~~~ 196 (267)
T 1npe_A 174 FDAFSSQLCWVDAG--THRAECLNP 196 (267)
T ss_dssp EETTTTEEEEEETT--TTEEEEEET
T ss_pred EcCCCCEEEEEECC--CCEEEEEec
Confidence 22 3466665432 226777664
No 106
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=49.06 E-value=1.2e+02 Score=25.47 Aligned_cols=33 Identities=6% Similarity=0.109 Sum_probs=23.0
Q ss_pred EEEEeeCCcEEEEE-cCCeEEEEeCCCCcE-EEEE
Q 035482 318 VLCLLKNGEILLEY-KCRALVSYNPRNEMF-KDLL 350 (378)
Q Consensus 318 ~~~~~~~g~vl~~~-~~~~l~~yd~~t~~~-~~v~ 350 (378)
-+++..+|.+++.. ..+++..||+++++. +.+.
T Consensus 230 ~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 230 GMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred ceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe
Confidence 35666788888875 457899999996554 4443
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=48.67 E-value=1.4e+02 Score=26.05 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=23.6
Q ss_pred eeEEEEEeeCCcEEEEE-cCCeEEEEeCCCCcE
Q 035482 315 FVRVLCLLKNGEILLEY-KCRALVSYNPRNEMF 346 (378)
Q Consensus 315 ~~~~~~~~~~g~vl~~~-~~~~l~~yd~~t~~~ 346 (378)
.+.-+.+..+|..++.. .++.+..||+++++.
T Consensus 247 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 247 KVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 45566777788777665 467899999998764
No 108
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=48.44 E-value=1.3e+02 Score=25.66 Aligned_cols=213 Identities=9% Similarity=0.051 Sum_probs=100.0
Q ss_pred EeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCce
Q 035482 96 VGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKS 175 (378)
Q Consensus 96 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 175 (378)
.-+.+|-|.+.+. ....++++||.+++...+..... ....++.+++.. +++.... .... ...
T Consensus 51 ~~~~~g~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~----~~~~~i~~~~dg---~l~v~~~-~~~~---------~~~ 112 (333)
T 2dg1_A 51 NFDRQGQLFLLDV-FEGNIFKINPETKEIKRPFVSHK----ANPAAIKIHKDG---RLFVCYL-GDFK---------STG 112 (333)
T ss_dssp EECTTSCEEEEET-TTCEEEEECTTTCCEEEEEECSS----SSEEEEEECTTS---CEEEEEC-TTSS---------SCC
T ss_pred EECCCCCEEEEEC-CCCEEEEEeCCCCcEEEEeeCCC----CCcceEEECCCC---cEEEEeC-CCCC---------CCc
Confidence 3345777665543 34689999999998776532111 234566777653 2222211 1000 013
Q ss_pred EEEEEEcCCCCeEEe-CcccceeecCCCcEEE--CCeEEEEeccC-CCCCCcEEEEEECCCceEeEEcCCCccCcceeEE
Q 035482 176 EVQILTLGSQEWRSL-GQVNYHMLEAPSQVLV--NGRLHWCTWPR-YRGPSRLLISFDIADEQFRVVEKPDELHRIHYDL 251 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~-~~~p~~~~~~~~~v~~--~G~lyw~~~~~-~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l 251 (378)
.+.+|+..++.-+.. ...... .....+.+ +|.+|...... .......|..+|.++.++..+.-. .. ....+
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~-~~~~i 187 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTA--YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--IS-VANGI 187 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSC--CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ES-SEEEE
T ss_pred eEEEEeCCCCEEEEEEccCccC--CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CC-cccce
Confidence 577788777755422 211100 01112222 57776654320 011235799999887666554210 00 11122
Q ss_pred EE-eCCe-EEEEEeCCCCceEEEEeeCCCCCceeeE-EEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEE
Q 035482 252 VN-LGGC-LSAAVPCSSGKEIWVMKEYDVKESWIKE-YNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEIL 328 (378)
Q Consensus 252 ~~-~~G~-L~~v~~~~~~~~iW~l~~~~~~~~W~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl 328 (378)
.. -+|+ |++.... . ..|++.+........... ..+...... .....-+++..+|.++
T Consensus 188 ~~~~dg~~l~v~~~~-~-~~i~~~d~~~~g~~~~~~~~~~~~~~~~------------------~~~~~~i~~d~~G~l~ 247 (333)
T 2dg1_A 188 ALSTDEKVLWVTETT-A-NRLHRIALEDDGVTIQPFGATIPYYFTG------------------HEGPDSCCIDSDDNLY 247 (333)
T ss_dssp EECTTSSEEEEEEGG-G-TEEEEEEECTTSSSEEEEEEEEEEECCS------------------SSEEEEEEEBTTCCEE
T ss_pred EECCCCCEEEEEeCC-C-CeEEEEEecCCCcCcccccceEEEecCC------------------CCCCCceEECCCCCEE
Confidence 22 2565 4444321 1 145544431111112111 111100000 0122336666788887
Q ss_pred EEEc-CCeEEEEeCCCCcEEEEEE
Q 035482 329 LEYK-CRALVSYNPRNEMFKDLLL 351 (378)
Q Consensus 329 ~~~~-~~~l~~yd~~t~~~~~v~~ 351 (378)
+... ++++..||++.+.++.+..
T Consensus 248 v~~~~~~~v~~~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 248 VAMYGQGRVLVFNKRGYPIGQILI 271 (333)
T ss_dssp EEEETTTEEEEECTTSCEEEEEEC
T ss_pred EEEcCCCEEEEECCCCCEEEEEEc
Confidence 7764 4789999997776666653
No 109
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=47.64 E-value=33 Score=30.08 Aligned_cols=139 Identities=10% Similarity=0.029 Sum_probs=61.7
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCce-EeEE-cCCCccCcceeE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQ-FRVV-EKPDELHRIHYD 250 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~-~~~i-~lP~~~~~~~~~ 250 (378)
..+.||+..++.|+....+.... ..-..+.+ +|.+...+.. .+.|..+|+.+.. +..+ .+.. ......
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~-----d~~v~vwd~~~~~~~~~~~~~~~--~~~~v~ 104 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHD-KIVTCVDWAPKSNRIVTCSQ-----DRNAYVYEKRPDGTWKQTLVLLR--LNRAAT 104 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCS-SCEEEEEECTTTCCEEEEET-----TSSEEEC------CCCCEEECCC--CSSCEE
T ss_pred CEEEEEEccCCceEEEEEEecCC-ceEEEEEEeCCCCEEEEEeC-----CCeEEEEEcCCCCceeeeeEecc--cCCceE
Confidence 35678888888777655332110 00011111 3433333322 4678889988766 3222 1111 111222
Q ss_pred EEEe--CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEE
Q 035482 251 LVNL--GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEIL 328 (378)
Q Consensus 251 l~~~--~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl 328 (378)
-+.+ +|++.+....+....||.++. ...|.....+... . ...+.-+.+..+|..+
T Consensus 105 ~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~--h------------------~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 105 FVRWSPNEDKFAVGSGARVISVCYFEQ---ENDWWVSKHLKRP--L------------------RSTILSLDWHPNNVLL 161 (377)
T ss_dssp EEECCTTSSCCEEEESSSCEEECCC--------CCCCEEECSS--C------------------CSCEEEEEECTTSSEE
T ss_pred EEEECCCCCEEEEEecCCeEEEEEECC---cccceeeeEeecc--c------------------CCCeEEEEEcCCCCEE
Confidence 2222 566555544433338887764 2345444444320 0 0134455666677766
Q ss_pred EEE-cCCeEEEEeCCCC
Q 035482 329 LEY-KCRALVSYNPRNE 344 (378)
Q Consensus 329 ~~~-~~~~l~~yd~~t~ 344 (378)
+.. .++.+..||++++
T Consensus 162 ~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVR 178 (377)
T ss_dssp EEEESSSCEEEEEECCS
T ss_pred EEEeCCCEEEEEEEEec
Confidence 654 4567888998643
No 110
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=47.28 E-value=1.4e+02 Score=25.68 Aligned_cols=137 Identities=14% Similarity=0.037 Sum_probs=70.4
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEE-cCCCccCcceeEE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVV-EKPDELHRIHYDL 251 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~l 251 (378)
..+.+|+..++.|+....+.... ..-..+.+ +|.+...+.. .+.|..+|+.+.++... .+... .....-
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~~--~~~v~~ 101 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHN-GQVTGVDWAPDSNRIVTCGT-----DRNAYVWTLKGRTWKPTLVILRI--NRAARC 101 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCS-SCEEEEEEETTTTEEEEEET-----TSCEEEEEEETTEEEEEEECCCC--SSCEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCC-CcccEEEEeCCCCEEEEEcC-----CCeEEEEECCCCeeeeeEEeecC--CCceeE
Confidence 56888888888765543221100 00011111 3544444333 46899999988776543 22221 112222
Q ss_pred EEe--CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEE
Q 035482 252 VNL--GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILL 329 (378)
Q Consensus 252 ~~~--~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~ 329 (378)
+.+ +|++.++...+....+|.++. ...|.....+.... ...+.-+.+..++..++
T Consensus 102 ~~~~~~~~~l~~~~~d~~v~i~d~~~---~~~~~~~~~~~~~~--------------------~~~i~~~~~~~~~~~l~ 158 (372)
T 1k8k_C 102 VRWAPNEKKFAVGSGSRVISICYFEQ---ENDWWVCKHIKKPI--------------------RSTVLSLDWHPNSVLLA 158 (372)
T ss_dssp EEECTTSSEEEEEETTSSEEEEEEET---TTTEEEEEEECTTC--------------------CSCEEEEEECTTSSEEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEEecC---CCcceeeeeeeccc--------------------CCCeeEEEEcCCCCEEE
Confidence 222 566665555433338999875 23454444332210 01344556666777666
Q ss_pred EE-cCCeEEEEeCC
Q 035482 330 EY-KCRALVSYNPR 342 (378)
Q Consensus 330 ~~-~~~~l~~yd~~ 342 (378)
.. .++.+..||.+
T Consensus 159 ~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 159 AGSCDFKCRIFSAY 172 (372)
T ss_dssp EEETTSCEEEEECC
T ss_pred EEcCCCCEEEEEcc
Confidence 54 46778889954
No 111
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=46.96 E-value=1.9e+02 Score=27.27 Aligned_cols=194 Identities=8% Similarity=0.082 Sum_probs=98.2
Q ss_pred eeCceEEEeecCCCceEEEEcccccceee-CCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceE
Q 035482 98 SCKGLLCLCDSSTKNRLYVYNPFTRNYVE-LPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSE 176 (378)
Q Consensus 98 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 176 (378)
+-+|.+++... ....+.|+|+.|++... ++... . ..++.++|.. .|-.+. . . . ..
T Consensus 146 ~p~~~~~vs~~-~d~~V~v~D~~t~~~~~~i~~g~-----~-~~~v~~spdg-~~l~v~-~--~-d------------~~ 201 (543)
T 1nir_A 146 DLPNLFSVTLR-DAGQIALVDGDSKKIVKVIDTGY-----A-VHISRMSASG-RYLLVI-G--R-D------------AR 201 (543)
T ss_dssp CGGGEEEEEEG-GGTEEEEEETTTCCEEEEEECST-----T-EEEEEECTTS-CEEEEE-E--T-T------------SE
T ss_pred CCCCEEEEEEc-CCCeEEEEECCCceEEEEEecCc-----c-cceEEECCCC-CEEEEE-C--C-C------------Ce
Confidence 34677766653 44689999999988653 34221 1 3456677753 333332 1 0 0 45
Q ss_pred EEEEEc--CCCCeEEeCcccceeecCCCcEEE------CCe-EEEEeccCCCCCCcEEEEEECCCceE-eEEcCCCcc--
Q 035482 177 VQILTL--GSQEWRSLGQVNYHMLEAPSQVLV------NGR-LHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPDEL-- 244 (378)
Q Consensus 177 ~~Vyss--~~~~W~~~~~~p~~~~~~~~~v~~------~G~-lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~-- 244 (378)
+.+|+. .++. .+..++... ...++.+ +|. +|..... ...|..+|..+.+- ..++.+...
T Consensus 202 V~v~D~~~~t~~--~~~~i~~g~--~p~~va~sp~~~~dg~~l~v~~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~ 272 (543)
T 1nir_A 202 IDMIDLWAKEPT--KVAEIKIGI--EARSVESSKFKGYEDRYTIAGAYW-----PPQFAIMDGETLEPKQIVSTRGMTVD 272 (543)
T ss_dssp EEEEETTSSSCE--EEEEEECCS--EEEEEEECCSTTCTTTEEEEEEEE-----SSEEEEEETTTCCEEEEEECCEECSS
T ss_pred EEEEECcCCCCc--EEEEEecCC--CcceEEeCCCcCCCCCEEEEEEcc-----CCeEEEEeccccccceeecccCcccC
Confidence 788888 5542 222111110 0112222 454 4443332 46899999987544 445553210
Q ss_pred ------CcceeEEEEe-CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeE
Q 035482 245 ------HRIHYDLVNL-GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVR 317 (378)
Q Consensus 245 ------~~~~~~l~~~-~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (378)
......+... +|...++.... ...||+.+-...+. .+..+|... ....
T Consensus 273 ~~~~~~~~~v~~i~~s~~~~~~~vs~~~-~g~i~vvd~~~~~~--l~~~~i~~~----------------------~~~~ 327 (543)
T 1nir_A 273 TQTYHPEPRVAAIIASHEHPEFIVNVKE-TGKVLLVNYKDIDN--LTVTSIGAA----------------------PFLH 327 (543)
T ss_dssp SCCEESCCCEEEEEECSSSSEEEEEETT-TTEEEEEECTTSSS--CEEEEEECC----------------------SSCC
T ss_pred ccccccCCceEEEEECCCCCEEEEEECC-CCeEEEEEecCCCc--ceeEEeccC----------------------cCcc
Confidence 0011223333 35555554432 23676665322111 122233320 1223
Q ss_pred EEEEeeCCcEEEEEc--CCeEEEEeCCCCcEEEE
Q 035482 318 VLCLLKNGEILLEYK--CRALVSYNPRNEMFKDL 349 (378)
Q Consensus 318 ~~~~~~~g~vl~~~~--~~~l~~yd~~t~~~~~v 349 (378)
-+++..+|+.++... ++.+.++|.+++++...
T Consensus 328 ~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp CEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CceECCCCCEEEEEecCCCeEEEEECCCCeEEEe
Confidence 356667888766543 56799999999987664
No 112
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=46.43 E-value=1.5e+02 Score=25.78 Aligned_cols=120 Identities=10% Similarity=0.120 Sum_probs=64.7
Q ss_pred EEeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCc
Q 035482 95 VVGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGK 174 (378)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 174 (378)
.++..+|.|.+.+......++..++-......+-... ....-|+++|+..+ ++.... .. .
T Consensus 128 avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~----l~~Pnglavd~~~~--~lY~aD---~~-----------~ 187 (318)
T 3sov_A 128 ALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE----IYWPNGLTLDYEEQ--KLYWAD---AK-----------L 187 (318)
T ss_dssp EEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS----CSCEEEEEEETTTT--EEEEEE---TT-----------T
T ss_pred EEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC----CCCccEEEEeccCC--EEEEEE---CC-----------C
Confidence 4556788888876434567888887654433331111 12345788887543 233221 11 1
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCce-EeEEcCC
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQ-FRVVEKP 241 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~-~~~i~lP 241 (378)
..+++++.....-+.+..-. .......++.++.+||.... ...|.++|..+.+ -..+..|
T Consensus 188 ~~I~~~d~dG~~~~~~~~~~--~~~P~glav~~~~lywtd~~-----~~~V~~~~~~~G~~~~~i~~~ 248 (318)
T 3sov_A 188 NFIHKSNLDGTNRQAVVKGS--LPHPFALTLFEDILYWTDWS-----THSILACNKYTGEGLREIHSD 248 (318)
T ss_dssp TEEEEEETTSCSCEEEECSC--CSCEEEEEEETTEEEEEETT-----TTEEEEEETTTCCSCEEEECC
T ss_pred CEEEEEcCCCCceEEEecCC--CCCceEEEEeCCEEEEEecC-----CCeEEEEECCCCCceEEEeCC
Confidence 45677776543333222100 00111223468899999765 5799999995443 3455544
No 113
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=46.09 E-value=1.4e+02 Score=25.43 Aligned_cols=143 Identities=12% Similarity=0.023 Sum_probs=70.0
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEECCe-EEEEeccCCCCCCcEEEEEECCCceE-eEEcCCCccC-----cc
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGR-LHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPDELH-----RI 247 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~-----~~ 247 (378)
..+.+++..++.-...-..... ...-.+.-+|. +|..... ...|..+|+.+.+. ..++++.... ..
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDLK--PFGATINNTTQTLWFGNTV-----NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPL 141 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESSC--CCSEEEETTTTEEEEEETT-----TTEEEEEETTTCCEEEEEESCCCCCCSSCCCC
T ss_pred ccEEEEcCCCCeEEEEEecCCC--cceEEECCCCCEEEEEecC-----CCEEEEEeCCCCeeEEEEecCCCccccccCCC
Confidence 4677787777643221111100 01112233565 5555543 46899999987654 5566643211 01
Q ss_pred ee-EEEE-eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCC
Q 035482 248 HY-DLVN-LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNG 325 (378)
Q Consensus 248 ~~-~l~~-~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 325 (378)
.. .+.. -+|+..++........||+.+-. .......+...-. ...-+.+..+|
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~----~~~~~~~~~~~~~---------------------~~~~~~~s~dg 196 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGKESVIWVVDGG----NIKLKTAIQNTGK---------------------MSTGLALDSEG 196 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESSSCEEEEEETT----TTEEEEEECCCCT---------------------TCCCCEEETTT
T ss_pred CCceEEECCCCCEEEEEecCCCceEEEEcCC----CCceEEEecCCCC---------------------ccceEEECCCC
Confidence 12 2222 26664444432222356666532 2334444432100 01123444567
Q ss_pred cEEEEE-cCCeEEEEeCCCCcEEEE
Q 035482 326 EILLEY-KCRALVSYNPRNEMFKDL 349 (378)
Q Consensus 326 ~vl~~~-~~~~l~~yd~~t~~~~~v 349 (378)
+.++.. .++.+..||+++++....
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEE
Confidence 655554 457788999999876653
No 114
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=45.78 E-value=1.4e+02 Score=25.37 Aligned_cols=157 Identities=9% Similarity=-0.028 Sum_probs=84.6
Q ss_pred eeCceEEEeec-CCCceEEEEcccccceee-CCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCce
Q 035482 98 SCKGLLCLCDS-STKNRLYVYNPFTRNYVE-LPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKS 175 (378)
Q Consensus 98 s~~GLl~~~~~-~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 175 (378)
+-+|.|....+ ...+.+.+.++.|++... +|... .....|+..+.. ++..... . ..
T Consensus 29 ~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~----~~fgeGi~~~g~----~lyv~t~---~-----------~~ 86 (266)
T 2iwa_A 29 AENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD----SYFGEGLTLLNE----KLYQVVW---L-----------KN 86 (266)
T ss_dssp CSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT----TCCEEEEEEETT----EEEEEET---T-----------CS
T ss_pred eCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC----CcceEEEEEeCC----EEEEEEe---c-----------CC
Confidence 34487777654 235789999999998654 33211 133445665532 3433321 1 15
Q ss_pred EEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCc-eEeEEcCCCc-cC-cceeEEE
Q 035482 176 EVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADE-QFRVVEKPDE-LH-RIHYDLV 252 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e-~~~~i~lP~~-~~-~~~~~l~ 252 (378)
.+.||+..+.. .+..++.. ....-++..+|.-.|.+.. .+.|..+|+++. .-..|++... .. .....+.
T Consensus 87 ~v~viD~~t~~--v~~~i~~g-~~~g~glt~Dg~~l~vs~g-----s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 87 IGFIYDRRTLS--NIKNFTHQ-MKDGWGLATDGKILYGSDG-----TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp EEEEEETTTTE--EEEEEECC-SSSCCEEEECSSSEEEECS-----SSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred EEEEEECCCCc--EEEEEECC-CCCeEEEEECCCEEEEECC-----CCeEEEEECCCCcEEEEEEECCCCcccccceeEE
Confidence 68889988752 23323322 1123345556654445433 579999999884 3455654321 00 0011222
Q ss_pred EeCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEcc
Q 035482 253 NLGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGI 290 (378)
Q Consensus 253 ~~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~ 290 (378)
..+|+|++... ...+|.+.+- ..+....+|++
T Consensus 159 ~~dg~lyvn~~--~~~~V~vID~----~tg~V~~~I~~ 190 (266)
T 2iwa_A 159 YINGEVWANIW--QTDCIARISA----KDGTLLGWILL 190 (266)
T ss_dssp EETTEEEEEET--TSSEEEEEET----TTCCEEEEEEC
T ss_pred EECCEEEEecC--CCCeEEEEEC----CCCcEEEEEEC
Confidence 33787765442 1237887764 34566677765
No 115
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=44.78 E-value=49 Score=24.08 Aligned_cols=42 Identities=19% Similarity=0.305 Sum_probs=30.0
Q ss_pred ceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEE
Q 035482 112 NRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKID 157 (378)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~ 157 (378)
-.+++.+|.|+.| +|... ..+...+.+..|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W--~p~~~--~~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKW--VPAGG--STGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEE--EEGGG--CCSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCce--EECCC--CCCceEEEEEEECCCCEEEEEEEE
Confidence 4688999999965 55432 112456778889888899999763
No 116
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=44.43 E-value=2.2e+02 Score=27.20 Aligned_cols=194 Identities=9% Similarity=0.036 Sum_probs=100.8
Q ss_pred CceEEEeecCCCceEEEEcccccceee-CCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEE
Q 035482 100 KGLLCLCDSSTKNRLYVYNPFTRNYVE-LPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQ 178 (378)
Q Consensus 100 ~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 178 (378)
++++.+... ..+.+.|+|+.|++... +|... ...++.+.+.. .|-.+. . .. ..+.
T Consensus 166 ~~~~~V~~~-~~~~V~viD~~t~~v~~~i~~g~------~p~~v~~SpDG-r~lyv~--~--~d------------g~V~ 221 (567)
T 1qks_A 166 ENLFSVTLR-DAGQIALIDGSTYEIKTVLDTGY------AVHISRLSASG-RYLFVI--G--RD------------GKVN 221 (567)
T ss_dssp GGEEEEEET-TTTEEEEEETTTCCEEEEEECSS------CEEEEEECTTS-CEEEEE--E--TT------------SEEE
T ss_pred CceEEEEeC-CCCeEEEEECCCCeEEEEEeCCC------CccceEECCCC-CEEEEE--c--CC------------CeEE
Confidence 345555543 45789999999988663 55432 22356677753 343332 1 11 4688
Q ss_pred EEEcCCCCeEEeCcccceeecCCCcE-EE-----CCe-EEEEeccCCCCCCcEEEEEECCCceE-eEEcCCCc-cC----
Q 035482 179 ILTLGSQEWRSLGQVNYHMLEAPSQV-LV-----NGR-LHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPDE-LH---- 245 (378)
Q Consensus 179 Vyss~~~~W~~~~~~p~~~~~~~~~v-~~-----~G~-lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~-~~---- 245 (378)
+|+..+.+-+.+...+... ...++ +. +|+ +|..... ...+.++|..+.+- ..+++... ..
T Consensus 222 viD~~~~t~~~v~~i~~G~--~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~ 294 (567)
T 1qks_A 222 MIDLWMKEPTTVAEIKIGS--EARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEY 294 (567)
T ss_dssp EEETTSSSCCEEEEEECCS--EEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCE
T ss_pred EEECCCCCCcEeEEEecCC--CCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccc
Confidence 8888522212222222111 01122 22 564 4444433 57899999877443 34554321 11
Q ss_pred --c-ceeEEEEe-CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEE
Q 035482 246 --R-IHYDLVNL-GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCL 321 (378)
Q Consensus 246 --~-~~~~l~~~-~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (378)
. ....+... ++...++.. .+...||+.+-.. ....+...|+.. .+..-+++
T Consensus 295 ~p~~rva~i~~s~~~~~~vv~~-~~~g~v~~vd~~~--~~~~~v~~i~~~----------------------~~~~d~~~ 349 (567)
T 1qks_A 295 HPEPRVAAILASHYRPEFIVNV-KETGKILLVDYTD--LNNLKTTEISAE----------------------RFLHDGGL 349 (567)
T ss_dssp ESCCCEEEEEECSSSSEEEEEE-TTTTEEEEEETTC--SSEEEEEEEECC----------------------SSEEEEEE
T ss_pred cCCCceEEEEEcCCCCEEEEEe-cCCCeEEEEecCC--Cccceeeeeecc----------------------ccccCceE
Confidence 0 11123322 334444443 2333888776322 233334444321 23445667
Q ss_pred eeCCcEEEEEc--CCeEEEEeCCCCcEEEE
Q 035482 322 LKNGEILLEYK--CRALVSYNPRNEMFKDL 349 (378)
Q Consensus 322 ~~~g~vl~~~~--~~~l~~yd~~t~~~~~v 349 (378)
..+|+.+++.. .+++.++|.+++++...
T Consensus 350 ~pdgr~~~va~~~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 350 DGSHRYFITAANARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp CTTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCCcEEEE
Confidence 77888877653 57899999999987654
No 117
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=43.69 E-value=1.6e+02 Score=25.59 Aligned_cols=70 Identities=9% Similarity=0.152 Sum_probs=30.7
Q ss_pred eeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEE
Q 035482 98 SCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEV 177 (378)
Q Consensus 98 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 177 (378)
+.+|.++... ....+.|||..+++.................++.+.|.. .+-+. .. . ...+
T Consensus 103 s~d~~~l~~s--~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s--gs---~-----------dg~v 163 (357)
T 4g56_B 103 VSEKGILVAS--DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVS--GG---K-----------DFSV 163 (357)
T ss_dssp ETTTEEEEEE--TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEE--EE---T-----------TSCE
T ss_pred cCCCCEEEEE--CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEE--Ee---C-----------CCeE
Confidence 4455555443 346799999999876554432211112334456666642 23222 11 1 1457
Q ss_pred EEEEcCCCC
Q 035482 178 QILTLGSQE 186 (378)
Q Consensus 178 ~Vyss~~~~ 186 (378)
.+++.+++.
T Consensus 164 ~iwd~~~~~ 172 (357)
T 4g56_B 164 KVWDLSQKA 172 (357)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 888888764
No 118
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=43.53 E-value=1.5e+02 Score=25.15 Aligned_cols=109 Identities=10% Similarity=0.078 Sum_probs=56.4
Q ss_pred eCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEE
Q 035482 99 CKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQ 178 (378)
Q Consensus 99 ~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 178 (378)
.+|-|.+.+. ...+++.++|.++....++.. ....++.+++..+ ++...... . ...+.
T Consensus 41 ~~g~lyv~d~-~~~~I~~~d~~g~~~~~~~~~------~~p~gia~~~dG~---l~vad~~~-~-----------~~~v~ 98 (306)
T 2p4o_A 41 PDGTIFVTNH-EVGEIVSITPDGNQQIHATVE------GKVSGLAFTSNGD---LVATGWNA-D-----------SIPVV 98 (306)
T ss_dssp TTSCEEEEET-TTTEEEEECTTCCEEEEEECS------SEEEEEEECTTSC---EEEEEECT-T-----------SCEEE
T ss_pred CCCCEEEEeC-CCCeEEEECCCCceEEEEeCC------CCceeEEEcCCCc---EEEEeccC-C-----------cceEE
Confidence 4777766654 356789999987654433321 2355677777532 32222110 0 02455
Q ss_pred EEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCce
Q 035482 179 ILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQ 234 (378)
Q Consensus 179 Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~ 234 (378)
.|+..++..+.+...+.........+..+|.+|..... .+.|..+|..+..
T Consensus 99 ~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQPS 149 (306)
T ss_dssp EEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT-----TTEEEEEETTTTE
T ss_pred EEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC-----CCeEEEEeCCCCc
Confidence 67777777665433221100000011224556655432 4689999987643
No 119
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=43.42 E-value=69 Score=23.63 Aligned_cols=40 Identities=25% Similarity=0.566 Sum_probs=29.3
Q ss_pred ceEEEEccccc-ceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEE
Q 035482 112 NRLYVYNPFTR-NYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKID 157 (378)
Q Consensus 112 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~ 157 (378)
-.+++.||.|+ .|...-.. ...+.+.+|+..+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKH------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSS------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCC------ceEEEEEEcCCCCEEEEEEcc
Confidence 46889999996 88643332 256667889888899999754
No 120
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=42.44 E-value=2.5e+02 Score=27.37 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=63.8
Q ss_pred eCceEEEeecCCCceEEEEcccccceeeC--CCCCC-C----CCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccC
Q 035482 99 CKGLLCLCDSSTKNRLYVYNPFTRNYVEL--PKSTE-F----QTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRG 171 (378)
Q Consensus 99 ~~GLl~~~~~~~~~~~~V~NP~T~~~~~L--P~~~~-~----~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 171 (378)
.+|.|.+... ...++-+|+.||+.++- +.... . ......-+..++. =+|+... .
T Consensus 76 ~~g~vyv~~~--~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~----~~v~v~~----~--------- 136 (677)
T 1kb0_A 76 VDGIMYVSAS--WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK----GKVYVGA----W--------- 136 (677)
T ss_dssp ETTEEEEECG--GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET----TEEEEEC----T---------
T ss_pred ECCEEEEECC--CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC----CEEEEEc----C---------
Confidence 4788877652 46788899999885532 22110 0 0000001122222 1333321 1
Q ss_pred CCceEEEEEEcCCC--CeEEeCc--ccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCc--eEeEE
Q 035482 172 YGKSEVQILTLGSQ--EWRSLGQ--VNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADE--QFRVV 238 (378)
Q Consensus 172 ~~~~~~~Vyss~~~--~W~~~~~--~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e--~~~~i 238 (378)
...+..++..+| .|+.... .+........++..+|.+|.-....+......|.+||..|. .|+.-
T Consensus 137 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 137 --DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp --TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred --CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 145777888888 6886432 11111234567788999988664321123578999999764 56553
No 121
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=42.28 E-value=1.7e+02 Score=25.28 Aligned_cols=143 Identities=13% Similarity=0.111 Sum_probs=68.5
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEc-CCCccCcceeEE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVE-KPDELHRIHYDL 251 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~l 251 (378)
..+.|++..++.|.............-..+.+ +|..-..+.. ...+..+|+.+..+..+. +.. +.....-
T Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~-----D~~v~iw~~~~~~~~~~~~~~~--h~~~v~~ 110 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF-----DATTCIWKKNQDDFECVTTLEG--HENEVKS 110 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET-----TSCEEEEEECCC-EEEEEEECC--CSSCEEE
T ss_pred CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC-----CCcEEEEEccCCCeEEEEEccC--CCCCceE
Confidence 45788888888775322111000000011111 3443333322 467778888777654432 221 1112222
Q ss_pred EEe--CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEE
Q 035482 252 VNL--GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILL 329 (378)
Q Consensus 252 ~~~--~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~ 329 (378)
+.+ +|++.+....+....||.++.. ..+.....+.-. ...+.-+.+..++++++
T Consensus 111 v~~sp~~~~l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~h---------------------~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 111 VAWAPSGNLLATCSRDKSVWVWEVDEE---DEYECVSVLNSH---------------------TQDVKHVVWHPSQELLA 166 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECTT---SCEEEEEEECCC---------------------CSCEEEEEECSSSSCEE
T ss_pred EEEeCCCCEEEEEECCCeEEEEECCCC---CCeEEEEEecCc---------------------CCCeEEEEECCCCCEEE
Confidence 222 5666666554433489988652 234333333211 01234455556666655
Q ss_pred EE-cCCeEEEEeCCCCcEEE
Q 035482 330 EY-KCRALVSYNPRNEMFKD 348 (378)
Q Consensus 330 ~~-~~~~l~~yd~~t~~~~~ 348 (378)
.. .++.+..||.+++++..
T Consensus 167 s~s~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVC 186 (345)
T ss_dssp EEETTSCEEEEEEETTEEEE
T ss_pred EEeCCCcEEEEEecCCCEEE
Confidence 54 35667788877776543
No 122
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=41.62 E-value=1.6e+02 Score=24.97 Aligned_cols=33 Identities=6% Similarity=-0.065 Sum_probs=23.1
Q ss_pred eEEEEEeeCCcEEEEE-cCCeEEEEeCCCCcEEE
Q 035482 316 VRVLCLLKNGEILLEY-KCRALVSYNPRNEMFKD 348 (378)
Q Consensus 316 ~~~~~~~~~g~vl~~~-~~~~l~~yd~~t~~~~~ 348 (378)
+.-+++..+|..++.. .++.+..||.++++...
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK 309 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE
Confidence 4556666777766665 46779999999876543
No 123
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=40.92 E-value=2e+02 Score=25.84 Aligned_cols=140 Identities=11% Similarity=0.009 Sum_probs=70.1
Q ss_pred eEEEEEEcCCCCeEEe-C-cccceeecCCCcEEE-CCeEEEEeccCCCCCCcEEEEEECCCceE-eEEcCCC--------
Q 035482 175 SEVQILTLGSQEWRSL-G-QVNYHMLEAPSQVLV-NGRLHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPD-------- 242 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~-~-~~p~~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~-------- 242 (378)
..+.||+..++.-... . ..... -..+.+ +|.+...+.. .+.|..+|+.+.+. ..+....
T Consensus 220 ~~i~vwd~~~~~~~~~~~~~h~~~----v~~~~~sd~~~l~s~~~-----d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 290 (450)
T 2vdu_B 220 EHIKISHYPQCFIVDKWLFGHKHF----VSSICCGKDYLLLSAGG-----DDKIFAWDWKTGKNLSTFDYNSLIKPYLND 290 (450)
T ss_dssp SCEEEEEESCTTCEEEECCCCSSC----EEEEEECSTTEEEEEES-----SSEEEEEETTTCCEEEEEECHHHHGGGCCT
T ss_pred CcEEEEECCCCceeeeeecCCCCc----eEEEEECCCCEEEEEeC-----CCeEEEEECCCCcEeeeecchhhhhhhhhh
Confidence 4578888887643321 1 11100 111222 5655554443 47899999987653 3343221
Q ss_pred --------------ccCcceeEEEEe-CCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCcccc
Q 035482 243 --------------ELHRIHYDLVNL-GGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRD 306 (378)
Q Consensus 243 --------------~~~~~~~~l~~~-~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~ 306 (378)
........+... +|+..++....... .||.+.+.. ...+....++...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~-~~~l~~~~~~~~~--------------- 354 (450)
T 2vdu_B 291 QHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQ-KGDLALKQIITFP--------------- 354 (450)
T ss_dssp TSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSS-TTCEEEEEEEECS---------------
T ss_pred cccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCC-CCceeeccEeccC---------------
Confidence 000011122222 46666666644554 999983211 2445555555431
Q ss_pred ccccccCceeEEEEEeeCCcEEEEEcCC----------eEEEEeCCCCcEE
Q 035482 307 SKFFRNRSFVRVLCLLKNGEILLEYKCR----------ALVSYNPRNEMFK 347 (378)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~g~vl~~~~~~----------~l~~yd~~t~~~~ 347 (378)
..+.-+++.. +.+++..... .++.++.++++++
T Consensus 355 -------~~v~~~~~~~-~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 355 -------YNVISLSAHN-DEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp -------SCEEEEEEET-TEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred -------CceEEEEecC-CcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 1123344444 3455544321 7888888888875
No 124
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=40.53 E-value=1.7e+02 Score=24.82 Aligned_cols=30 Identities=7% Similarity=-0.215 Sum_probs=20.3
Q ss_pred eEEEEEeeCCcEEEE--EcCCeEEEEeCCCCc
Q 035482 316 VRVLCLLKNGEILLE--YKCRALVSYNPRNEM 345 (378)
Q Consensus 316 ~~~~~~~~~g~vl~~--~~~~~l~~yd~~t~~ 345 (378)
+.-+.+..+|..++. ..++.+..||+++.+
T Consensus 324 v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 324 ISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 455667778877763 446889999988653
No 125
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=40.41 E-value=1.6e+02 Score=24.67 Aligned_cols=109 Identities=14% Similarity=0.187 Sum_probs=54.4
Q ss_pred ceEEEeecCCCceEEEEcccccceee-CCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEE
Q 035482 101 GLLCLCDSSTKNRLYVYNPFTRNYVE-LPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQI 179 (378)
Q Consensus 101 GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~V 179 (378)
|-+++... ....++++|+.|++.++ ++...... .. .....+.. + ++. .. . ..+..
T Consensus 5 ~~~lv~~~-~~~~v~~~d~~tG~~~w~~~~~~~~~--~~--~~~~~pdG-~--ilv-s~---~------------~~V~~ 60 (276)
T 3no2_A 5 QHLLVGGS-GWNKIAIINKDTKEIVWEYPLEKGWE--CN--SVAATKAG-E--ILF-SY---S------------KGAKM 60 (276)
T ss_dssp CEEEEECT-TCSEEEEEETTTTEEEEEEECCTTCC--CC--EEEECTTS-C--EEE-EC---B------------SEEEE
T ss_pred CcEEEeeC-CCCEEEEEECCCCeEEEEeCCCccCC--Cc--CeEECCCC-C--EEE-eC---C------------CCEEE
Confidence 33444432 56789999999988654 34321001 11 12334432 2 332 11 1 45777
Q ss_pred EEcCCC--CeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEeEEcC
Q 035482 180 LTLGSQ--EWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEK 240 (378)
Q Consensus 180 yss~~~--~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~l 240 (378)
|+. +| .|+......... ....+..+|.++..... ....|++||.+.+.-..+.+
T Consensus 61 ~d~-~G~~~W~~~~~~~~~~--~~~~~~~dG~~lv~~~~----~~~~v~~vd~~Gk~l~~~~~ 116 (276)
T 3no2_A 61 ITR-DGRELWNIAAPAGCEM--QTARILPDGNALVAWCG----HPSTILEVNMKGEVLSKTEF 116 (276)
T ss_dssp ECT-TSCEEEEEECCTTCEE--EEEEECTTSCEEEEEES----TTEEEEEECTTSCEEEEEEE
T ss_pred ECC-CCCEEEEEcCCCCccc--cccEECCCCCEEEEecC----CCCEEEEEeCCCCEEEEEec
Confidence 887 55 677543111111 12233446776655432 13688999987665444443
No 126
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=40.02 E-value=1.8e+02 Score=24.86 Aligned_cols=29 Identities=7% Similarity=0.114 Sum_probs=22.1
Q ss_pred CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcC
Q 035482 207 NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEK 240 (378)
Q Consensus 207 ~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~l 240 (378)
+|.++|.... ...|..||..+..+..+..
T Consensus 29 ~g~~l~v~~~-----~~~i~~~~~~~~~~~~~~~ 57 (322)
T 2fp8_A 29 TNKGFYTSVQ-----DGRVIKYEGPNSGFVDFAY 57 (322)
T ss_dssp TCSSEEEECT-----TSEEEEECCTTTCEEEEEE
T ss_pred CCCEEEEEcC-----CCeEEEECCCCCceEEEec
Confidence 5787887654 4789999999887776643
No 127
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=39.43 E-value=1.9e+02 Score=25.05 Aligned_cols=63 Identities=11% Similarity=-0.023 Sum_probs=34.7
Q ss_pred CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEE--eCCeEEEEEeCCCCceEEEEeeCC
Q 035482 207 NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVN--LGGCLSAAVPCSSGKEIWVMKEYD 277 (378)
Q Consensus 207 ~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~--~~G~L~~v~~~~~~~~iW~l~~~~ 277 (378)
+|.+||.... ...|.++|++...-..+.- .... ...-++. .+|.|+..... ....|+...-.|
T Consensus 90 ~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~-~~~~-~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG 154 (318)
T 3sov_A 90 GEKLYWTDSE-----TNRIEVSNLDGSLRKVLFW-QELD-QPRAIALDPSSGFMYWTDWG-EVPKIERAGMDG 154 (318)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCSCEEEEC-SSCS-SEEEEEEEGGGTEEEEEECS-SSCEEEEEETTS
T ss_pred CCeEEEEECC-----CCEEEEEECCCCcEEEEEe-CCCC-CccEEEEeCCCCEEEEEecC-CCCEEEEEEcCC
Confidence 6899998765 4789999998754333321 1111 1112222 24666655422 223777776544
No 128
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=39.07 E-value=7.9 Score=34.90 Aligned_cols=31 Identities=13% Similarity=0.070 Sum_probs=19.2
Q ss_pred CCcEEECCeEEEEeccCCCCCCcEEEEEECCCc--eEeE
Q 035482 201 PSQVLVNGRLHWCTWPRYRGPSRLLISFDIADE--QFRV 237 (378)
Q Consensus 201 ~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e--~~~~ 237 (378)
+++++.+|.+|.-..+ +.|.++|..+. .|+.
T Consensus 3 ssP~v~~~~v~~gs~d------g~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 3 STVTLPETLLFVSTLD------GSLHAVSKRTGSIKWTL 35 (369)
T ss_dssp -----CTTEEEEEETT------SEEEEEETTTCCEEEEE
T ss_pred CCCeeeCCEEEEEcCC------CEEEEEECCCCCEEEEe
Confidence 4566778888887654 68999998654 4543
No 129
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=38.56 E-value=3.2e+02 Score=27.41 Aligned_cols=150 Identities=14% Similarity=0.117 Sum_probs=79.3
Q ss_pred EeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCce
Q 035482 96 VGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKS 175 (378)
Q Consensus 96 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 175 (378)
++..+|.|.+.+. ....+.+.++..+....|-.... ....++++|+..+ +|+... ... ..
T Consensus 478 vD~~~~~LY~tD~-~~~~I~v~~ldG~~~~~l~~~~l----~~P~gIaVDp~~g--~LYwtD---~g~----------~~ 537 (791)
T 3m0c_C 478 VDWIHSNIYWTDS-VLGTVSVADTKGVKRKTLFRENG----SKPRAIVVDPVHG--FMYWTD---WGT----------PA 537 (791)
T ss_dssp EETTTTEEEEEET-TTTEEEEEETTSSSEEEEEECTT----CCEEEEEEETTTT--EEEEEE---CSS----------SC
T ss_pred eeecCCcEEEEec-CCCeEEEEeCCCCeEEEEEeCCC----CCcceEEEecCCC--CEEEec---CCC----------CC
Confidence 4445667776654 44678888887666555532111 2345677888643 222221 000 13
Q ss_pred EEEEEEcCCCCeEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEE-cCCCccCcceeEE
Q 035482 176 EVQILTLGSQEWRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVV-EKPDELHRIHYDL 251 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~l 251 (378)
.+++++.....=+.+... . .....++.+ +|.|||.... ...|.++|+....-..+ ..+... ....-|
T Consensus 538 ~I~~~~~dG~~~~~lv~~--~-l~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l-~~P~gl 608 (791)
T 3m0c_C 538 KIKKGGLNGVDIYSLVTE--N-IQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRL-AHPFSL 608 (791)
T ss_dssp EEEEEETTSCCEEEEECS--S-CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTT-SSEEEE
T ss_pred eEEEEecCCCceEEEEeC--C-CCCceEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCcc-CCCCEE
Confidence 566666654322222110 0 012234443 5899999765 57999999976544443 221111 123456
Q ss_pred EEeCCeEEEEEeCCCCceEEEEeeC
Q 035482 252 VNLGGCLSAAVPCSSGKEIWVMKEY 276 (378)
Q Consensus 252 ~~~~G~L~~v~~~~~~~~iW~l~~~ 276 (378)
...+++|+++.. ....|+.....
T Consensus 609 av~~~~lYwtD~--~~~~I~~~dk~ 631 (791)
T 3m0c_C 609 AVFEDKVFWTDI--INEAIFSANRL 631 (791)
T ss_dssp EEETTEEEEEET--TTTEEEEEETT
T ss_pred EEeCCEEEEEEC--CCCEEEEEeCC
Confidence 667888877653 22377777643
No 130
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=37.83 E-value=2.9e+02 Score=26.81 Aligned_cols=143 Identities=12% Similarity=0.121 Sum_probs=72.7
Q ss_pred eEEEEEEcCCC--CeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCc---eEeEEcCCCccCccee
Q 035482 175 SEVQILTLGSQ--EWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADE---QFRVVEKPDELHRIHY 249 (378)
Q Consensus 175 ~~~~Vyss~~~--~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e---~~~~i~lP~~~~~~~~ 249 (378)
..+.+++..++ .|+.+........ ......++.+|..... ......|+..|+++. .|+.+- |.... . .
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~--~~~~~~g~~l~~~t~~--~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~-~-~ 331 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADV--SLVDNKGSTLYLLTNR--DAPNRRLVTVDAANPGPAHWRDLI-PERQQ-V-L 331 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCE--EEEEEETTEEEEEECT--TCTTCEEEEEETTSCCGGGCEEEE-CCCSS-C-E
T ss_pred cEEEEEECCCCCCceEEEeCCCCceE--EEEeccCCEEEEEECC--CCCCCEEEEEeCCCCCccccEEEe-cCCCC-E-E
Confidence 46788888766 7876642211110 0112346788887654 223478999999863 466542 22111 1 1
Q ss_pred EEEEeCCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEe-eCCcE
Q 035482 250 DLVNLGGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLL-KNGEI 327 (378)
Q Consensus 250 ~l~~~~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~v 327 (378)
.+...++.|.+... .... .|++++-.+ .+. ..|.+ +.. ..+..+... +++.+
T Consensus 332 ~~s~~g~~lv~~~~-~~g~~~l~~~d~~g---~~~--~~l~~--p~~------------------~~~~~~~~~~d~~~l 385 (693)
T 3iuj_A 332 TVHSGSGYLFAEYM-VDATARVEQFDYEG---KRV--REVAL--PGL------------------GSVSGFNGKHDDPAL 385 (693)
T ss_dssp EEEEETTEEEEEEE-ETTEEEEEEECTTS---CEE--EEECC--SSS------------------SEEEECCCCTTCSCE
T ss_pred EEEEECCEEEEEEE-ECCeeEEEEEECCC---Cee--EEeec--CCC------------------ceEEeeecCCCCCEE
Confidence 33333445544433 3443 777775432 332 33432 110 011111112 23445
Q ss_pred EEEEcC----CeEEEEeCCCCcEEEEE
Q 035482 328 LLEYKC----RALVSYNPRNEMFKDLL 350 (378)
Q Consensus 328 l~~~~~----~~l~~yd~~t~~~~~v~ 350 (378)
++.... ..++.||+++++.+.+.
T Consensus 386 ~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 386 YFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp EEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred EEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 555443 67999999998877665
No 131
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=37.81 E-value=3.1e+02 Score=27.05 Aligned_cols=142 Identities=13% Similarity=0.107 Sum_probs=70.6
Q ss_pred EEEEEEcCCCCeEEeCcccc-ee-ecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcce-eE
Q 035482 176 EVQILTLGSQEWRSLGQVNY-HM-LEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIH-YD 250 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~~~~p~-~~-~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~-~~ 250 (378)
.+.+|+..++.|......+. .. .....+++. +|.+ |++.. ...|..||..+.++..+..+....... ..
T Consensus 470 Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~-----~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~ 543 (781)
T 3v9f_A 470 GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF-WIGTF-----GGGVGIYTPDMQLVRKFNQYEGFCSNTINQ 543 (781)
T ss_dssp EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE-EEEES-----SSCEEEECTTCCEEEEECTTTTCSCSCEEE
T ss_pred ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE-EEEEc-----CCCEEEEeCCCCeEEEccCCCCCCCCeeEE
Confidence 46788888888876542210 00 011112222 3554 55543 257999999999998876443221111 12
Q ss_pred EEE-eCCeEEEEEeCCCCceE-EEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEE
Q 035482 251 LVN-LGGCLSAAVPCSSGKEI-WVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEIL 328 (378)
Q Consensus 251 l~~-~~G~L~~v~~~~~~~~i-W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl 328 (378)
+.+ -+|.|.+.... .+ ...+.. ...+. .+.. ..++. ...+.-+....+|.+.
T Consensus 544 i~~d~~g~lWi~T~~----Glv~~~d~~--~~~~~---~~~~--~~gl~---------------~~~i~~i~~d~~g~lW 597 (781)
T 3v9f_A 544 IYRSSKGQMWLATGE----GLVCFPSAR--NFDYQ---VFQR--KEGLP---------------NTHIRAISEDKNGNIW 597 (781)
T ss_dssp EEECTTSCEEEEETT----EEEEESCTT--TCCCE---EECG--GGTCS---------------CCCCCEEEECSSSCEE
T ss_pred EEECCCCCEEEEECC----CceEEECCC--CCcEE---Eccc--cCCCC---------------CceEEEEEECCCCCEE
Confidence 222 24444444321 11 222110 12221 1111 01110 0122334445678888
Q ss_pred EEEcCCeEEEEeCCCCcEEEEE
Q 035482 329 LEYKCRALVSYNPRNEMFKDLL 350 (378)
Q Consensus 329 ~~~~~~~l~~yd~~t~~~~~v~ 350 (378)
+... .++..||+++++++...
T Consensus 598 ~~t~-~Gl~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 598 ASTN-TGISCYITSKKCFYTYD 618 (781)
T ss_dssp EECS-SCEEEEETTTTEEEEEC
T ss_pred EEcC-CceEEEECCCCceEEec
Confidence 8775 55999999999887764
No 132
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=37.67 E-value=2e+02 Score=24.79 Aligned_cols=181 Identities=14% Similarity=0.191 Sum_probs=81.1
Q ss_pred CCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEE
Q 035482 110 TKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRS 189 (378)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~ 189 (378)
....+.|||..++++.......... ......+.+.|.. .+-+. ... ...+.+++..++.+..
T Consensus 36 ~D~~i~iw~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~g-~~l~s--~s~--------------D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 36 GDRRIRIWGTEGDSWICKSVLSEGH-QRTVRKVAWSPCG-NYLAS--ASF--------------DATTCIWKKNQDDFEC 97 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEECSSC-SSCEEEEEECTTS-SEEEE--EET--------------TSCEEEEEECCC-EEE
T ss_pred CCCeEEEEEcCCCcceeeeeecccc-CCcEEEEEECCCC-CEEEE--EEC--------------CCcEEEEEccCCCeEE
Confidence 3467888888777643211110111 1234456677742 33222 111 1456778877776654
Q ss_pred eCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCc-eEeEEc-CCCccCcceeEEEEe--CCeEEEEEe
Q 035482 190 LGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADE-QFRVVE-KPDELHRIHYDLVNL--GGCLSAAVP 263 (378)
Q Consensus 190 ~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e-~~~~i~-lP~~~~~~~~~l~~~--~G~L~~v~~ 263 (378)
+..+... ...-..+.+ +|.+...+.. ...|..+|+.+. ....+. +.. +.....-+.+ +|.+.+...
T Consensus 98 ~~~~~~h-~~~v~~v~~sp~~~~l~s~s~-----D~~v~iwd~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 98 VTTLEGH-ENEVKSVAWAPSGNLLATCSR-----DKSVWVWEVDEEDEYECVSVLNS--HTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp EEEECCC-SSCEEEEEECTTSSEEEEEET-----TSCEEEEEECTTSCEEEEEEECC--CCSCEEEEEECSSSSCEEEEE
T ss_pred EEEccCC-CCCceEEEEeCCCCEEEEEEC-----CCeEEEEECCCCCCeEEEEEecC--cCCCeEEEEECCCCCEEEEEe
Confidence 3221100 000011111 3444333333 467888888664 222221 111 1111222222 566555554
Q ss_pred CCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE-cCCeEEEEeC
Q 035482 264 CSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY-KCRALVSYNP 341 (378)
Q Consensus 264 ~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~-~~~~l~~yd~ 341 (378)
.+....||.++. ..|....++.-. ...+.-+.+..+|..|+.. .++.+..||.
T Consensus 170 ~d~~i~~w~~~~----~~~~~~~~~~~h---------------------~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 170 YDDTVKLYREEE----DDWVCCATLEGH---------------------ESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp TTSCEEEEEEET----TEEEEEEEECCC---------------------SSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCcEEEEEecC----CCEEEEEEecCC---------------------CCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 433348898764 346555444321 0123445555666665554 3455666664
No 133
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=36.36 E-value=2e+02 Score=24.34 Aligned_cols=29 Identities=7% Similarity=0.110 Sum_probs=20.0
Q ss_pred EEEeeCCcEEEEEcCCeEEEEeCCCCcEEEE
Q 035482 319 LCLLKNGEILLEYKCRALVSYNPRNEMFKDL 349 (378)
Q Consensus 319 ~~~~~~g~vl~~~~~~~l~~yd~~t~~~~~v 349 (378)
+++..+|+ ++... ..+..+|+++++....
T Consensus 153 ~~~s~dg~-l~~~~-~~i~~~d~~~~~~~~~ 181 (349)
T 1jmx_B 153 MRAADDGS-LYVAG-PDIYKMDVKTGKYTVA 181 (349)
T ss_dssp EEECTTSC-EEEES-SSEEEECTTTCCEEEE
T ss_pred eeECCCCc-EEEcc-CcEEEEeCCCCceecc
Confidence 44666888 44444 4499999999886553
No 134
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=36.32 E-value=1.9e+02 Score=24.19 Aligned_cols=144 Identities=17% Similarity=0.164 Sum_probs=80.5
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCce-EeEEcCCCccCcceeEEEE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQ-FRVVEKPDELHRIHYDLVN 253 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~-~~~i~lP~~~~~~~~~l~~ 253 (378)
..+.+++..++.=...-.++.... ...-...++.+|-+... .+.+.+||.++-+ -..++.|.. ..-|..
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~f-geGi~~~~~~ly~ltw~-----~~~v~v~D~~tl~~~~ti~~~~~----Gwglt~ 112 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYF-GAGIVAWRDRLIQLTWR-----NHEGFVYDLATLTPRARFRYPGE----GWALTS 112 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCC-EEEEEEETTEEEEEESS-----SSEEEEEETTTTEEEEEEECSSC----CCEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCcc-eeEEEEeCCEEEEEEee-----CCEEEEEECCcCcEEEEEeCCCC----ceEEee
Confidence 678999999985443222222211 11224568899999876 6899999998744 456777641 123333
Q ss_pred eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE-c
Q 035482 254 LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY-K 332 (378)
Q Consensus 254 ~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~-~ 332 (378)
-+++|++.. ....|++++-. .=....+|.... ++ .++ ..+.-+.. .+|+++... .
T Consensus 113 dg~~L~vSd---gs~~l~~iDp~----t~~~~~~I~V~~-~g------~~~---------~~lNeLe~-~~G~lyanvw~ 168 (243)
T 3mbr_X 113 DDSHLYMSD---GTAVIRKLDPD----TLQQVGSIKVTA-GG------RPL---------DNLNELEW-VNGELLANVWL 168 (243)
T ss_dssp CSSCEEEEC---SSSEEEEECTT----TCCEEEEEECEE-TT------EEC---------CCEEEEEE-ETTEEEEEETT
T ss_pred CCCEEEEEC---CCCeEEEEeCC----CCeEEEEEEEcc-CC------ccc---------ccceeeEE-eCCEEEEEECC
Confidence 344565553 22378888632 123344554420 00 000 01111111 277877554 3
Q ss_pred CCeEEEEeCCCCcEEE-EEEe
Q 035482 333 CRALVSYNPRNEMFKD-LLLH 352 (378)
Q Consensus 333 ~~~l~~yd~~t~~~~~-v~~~ 352 (378)
...+...|++|+++.. +.+.
T Consensus 169 s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECG
T ss_pred CCeEEEEECCCCCEEEEEECC
Confidence 5789999999998755 4444
No 135
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=35.94 E-value=69 Score=23.39 Aligned_cols=43 Identities=21% Similarity=0.310 Sum_probs=30.7
Q ss_pred ceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEE
Q 035482 112 NRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKID 157 (378)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~ 157 (378)
-.+++.+|.|+.| +|..... .....+.+..|...+.|.|+...
T Consensus 11 A~V~~~d~~~~~W--~p~~~g~-~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 11 ATVMLYDDGNKRW--LPAGTGP-QAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp EECBEECTTTSSC--CBSSCSC-CCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCce--eECCCCC-CCccEEEEEEeCCCCEEEEEEEE
Confidence 4678899999996 4543211 12456788889888999999764
No 136
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=35.81 E-value=62 Score=24.41 Aligned_cols=29 Identities=17% Similarity=0.271 Sum_probs=22.7
Q ss_pred cEEEEEcCCeEEEEeCCCCcEEEEEEeCC
Q 035482 326 EILLEYKCRALVSYNPRNEMFKDLLLHGT 354 (378)
Q Consensus 326 ~vl~~~~~~~l~~yd~~t~~~~~v~~~~~ 354 (378)
+|+.......++.||..+++|++..++|.
T Consensus 30 ~Il~~a~~v~vY~f~~~~~~W~K~~iEG~ 58 (134)
T 2lyd_A 30 EIVDSSSHVAFYTFNSSQNEWEKTDVEGA 58 (134)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred HHHhhCCeEEEEEecCCcCceeEcCCcce
Confidence 35555555668889999999999988876
No 137
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=35.59 E-value=2.3e+02 Score=24.86 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=50.2
Q ss_pred CcEEEEEECCCce--EeEEcCCCccCcceeEEEEeCCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccc
Q 035482 222 SRLLISFDIADEQ--FRVVEKPDELHRIHYDLVNLGGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQ 298 (378)
Q Consensus 222 ~~~il~fD~~~e~--~~~i~lP~~~~~~~~~l~~~~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 298 (378)
.+.|..+|+.+.. ...+.... ......+...+|++.+... .++. .||.+..... ... ...+.. +.
T Consensus 312 dg~i~vwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~l~s~~-~d~~v~iw~~~~~~~--~~~-~~~~~~--~~---- 379 (420)
T 3vl1_A 312 NGMLAQWDLRSPECPVGEFLINE--GTPINNVYFAAGALFVSSG-FDTSIKLDIISDPES--ERP-AIEFET--PT---- 379 (420)
T ss_dssp TSEEEEEETTCTTSCSEEEEEST--TSCEEEEEEETTEEEEEET-TTEEEEEEEECCTTC--CSC-EECTTS--CE----
T ss_pred CCeEEEEEcCCCcCchhhhhccC--CCCceEEEeCCCCEEEEec-CCccEEEEeccCCCC--Ccc-ceeccC--cc----
Confidence 4789999998753 23333211 1112233344677555443 3444 9999876321 111 110100 00
Q ss_pred cccCccccccccccCceeEEEEEeeCCc----EEEEEcCCeEEEEeCCC
Q 035482 299 DLSQSFRDSKFFRNRSFVRVLCLLKNGE----ILLEYKCRALVSYNPRN 343 (378)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~----vl~~~~~~~l~~yd~~t 343 (378)
. .......+.-+++..+|. ++.....+.+..|+++.
T Consensus 380 ------~---~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 380 ------F---LVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ------E---ECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ------E---EccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 0 000112344455655666 66667778888898875
No 138
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=35.29 E-value=2.1e+02 Score=24.31 Aligned_cols=144 Identities=15% Similarity=0.179 Sum_probs=78.2
Q ss_pred eEEEEEEcCCCCeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCc-eEeEEcCCCccCcceeEEEE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADE-QFRVVEKPDELHRIHYDLVN 253 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e-~~~~i~lP~~~~~~~~~l~~ 253 (378)
..+.+++..++.=...-.++.... ...-...++.+|-+... .+.+.+||.++. .-..++.|.. ..-|..
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~F-geGit~~g~~ly~ltw~-----~~~v~v~D~~t~~~~~ti~~~~e----G~glt~ 134 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYF-GEGISDWKDKIVGLTWK-----NGLGFVWNIRNLRQVRSFNYDGE----GWGLTH 134 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCC-EEEEEEETTEEEEEESS-----SSEEEEEETTTCCEEEEEECSSC----CCCEEE
T ss_pred ceEEEEECCCCcEEEEEecCCccc-eeEEEEeCCEEEEEEee-----CCEEEEEECccCcEEEEEECCCC----ceEEec
Confidence 578899999985432222221111 11124567899998876 689999999874 4456777641 112222
Q ss_pred eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEE-c
Q 035482 254 LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEY-K 332 (378)
Q Consensus 254 ~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~-~ 332 (378)
-+++|++.. ....||+++-. .=....+|.... ++ .++ ..+.-+... +|+++... .
T Consensus 135 dg~~L~~Sd---Gs~~i~~iDp~----T~~v~~~I~V~~-~g------~~~---------~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 135 NDQYLIMSD---GTPVLRFLDPE----SLTPVRTITVTA-HG------EEL---------PELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp CSSCEEECC---SSSEEEEECTT----TCSEEEEEECEE-TT------EEC---------CCEEEEEEE-TTEEEEEETT
T ss_pred CCCEEEEEC---CCCeEEEEcCC----CCeEEEEEEecc-CC------ccc---------cccceeEEE-CCEEEEEEcc
Confidence 233454442 22378887642 122344554410 00 000 011112222 67777654 3
Q ss_pred CCeEEEEeCCCCcEEE-EEEe
Q 035482 333 CRALVSYNPRNEMFKD-LLLH 352 (378)
Q Consensus 333 ~~~l~~yd~~t~~~~~-v~~~ 352 (378)
...+...|++|+++.. +...
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECT
T ss_pred CCeEEEEECCCCcEEEEEECC
Confidence 6789999999998755 4443
No 139
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=35.19 E-value=2e+02 Score=24.19 Aligned_cols=199 Identities=11% Similarity=0.096 Sum_probs=94.5
Q ss_pred EEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEc
Q 035482 103 LCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTL 182 (378)
Q Consensus 103 l~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss 182 (378)
|++.+. ....++.++| +++...+.... ....++.+|+.. +++.... . ...+.+|+.
T Consensus 59 l~~~d~-~~~~i~~~~~-~g~~~~~~~~~-----~~~~gl~~d~dG---~l~v~~~---~-----------~~~v~~~~~ 114 (305)
T 3dr2_A 59 LVWSDL-VGRRVLGWRE-DGTVDVLLDAT-----AFTNGNAVDAQQ---RLVHCEH---G-----------RRAITRSDA 114 (305)
T ss_dssp EEEEET-TTTEEEEEET-TSCEEEEEESC-----SCEEEEEECTTS---CEEEEET---T-----------TTEEEEECT
T ss_pred EEEEEC-CCCEEEEEeC-CCCEEEEeCCC-----CccceeeECCCC---CEEEEEC---C-----------CCEEEEECC
Confidence 545443 4567888898 66654443211 234567777753 2332211 0 134666666
Q ss_pred CCCCeEEeCcc-cceeecCCCcEEE--CCeEEEEec----cC--------CCCCCcEEEEEECCCceEeEEcCCCccCcc
Q 035482 183 GSQEWRSLGQV-NYHMLEAPSQVLV--NGRLHWCTW----PR--------YRGPSRLLISFDIADEQFRVVEKPDELHRI 247 (378)
Q Consensus 183 ~~~~W~~~~~~-p~~~~~~~~~v~~--~G~lyw~~~----~~--------~~~~~~~il~fD~~~e~~~~i~lP~~~~~~ 247 (378)
. ++.+.+... ..........+.+ +|.+|+... .. .......|..+|.++.++..+. .. ...
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~--~~p 190 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DL--DHP 190 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EE--SSE
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cC--CCC
Confidence 4 555544311 1111111122333 688777421 00 0012368999999887776654 11 111
Q ss_pred eeEEEEeCCe-EEEEEeCCC---CceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEee
Q 035482 248 HYDLVNLGGC-LSAAVPCSS---GKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLK 323 (378)
Q Consensus 248 ~~~l~~~~G~-L~~v~~~~~---~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (378)
......-+|+ |+++..... ...||+.+-.+ .. ......+. ....+ ...-+.+..
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~-~~-l~~~~~~~-~~~~~-------------------~pdgi~~d~ 248 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD-GA-LHDRRHFA-SVPDG-------------------LPDGFCVDR 248 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEET-TE-EEEEEEEE-CCSSS-------------------CCCSEEECT
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC-CC-ccCCeEEE-ECCCC-------------------CCCeEEECC
Confidence 1111223666 444433211 13677765433 12 22222111 11100 011134556
Q ss_pred CCcEEEEEcCCeEEEEeCCCCcEEEEEEe
Q 035482 324 NGEILLEYKCRALVSYNPRNEMFKDLLLH 352 (378)
Q Consensus 324 ~g~vl~~~~~~~l~~yd~~t~~~~~v~~~ 352 (378)
+|.+++.. .+++..||++.+.+..+...
T Consensus 249 ~G~lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 249 GGWLWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp TSCEEECC-SSEEEEECTTSCEEEEEECS
T ss_pred CCCEEEec-CCcEEEECCCCCEEEEEECC
Confidence 88866655 46799999988877777644
No 140
>1q67_A Decapping protein involved in mRNA degradation- DCP1P; beta sandwich, transcription; 2.30A {Saccharomyces cerevisiae} SCOP: b.55.1.7
Probab=34.02 E-value=58 Score=26.63 Aligned_cols=29 Identities=14% Similarity=0.314 Sum_probs=23.7
Q ss_pred EEEEEcCCeEEEEeCCCCcEEEEEEeCCC
Q 035482 327 ILLEYKCRALVSYNPRNEMFKDLLLHGTP 355 (378)
Q Consensus 327 vl~~~~~~~l~~yd~~t~~~~~v~~~~~~ 355 (378)
|++......++.||.++++|++..++|..
T Consensus 37 IL~~t~hasvYkfd~~~~eW~K~~~eG~L 65 (231)
T 1q67_A 37 LLFHTPHASLYKWDFKKDEWNKLEYQGVL 65 (231)
T ss_dssp EEEEEEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred HHhcCCeEEEEEecCCCCceEecCcEEEE
Confidence 55555556789999999999999988873
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=33.92 E-value=2.1e+02 Score=24.03 Aligned_cols=107 Identities=8% Similarity=-0.115 Sum_probs=55.4
Q ss_pred CeEEEEeccCCCCCCcEEEEEECCCceEeE-EcCCCccCcceeEEEE-eCCeEEEEEeCCCCceEEEEeeCCCCCceeeE
Q 035482 208 GRLHWCTWPRYRGPSRLLISFDIADEQFRV-VEKPDELHRIHYDLVN-LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKE 285 (378)
Q Consensus 208 G~lyw~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~l~~-~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~ 285 (378)
+.+|..... ...|..||+++.+... +..+. ....+.. -+|+..++...... .||+.+-.. ..- ..
T Consensus 10 ~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~~~-~i~~~d~~~--~~~-~~ 76 (331)
T 3u4y_A 10 NFGIVVEQH-----LRRISFFSTDTLEILNQITLGY----DFVDTAITSDCSNVVVTSDFCQ-TLVQIETQL--EPP-KV 76 (331)
T ss_dssp CEEEEEEGG-----GTEEEEEETTTCCEEEEEECCC----CEEEEEECSSSCEEEEEESTTC-EEEEEECSS--SSC-EE
T ss_pred CEEEEEecC-----CCeEEEEeCcccceeeeEEccC----CcceEEEcCCCCEEEEEeCCCC-eEEEEECCC--Cce-eE
Confidence 455665554 5799999999877643 45442 1123332 26764444433222 555554322 111 12
Q ss_pred EEEccCCCCCccccccCccccccccccCceeEE-EEEeeCCcEEEEEcCC----eEEEEeCCCCcEEEE
Q 035482 286 YNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRV-LCLLKNGEILLEYKCR----ALVSYNPRNEMFKDL 349 (378)
Q Consensus 286 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~vl~~~~~~----~l~~yd~~t~~~~~v 349 (378)
..+... ....- +.+..+|+.++..... .+..||+++++....
T Consensus 77 ~~~~~~----------------------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 77 VAIQEG----------------------QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp EEEEEC----------------------SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred EecccC----------------------CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE
Confidence 222210 00112 4455677766654433 788999988876553
No 142
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=33.61 E-value=1e+02 Score=24.20 Aligned_cols=40 Identities=25% Similarity=0.566 Sum_probs=28.9
Q ss_pred ceEEEEccccc-ceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEE
Q 035482 112 NRLYVYNPFTR-NYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKID 157 (378)
Q Consensus 112 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~ 157 (378)
-.+++.||.|+ .|+..-.. ...+.+.+|...+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~------~~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKH------AVTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSS------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCC------CeEEEEEEcCCCCEEEEEEcc
Confidence 46889999997 78643332 235667789888899999864
No 143
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=33.35 E-value=2.5e+02 Score=24.63 Aligned_cols=152 Identities=9% Similarity=0.046 Sum_probs=67.3
Q ss_pred eeCceEEEeecCCCceEEEEccccc-cee-eCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCce
Q 035482 98 SCKGLLCLCDSSTKNRLYVYNPFTR-NYV-ELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKS 175 (378)
Q Consensus 98 s~~GLl~~~~~~~~~~~~V~NP~T~-~~~-~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 175 (378)
+.+++.++......+.+.|||..+. +.. .++... .......++.+.+..+.+-+.. . . .-
T Consensus 43 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~--~h~~~V~~~~~~p~~~~~l~s~--s---~-----------dg 104 (402)
T 2aq5_A 43 NPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVC--GHTAPVLDIAWCPHNDNVIASG--S---E-----------DC 104 (402)
T ss_dssp CSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBC--CCSSCEEEEEECTTCTTEEEEE--E---T-----------TS
T ss_pred CCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEe--cCCCCEEEEEeCCCCCCEEEEE--e---C-----------CC
Confidence 3344444433334577888887443 221 112111 1123456677777434433332 1 1 14
Q ss_pred EEEEEEcCCCCeEEeCcccc-eeecCC---CcEEE--CC-eEEEEeccCCCCCCcEEEEEECCCceEeE-EcCCCccCcc
Q 035482 176 EVQILTLGSQEWRSLGQVNY-HMLEAP---SQVLV--NG-RLHWCTWPRYRGPSRLLISFDIADEQFRV-VEKPDELHRI 247 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~~~~p~-~~~~~~---~~v~~--~G-~lyw~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~ 247 (378)
.+.||+..++........+. ...... ..+.+ +| .+...+.. .+.|..+|+.+.+... +.... ...
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~--~~~ 177 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC-----DNVILVWDVGTGAAVLTLGPDV--HPD 177 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET-----TSCEEEEETTTTEEEEEECTTT--CCS
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC-----CCEEEEEECCCCCccEEEecCC--CCC
Confidence 68899988875421110010 011011 11122 23 23333332 4689999998875533 21111 111
Q ss_pred eeEEEEe--CCeEEEEEeCCCCceEEEEe
Q 035482 248 HYDLVNL--GGCLSAAVPCSSGKEIWVMK 274 (378)
Q Consensus 248 ~~~l~~~--~G~L~~v~~~~~~~~iW~l~ 274 (378)
...-+.+ +|.+.++...+....||.++
T Consensus 178 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 178 TIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 2222222 56655554432223777654
No 144
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=32.98 E-value=3.1e+02 Score=25.72 Aligned_cols=105 Identities=12% Similarity=0.076 Sum_probs=58.9
Q ss_pred CcEEEEEECCCceEeE-EcCCCccC-cceeEEEEeC-CeEEEEEeCCCCc-eEEEEeeCC-CCCceeeEEEEccCCCCCc
Q 035482 222 SRLLISFDIADEQFRV-VEKPDELH-RIHYDLVNLG-GCLSAAVPCSSGK-EIWVMKEYD-VKESWIKEYNIGIHVPRGL 296 (378)
Q Consensus 222 ~~~il~fD~~~e~~~~-i~lP~~~~-~~~~~l~~~~-G~L~~v~~~~~~~-~iW~l~~~~-~~~~W~~~~~i~~~~~~~~ 296 (378)
.+.|.++|+.+.+... ++.....+ .....+..-+ |.+++.....+.. .+|-++..+ .+..|..+.+|...-.
T Consensus 345 ~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~--- 421 (543)
T 1nir_A 345 SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGG--- 421 (543)
T ss_dssp GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS---
T ss_pred CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCC---
Confidence 4689999999876643 44321101 1112233334 5554443323344 888776422 1235988888865210
Q ss_pred cccccCccccccccccCceeEEEEEeeCCcEEEEEc--------CCeEEEEeCCCCcEE
Q 035482 297 EQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK--------CRALVSYNPRNEMFK 347 (378)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~--------~~~l~~yd~~t~~~~ 347 (378)
....+.+..+|..+.+.. +..+.+||.++.+..
T Consensus 422 ------------------~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 422 ------------------GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp ------------------CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred ------------------CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 112344566787777753 457999999988754
No 145
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=32.67 E-value=2.3e+02 Score=24.01 Aligned_cols=109 Identities=12% Similarity=0.015 Sum_probs=60.6
Q ss_pred CeEEEEeccCCCCCCcEEEEEECCCceE-eEEcCCCccCcceeEEEEeCCeEEEEEeCCCCceEEEEeeCCCCCceeeEE
Q 035482 208 GRLHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPDELHRIHYDLVNLGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEY 286 (378)
Q Consensus 208 G~lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~l~~~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~ 286 (378)
|.+|-.... .....|.++|+.+.+- ..+++|.... ..-+...+++|+++.. ....+++.+. ..-....
T Consensus 32 g~Lyvstg~---~~~s~v~~iD~~tg~v~~~i~l~~~~f--geGi~~~g~~lyv~t~--~~~~v~viD~----~t~~v~~ 100 (266)
T 2iwa_A 32 DTLFESTGL---YGRSSVRQVALQTGKVENIHKMDDSYF--GEGLTLLNEKLYQVVW--LKNIGFIYDR----RTLSNIK 100 (266)
T ss_dssp TEEEEEECS---TTTCEEEEEETTTCCEEEEEECCTTCC--EEEEEEETTEEEEEET--TCSEEEEEET----TTTEEEE
T ss_pred CeEEEECCC---CCCCEEEEEECCCCCEEEEEecCCCcc--eEEEEEeCCEEEEEEe--cCCEEEEEEC----CCCcEEE
Confidence 677776542 1247899999987654 5567765211 1123334567777653 2236777653 2344555
Q ss_pred EEccCCCCCccccccCccccccccccCceeEEEEEeeCCc-EEEEEcCCeEEEEeCCCCcEE-EEE
Q 035482 287 NIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGE-ILLEYKCRALVSYNPRNEMFK-DLL 350 (378)
Q Consensus 287 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-vl~~~~~~~l~~yd~~t~~~~-~v~ 350 (378)
+|....+++ .++..+|+ +++....+.+...|++|.+.. .|.
T Consensus 101 ~i~~g~~~g-----------------------~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 101 NFTHQMKDG-----------------------WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp EEECCSSSC-----------------------CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEECCCCCe-----------------------EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence 665411211 12333454 444445678999999997644 444
No 146
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=32.24 E-value=2.6e+02 Score=24.54 Aligned_cols=35 Identities=9% Similarity=0.052 Sum_probs=24.2
Q ss_pred eEEEEEeeCCcEEEEE---cCCeEEEEeCCCCcEEEEE
Q 035482 316 VRVLCLLKNGEILLEY---KCRALVSYNPRNEMFKDLL 350 (378)
Q Consensus 316 ~~~~~~~~~g~vl~~~---~~~~l~~yd~~t~~~~~v~ 350 (378)
+.-+.+..+|..++.. .++.+..||.++++...+.
T Consensus 306 v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 306 VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp EEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE
T ss_pred EEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE
Confidence 3445666677777664 3678999999988766653
No 147
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=31.73 E-value=2.5e+02 Score=24.13 Aligned_cols=114 Identities=15% Similarity=0.078 Sum_probs=63.0
Q ss_pred CCe-EEEEeccCCCCCCcEEEEEECCCceEeEEc----CCCccCcceeEEEE-eCCeEEEEEeCC-CCc-eEEEEeeCCC
Q 035482 207 NGR-LHWCTWPRYRGPSRLLISFDIADEQFRVVE----KPDELHRIHYDLVN-LGGCLSAAVPCS-SGK-EIWVMKEYDV 278 (378)
Q Consensus 207 ~G~-lyw~~~~~~~~~~~~il~fD~~~e~~~~i~----lP~~~~~~~~~l~~-~~G~L~~v~~~~-~~~-~iW~l~~~~~ 278 (378)
+|. +|..... ...|..||+.+.++..+. .|.... ....+.. -+|+..++.... ... .||.++..
T Consensus 221 dg~~l~v~~~~-----~~~v~v~~~~~g~~~~~~~~~~~~~~~~-~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~-- 292 (361)
T 3scy_A 221 DGKFAYLINEI-----GGTVIAFRYADGMLDEIQTVAADTVNAQ-GSGDIHLSPDGKYLYASNRLKADGVAIFKVDET-- 292 (361)
T ss_dssp TSSEEEEEETT-----TCEEEEEEEETTEEEEEEEEESCSSCCC-CEEEEEECTTSSEEEEEECSSSCEEEEEEECTT--
T ss_pred CCCEEEEEcCC-----CCeEEEEEecCCceEEeEEEecCCCCCC-CcccEEECCCCCEEEEECCCCCCEEEEEEEcCC--
Confidence 565 5554433 468999999877765442 222111 1122322 378765555544 344 88888632
Q ss_pred CCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEEEEc--CCeEEE--EeCCCCcEEEEE
Q 035482 279 KESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK--CRALVS--YNPRNEMFKDLL 350 (378)
Q Consensus 279 ~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~--~~~l~~--yd~~t~~~~~v~ 350 (378)
.+.+.....+... ....-+++..+|+.++... ++.+.. +|+++++++.+.
T Consensus 293 ~g~~~~~~~~~~g----------------------~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 293 NGTLTKVGYQLTG----------------------IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp TCCEEEEEEEECS----------------------SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred CCcEEEeeEecCC----------------------CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 2345555444320 1123356677888766654 344544 688899888764
No 148
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=31.66 E-value=26 Score=20.86 Aligned_cols=16 Identities=38% Similarity=0.490 Sum_probs=10.8
Q ss_pred CCCcHHHHHHHhccCC
Q 035482 2 EYLPQEIVLDILSRLP 17 (378)
Q Consensus 2 ~~LP~Dll~eIL~rLP 17 (378)
..||.|+-+|||+--.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 4577777777776543
No 149
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=31.63 E-value=3e+02 Score=26.25 Aligned_cols=80 Identities=10% Similarity=-0.023 Sum_probs=47.5
Q ss_pred eEEEEEEcCCC--CeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceE-eEEcCCCccCcceeEE
Q 035482 175 SEVQILTLGSQ--EWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQF-RVVEKPDELHRIHYDL 251 (378)
Q Consensus 175 ~~~~Vyss~~~--~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~l 251 (378)
-.+..++..+| .|+.....+. .....+..+|.+|.-.. ...|.+||.++.+- -..++|...... ...
T Consensus 466 G~l~A~D~~tG~~~W~~~~~~~~---~~g~~~tagglvf~g~~------dg~l~A~D~~tG~~lW~~~~~~g~~a~-P~~ 535 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEHLPL---WAGVLATAGNLVFTGTG------DGYFKAFDAKSGKELWKFQTGSGIVSP-PIT 535 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC---CSCCEEETTTEEEEECT------TSEEEEEETTTCCEEEEEECSSCCCSC-CEE
T ss_pred ceEEEEECCCCCEEEEecCCCCC---cccceEeCCCEEEEECC------CCcEEEEECCCCCEEEEecCCCCcccC-ceE
Confidence 45677888887 6886543221 12333455788877433 47999999976433 235666532221 222
Q ss_pred EEeCCeEEEEEeC
Q 035482 252 VNLGGCLSAAVPC 264 (378)
Q Consensus 252 ~~~~G~L~~v~~~ 264 (378)
.+.+|+++++...
T Consensus 536 y~~~G~qYv~~~~ 548 (582)
T 1flg_A 536 WEQDGEQYLGVTV 548 (582)
T ss_dssp EEETTEEEEEEEE
T ss_pred EEECCEEEEEEEc
Confidence 2578999888653
No 150
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.52 E-value=43 Score=22.23 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=15.6
Q ss_pred EEEEEcCCeEEEEeCCCCc
Q 035482 327 ILLEYKCRALVSYNPRNEM 345 (378)
Q Consensus 327 vl~~~~~~~l~~yd~~t~~ 345 (378)
.+....+++.|+||..|++
T Consensus 23 ~~v~T~dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 23 CVVWTGDERVFFYNPTTRL 41 (73)
T ss_dssp EEEEESSSCEEEEETTTTE
T ss_pred EEEECCCCCEEEecCcccc
Confidence 4555678999999999986
No 151
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=30.49 E-value=3e+02 Score=26.47 Aligned_cols=78 Identities=9% Similarity=0.086 Sum_probs=46.3
Q ss_pred eEEEEEEcCCC--CeEEeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCce--EeEEcCCCccCcceeE
Q 035482 175 SEVQILTLGSQ--EWRSLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQ--FRVVEKPDELHRIHYD 250 (378)
Q Consensus 175 ~~~~Vyss~~~--~W~~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~--~~~i~lP~~~~~~~~~ 250 (378)
-.+..++..+| .|+.....|. .....+..+|.+|.-.. ...|.+||.++.+ |+ .++|..... ...
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~~---~~g~~~tagg~vf~gt~------dg~l~A~D~~tG~~lW~-~~l~~g~~~-~P~ 521 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFAV---WGGTMATAGDLVFYGTL------DGYLKARDSDTGDLLWK-FKIPSGAIG-YPM 521 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC---CSBCEEETTTEEEEECT------TSEEEEEETTTCCEEEE-EECSSCCCS-CCE
T ss_pred CeEEEEECCCCCEEeEecCCCCc---cCcceEecCCEEEEECC------CCeEEEEECCCCCEEEE-eeCCCCcEe-ccE
Confidence 45677788777 6886433221 11223345777777433 4799999998743 43 467763222 223
Q ss_pred EEEeCCeEEEEEe
Q 035482 251 LVNLGGCLSAAVP 263 (378)
Q Consensus 251 l~~~~G~L~~v~~ 263 (378)
.-+.+|+++++..
T Consensus 522 ~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 522 TYTHKGTQYVAIY 534 (599)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEeCCEEEEEEE
Confidence 3357899888754
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=28.79 E-value=2.6e+02 Score=23.54 Aligned_cols=200 Identities=10% Similarity=-0.005 Sum_probs=96.0
Q ss_pred eCceEEEeecCCCceEEEEcccccceee-CCCCC--C--CCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCC
Q 035482 99 CKGLLCLCDSSTKNRLYVYNPFTRNYVE-LPKST--E--FQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYG 173 (378)
Q Consensus 99 ~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~--~--~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 173 (378)
.+..+.+... ....+.++|+.|++... ++... . ........++.+++..+ + ++... ...
T Consensus 99 dg~~l~v~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~-l~~~~-~~~------------ 162 (353)
T 3vgz_A 99 TTQTLWFGNT-VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN-T-VYISG-IGK------------ 162 (353)
T ss_dssp TTTEEEEEET-TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-E-EEEEE-ESS------------
T ss_pred CCCEEEEEec-CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC-E-EEEEe-cCC------------
Confidence 3344555543 45689999999988643 33311 1 01112345677787643 3 22221 111
Q ss_pred ceEEEEEEcCCCCeE-EeCcccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCCceEe-EEcCCCcc-CcceeE
Q 035482 174 KSEVQILTLGSQEWR-SLGQVNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIADEQFR-VVEKPDEL-HRIHYD 250 (378)
Q Consensus 174 ~~~~~Vyss~~~~W~-~~~~~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~-~~~~~~ 250 (378)
...+.+++..++.=. .+...... ...-.+.-+|...+.... ...|..+|+.+.+.. .++.+... ......
T Consensus 163 ~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 235 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKTAIQNTGKM--STGLALDSEGKRLYTTNA-----DGELITIDTADNKILSRKKLLDDGKEHFFIN 235 (353)
T ss_dssp SCEEEEEETTTTEEEEEECCCCTT--CCCCEEETTTTEEEEECT-----TSEEEEEETTTTEEEEEEECCCSSSCCCEEE
T ss_pred CceEEEEcCCCCceEEEecCCCCc--cceEEECCCCCEEEEEcC-----CCeEEEEECCCCeEEEEEEcCCCCCCcccce
Confidence 146888888876322 11101000 011112225554333333 368999999887654 34553311 111112
Q ss_pred EEE-eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEEE
Q 035482 251 LVN-LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEILL 329 (378)
Q Consensus 251 l~~-~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~ 329 (378)
+.. -+|+..++.... ...|++.+-. .......+....+ .-+.+..+|+.++
T Consensus 236 ~~~s~dg~~l~~~~~~-~~~v~~~d~~----~~~~~~~~~~~~~-----------------------~~~~~s~dg~~l~ 287 (353)
T 3vgz_A 236 ISLDTARQRAFITDSK-AAEVLVVDTR----NGNILAKVAAPES-----------------------LAVLFNPARNEAY 287 (353)
T ss_dssp EEEETTTTEEEEEESS-SSEEEEEETT----TCCEEEEEECSSC-----------------------CCEEEETTTTEEE
T ss_pred EEECCCCCEEEEEeCC-CCEEEEEECC----CCcEEEEEEcCCC-----------------------ceEEECCCCCEEE
Confidence 322 256544443322 2245554431 1223333332111 1144556777544
Q ss_pred E-E-cCCeEEEEeCCCCcEEEE
Q 035482 330 E-Y-KCRALVSYNPRNEMFKDL 349 (378)
Q Consensus 330 ~-~-~~~~l~~yd~~t~~~~~v 349 (378)
+ . .++.+..||.++++....
T Consensus 288 v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 288 VTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCeEEEEECCCCeEEEE
Confidence 4 3 357899999999886553
No 153
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=28.34 E-value=4.2e+02 Score=25.77 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=31.0
Q ss_pred CceEEEEcccccceee-CCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeE
Q 035482 111 KNRLYVYNPFTRNYVE-LPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWR 188 (378)
Q Consensus 111 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~ 188 (378)
.+.+.|||..|++... +.... ....++.+.+.. .+ +++... ...+.||+..++...
T Consensus 34 ~g~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~s~~~-~~--l~~~~~--------------dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQVTE-----TPVRAGKFIARK-NW--IIVGSD--------------DFRIRVFNYNTGEKV 90 (814)
T ss_dssp TSEEEEEETTTTEEEEEEECCS-----SCEEEEEEEGGG-TE--EEEEET--------------TSEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCceEEEEecCC-----CcEEEEEEeCCC-CE--EEEEeC--------------CCeEEEEECCCCcEE
Confidence 4678888888876543 22111 234456666642 22 222211 156889998888653
No 154
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=28.16 E-value=91 Score=27.67 Aligned_cols=55 Identities=2% Similarity=0.016 Sum_probs=33.6
Q ss_pred eEEEEEEcCCCCeEEeCcccce-----eecCCCcEE-------ECCeEEEEeccCCCCCCcEEEEEECCCceE
Q 035482 175 SEVQILTLGSQEWRSLGQVNYH-----MLEAPSQVL-------VNGRLHWCTWPRYRGPSRLLISFDIADEQF 235 (378)
Q Consensus 175 ~~~~Vyss~~~~W~~~~~~p~~-----~~~~~~~v~-------~~G~lyw~~~~~~~~~~~~il~fD~~~e~~ 235 (378)
-.+..|+..+|.|+-....+.. ......+|. .+|.+|.-... ..+.++|+.+.+-
T Consensus 67 G~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~------g~l~ald~~tG~~ 133 (339)
T 2be1_A 67 GNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMR------TIMYTINMLNGEI 133 (339)
T ss_dssp TEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEE------EEEEEEETTTCCE
T ss_pred CEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecC------CEEEEEECCCCcE
Confidence 3567788888866532222211 112344555 78999988766 7999999987544
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=27.62 E-value=2.9e+02 Score=23.64 Aligned_cols=94 Identities=11% Similarity=0.113 Sum_probs=44.0
Q ss_pred EEEEEE--cCCCCeEEeCcccceeecCCCcEEE--CCe-EEEEeccCCCCCCcEEEEEECCC--ceEeEEc-CCCccCcc
Q 035482 176 EVQILT--LGSQEWRSLGQVNYHMLEAPSQVLV--NGR-LHWCTWPRYRGPSRLLISFDIAD--EQFRVVE-KPDELHRI 247 (378)
Q Consensus 176 ~~~Vys--s~~~~W~~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~il~fD~~~--e~~~~i~-lP~~~~~~ 247 (378)
.+.+|. ..++..+..... .......+.+ +|. +|..... ......|.+|++.. .+...+. .+.. ...
T Consensus 28 ~i~~~~~d~~~g~~~~~~~~---~~~~p~~l~~spdg~~l~~~~~~--~~~~~~v~~~~~~~~~g~~~~~~~~~~~-~~~ 101 (361)
T 3scy_A 28 GIYTFRFNEETGESLPLSDA---EVANPSYLIPSADGKFVYSVNEF--SKDQAAVSAFAFDKEKGTLHLLNTQKTM-GAD 101 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEE---ECSCCCSEEECTTSSEEEEEECC--SSTTCEEEEEEEETTTTEEEEEEEEECS-SSC
T ss_pred CEEEEEEeCCCCCEEEeecc---cCCCCceEEECCCCCEEEEEEcc--CCCCCcEEEEEEeCCCCcEEEeeEeccC-CCC
Confidence 445554 466777655432 1111222222 354 6655542 11235666665544 5665552 2221 112
Q ss_pred eeEEEEeCCeEEEEEeCCCCc-eEEEEeeC
Q 035482 248 HYDLVNLGGCLSAAVPCSSGK-EIWVMKEY 276 (378)
Q Consensus 248 ~~~l~~~~G~L~~v~~~~~~~-~iW~l~~~ 276 (378)
...+.. +|+..++....... .+|.++..
T Consensus 102 p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~ 130 (361)
T 3scy_A 102 PCYLTT-NGKNIVTANYSGGSITVFPIGQD 130 (361)
T ss_dssp EEEEEE-CSSEEEEEETTTTEEEEEEBCTT
T ss_pred cEEEEE-CCCEEEEEECCCCEEEEEEeCCC
Confidence 233433 88766655544444 77877643
No 156
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=27.47 E-value=4.3e+02 Score=25.59 Aligned_cols=64 Identities=11% Similarity=0.102 Sum_probs=39.9
Q ss_pred eEEEEEEcCCC--CeEEeCc-ccceeecCCCcEEECCeEEEEeccCCCCCCcEEEEEECCC--ceEeEE
Q 035482 175 SEVQILTLGSQ--EWRSLGQ-VNYHMLEAPSQVLVNGRLHWCTWPRYRGPSRLLISFDIAD--EQFRVV 238 (378)
Q Consensus 175 ~~~~Vyss~~~--~W~~~~~-~p~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~il~fD~~~--e~~~~i 238 (378)
..+..++..+| .|+.... .+........++..+|.+|.-....+......|.+||.+| ..|+.-
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 45777888888 7986542 1111223456778899998765432122347899999976 456553
No 157
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=27.30 E-value=4.5e+02 Score=25.71 Aligned_cols=149 Identities=14% Similarity=0.116 Sum_probs=71.5
Q ss_pred EeeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCce
Q 035482 96 VGSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKS 175 (378)
Q Consensus 96 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 175 (378)
++..+|.|.+.+. ....+.++++.++....+-.... ...-++++|+..+. ++... ... ..
T Consensus 460 vD~~~g~LY~tD~-~~~~I~v~d~dg~~~~~l~~~~~----~~P~giavDp~~g~--ly~td---~~~----------~~ 519 (699)
T 1n7d_A 460 VDWIHSNIYWTDS-VLGTVSVADTKGVKRKTLFREQG----SKPRAIVVDPVHGF--MYWTD---WGT----------PA 519 (699)
T ss_dssp CCCSSSBCEECCT-TTSCEEEEBSSSCCEEEECCCSS----CCCCCEECCSSSSC--CEECC---CSS----------SC
T ss_pred EEeeCCcEEEEec-cCCeEEEEecCCCceEEEEeCCC----CCcceEEEccCCCc--EEEcc---cCC----------CC
Confidence 3445666666653 35678999988776555422111 11124566765332 11110 000 02
Q ss_pred EEEEEEcCCCCeEEeCcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEE-cCCCccCcceeEE
Q 035482 176 EVQILTLGSQEWRSLGQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVV-EKPDELHRIHYDL 251 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~l 251 (378)
.+++++.....-+.+... . .....++.+ +|.|||.... ...|.+||+....-+.+ ..+... ....-|
T Consensus 520 ~I~~~~~dG~~~~~l~~~--~-l~~PnGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~-~~P~gl 590 (699)
T 1n7d_A 520 KIKKGGLNGVDIYSLVTE--N-IQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRL-AHPFSL 590 (699)
T ss_dssp CEEBCCSSSCCCCEESCS--S-CSSCCCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSC-SSCCCC
T ss_pred eEEEEeCCCCCeeEEEeC--C-CCCccEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcC-CCceEe
Confidence 344444433222222110 0 123455665 4899998865 57899999976444443 222111 111233
Q ss_pred EEeCCeEEEEEeCCCCceEEEEee
Q 035482 252 VNLGGCLSAAVPCSSGKEIWVMKE 275 (378)
Q Consensus 252 ~~~~G~L~~v~~~~~~~~iW~l~~ 275 (378)
...++.|+++.. ....|++...
T Consensus 591 avd~~~lywtd~--~~~~V~~~d~ 612 (699)
T 1n7d_A 591 AVFEDKVFWTDI--INEAIFSANR 612 (699)
T ss_dssp EEETTEEEEECS--TTTCEEEEET
T ss_pred EEECCEEEEEeC--CCCeEEEEEc
Confidence 445566665542 2236766654
No 158
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=27.14 E-value=4.3e+02 Score=25.47 Aligned_cols=135 Identities=12% Similarity=0.084 Sum_probs=69.7
Q ss_pred ceEEEEccccccee-eCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEe
Q 035482 112 NRLYVYNPFTRNYV-ELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSL 190 (378)
Q Consensus 112 ~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~ 190 (378)
..+...+..+.+.. .+|-.. .....|+.||+..+ +|+.... . ...+..++........+
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~----~~~~~~l~~d~~~~--~lywtD~---~-----------~~~I~r~~~~g~~~~~v 74 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTG----VKEASALDFDVTDN--RIYWTDI---S-----------LKTISRAFMNGSALEHV 74 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCS----CSCEEEEEEETTTT--EEEEEET---T-----------TTEEEEEETTSCSCEEE
T ss_pred CcEEEEECCCCCcceEEEcCC----CCceEEEEEECCCC--EEEEEEC---C-----------CCeEEEEECCCCCcEEE
Confidence 56666766665433 344322 13567889998654 3333211 1 13455666655444433
Q ss_pred CcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEE--eCCeEEEEEeCC
Q 035482 191 GQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVN--LGGCLSAAVPCS 265 (378)
Q Consensus 191 ~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~--~~G~L~~v~~~~ 265 (378)
.... . ....++.+ +|.|||.... ...|.++|++...-..+-. .... ....++. .+|.|+.... .
T Consensus 75 ~~~g--~-~~P~GlAvD~~~~~LY~tD~~-----~~~I~v~~~dG~~~~~l~~-~~l~-~P~~iavdp~~G~lY~tD~-g 143 (628)
T 4a0p_A 75 VEFG--L-DYPEGMAVDWLGKNLYWADTG-----TNRIEVSKLDGQHRQVLVW-KDLD-SPRALALDPAEGFMYWTEW-G 143 (628)
T ss_dssp ECSS--C-SCCCEEEEETTTTEEEEEETT-----TTEEEEEETTSTTCEEEEC-SSCC-CEEEEEEETTTTEEEEEEC-S
T ss_pred EeCC--C-CCcceEEEEeCCCEEEEEECC-----CCEEEEEecCCCcEEEEEe-CCCC-CcccEEEccCCCeEEEeCC-C
Confidence 2111 0 12334444 5999998765 5799999997654333321 1111 1123333 2577766543 2
Q ss_pred CCceEEEEeeCC
Q 035482 266 SGKEIWVMKEYD 277 (378)
Q Consensus 266 ~~~~iW~l~~~~ 277 (378)
....|+...-.|
T Consensus 144 ~~~~I~r~~~dG 155 (628)
T 4a0p_A 144 GKPKIDRAAMDG 155 (628)
T ss_dssp SSCEEEEEETTS
T ss_pred CCCEEEEEeCCC
Confidence 223777766544
No 159
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=26.91 E-value=3e+02 Score=23.64 Aligned_cols=33 Identities=12% Similarity=-0.059 Sum_probs=22.1
Q ss_pred eeEEEEEeeCCcEEEEEc-CCeEEEEeCCCCcEE
Q 035482 315 FVRVLCLLKNGEILLEYK-CRALVSYNPRNEMFK 347 (378)
Q Consensus 315 ~~~~~~~~~~g~vl~~~~-~~~l~~yd~~t~~~~ 347 (378)
.+.-+++..+|..++... ++.+..||+++++..
T Consensus 336 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 336 TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 455677777888777654 678999999988643
No 160
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=26.70 E-value=3.4e+02 Score=24.08 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=35.1
Q ss_pred CceEEEEcccc--cceeeCCCCC--CCCCccEEEEEEEeCC-CCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCC
Q 035482 111 KNRLYVYNPFT--RNYVELPKST--EFQTQDVVFGFGFHPT-TNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQ 185 (378)
Q Consensus 111 ~~~~~V~NP~T--~~~~~LP~~~--~~~~~~~~~~l~~d~~-~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~ 185 (378)
...+++++|.+ .+..+|.-.. .........|+.+.+. .+.-.++++.+.. . ...+++|....+
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~-~-----------~s~ielf~~d~~ 149 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG-S-----------SSTVEVFKFQEE 149 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST-T-----------CCEEEEEEEETT
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC-C-----------CCeEEEEEEECC
Confidence 56799999983 4555554322 1112246667776553 3456666665431 1 156777776654
No 161
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=26.32 E-value=3e+02 Score=23.41 Aligned_cols=148 Identities=9% Similarity=0.069 Sum_probs=71.6
Q ss_pred EEeeeCceEEEeecCCCceEEEEcccccceee-CCCCCCCCCccEEEEEEEeCC-CCCeEEEEEEEEecCCCCcccccCC
Q 035482 95 VVGSCKGLLCLCDSSTKNRLYVYNPFTRNYVE-LPKSTEFQTQDVVFGFGFHPT-TNKYKVVKIDYCRKTHGNHRYYRGY 172 (378)
Q Consensus 95 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~-~~~ykvv~~~~~~~~~~~~~~~~~~ 172 (378)
+.++.+|-+.+-+ ....+.++|..+++... +.... ......+.++|. .+.+-+.. . .
T Consensus 89 ~s~s~D~~i~~w~--~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~-s----~---------- 147 (343)
T 3lrv_A 89 ISRGPCNRLLLLY--PGNQITILDSKTNKVLREIEVDS----ANEIIYMYGHNEVNTEYFIWA-D----N---------- 147 (343)
T ss_dssp EEECSTTEEEEEE--TTTEEEEEETTTCCEEEEEECCC----SSCEEEEECCC---CCEEEEE-E----T----------
T ss_pred EEecCCCeEEEEE--ccCceEEeecCCcceeEEeecCC----CCCEEEEEcCCCCCCCEEEEE-e----C----------
Confidence 4566677776654 23567777887877322 21111 123445666662 23332221 1 1
Q ss_pred CceEEEEEEcCCCCeEEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEe--EEcCCCccCcce
Q 035482 173 GKSEVQILTLGSQEWRSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFR--VVEKPDELHRIH 248 (378)
Q Consensus 173 ~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~--~i~lP~~~~~~~ 248 (378)
...+.+|+.+++.-......... ..-..+.+ +|.+...+.. .+.|..+|+.+.+-. .+... +...
T Consensus 148 -dg~i~~wd~~~~~~~~~~~~~~~--~~i~~~~~~pdg~~lasg~~-----dg~i~iwd~~~~~~~~~~~~~~---h~~~ 216 (343)
T 3lrv_A 148 -RGTIGFQSYEDDSQYIVHSAKSD--VEYSSGVLHKDSLLLALYSP-----DGILDVYNLSSPDQASSRFPVD---EEAK 216 (343)
T ss_dssp -TCCEEEEESSSSCEEEEECCCSS--CCCCEEEECTTSCEEEEECT-----TSCEEEEESSCTTSCCEECCCC---TTSC
T ss_pred -CCcEEEEECCCCcEEEEEecCCC--CceEEEEECCCCCEEEEEcC-----CCEEEEEECCCCCCCccEEecc---CCCC
Confidence 14578888888754322111100 00111222 4555444333 578999999876543 23221 1122
Q ss_pred eEEEEe--CCeEEEEEeCCCCceEEEEee
Q 035482 249 YDLVNL--GGCLSAAVPCSSGKEIWVMKE 275 (378)
Q Consensus 249 ~~l~~~--~G~L~~v~~~~~~~~iW~l~~ 275 (378)
..-+.+ +|...+... .....||-+..
T Consensus 217 v~~l~fs~~g~~l~s~~-~~~v~iwd~~~ 244 (343)
T 3lrv_A 217 IKEVKFADNGYWMVVEC-DQTVVCFDLRK 244 (343)
T ss_dssp EEEEEECTTSSEEEEEE-SSBEEEEETTS
T ss_pred EEEEEEeCCCCEEEEEe-CCeEEEEEcCC
Confidence 232333 566655555 33338888764
No 162
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=25.94 E-value=2.7e+02 Score=22.80 Aligned_cols=33 Identities=12% Similarity=0.091 Sum_probs=23.5
Q ss_pred eEEEEEeeCCcEEEEEcCCeEEEEeCCCCcEEE
Q 035482 316 VRVLCLLKNGEILLEYKCRALVSYNPRNEMFKD 348 (378)
Q Consensus 316 ~~~~~~~~~g~vl~~~~~~~l~~yd~~t~~~~~ 348 (378)
+.-+.+..++.++....++.+..||+++++...
T Consensus 187 i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~ 219 (313)
T 3odt_A 187 VRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLR 219 (313)
T ss_dssp EEEEEEEETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEEEcCCCeEEEccCCCeEEEEECCchhhhh
Confidence 455666677776656667889999998876543
No 163
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=25.65 E-value=4.9e+02 Score=25.61 Aligned_cols=196 Identities=11% Similarity=0.147 Sum_probs=93.6
Q ss_pred eCce-EEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEE
Q 035482 99 CKGL-LCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEV 177 (378)
Q Consensus 99 ~~GL-l~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 177 (378)
.+|- |.+.. ....++++||.|++...++............++..|+.. . +.+... ..+
T Consensus 415 ~~g~~lWigt--~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~---lwigt~---------------~Gl 473 (795)
T 4a2l_A 415 EKKSLVYIGT--HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG-N---LWLGTL---------------SAL 473 (795)
T ss_dssp TTTTEEEEEE--TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS-C---EEEEES---------------SCE
T ss_pred CCCCEEEEEe--CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC-C---EEEEec---------------Cce
Confidence 3454 44443 235688889998887776542110111233344444421 1 222211 236
Q ss_pred EEEEcCCCCeEEeCcc--cceee-cCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcC--CC-ccC-cce
Q 035482 178 QILTLGSQEWRSLGQV--NYHML-EAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEK--PD-ELH-RIH 248 (378)
Q Consensus 178 ~Vyss~~~~W~~~~~~--p~~~~-~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~l--P~-~~~-~~~ 248 (378)
.+|+..++.|+..... +.... ..-..++. +|.+ |++.. ..|..||..+.++ .+.. .. ... ...
T Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i 545 (795)
T 4a2l_A 474 VRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL-WIGGE------EGLSVFKQEGLDI-QKASILPVSNVTKLFT 545 (795)
T ss_dssp EEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE-EEEES------SCEEEEEEETTEE-EECCCSCSCGGGGSCE
T ss_pred eEEeCCCCeEEEccccccccccCCceEEEEEECCCCCE-EEEeC------CceEEEeCCCCeE-EEecCCCCCCCCCCee
Confidence 7788888888765422 10110 11112222 3544 55543 4799999998888 4421 11 111 111
Q ss_pred eEEEE-eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcE
Q 035482 249 YDLVN-LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEI 327 (378)
Q Consensus 249 ~~l~~-~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v 327 (378)
..+.+ -+|.|.+.... .|..++.. ...+. .+.. .+++. ...+.-+....+|.+
T Consensus 546 ~~i~~d~~g~lWigT~~----Gl~~~d~~--~~~~~---~~~~--~~gl~---------------~~~i~~i~~d~~g~l 599 (795)
T 4a2l_A 546 NCIYEASNGIIWVGTRE----GFYCFNEK--DKQIK---RYNT--TNGLP---------------NNVVYGILEDSFGRL 599 (795)
T ss_dssp EEEEECTTSCEEEEESS----CEEEEETT--TTEEE---EECG--GGTCS---------------CSCEEEEEECTTSCE
T ss_pred EEEEECCCCCEEEEeCC----CceeECCC--CCcEE---EeCC--CCCCc---------------hhheEEEEECCCCCE
Confidence 22222 24555544321 23233221 12221 1111 11110 012333444557888
Q ss_pred EEEEcCCeEEEEeCCCCcEEEEE
Q 035482 328 LLEYKCRALVSYNPRNEMFKDLL 350 (378)
Q Consensus 328 l~~~~~~~l~~yd~~t~~~~~v~ 350 (378)
++... .++..||+++++++...
T Consensus 600 Wi~t~-~Gl~~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 600 WLSTN-RGISCFNPETEKFRNFT 621 (795)
T ss_dssp EEEET-TEEEEEETTTTEEEEEC
T ss_pred EEEcC-CceEEEcCCCCcEEEcC
Confidence 88875 67999999999887654
No 164
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=25.33 E-value=5.9e+02 Score=26.45 Aligned_cols=205 Identities=11% Similarity=0.072 Sum_probs=96.2
Q ss_pred eeeCceEEEeecCCCceEEEEcccccceee-CCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCce
Q 035482 97 GSCKGLLCLCDSSTKNRLYVYNPFTRNYVE-LPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKS 175 (378)
Q Consensus 97 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 175 (378)
-+.+|-.++..+ ..+.+.|||..|++... +..- .....++.+.+.. .+-+. .. . ..
T Consensus 623 ~s~~~~~l~s~~-~d~~i~vw~~~~~~~~~~~~~h-----~~~v~~~~~s~~~-~~l~s--~~---~-----------d~ 679 (1249)
T 3sfz_A 623 FSQDGQRIASCG-ADKTLQVFKAETGEKLLDIKAH-----EDEVLCCAFSSDD-SYIAT--CS---A-----------DK 679 (1249)
T ss_dssp ECTTSSEEEEEE-TTSCEEEEETTTCCEEEEECCC-----SSCEEEEEECTTS-SEEEE--EE---T-----------TS
T ss_pred ECCCCCEEEEEe-CCCeEEEEECCCCCEEEEeccC-----CCCEEEEEEecCC-CEEEE--Ee---C-----------CC
Confidence 344554444432 45689999999987543 3321 1234456666643 33222 21 1 14
Q ss_pred EEEEEEcCCCCeEEe-CcccceeecCCCcEEE----CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeE
Q 035482 176 EVQILTLGSQEWRSL-GQVNYHMLEAPSQVLV----NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYD 250 (378)
Q Consensus 176 ~~~Vyss~~~~W~~~-~~~p~~~~~~~~~v~~----~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~ 250 (378)
.+.|++..++.-... ...... -..+.+ ++.+...+.. .+.|..+|+.+......-... .....
T Consensus 680 ~v~vwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~sg~~-----d~~v~vwd~~~~~~~~~~~~h---~~~v~ 747 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYDEHSEQ----VNCCHFTNKSNHLLLATGSN-----DFFLKLWDLNQKECRNTMFGH---TNSVN 747 (1249)
T ss_dssp EEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSCCEEEEEET-----TSCEEEEETTSSSEEEEECCC---SSCEE
T ss_pred eEEEEECCCCceEEEEcCCCCc----EEEEEEecCCCceEEEEEeC-----CCeEEEEECCCcchhheecCC---CCCEE
Confidence 688999988743321 111100 011111 1222222222 467889999876543321111 11122
Q ss_pred EEE--eCCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCcEE
Q 035482 251 LVN--LGGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGEIL 328 (378)
Q Consensus 251 l~~--~~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vl 328 (378)
-+. -+|++.+....+....+|.+.... ....+..... .......+ ......+.-+.+..+|+.+
T Consensus 748 ~~~~sp~~~~l~s~s~dg~v~vwd~~~~~------~~~~~~~~~~--~~~~~~~~------~~~~~~v~~~~~s~dg~~l 813 (1249)
T 3sfz_A 748 HCRFSPDDELLASCSADGTLRLWDVRSAN------ERKSINVKRF--FLSSEDPP------EDVEVIVKCCSWSADGDKI 813 (1249)
T ss_dssp EEEECSSTTEEEEEESSSEEEEEEGGGTE------EEEEEECCCC--C--------------CCCCCBCCCCBCTTSSEE
T ss_pred EEEEecCCCEEEEEECCCeEEEEeCCCCc------ccceeccccc--ccccCCcc------ccccceEEEEEECCCCCEE
Confidence 222 256655554433223888775421 1222221100 00000000 0000112234445688888
Q ss_pred EEEcCCeEEEEeCCCCcEEEEE
Q 035482 329 LEYKCRALVSYNPRNEMFKDLL 350 (378)
Q Consensus 329 ~~~~~~~l~~yd~~t~~~~~v~ 350 (378)
+...++.+..||..++......
T Consensus 814 ~~~~~~~v~~~d~~~~~~~~~~ 835 (1249)
T 3sfz_A 814 IVAAKNKVLLFDIHTSGLLAEI 835 (1249)
T ss_dssp EEEETTEEEEEETTTCCEEEEE
T ss_pred EEEcCCcEEEEEecCCCceeEE
Confidence 8877888999999988765544
No 165
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=24.75 E-value=3.2e+02 Score=23.13 Aligned_cols=34 Identities=6% Similarity=0.097 Sum_probs=23.0
Q ss_pred EEEeeCCcEEEEEcC-----------CeEEEEeCCCCcEEEEEEe
Q 035482 319 LCLLKNGEILLEYKC-----------RALVSYNPRNEMFKDLLLH 352 (378)
Q Consensus 319 ~~~~~~g~vl~~~~~-----------~~l~~yd~~t~~~~~v~~~ 352 (378)
+++..+|.+++.... ..++.||++.+.++.+...
T Consensus 234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred eEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECC
Confidence 455567887776532 5689999987666666654
No 166
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=23.90 E-value=3.3e+02 Score=22.95 Aligned_cols=65 Identities=11% Similarity=0.229 Sum_probs=36.1
Q ss_pred ceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEE
Q 035482 101 GLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQIL 180 (378)
Q Consensus 101 GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vy 180 (378)
|-+++... ....+.|||..+++....-... .....++.+.+..+.+-+..- . ...+.+|
T Consensus 85 ~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~s~~---~-------------dg~i~iw 143 (366)
T 3k26_A 85 HPLLAVAG-SRGIIRIINPITMQCIKHYVGH----GNAINELKFHPRDPNLLLSVS---K-------------DHALRLW 143 (366)
T ss_dssp CEEEEEEE-TTCEEEEECTTTCCEEEEEESC----CSCEEEEEECSSCTTEEEEEE---T-------------TSCEEEE
T ss_pred CCEEEEec-CCCEEEEEEchhceEeeeecCC----CCcEEEEEECCCCCCEEEEEe---C-------------CCeEEEE
Confidence 44444432 4568999999988765432211 134455677774344333221 1 1458889
Q ss_pred EcCCCC
Q 035482 181 TLGSQE 186 (378)
Q Consensus 181 ss~~~~ 186 (378)
+.+++.
T Consensus 144 d~~~~~ 149 (366)
T 3k26_A 144 NIQTDT 149 (366)
T ss_dssp ETTTTE
T ss_pred EeecCe
Confidence 988774
No 167
>1ugj_A Riken cDNA 2310057J16 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.41.1.3
Probab=23.76 E-value=1.6e+02 Score=22.31 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=46.2
Q ss_pred eEEEeecCC-CceEEEEcccccceeeCCC-CC-CCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEE
Q 035482 102 LLCLCDSST-KNRLYVYNPFTRNYVELPK-ST-EFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQ 178 (378)
Q Consensus 102 Ll~~~~~~~-~~~~~V~NP~T~~~~~LP~-~~-~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 178 (378)
+|++++..- -..+|.+||.+.+..+|-. .| .........-+-||..++.|+.|--... ...+.
T Consensus 57 lILfrd~~~qfRalY~~~~~~e~~~Ki~G~GP~~i~~~mV~~~~KYdSg~K~F~~i~sk~~--------------s~tvD 122 (141)
T 1ugj_A 57 LILFRDSSCQFRALYTLSGETEELSRLAGYGPRTVTPAMVEGIYKYNSDRKRFTQIPAKTM--------------SMSVD 122 (141)
T ss_dssp EEEESSSSCSEEEEEEECTTSSCEEEEESSSCSEECTTTEEEEEEEETTTTEEEECSSSSC--------------CTTCS
T ss_pred EEEEecCCCceEEEEEEeCCCceEEEEECCCcCcccHHHHHHHhccCCCCceecccCcccc--------------ceeEE
Confidence 456665321 1468999999998877732 22 2222356666788999899988852111 13456
Q ss_pred EEEcCCCCeEE
Q 035482 179 ILTLGSQEWRS 189 (378)
Q Consensus 179 Vyss~~~~W~~ 189 (378)
.++....-|..
T Consensus 123 Avtl~~~~w~~ 133 (141)
T 1ugj_A 123 AFTIQGHLWQS 133 (141)
T ss_dssp EEEECSTTTSC
T ss_pred EEEEhhHhhcC
Confidence 67777777764
No 168
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=23.75 E-value=5.3e+02 Score=25.35 Aligned_cols=34 Identities=26% Similarity=0.378 Sum_probs=25.3
Q ss_pred eEEEEEeeCCcEEEEEcCCeEEEEeCCCCcEEEEE
Q 035482 316 VRVLCLLKNGEILLEYKCRALVSYNPRNEMFKDLL 350 (378)
Q Consensus 316 ~~~~~~~~~g~vl~~~~~~~l~~yd~~t~~~~~v~ 350 (378)
+.-+....+|.+++-.. .+++.||+++++++.+.
T Consensus 454 v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~ 487 (795)
T 4a2l_A 454 VYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIE 487 (795)
T ss_dssp EEEEEECSSSCEEEEES-SCEEEEETTTTEEEECC
T ss_pred eEEEEECCCCCEEEEec-CceeEEeCCCCeEEEcc
Confidence 34445556788888877 67999999999887654
No 169
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=23.01 E-value=31 Score=25.83 Aligned_cols=29 Identities=14% Similarity=0.126 Sum_probs=15.8
Q ss_pred EEEEEcCCeEEEEeCCCCcEEEEEEeCCC
Q 035482 327 ILLEYKCRALVSYNPRNEMFKDLLLHGTP 355 (378)
Q Consensus 327 vl~~~~~~~l~~yd~~t~~~~~v~~~~~~ 355 (378)
|+.......++.||.++++|++.+++|..
T Consensus 26 Il~~a~~v~vY~f~~~~~~W~K~~iEGtL 54 (127)
T 2qkl_A 26 IIDIASHVAVYQFDVGSQKWLKTSIEGTF 54 (127)
T ss_dssp EEEEEEEEEEECC------CCEEEEEEEE
T ss_pred HhccCCeEEEEEecCCCCceEEcCcEEEE
Confidence 44444445577788889999999888763
No 170
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=22.98 E-value=3.3e+02 Score=22.75 Aligned_cols=61 Identities=11% Similarity=0.043 Sum_probs=32.2
Q ss_pred ECCeEEEEeccCCCCCCcEEEEEECCCceEe-EEcCCCccCcceeEEE-EeCCeEEEEEeCCCCceEEEEe
Q 035482 206 VNGRLHWCTWPRYRGPSRLLISFDIADEQFR-VVEKPDELHRIHYDLV-NLGGCLSAAVPCSSGKEIWVMK 274 (378)
Q Consensus 206 ~~G~lyw~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~l~-~~~G~L~~v~~~~~~~~iW~l~ 274 (378)
.++.+|..... ...|..+|+.+.+.. .++++.... ...+. .-+|+..++..... ..|++++
T Consensus 9 ~~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~~~v~~~~~-~~i~~~d 71 (349)
T 1jmx_B 9 AGHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPDKFG--PGTAMMAPDNRTAYVLNNHY-GDIYGID 71 (349)
T ss_dssp TTCEEEEEEET-----TTEEEEEETTTTEEEEEEECSSCCS--SCEEEECTTSSEEEEEETTT-TEEEEEE
T ss_pred CCCEEEEEeCC-----CCeEEEEECCCCcEEEEEecCCCCC--CceeEECCCCCEEEEEeCCC-CcEEEEe
Confidence 35566555544 579999999887653 456654111 11222 23566444443222 2555554
No 171
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=22.60 E-value=3.3e+02 Score=22.58 Aligned_cols=30 Identities=13% Similarity=0.123 Sum_probs=21.1
Q ss_pred EEEeeCCcEEEEE-cCCeEEEEeCCCCcEEE
Q 035482 319 LCLLKNGEILLEY-KCRALVSYNPRNEMFKD 348 (378)
Q Consensus 319 ~~~~~~g~vl~~~-~~~~l~~yd~~t~~~~~ 348 (378)
+++..+|+.++.. .++.+..||+++++...
T Consensus 285 ~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 285 VNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEECTTSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred EEECCCCCEEEEEcCCCcEEEEECcCCcEEE
Confidence 4556678765554 45789999999987544
No 172
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=22.26 E-value=5.5e+02 Score=24.94 Aligned_cols=190 Identities=13% Similarity=0.059 Sum_probs=90.7
Q ss_pred eeeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceE
Q 035482 97 GSCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSE 176 (378)
Q Consensus 97 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 176 (378)
-+.+|-.++..+ ....+.|||..|++....-... ......+.+.+.. .+ ++ ... . ...
T Consensus 63 ~s~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~s~~~-~~-l~-~~~---~-----------dg~ 120 (814)
T 3mkq_A 63 FIARKNWIIVGS-DDFRIRVFNYNTGEKVVDFEAH----PDYIRSIAVHPTK-PY-VL-SGS---D-----------DLT 120 (814)
T ss_dssp EEGGGTEEEEEE-TTSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSS-SE-EE-EEE---T-----------TSE
T ss_pred EeCCCCEEEEEe-CCCeEEEEECCCCcEEEEEecC----CCCEEEEEEeCCC-CE-EE-EEc---C-----------CCE
Confidence 344554433332 3578999999988765422211 1234455666643 22 22 211 1 146
Q ss_pred EEEEEcCCC-CeEEe-CcccceeecCCCcEEE---CCeEEEEeccCCCCCCcEEEEEECCCceEeE-EcCCCccCcceeE
Q 035482 177 VQILTLGSQ-EWRSL-GQVNYHMLEAPSQVLV---NGRLHWCTWPRYRGPSRLLISFDIADEQFRV-VEKPDELHRIHYD 250 (378)
Q Consensus 177 ~~Vyss~~~-~W~~~-~~~p~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~ 250 (378)
+.+|+..++ ..... ..... .-..+.+ +|.....+.. .+.|..+|+.+..-.. +..+.. ....
T Consensus 121 i~vw~~~~~~~~~~~~~~~~~----~v~~~~~~p~~~~~l~~~~~-----dg~v~vwd~~~~~~~~~~~~~~~---~~v~ 188 (814)
T 3mkq_A 121 VKLWNWENNWALEQTFEGHEH----FVMCVAFNPKDPSTFASGCL-----DRTVKVWSLGQSTPNFTLTTGQE---RGVN 188 (814)
T ss_dssp EEEEEGGGTSEEEEEEECCSS----CEEEEEEETTEEEEEEEEET-----TSEEEEEETTCSSCSEEEECCCT---TCCC
T ss_pred EEEEECCCCceEEEEEcCCCC----cEEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCcceeEEecCCC---CCEE
Confidence 788888765 22211 11010 0111222 3444444433 4789999986643322 222210 1112
Q ss_pred EEEe----CCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCC
Q 035482 251 LVNL----GGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNG 325 (378)
Q Consensus 251 l~~~----~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 325 (378)
.+.+ +|.+.++... ++. .+|.++. .....++... ...+.-+.+..+|
T Consensus 189 ~~~~~~~~~~~~l~~~~~-dg~i~~~d~~~------~~~~~~~~~~---------------------~~~v~~~~~~~~~ 240 (814)
T 3mkq_A 189 YVDYYPLPDKPYMITASD-DLTIKIWDYQT------KSCVATLEGH---------------------MSNVSFAVFHPTL 240 (814)
T ss_dssp EEEECCSTTCCEEEEECT-TSEEEEEETTT------TEEEEEEECC---------------------SSCEEEEEECSSS
T ss_pred EEEEEECCCCCEEEEEeC-CCEEEEEECCC------CcEEEEEcCC---------------------CCCEEEEEEcCCC
Confidence 2222 5555555443 333 7775532 1222222210 0124455666677
Q ss_pred cEEEEEc-CCeEEEEeCCCCcEEE
Q 035482 326 EILLEYK-CRALVSYNPRNEMFKD 348 (378)
Q Consensus 326 ~vl~~~~-~~~l~~yd~~t~~~~~ 348 (378)
.+++... ++.+..||+.+++...
T Consensus 241 ~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 241 PIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEE
Confidence 7666654 5778889998876544
No 173
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=22.14 E-value=3.9e+02 Score=23.22 Aligned_cols=107 Identities=9% Similarity=0.094 Sum_probs=54.2
Q ss_pred eeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEE
Q 035482 98 SCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEV 177 (378)
Q Consensus 98 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 177 (378)
+.+|-.++... ....+.|||..+++....-.... ....++.+.+.. .+ ++ ... . ...+
T Consensus 106 ~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~~~~-~~-l~-s~s---~-----------d~~i 163 (420)
T 3vl1_A 106 KLQMRRFILGT-TEGDIKVLDSNFNLQREIDQAHV----SEITKLKFFPSG-EA-LI-SSS---Q-----------DMQL 163 (420)
T ss_dssp CSSSCEEEEEE-TTSCEEEECTTSCEEEEETTSSS----SCEEEEEECTTS-SE-EE-EEE---T-----------TSEE
T ss_pred ecCCCEEEEEE-CCCCEEEEeCCCcceeeeccccc----CccEEEEECCCC-CE-EE-EEe---C-----------CCeE
Confidence 34554444332 45789999999888766533221 344556777753 32 22 211 1 1468
Q ss_pred EEEEcCCCCe-EEeCcccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceE
Q 035482 178 QILTLGSQEW-RSLGQVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQF 235 (378)
Q Consensus 178 ~Vyss~~~~W-~~~~~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~ 235 (378)
.+|+..++.= +......... ..+.+ +|.....+.. .+.|..+|+.+.+-
T Consensus 164 ~iwd~~~~~~~~~~~~h~~~v----~~~~~~~~~~~l~s~~~-----d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 164 KIWSVKDGSNPRTLIGHRATV----TDIAIIDRGRNVLSASL-----DGTIRLWECGTGTT 215 (420)
T ss_dssp EEEETTTCCCCEEEECCSSCE----EEEEEETTTTEEEEEET-----TSCEEEEETTTTEE
T ss_pred EEEeCCCCcCceEEcCCCCcE----EEEEEcCCCCEEEEEcC-----CCcEEEeECCCCce
Confidence 8999887631 1111111000 11111 3443333333 46788999987654
No 174
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=21.78 E-value=4.5e+02 Score=23.79 Aligned_cols=118 Identities=12% Similarity=0.144 Sum_probs=0.0
Q ss_pred cCCCcEEEC-----CeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCCccCcceeEEEEeCCeEEEEEeCCCCc--eEE
Q 035482 199 EAPSQVLVN-----GRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPDELHRIHYDLVNLGGCLSAAVPCSSGK--EIW 271 (378)
Q Consensus 199 ~~~~~v~~~-----G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~l~~~~G~L~~v~~~~~~~--~iW 271 (378)
....++.++ |.|||.... ..|..+|+++.+...+.. .......-.+..+|.|++........ .+.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~------~~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR------DAFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGDMVVVDDQSSDTNTGIY 210 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT------SCEEEEETTTTEEEEECC--CCSCEEEEEECTTCCEEEEECCSCTTSEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCC------CCEEEEECCCCEEEEeec--CCCCccEEEECCCCCEEEEcCCCCcccceEE
Q ss_pred EEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEee-CCcEEEEEc-CCeEEEEeCCCCcE-EE
Q 035482 272 VMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLK-NGEILLEYK-CRALVSYNPRNEMF-KD 348 (378)
Q Consensus 272 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~vl~~~~-~~~l~~yd~~t~~~-~~ 348 (378)
.+...+ ...+..... .+..|.+ +++.. +|.+++... .++++.||+++++. +.
T Consensus 211 ~~~~~~-~~~~~~~~~-~~~~P~g-----------------------iavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~ 265 (433)
T 4hw6_A 211 LFTRAS-GFTERLSLC-NARGAKT-----------------------CAVHPQNGKIYYTRYHHAMISSYDPATGTLTEE 265 (433)
T ss_dssp EECGGG-TTCCEEEEE-ECSSBCC-----------------------CEECTTTCCEEECBTTCSEEEEECTTTCCEEEE
T ss_pred EEECCC-Ceecccccc-ccCCCCE-----------------------EEEeCCCCeEEEEECCCCEEEEEECCCCeEEEE
Q ss_pred E
Q 035482 349 L 349 (378)
Q Consensus 349 v 349 (378)
+
T Consensus 266 ~ 266 (433)
T 4hw6_A 266 E 266 (433)
T ss_dssp E
T ss_pred E
No 175
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=21.13 E-value=4e+02 Score=22.96 Aligned_cols=29 Identities=7% Similarity=-0.062 Sum_probs=18.3
Q ss_pred eEEEEEee-CCcEEEEE-cCCeEEEEeCCCC
Q 035482 316 VRVLCLLK-NGEILLEY-KCRALVSYNPRNE 344 (378)
Q Consensus 316 ~~~~~~~~-~g~vl~~~-~~~~l~~yd~~t~ 344 (378)
+.-+++.. ++.+|+.. .++.+..||+.+.
T Consensus 314 V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 314 VTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 34455653 67777654 4678999998664
No 176
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=21.06 E-value=3.7e+02 Score=22.48 Aligned_cols=107 Identities=15% Similarity=0.211 Sum_probs=54.0
Q ss_pred ceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEeC
Q 035482 112 NRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSLG 191 (378)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~ 191 (378)
..++.+||.|++...+. .. ...-++.+++..+ .+..... ....+ ....+.+|+...+......
T Consensus 169 ~~v~~~d~~~g~~~~~~-~~-----~~p~gl~~spdg~--~lyv~~~-~~~~~--------~~~~i~~~~~~~~~l~~~~ 231 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-DL-----DHPNGLAFSPDEQ--TLYVSQT-PEQGH--------GSVEITAFAWRDGALHDRR 231 (305)
T ss_dssp EEEEEECSSSCCCEEEE-EE-----SSEEEEEECTTSS--EEEEEEC-CC-----------CCCEEEEEEEETTEEEEEE
T ss_pred CeEEEEcCCCCcEEEEe-cC-----CCCcceEEcCCCC--EEEEEec-CCcCC--------CCCEEEEEEecCCCccCCe
Confidence 46888888888766553 11 1233566666432 1222211 10000 0135677776654321111
Q ss_pred cccceeecCCCcEEE--CCeEEEEeccCCCCCCcEEEEEECCCceEeEEcCCC
Q 035482 192 QVNYHMLEAPSQVLV--NGRLHWCTWPRYRGPSRLLISFDIADEQFRVVEKPD 242 (378)
Q Consensus 192 ~~p~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~il~fD~~~e~~~~i~lP~ 242 (378)
...........++.+ +|.+ |++.. ..|..||.+.+....+.+|.
T Consensus 232 ~~~~~~~~~pdgi~~d~~G~l-wv~~~------~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 232 HFASVPDGLPDGFCVDRGGWL-WSSSG------TGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp EEECCSSSCCCSEEECTTSCE-EECCS------SEEEEECTTSCEEEEEECSS
T ss_pred EEEECCCCCCCeEEECCCCCE-EEecC------CcEEEECCCCCEEEEEECCC
Confidence 000000112234444 5774 55443 46999999999888888875
No 177
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=20.56 E-value=4.1e+02 Score=22.92 Aligned_cols=232 Identities=6% Similarity=-0.038 Sum_probs=0.0
Q ss_pred CCcEEEEecCCCCcCCcceeeeccCCCCceeEEeeeC-ceEEEeecCCCceEEEEcccccc------eeeCCCCCCCCCc
Q 035482 64 RNQLYSFELSSRDEDNQTVHQIRVPALPEFDVVGSCK-GLLCLCDSSTKNRLYVYNPFTRN------YVELPKSTEFQTQ 136 (378)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-GLl~~~~~~~~~~~~V~NP~T~~------~~~LP~~~~~~~~ 136 (378)
.+.+...++............+...-.+-..+.-+.+ |-+++... ....+.|||..+++ ............
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~- 165 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGG-NNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV- 165 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEEC-SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS-
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEc-CCCeEEEEECCCCccccccccccccccccCCC-
Q ss_pred cEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEEEEEEcCCCCeEEeCcccc-----eeecCCCcEEECC-eE
Q 035482 137 DVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEVQILTLGSQEWRSLGQVNY-----HMLEAPSQVLVNG-RL 210 (378)
Q Consensus 137 ~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p~-----~~~~~~~~v~~~G-~l 210 (378)
.....+.+.+..+.+-+..-.. ..+.+|+.+++.-...-..+. ......-...-+| .+
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~d----------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSS----------------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTR 229 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSS----------------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTE
T ss_pred CCeeEEEeCCCCCcEEEEEcCC----------------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCE
Q ss_pred EEEeccCCCCCCc---EEEEEECCCceEeEEcCC-CccCcceeEEEEe-CCeEEEEEeCCCCceEEEEeeCCCCCceeeE
Q 035482 211 HWCTWPRYRGPSR---LLISFDIADEQFRVVEKP-DELHRIHYDLVNL-GGCLSAAVPCSSGKEIWVMKEYDVKESWIKE 285 (378)
Q Consensus 211 yw~~~~~~~~~~~---~il~fD~~~e~~~~i~lP-~~~~~~~~~l~~~-~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~ 285 (378)
...+.. .. .|..+|+.+..-....+. ............- +|.+.+....+....||.++. ..-...
T Consensus 230 l~~~~~-----d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~----~~~~~~ 300 (416)
T 2pm9_A 230 VATATG-----SDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES----AEQLSQ 300 (416)
T ss_dssp EEEEEC-----CSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS----CCEEEE
T ss_pred EEEEEC-----CCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC----Ccccee
Q ss_pred EEEccCCCCCccccccCccccccccccCceeEEEEEeeCC-cEEEEEc-CCeEEEEeCCCCc
Q 035482 286 YNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNG-EILLEYK-CRALVSYNPRNEM 345 (378)
Q Consensus 286 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~vl~~~~-~~~l~~yd~~t~~ 345 (378)
..-.. ..+.-+.+..++ .+++... ++.+..||+++.+
T Consensus 301 ~~~~~-----------------------~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 301 FPARG-----------------------NWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EECSS-----------------------SCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred ecCCC-----------------------CceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
No 178
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=20.27 E-value=4e+02 Score=22.62 Aligned_cols=95 Identities=15% Similarity=0.177 Sum_probs=49.7
Q ss_pred CcEEEEEECCCceEeE-EcCCCccCcceeEEEEe-CCeEEEEEeCCCCceEEEEeeCCCCCceeeEEEEccCCCCCcccc
Q 035482 222 SRLLISFDIADEQFRV-VEKPDELHRIHYDLVNL-GGCLSAAVPCSSGKEIWVMKEYDVKESWIKEYNIGIHVPRGLEQD 299 (378)
Q Consensus 222 ~~~il~fD~~~e~~~~-i~lP~~~~~~~~~l~~~-~G~L~~v~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 299 (378)
...|..+|+.+..... +.... ..-..+... +|++.+....+....||-+... ....++.-.
T Consensus 163 d~~i~~wd~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~------~~~~~~~~h-------- 225 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFTGHT---GDVMSLSLAPDTRLFVSGACDASAKLWDVREG------MCRQTFTGH-------- 225 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCS---SCEEEEEECTTSSEEEEEETTSCEEEEETTTC------SEEEEECCC--------
T ss_pred CCcEEEEECCCCcEEEEEcCCC---CceEEEEECCCCCEEEEEeCCCcEEEEECCCC------eeEEEEcCC--------
Confidence 4688999998765432 22111 111122222 5666655554333488876431 122222210
Q ss_pred ccCccccccccccCceeEEEEEeeCCcEEEEEc-CCeEEEEeCCCCcE
Q 035482 300 LSQSFRDSKFFRNRSFVRVLCLLKNGEILLEYK-CRALVSYNPRNEMF 346 (378)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~g~vl~~~~-~~~l~~yd~~t~~~ 346 (378)
...+.-+++..+|..++... ++.+..||+++++.
T Consensus 226 -------------~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 226 -------------ESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp -------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred -------------cCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 01244566666777766644 56788888887653
No 179
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=20.17 E-value=4.2e+02 Score=22.81 Aligned_cols=195 Identities=9% Similarity=-0.011 Sum_probs=88.6
Q ss_pred eeCceEEEeecCCCceEEEEcccccceeeCCCCCCCCCccEEEEEEEeCCCCCeEEEEEEEEecCCCCcccccCCCceEE
Q 035482 98 SCKGLLCLCDSSTKNRLYVYNPFTRNYVELPKSTEFQTQDVVFGFGFHPTTNKYKVVKIDYCRKTHGNHRYYRGYGKSEV 177 (378)
Q Consensus 98 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 177 (378)
+-++.|+... ....+.|||..|++.................++.+.+.. .+- + ... . ...+
T Consensus 91 s~d~~l~~~s--~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l-~-sgs---~-----------d~~i 151 (344)
T 4gqb_B 91 VGERGILVAS--DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQA-V-SGS---K-----------DICI 151 (344)
T ss_dssp ETTTEEEEEE--TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEE-E-EEE---T-----------TSCE
T ss_pred eCCCeEEEEE--CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEE-E-EEe---C-----------CCeE
Confidence 3456555443 457899999999876543321111111234456666642 322 2 111 1 1457
Q ss_pred EEEEcCCCCeE-EeCcccceeecCCCcEEE--CCe-EEEEeccCCCCCCcEEEEEECCCceEe-EEcCCCccCcceeEEE
Q 035482 178 QILTLGSQEWR-SLGQVNYHMLEAPSQVLV--NGR-LHWCTWPRYRGPSRLLISFDIADEQFR-VVEKPDELHRIHYDLV 252 (378)
Q Consensus 178 ~Vyss~~~~W~-~~~~~p~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~l~ 252 (378)
.+++.+++.=. ........ -..+.+ +|. +...+.. .+.|..+|+.+.+-. .+..+.... ....+.
T Consensus 152 ~iwd~~~~~~~~~~~~h~~~----V~~~~~~~~~~~~l~s~s~-----D~~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~ 221 (344)
T 4gqb_B 152 KVWDLAQQVVLSSYRAHAAQ----VTCVAASPHKDSVFLSCSE-----DNRILLWDTRCPKPASQIGCSAPGY-LPTSLA 221 (344)
T ss_dssp EEEETTTTEEEEEECCCSSC----EEEEEECSSCTTEEEEEET-----TSCEEEEETTSSSCEEECC----CC-CEEEEE
T ss_pred EEEECCCCcEEEEEcCcCCc----eEEEEecCCCCCceeeecc-----ccccccccccccceeeeeecceeec-cceeee
Confidence 88888876321 11110000 011111 232 2222222 467888999875432 232222111 111222
Q ss_pred Ee--CCeEEEEEeCCCCc-eEEEEeeCCCCCceeeEEEEccCCCCCccccccCccccccccccCceeEEEEEeeCCc-EE
Q 035482 253 NL--GGCLSAAVPCSSGK-EIWVMKEYDVKESWIKEYNIGIHVPRGLEQDLSQSFRDSKFFRNRSFVRVLCLLKNGE-IL 328 (378)
Q Consensus 253 ~~--~G~L~~v~~~~~~~-~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-vl 328 (378)
.. ++++.+.... ++. .||-++.. ....++.-. ...+.-+++..+|. ++
T Consensus 222 ~~p~~~~~l~sg~~-dg~v~~wd~~~~------~~~~~~~~h---------------------~~~v~~v~fsp~g~~~l 273 (344)
T 4gqb_B 222 WHPQQSEVFVFGDE-NGTVSLVDTKST------SCVLSSAVH---------------------SQCVTGLVFSPHSVPFL 273 (344)
T ss_dssp ECSSCTTEEEEEET-TSEEEEEESCC--------CCEEEECC---------------------SSCEEEEEECSSSSCCE
T ss_pred ecCCCCcceEEecc-CCcEEEEECCCC------cEEEEEcCC---------------------CCCEEEEEEccCCCeEE
Confidence 22 3455544433 333 88865431 111222110 01234456666664 44
Q ss_pred EE-EcCCeEEEEeCCCCcEEEE
Q 035482 329 LE-YKCRALVSYNPRNEMFKDL 349 (378)
Q Consensus 329 ~~-~~~~~l~~yd~~t~~~~~v 349 (378)
.. ..++.+..||.+++++.++
T Consensus 274 asgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 274 ASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp EEEETTSCEEEECTTCCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEE
Confidence 43 3467799999999876543
Done!